RchiOBHm_Chr1g0361131

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000139
Physical Location & Seq
Forward (+)
53111595 .. 53112836
1242 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58604

Sequence Viewer

Length: 1242 bp
ATGTTGAAGAAAAAGAAGCATCTTGATCTCCAACAACTCCCTGAACATGTTGTACTCAGCATTCTCTGCCGGCTGCCAGTGAAGTCCTTGATCCGCTTCACTTGTGTCTCAAAACGGTGGCGTTATGTTATAATTTCCGACCACCAATTTGGCAACTCCCATTTTCAACTAGCAGCATCTCAGCTCCGTCATAATGTCCTCATCTCCAGGTCCCCTGACTACATTTCAGAAGGTACACAATTTCAATCCTTAGAAGATAACTTTTCGATCAAAAATCTCACCTGCCCATTCCAGCGGTGTAGCACAATTCAAGTAATGGGCTCTTGCAATGGTTTGGTAGTTTTAGCTAATTTCCATCCCAATGTTTTGAGCTATTGGCCTTGTTGTCTTCGCGATCGTTATAACATTTTAGTAATGCGGAACCCATCAACTGGATTCTTCCGCAAGATACCTTATCCAAATTTTCAAATTGGGAGCAAAAAATGGACACTTGAATATAAAAAGATCCAAGTGTATTATGGTTTTGGTCAAGTGTCGGCCTCCGATGACTACAAACTTGTGGTGATACTAAATTATGGTGGTTTCATGGAAGTACGTGTGTTCTCAGTCAGAGCCAACTGTTGGAAAGTTGTTAAAGCTCCTTACTTGTCACCATACCGCCCCTGGTCTGAAGAATTGGGGACATACTCAAATGGAGCAATTCATTGGGTCAGTCTCCATGAACCTGGTTTTTTGGAGCCACCTGTCTATGCTTTTGACCTCGCAAATGAGGAGTTTCGGGAAATGCCATTGCCTGTTCTTAGCCATAATGAATATGGCATGAAAATGACGCAAACAAGAACTCCAGTTCTTTTAGGAGGATGTCTTTGTGTGATGTTTCAGGATGCTGAAAAGAACAGTGAATTTTGGGCGATGAAAGAGTATGGGCTGCCTGAATCTTGGGTTAAACTCTTTGGGTTTAAGCTACGTGATTTACCGGATGTGTTTAATTCATTCTTTAGCGTCTTTTTCTGGAATCCTATTTTCATTGCTGAAGACGGTACAGTTGTGATCAAAGTGCCTTCCAAGATGGAGGTGATCAGGTTTAAATGCCGTAAAGAAGAGAAGCCAGTCTGCACCGACCGGTACCGTCTTGAGGAGCTGCTGCCATGTAAGGATGACAATGATCCCTGTAACCACAAAAAAAAGTATCTATTTAGTGCCATTTTGTATGATGAAACTCTAGTTTCGATACCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

413

Amino Acids

48.12

Weight (kDa)

8.71

Isoelectric Point (pI)

