Rroxscaffold_1G00005730

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000139
Physical Location & Seq
Forward (+)
7775888 .. 7777929
2042 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00005730.1

Sequence Viewer

Length: 1407 bp
ATGTCGTCGACGAAGAAGATGTACCCTGTCTTCATCGATCTCTCTGAGGAAGATGATGGTGATGGATTGGATGATCTGACTGGTGTTGACAACGAGCTTGCAGCCGGCCACCACATCCAGCTCTTTGCCGAAATCATGTCAATGTCGAAGATGAAAAATGAGAGCTTTGATCTACATGAAGATGTTATAGTGAAGATTCTTTGTCGGTTGCCGGTCAAGTCCTTGATCCGGTTCACTTGTGTGTCGAAACGGTGGCGTTCTATTATCATTTCTGATCCTCAATTTGGCAATTCTCACCTTCAACTAGCATCACAGCAGGGCAGCCTCTGTCAAAAAGTCCTCATCTGCATCTACCCTACAGATAAAACCGTAGAAGGTCGAATTCCGAATCGTTTTGAAGATAACATGCCTTGGTTGCCCTCTCGATTTCAATCCTTGGAAGGTTATTCTTCAGTCAATAATCTCACCTTCCCATCAGAGGAGAAGAGCGAACGAGTAATGGCCTCGTGCAATGGTTTGGTACTTCTGGGTGAATCCTATAAAAGTTATTTTAAGAACTTGTCTATCTGGAATCCATCAACTGGATTTTTCCGCAAAATACCTGCTCCAAGTTTTGGGGTTGAGATGACAAAATCAACAGAGGAGAAAAAGAACTGTAGCTTTTTATATCATGGTTTTGGTCAAGTGTCAGCCAGTGACGACTACAAGCTTGTTTTCATAAAACCTGCTCTCGGTGATTTTGTTGAAGTTCATGTGTTCTCACTCAGAGACAACGTTTGGAAAGTTATTAAATCTCCCTCTTCATTGACCGGCTGGATTGACGGACAGGGGGCTCTTTCAAATGGAGCGATTCATTGGGTCAACTATCCAACAGGTGGGAAAATAGAACCAACTATGGTTGCTTTTGCTTTAGCAGAGGAGGAGTTCCGGCAAGTGCCATTACCTGTTTTCGACCAAAATGAAGATGACACGCATGTGACTTGTGTAAGAACTCAGGTTCTTTTAGGAGGGTGCCTTGGTGTATGGTCAGCGGATCCTTATGGGTATAGAACATTTTGGGTGATGAGAGAGTATGGTGTGCCTGAATCTTGGGCTAAACTCATTCAATTGGGTCGAGATGATTTACCAGATGAGTTCACTTCATGCACTAGCTGGGAACCTAGTTTCGTTACAGAAGGCGGTACAGTTATGATCAAACTGCTTGGCAAAGAACGTAGATTTATTACAGAAGACGGTACAGTATATATGATCAAACTGCCTGGCAAGAATGAGTTGGTCTGGATTGATTGCCATCAAGAAGAGAATACTGCAGTGTGCAGCACCCATTATAGACTTGAGGAGGTGCCTGAGTGTACGATACTTGACATAACTGAATATGATGAAACTTTAGTTTCAGTACCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

468

Amino Acids

52.92

Weight (kDa)

4.94

Isoelectric Point (pI)