37.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 10 - 46 1.6e-09 F-box domain
F-box-like PF12937 11 - 47 2.5e-07 F-box-like
FBA_3 PF08268 86 - 315 1.5e-08 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 131, 402
AarI CACCTGC 1 cut(s) 290
Acc36I ACCTGC 1 cut(s) 290
Acc65I GGTACC 1 cut(s) 1125
AccB1I GGYRCC 1 cut(s) 1125
AccB7I CCANNNNNTGG 2 cut(s) 431, 621
AccII CGCG 1 cut(s) 393
AciI CCGC 5 cut(s) 94, 295, 418, 442, 658
AclWI GGATC 3 cut(s) 85, 499, 1160
AcsI RAATTY 2 cut(s) 460, 902
AcuI CTGAAG 2 cut(s) 690, 1053
AfaI GTAC 5 cut(s) 54, 235, 594, 1042, 1127
AfiI CCNNNNNNNGG 3 cut(s) 431, 621, 1135
AflIII ACRYGT 2 cut(s) 46, 595
AgeI ACCGGT 1 cut(s) 1122
AgsI TTSAA 6 cut(s) 7, 167, 245, 311, 467, 494
AjnI CCWGG 3 cut(s) 206, 662, 724
AluBI AGCT 6 cut(s) 184, 347, 372, 638, 964, 1141
AluI AGCT 6 cut(s) 184, 347, 372, 638, 964, 1141
Alw26I GTCTC 2 cut(s) 112, 719
AlwI GGATC 3 cut(s) 85, 499, 1160
AoxI GGCC 2 cut(s) 377, 537
ApeKI GCWGC 5 cut(s) 73, 173, 928, 1141, 1144
ApoI RAATTY 2 cut(s) 460, 902
ArsI GACNNNNNNTTYG 2 cut(s) 131, 163
AsiGI ACCGGT 1 cut(s) 1122
Asp718I GGTACC 1 cut(s) 1125
AspS9I GGNCC 1 cut(s) 210
AsuHPI GGTGA 4 cut(s) 271, 574, 642, 1087
AvaII GGWCC 1 cut(s) 210
BaeI ACNNNNGTAYC 2 cut(s) 1032, 1065
BanI GGYRCC 1 cut(s) 1125
BanII GRGCYC 1 cut(s) 323
BbsI GAAGAC 2 cut(s) 380, 1041
BbvI GCAGC 5 cut(s) 60, 185, 915, 1128, 1131
BccI CCATC 3 cut(s) 363, 433, 1063
BceAI ACGGC 1 cut(s) 1077
BciT130I CCWGG 3 cut(s) 208, 664, 726
BclI TGATCA 2 cut(s) 1050, 1077
BcoDI GTCTC 2 cut(s) 112, 719
BfaI CTAG 2 cut(s) 170, 1223
BfuAI ACCTGC 1 cut(s) 290
BisI GCNGC 5 cut(s) 74, 174, 929, 1142, 1145
BlsI GCNGC 5 cut(s) 75, 175, 930, 1143, 1146
Bme1390I CCNGG 3 cut(s) 208, 664, 726
Bme18I GGWCC 1 cut(s) 210
BmgT120I GGNCC 1 cut(s) 210
BmiI GGNNCC 4 cut(s) 212, 422, 738, 1127
BmrFI CCNGG 3 cut(s) 208, 664, 726
BmsI GCATC 3 cut(s) 28, 185, 874
BpiI GAAGAC 2 cut(s) 380, 1041
BpmI CTGGAG 2 cut(s) 190, 828
BpuEI CTTGAG 1 cut(s) 1154
BsaAI YACGTR 2 cut(s) 596, 968
BsaJI CCNNGG 1 cut(s) 662
BsaWI WCCGGW 2 cut(s) 976, 1122
BsaXI ACNNNNNCTCC 2 cut(s) 826, 856
Bsc4I CCNNNNNNNGG 3 cut(s) 431, 621, 1135
Bse118I RCCGGY 2 cut(s) 69, 1122
Bse1I ACTGG 4 cut(s) 77, 436, 845, 1109
Bse3DI GCAATG 3 cut(s) 334, 788, 1026
BseBI CCWGG 3 cut(s) 208, 664, 726
BseDI CCNNGG 1 cut(s) 662
BseGI GGATG 5 cut(s) 355, 866, 889, 985, 1162
BseLI CCNNNNNNNGG 3 cut(s) 431, 621, 1135
BseMI GCAATG 3 cut(s) 334, 788, 1026
BseMII CTCAG 3 cut(s) 70, 194, 618