50.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 57 - 92 2.3e-09 F-box domain
FBA_3 PF08268 143 - 366 4e-14 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 610, 733
AccB1I GGYRCC 2 cut(s) 1011, 1342
AccB7I CCANNNNNTGG 3 cut(s) 581, 614, 875
AccI GTMKAC 1 cut(s) 8
AciI CCGC 3 cut(s) 592, 1031, 1179
AclI AACGTT 1 cut(s) 774
AclWI GGATC 4 cut(s) 220, 269, 1028, 1041
AcoI YGGCCR 1 cut(s) 106
AcsI RAATTY 1 cut(s) 381
AcuI CTGAAG 1 cut(s) 435
AfaI GTAC 6 cut(s) 23, 522, 1183, 1237, 1354, 1398
AfiI CCNNNNNNNGG 7 cut(s) 228, 284, 478, 581, 614, 731, 875
AgsI TTSAA 6 cut(s) 302, 398, 431, 746, 840, 1106
AjnI CCWGG 1 cut(s) 1258
AleI CACNNNNGTG 2 cut(s) 239, 974
AluBI AGCT 6 cut(s) 97, 121, 165, 660, 709, 1152
AluI AGCT 6 cut(s) 97, 121, 165, 660, 709, 1152
Alw26I GTCTC 1 cut(s) 762
AlwI GGATC 4 cut(s) 220, 269, 1028, 1041
AlwNI CAGNNNCTG 2 cut(s) 327, 1400
AoxI GGCC 2 cut(s) 106, 501
ApeKI GCWGC 3 cut(s) 101, 321, 1317
ApoI RAATTY 1 cut(s) 381
AsuHPI GGTGA 6 cut(s) 71, 287, 457, 542, 746, 1072
BamHI GGATCC 1 cut(s) 1033
BanI GGYRCC 2 cut(s) 1011, 1342
BanII GRGCYC 1 cut(s) 835
BarI GAAGNNNNNNTAC 3 cut(s) 14, 37, 46
BauI CACGAG 1 cut(s) 505
BbsI GAAGAC 2 cut(s) 22, 1236
BbvI GCAGC 3 cut(s) 113, 333, 1329
BccI CCATC 5 cut(s) 50, 56, 481, 583, 1299
BciT130I CCWGG 1 cut(s) 1260
BclI TGATCA 2 cut(s) 1191, 1248
BcoDI GTCTC 1 cut(s) 762
BfaI CTAG 3 cut(s) 305, 1149, 1161
BfmI CTRYAG 3 cut(s) 357, 655, 1308
BfuAI ACCTGC 2 cut(s) 610, 733
BisI GCNGC 3 cut(s) 102, 322, 1318
BlsI GCNGC 3 cut(s) 103, 323, 1319
Bme1390I CCNGG 1 cut(s) 1260
BmiI GGNNCC 4 cut(s) 1013, 1035, 1158, 1344
BmrFI CCNGG 1 cut(s) 1260
BmsI GCATC 2 cut(s) 317, 357
BpiI GAAGAC 2 cut(s) 22, 1236
BpuEI CTTGAG 1 cut(s) 1355
Bsa29I ATCGAT 1 cut(s) 36
BsaBI GATNNNNATC 2 cut(s) 430, 1290
BsaJI CCNNGG 3 cut(s) 410, 435, 1015
BsaWI WCCGGW 1 cut(s) 228
Bsc4I CCNNNNNNNGG 7 cut(s) 228, 284, 478, 581, 614, 731, 875
Bse118I RCCGGY 3 cut(s) 104, 211, 809
Bse1I ACTGG 3 cut(s) 85, 586, 693
Bse3DI GCAATG 1 cut(s) 517
Bse8I GATNNNNATC 2 cut(s) 430, 1290
BseBI CCWGG 1 cut(s) 1260
BseCI ATCGAT 1 cut(s) 36
BseDI CCNNGG 3 cut(s) 410, 435, 1015
BseGI GGATG 2 cut(s) 76, 114
BseJI GATNNNNATC 2 cut(s) 430, 1290
BseLI CCNNNNNNNGG 7 cut(s) 228, 284, 478, 581, 614, 731, 875
BseMI GCAATG 1 cut(s) 517
BseMII CTCAG 4 cut(s) 36, 778, 1007, 1338
BseNI ACTGG 3 cut(s) 85, 586, 693
BseRI GAGGAG 5 cut(s) 494, 656, 932, 935, 1352