BseNI ACTGG 4 cut(s) 77, 436, 845, 1109
BseRI GAGGAG 2 cut(s) 785, 1151
BseXI GCAGC 5 cut(s) 60, 185, 915, 1128, 1131
BsgI GTGCAG 1 cut(s) 1099
Bsh1236I CGCG 1 cut(s) 393
Bsh1285I CGRYCG 2 cut(s) 397, 1123
BshFI GGCC 2 cut(s) 379, 539
BshNI GGYRCC 1 cut(s) 1125
BshTI ACCGGT 1 cut(s) 1122
BsiEI CGRYCG 2 cut(s) 397, 1123
BsiSI CCGG 3 cut(s) 70, 977, 1123
BslFI GGGAC 2 cut(s) 196, 694
BslI CCNNNNNNNGG 3 cut(s) 431, 621, 1135
BsmAI GTCTC 2 cut(s) 112, 719
BsmFI GGGAC 2 cut(s) 196, 694
BsmI GAATGC 1 cut(s) 60
BsnI GGCC 2 cut(s) 379, 539
Bsp1286I GDGCHC 1 cut(s) 323
Bsp143I GATC 8 cut(s) 25, 90, 267, 394, 504, 1050, 1077, 1165
Bsp68I TCGCGA 1 cut(s) 393
BspACI CCGC 5 cut(s) 94, 295, 418, 442, 658
BspANI GGCC 2 cut(s) 379, 539
BspCNI CTCAG 3 cut(s) 69, 193, 617
BspFNI CGCG 1 cut(s) 393
BspLI GGNNCC 4 cut(s) 212, 422, 738, 1127
BspMI ACCTGC 1 cut(s) 290
BspPI GGATC 3 cut(s) 85, 499, 1160
BspT107I GGYRCC 1 cut(s) 1125
BsrDI GCAATG 3 cut(s) 334, 788, 1026
BsrFI RCCGGY 2 cut(s) 69, 1122
BsrI ACTGG 4 cut(s) 77, 436, 845, 1109
BssAI RCCGGY 2 cut(s) 69, 1122
BssECI CCNNGG 1 cut(s) 662
BssMI GATC 8 cut(s) 25, 90, 267, 394, 504, 1050, 1077, 1165
Bst2UI CCWGG 3 cut(s) 208, 664, 726
Bst4CI ACNGT 6 cut(s) 117, 620, 899, 1040, 1045, 1130
Bst6I CTCTTC 1 cut(s) 1095
BstAPI GCANNNNNTGC 1 cut(s) 66
BstBAI YACGTR 2 cut(s) 596, 968
BstC8I GCNNGC 1 cut(s) 71
BstDEI CTNAG 5 cut(s) 56, 180, 250, 604, 800
BstF5I GGATG 5 cut(s) 355, 866, 889, 985, 1162
BstFNI CGCG 1 cut(s) 393
BstKTI GATC 8 cut(s) 28, 93, 270, 397, 507, 1053, 1080, 1168
BstMAI GTCTC 2 cut(s) 112, 719
BstMBI GATC 8 cut(s) 25, 90, 267, 394, 504, 1050, 1077, 1165
BstMCI CGRYCG 2 cut(s) 397, 1123
BstMWI GCNNNNNNNGC 1 cut(s) 66
BstNI CCWGG 3 cut(s) 208, 664, 726
BstNSI RCATGY 1 cut(s) 50
BstSCI CCNGG 3 cut(s) 206, 662, 724
BstUI CGCG 1 cut(s) 393
BstV1I GCAGC 5 cut(s) 60, 185, 915, 1128, 1131
BstV2I GAAGAC 2 cut(s) 380, 1041
BstX2I RGATCY 1 cut(s) 504
BstXI CCANNNNNNTGG 2 cut(s) 149, 725
BstYI RGATCY 1 cut(s) 504
BsuRI GGCC 2 cut(s) 379, 539
BtgZI GCGATG 1 cut(s) 926
BtsCI GGATG 5 cut(s) 355, 866, 889, 985, 1162
BtsIMutI CAGTG 2 cut(s) 84, 904
BtuMI TCGCGA 1 cut(s) 393
BveI ACCTGC 1 cut(s) 290
Cac8I GCNNGC 1 cut(s) 71
Cfr10I RCCGGY 2 cut(s) 69, 1122
Cfr13I GGNCC 1 cut(s) 210
CseI GACGC 2 cut(s) 838, 991
CsiI ACCWGGT 1 cut(s) 724
Csp6I GTAC 5 cut(s) 53, 234, 593, 1041, 1126
CspAI ACCGGT 1 cut(s) 1122
CviAII CATG 5 cut(s) 47, 586, 719, 820, 1149
CviQI GTAC 5 cut(s) 53, 234, 593, 1041, 1126