BseXI GCAGC 3 cut(s) 113, 333, 1329
BseYI CCCAGC 1 cut(s) 1152
BsgI GTGCAG 1 cut(s) 1336
BshFI GGCC 2 cut(s) 108, 503
BshNI GGYRCC 2 cut(s) 1011, 1342
BshVI ATCGAT 1 cut(s) 36
BsiSI CCGG 5 cut(s) 105, 212, 229, 810, 928
BslI CCNNNNNNNGG 7 cut(s) 228, 284, 478, 581, 614, 731, 875
BsmAI GTCTC 1 cut(s) 762
BsnI GGCC 2 cut(s) 108, 503
Bsp1286I GDGCHC 1 cut(s) 835
Bsp143I GATC 8 cut(s) 37, 73, 169, 225, 274, 1033, 1191, 1248
BspACI CCGC 3 cut(s) 592, 1031, 1179
BspANI GGCC 2 cut(s) 108, 503
BspCNI CTCAG 4 cut(s) 37, 777, 1006, 1339
BspDI ATCGAT 1 cut(s) 36
BspLI GGNNCC 4 cut(s) 1013, 1035, 1158, 1344
BspMAI CTGCAG 1 cut(s) 1312
BspMI ACCTGC 2 cut(s) 610, 733
BspPI GGATC 4 cut(s) 220, 269, 1028, 1041
BspQI GCTCTTC 1 cut(s) 479
BspT107I GGYRCC 2 cut(s) 1011, 1342
BsrDI GCAATG 1 cut(s) 517
BsrFI RCCGGY 3 cut(s) 104, 211, 809
BsrI ACTGG 3 cut(s) 85, 586, 693
BssAI RCCGGY 3 cut(s) 104, 211, 809
BssECI CCNNGG 3 cut(s) 410, 435, 1015
BssMI GATC 8 cut(s) 37, 73, 169, 225, 274, 1033, 1191, 1248
BssSI CACGAG 1 cut(s) 505
BssT1I CCWWGG 3 cut(s) 410, 435, 1015
Bst2BI CACGAG 1 cut(s) 505
Bst2UI CCWGG 1 cut(s) 1260
Bst4CI ACNGT 6 cut(s) 252, 370, 656, 1186, 1235, 1240
Bst6I CTCTTC 3 cut(s) 479, 805, 1293
BstC8I GCNNGC 2 cut(s) 99, 106
BstDEI CTNAG 4 cut(s) 45, 764, 993, 1347
BstF5I GGATG 2 cut(s) 76, 114
BstKTI GATC 8 cut(s) 40, 76, 172, 228, 277, 1036, 1194, 1251
BstMAI GTCTC 1 cut(s) 762
BstMBI GATC 8 cut(s) 37, 73, 169, 225, 274, 1033, 1191, 1248
BstMWI GCNNNNNNNGC 1 cut(s) 415
BstNI CCWGG 1 cut(s) 1260
BstNSI RCATGY 2 cut(s) 409, 977
BstSCI CCNGG 1 cut(s) 1258
BstSFI CTRYAG 3 cut(s) 357, 655, 1308
BstV1I GCAGC 3 cut(s) 113, 333, 1329
BstV2I GAAGAC 2 cut(s) 22, 1236
BstX2I RGATCY 1 cut(s) 1033
BstYI RGATCY 1 cut(s) 1033
Bsu15I ATCGAT 1 cut(s) 36
BsuRI GGCC 2 cut(s) 108, 503
BsuTUI ATCGAT 1 cut(s) 36
BtsCI GGATG 2 cut(s) 76, 114
BtsI GCAGTG 1 cut(s) 1317
BtsIMutI CAGTG 2 cut(s) 700, 1317
BveI ACCTGC 2 cut(s) 610, 733
Cac8I GCNNGC 2 cut(s) 99, 106
CaiI CAGNNNCTG 2 cut(s) 327, 1400
Cfr10I RCCGGY 3 cut(s) 104, 211, 809
ClaI ATCGAT 1 cut(s) 36
Csp6I GTAC 6 cut(s) 22, 521, 1182, 1236, 1353, 1397
CviAII CATG 7 cut(s) 136, 176, 406, 671, 752, 974, 1143
CviQI GTAC 6 cut(s) 22, 521, 1182, 1236, 1353, 1397
DdeI CTNAG 4 cut(s) 45, 764, 993, 1347
DpnI GATC 8 cut(s) 39, 75, 171, 227, 276, 1035, 1193, 1250
DpnII GATC 8 cut(s) 37, 73, 169, 225, 274, 1033, 1191, 1248
EaeI YGGCCR 1 cut(s) 106
Eam1104I CTCTTC 3 cut(s) 479, 805, 1293
EarI CTCTTC 3 cut(s) 479, 805, 1293
Eco130I CCWWGG 3 cut(s) 410, 435, 1015
Eco24I GRGCYC 1 cut(s) 835
Eco57I CTGAAG 1 cut(s) 435
EcoRI GAATTC 1 cut(s) 381
EcoRII CCWGG 1 cut(s) 1258
EcoT14I CCWWGG 3 cut(s) 410, 435, 1015
EcoT38I GRGCYC 1 cut(s) 835
ErhI CCWWGG 3 cut(s) 410, 435, 1015
FaeI CATG 7 cut(s) 139, 179, 409, 674, 755, 977, 1146
FatI CATG 7 cut(s) 135, 175, 405, 670, 751, 973, 1142
FbaI TGATCA 2 cut(s) 1191, 1248
FblI GTMKAC 1 cut(s) 8
Fnu4HI GCNGC 3 cut(s) 102, 322, 1318
FokI GGATG 2 cut(s) 83, 101
FriOI GRGCYC 1 cut(s) 835
Fsp4HI GCNGC 3 cut(s) 102, 322, 1318
FspBI CTAG 3 cut(s) 305, 1149, 1161
GluI GCNGC 3 cut(s) 102, 322, 1318
GsaI CCCAGC 1 cut(s) 1156
HaeIII GGCC 2 cut(s) 108, 503
HapII CCGG 5 cut(s) 105, 212, 229, 810, 928
Hin1II CATG 7 cut(s) 139, 179, 409, 674, 755, 977, 1146
HincII GTYRAC 3 cut(s) 9, 88, 862
HindII GTYRAC 3 cut(s) 9, 88, 862
HindIII AAGCTT 1 cut(s) 707
HinfI GANTC 6 cut(s) 196, 388, 533, 571, 850, 1085
HpaII CCGG 5 cut(s) 105, 212, 229, 810, 928
HphI GGTGA 6 cut(s) 71, 287, 457, 542, 746, 1072
Hpy166II GTNNAC 6 cut(s) 9, 88, 234, 862, 1137, 1353
Hpy188I TCNGA 6 cut(s) 46, 78, 274, 387, 478, 767
Hpy188III TCNNGA 5 cut(s) 423, 568, 1115, 1279, 1295
Hpy8I GTNNAC 6 cut(s) 9, 88, 234, 862, 1137, 1353
Hpy99I CGWCG 2 cut(s) 10, 13
HpyAV CCTTC 5 cut(s) 308, 368, 434, 478, 1169
HpyCH4III ACNGT 6 cut(s) 252, 370, 656, 1186, 1235, 1240
HpyCH4IV ACGT 2 cut(s) 774, 1213
HpyCH4V TGCA 6 cut(s) 101, 348, 510, 1146, 1310, 1317
HpyF10VI GCNNNNNNNGC 1 cut(s) 415
HpyF3I CTNAG 4 cut(s) 45, 764, 993, 1347
HpySE526I ACGT 2 cut(s) 774, 1213
Hsp92II CATG 7 cut(s) 139, 179, 409, 674, 755, 977, 1146
KroI GCCGGC 1 cut(s) 104
KroNI GCCGGC 1 cut(s) 106
Ksp22I TGATCA 2 cut(s) 1191, 1248
Kzo9I GATC 8 cut(s) 37, 73, 169, 225, 274, 1033, 1191, 1248
LguI GCTCTTC 1 cut(s) 479
LmnI GCTCC 2 cut(s) 610, 845
Lsp1109I GCAGC 3 cut(s) 113, 333, 1329
LweI GCATC 2 cut(s) 317, 357
MaeI CTAG 3 cut(s) 305, 1149, 1161
MaeII ACGT 2 cut(s) 774, 1213
MaeIII GTNAC 3 cut(s) 695, 976, 1168
MalI GATC 8 cut(s) 39, 75, 171, 227, 276, 1035, 1193, 1250
MboI GATC 8 cut(s) 37, 73, 169, 225, 274, 1033, 1191, 1248
MfeI CAATTG 1 cut(s) 1106
MflI RGATCY 1 cut(s) 1033
MhlI GDGCHC 1 cut(s) 835
MluCI AATT 4 cut(s) 281, 289, 381, 1106
MmeI TCCRAC 1 cut(s) 893
MroNI GCCGGC 1 cut(s) 104