DdeI CTNAG 5 cut(s) 56, 180, 250, 604, 800
DpnI GATC 8 cut(s) 27, 92, 269, 396, 506, 1052, 1079, 1167
DpnII GATC 8 cut(s) 25, 90, 267, 394, 504, 1050, 1077, 1165
DraI TTTAAA 1 cut(s) 1087
Eam1104I CTCTTC 1 cut(s) 1095
EarI CTCTTC 1 cut(s) 1095
Eco24I GRGCYC 1 cut(s) 323
Eco47I GGWCC 1 cut(s) 210
Eco57I CTGAAG 2 cut(s) 690, 1053
EcoO109I RGGNCCY 1 cut(s) 210
EcoRII CCWGG 3 cut(s) 206, 662, 724
EcoT38I GRGCYC 1 cut(s) 323
FaeI CATG 5 cut(s) 50, 589, 722, 823, 1152
FaqI GGGAC 2 cut(s) 196, 694
FatI CATG 5 cut(s) 46, 585, 718, 819, 1148
FbaI TGATCA 2 cut(s) 1050, 1077
Fnu4HI GCNGC 5 cut(s) 74, 174, 929, 1142, 1145
FokI GGATG 5 cut(s) 342, 873, 896, 992, 1169
FriOI GRGCYC 1 cut(s) 323
Fsp4HI GCNGC 5 cut(s) 74, 174, 929, 1142, 1145
FspBI CTAG 2 cut(s) 170, 1223
GluI GCNGC 5 cut(s) 74, 174, 929, 1142, 1145
GsuI CTGGAG 2 cut(s) 190, 828
HaeIII GGCC 2 cut(s) 379, 539
HapII CCGG 3 cut(s) 70, 977, 1123
HgaI GACGC 2 cut(s) 838, 991
Hin1II CATG 5 cut(s) 50, 589, 722, 823, 1152
HinfI GANTC 3 cut(s) 435, 935, 1015
HpaII CCGG 3 cut(s) 70, 977, 1123
HphI GGTGA 4 cut(s) 271, 574, 642, 1087
Hpy166II GTNNAC 1 cut(s) 236
Hpy188I TCNGA 5 cut(s) 139, 229, 544, 611, 670
Hpy188III TCNNGA 6 cut(s) 23, 392, 779, 881, 1012, 1133
Hpy8I GTNNAC 1 cut(s) 236
HpyAV CCTTC 2 cut(s) 224, 1071
HpyCH4III ACNGT 6 cut(s) 117, 620, 899, 1040, 1045, 1130
HpyCH4IV ACGT 2 cut(s) 595, 967
HpyCH4V TGCA 2 cut(s) 327, 1116
HpyF10VI GCNNNNNNNGC 1 cut(s) 66
HpyF3I CTNAG 5 cut(s) 56, 180, 250, 604, 800
HpySE526I ACGT 2 cut(s) 595, 967
Hsp92II CATG 5 cut(s) 50, 589, 722, 823, 1152
KpnI GGTACC 1 cut(s) 1129
KroI GCCGGC 1 cut(s) 69
KroNI GCCGGC 1 cut(s) 71
Ksp22I TGATCA 2 cut(s) 1050, 1077
Kzo9I GATC 8 cut(s) 25, 90, 267, 394, 504, 1050, 1077, 1165
LmnI GCTCC 6 cut(s) 189, 474, 643, 695, 736, 1138
Lsp1109I GCAGC 5 cut(s) 60, 185, 915, 1128, 1131
LweI GCATC 3 cut(s) 28, 185, 874
MabI ACCWGGT 1 cut(s) 724
MaeI CTAG 2 cut(s) 170, 1223
MaeII ACGT 2 cut(s) 595, 967
MaeIII GTNAC 2 cut(s) 648, 1172
MalI GATC 8 cut(s) 27, 92, 269, 396, 506, 1052, 1079, 1167
MboI GATC 8 cut(s) 25, 90, 267, 394, 504, 1050, 1077, 1165
MboII GAAGA 7 cut(s) 19, 266, 380, 430, 683, 1046, 1112
MflI RGATCY 1 cut(s) 504
MhlI GDGCHC 1 cut(s) 323
MmeI TCCRAC 3 cut(s) 55, 162, 602
MnlI CCTC 7 cut(s) 209, 550, 763, 770, 851, 1066, 1129
MroNI GCCGGC 1 cut(s) 69
MseI TTAA 5 cut(s) 633, 945, 960, 987, 1086
MslI CAYNNNNRTG 2 cut(s) 360, 824
MspA1I CMGCKG 1 cut(s) 295
MspI CCGG 3 cut(s) 70, 977, 1123
MspR9I CCNGG 3 cut(s) 208, 664, 726