MseI TTAA 2 cut(s) 552, 789
MslI CAYNNNNRTG 4 cut(s) 140, 180, 239, 974
MspA1I CMGCKG 1 cut(s) 1031
MspI CCGG 5 cut(s) 105, 212, 229, 810, 928
MspR9I CCNGG 1 cut(s) 1260
MunI CAATTG 1 cut(s) 1106
MvaI CCWGG 1 cut(s) 1260
MwoI GCNNNNNNNGC 1 cut(s) 415
NaeI GCCGGC 1 cut(s) 106
NdeII GATC 8 cut(s) 37, 73, 169, 225, 274, 1033, 1191, 1248
NgoMIV GCCGGC 1 cut(s) 104
NlaIII CATG 7 cut(s) 139, 179, 409, 674, 755, 977, 1146
NlaIV GGNNCC 4 cut(s) 1013, 1035, 1158, 1344
NmuCI GTSAC 2 cut(s) 695, 976
NspI RCATGY 2 cut(s) 409, 977
OliI CACNNNNGTG 2 cut(s) 239, 974
PciSI GCTCTTC 1 cut(s) 479
PdiI GCCGGC 1 cut(s) 106
PfeI GAWTC 6 cut(s) 196, 388, 533, 571, 850, 1085
PflMI CCANNNNNTGG 3 cut(s) 581, 614, 875
PkrI GCNGC 3 cut(s) 103, 323, 1319
Psp1406I AACGTT 1 cut(s) 774
Psp6I CCWGG 1 cut(s) 1258
PspFI CCCAGC 1 cut(s) 1152
PspGI CCWGG 1 cut(s) 1258
PspN4I GGNNCC 4 cut(s) 1013, 1035, 1158, 1344
PstI CTGCAG 1 cut(s) 1312
PstNI CAGNNNCTG 2 cut(s) 327, 1400
PsuI RGATCY 1 cut(s) 1033
RsaI GTAC 6 cut(s) 23, 522, 1183, 1237, 1354, 1398
RsaNI GTAC 6 cut(s) 22, 521, 1182, 1236, 1353, 1397
RseI CAYNNNNRTG 4 cut(s) 140, 180, 239, 974
SalI GTCGAC 1 cut(s) 7
SapI GCTCTTC 1 cut(s) 479
SaqAI TTAA 2 cut(s) 552, 789
SatI GCNGC 3 cut(s) 102, 322, 1318
Sau3AI GATC 8 cut(s) 37, 73, 169, 225, 274, 1033, 1191, 1248
ScrFI CCNGG 1 cut(s) 1260
SduI GDGCHC 1 cut(s) 835
SfaNI GCATC 2 cut(s) 317, 357
SfcI CTRYAG 3 cut(s) 357, 655, 1308
SgrDI CGTCGACG 1 cut(s) 7
SmiMI CAYNNNNRTG 4 cut(s) 140, 180, 239, 974
SmlI CTYRAG 1 cut(s) 1334
SmoI CTYRAG 1 cut(s) 1334
Sse9I AATT 4 cut(s) 281, 289, 381, 1106
SsiI CCGC 3 cut(s) 592, 1031, 1179
SspMI CTAG 3 cut(s) 305, 1149, 1161
StyD4I CCNGG 1 cut(s) 1258
StyI CCWWGG 3 cut(s) 410, 435, 1015
TaaI ACNGT 6 cut(s) 252, 370, 656, 1186, 1235, 1240
TaiI ACGT 2 cut(s) 777, 1216
TaqI TCGA 8 cut(s) 8, 36, 146, 245, 379, 424, 951, 1114
TasI AATT 4 cut(s) 281, 289, 381, 1106
TfiI GAWTC 6 cut(s) 196, 388, 533, 571, 850, 1085
Tru1I TTAA 2 cut(s) 552, 789
Tru9I TTAA 2 cut(s) 552, 789
TscAI CASTG 2 cut(s) 700, 1317
TseFI GTSAC 2 cut(s) 695, 976
TseI GCWGC 3 cut(s) 101, 321, 1317
Tsp45I GTSAC 2 cut(s) 695, 976
TspGWI ACGGA 1 cut(s) 837
TspRI CASTG 2 cut(s) 700, 1317
Van91I CCANNNNNTGG 3 cut(s) 581, 614, 875
XapI RAATTY 1 cut(s) 381
XceI RCATGY 2 cut(s) 409, 977
XmiI GTMKAC 1 cut(s) 8
XspI CTAG 3 cut(s) 305, 1149, 1161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.