Mva1269I GAATGC 1 cut(s) 60
MvaI CCWGG 3 cut(s) 208, 664, 726
MvnI CGCG 1 cut(s) 393
MwoI GCNNNNNNNGC 1 cut(s) 66
NaeI GCCGGC 1 cut(s) 71
NdeII GATC 8 cut(s) 25, 90, 267, 394, 504, 1050, 1077, 1165
NgoMIV GCCGGC 1 cut(s) 69
NlaIII CATG 5 cut(s) 50, 589, 722, 823, 1152
NlaIV GGNNCC 4 cut(s) 212, 422, 738, 1127
NmuCI GTSAC 1 cut(s) 648
NruI TCGCGA 1 cut(s) 393
NspI RCATGY 1 cut(s) 50
PaqCI CACCTGC 1 cut(s) 290
PciI ACATGT 1 cut(s) 46
PctI GAATGC 1 cut(s) 60
PdiI GCCGGC 1 cut(s) 71
PfeI GAWTC 3 cut(s) 435, 935, 1015
PflMI CCANNNNNTGG 2 cut(s) 431, 621
PinAI ACCGGT 1 cut(s) 1122
PkrI GCNGC 5 cut(s) 75, 175, 930, 1143, 1146
Ple19I CGATCG 1 cut(s) 397
Ppu21I YACGTR 2 cut(s) 596, 968
PpuMI RGGWCCY 1 cut(s) 210
PscI ACATGT 1 cut(s) 46
PsiI TTATAA 2 cut(s) 131, 402
Psp5II RGGWCCY 1 cut(s) 210
Psp6I CCWGG 3 cut(s) 206, 662, 724
PspGI CCWGG 3 cut(s) 206, 662, 724
PspN4I GGNNCC 4 cut(s) 212, 422, 738, 1127
PspPI GGNCC 1 cut(s) 210
PspPPI RGGWCCY 1 cut(s) 210
PsrI GAACNNNNNNTAC 2 cut(s) 36, 68
PsuI RGATCY 1 cut(s) 504
PvuI CGATCG 1 cut(s) 397
RruI TCGCGA 1 cut(s) 393
RsaI GTAC 5 cut(s) 54, 235, 594, 1042, 1127
RsaNI GTAC 5 cut(s) 53, 234, 593, 1041, 1126
RseI CAYNNNNRTG 2 cut(s) 360, 824
SaqAI TTAA 5 cut(s) 633, 945, 960, 987, 1086
SatI GCNGC 5 cut(s) 74, 174, 929, 1142, 1145
Sau3AI GATC 8 cut(s) 25, 90, 267, 394, 504, 1050, 1077, 1165
Sau96I GGNCC 1 cut(s) 210
ScrFI CCNGG 3 cut(s) 208, 664, 726
SduI GDGCHC 1 cut(s) 323
SexAI ACCWGGT 1 cut(s) 724
SfaNI GCATC 3 cut(s) 28, 185, 874
SinI GGWCC 1 cut(s) 210
SmiMI CAYNNNNRTG 2 cut(s) 360, 824
SmlI CTYRAG 1 cut(s) 1133
SmoI CTYRAG 1 cut(s) 1133
SsiI CCGC 5 cut(s) 94, 295, 418, 442, 658
SspMI CTAG 2 cut(s) 170, 1223
StyD4I CCNGG 3 cut(s) 206, 662, 724
TaaI ACNGT 6 cut(s) 117, 620, 899, 1040, 1045, 1130
TaiI ACGT 2 cut(s) 598, 970
TaqI TCGA 2 cut(s) 266, 1229
TatI WGTACW 1 cut(s) 52
TfiI GAWTC 3 cut(s) 435, 935, 1015
Tru1I TTAA 5 cut(s) 633, 945, 960, 987, 1086
Tru9I TTAA 5 cut(s) 633, 945, 960, 987, 1086
TscAI CASTG 2 cut(s) 84, 904
TseFI GTSAC 1 cut(s) 648
TseI GCWGC 5 cut(s) 73, 173, 928, 1141, 1144
Tsp45I GTSAC 1 cut(s) 648
TspDTI ATGAA 9 cut(s) 574, 692, 735, 825, 836, 929, 981, 1015, 1230
TspGWI ACGGA 1 cut(s) 176
TspRI CASTG 2 cut(s) 84, 904
Van91I CCANNNNNTGG 2 cut(s) 431, 621
VpaK11BI GGWCC 1 cut(s) 210
XapI RAATTY 2 cut(s) 460, 902
XceI RCATGY 1 cut(s) 50
XcmI CCANNNNNNNNNTGG 3 cut(s) 515, 660, 812
XspI CTAG 2 cut(s) 170, 1223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.