Rh1DG432800

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000139
Physical Location & Seq
Forward (+)
64537415 .. 64539343
1929 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG432800.1

Sequence Viewer

Length: 1434 bp
ATGAATCTTCATTTCAACCCGTCCCTCTTCAGTCTCTTCACAAACCTTGAAGGTCTTTCACTCTTTCCCATCTCTATCGGTCCATCTCCATCTGGTTTAGTTGGGTTGAGAAGATTGAAGGTGTTGGCAATGTTGAAGAACAAGGAGGAGCAGGAGCTCCAACATGTCCCTGAACATGTTGTACTCAACATTCTCTGCCGCTTGCCGGTCAAGTCCTTGATCCGCTTCACTTGTGTCTCAAAACGCTGGCGCTCTCTTATCATTTCCGACCACCAATTTGGCAACTCCCATTTCCAACTAGCAGCATCCCACCTCCGTCATAGTGTCTTGATTTCAGCAGGTACAACACCCCCTGAGATGTTACGCTCTCGATTTCTATTCCTATCAGAAGATAACTTATTGAACAGAAATCTCAACTGGCCAAGGCCATCCGAGTCGTATAGCGACATTCTAGTAACGGGCTCTTGCAATGGTTTGGTAGTTTTAGGCCACTGCAATTCCCATCGCAATGGACTAAATTCTTTACCTCTAGGCCAACGGTATTGTCGTTATTTTGAACGTTTGGTGATCTGGAACCCATCAACTGGATTCTTCCGCGAGATACCTTGTCCAAATTTTCAGATGGGGATGGTAAAATTTAGAGAAGCAAAGCAAGAGAGGGAAATGAGCGGTGTATATTATGGTTTTGGTCAAGTCTCGGCCTCCGACGACGACTACAAACTTGTGGTGATGCAAAGTTTGGGTGATTTTATGGTAGTACATGTGTTCTCAGTCAGAGCCAACTGTTGGAAAATTGTTAAAGCTTCTTACTTGTCGCCATACCGCCTCTGGTCTGAAGAATTGGGGACTTATTCAAATGGAGCAATTCATTGGGTCAGTAACCGTGAACCTGGGATTTTCGAGCCACCTGTGTATGCTTTTAATCTGGCAAATGAGGAGTTTCGGGAAATGCCATTGCCTGTTCCTAGCCGTAATGAAGATGGCATGGAAATGACGCAAATTAGAACTCAAGTTCTTTTAGGAGGATGTCTTTGTGTGATGTTTCAGGATGTGACGTTTCAGGACACTAAAAAGTATACTGAATTTTGGGTGATGAAAGAGTATGGGCTGCCTGAGTCTTGGGTTAAACTCTTTGGGTTTAATGTACATGATTTACCAGATGTGTTTGATTCATTATATAAATGCCATTTTTGGGATCCTATTTTCATTGCAGAAGACGGTACAGTTGTGATCAAACTGCGTTCCTGGTCGGAGCTCATCTGGGTTAAATGCCGCAAAGAAGAGAAGCCAGTCTGCACCATCCGGTACCGTCTTGAGGAGGTGCTGGGATATAAGTATGGATTTGATGCCATTTTGTATGATGAAACTCTAGTTTCGATACCTGAGGATTATGGTGATTCATGTGGCTTGAGACTCAGAGGCCTGAAAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

477

Amino Acids

55.03

Weight (kDa)

6.89

Isoelectric Point (pI)

44.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 54 - 90 1.1e-09 F-box domain
F-box-like PF12937 54 - 90 7.2e-07 F-box-like
FBA_3 PF08268 181 - 376 2.1e-08 F-box associated beta propeller domain
FBA_1 PF07734 185 - 414 9.3e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 329
Acc65I GGTACC 1 cut(s) 1305
AccB1I GGYRCC 1 cut(s) 1305
AccB7I CCANNNNNTGG 2 cut(s) 584, 786
AccBSI CCGCTC 1 cut(s) 669
AccI GTMKAC 1 cut(s) 1076
AccII CGCG 1 cut(s) 597
AciI CCGC 6 cut(s) 199, 223, 595, 669, 823, 1273
AclI AACGTT 1 cut(s) 559
AclWI GGATC 3 cut(s) 214, 1190, 1203
AcoI YGGCCR 1 cut(s) 419
AcsI RAATTY 4 cut(s) 517, 613, 635, 1082
AcuI CTGAAG 2 cut(s) 13, 855
AfaI GTAC 6 cut(s) 183, 343, 759, 1146, 1222, 1307
AfiI CCNNNNNNNGG 5 cut(s) 205, 584, 786, 1192, 1315
AflIII ACRYGT 3 cut(s) 163, 175, 760
AgsI TTSAA 7 cut(s) 16, 50, 118, 136, 403, 557, 855
AjnI CCWGG 2 cut(s) 889, 1244
AluBI AGCT 3 cut(s) 157, 803, 1255
AluI AGCT 3 cut(s) 157, 803, 1255
Alw21I GWGCWC 2 cut(s) 159, 1257
Alw26I GTCTC 4 cut(s) 38, 241, 700, 1405
AlwI GGATC 3 cut(s) 214, 1190, 1203
AoxI GGCC 6 cut(s) 419, 425, 487, 532, 699, 1420
ApeKI GCWGC 2 cut(s) 302, 1108
ApoI RAATTY 4 cut(s) 517, 613, 635, 1082
ArsI GACNNNNNNTTYG 2 cut(s) 260, 292
Asp718I GGTACC 1 cut(s) 1305
AspLEI GCGC 1 cut(s) 252
AspS9I GGNCC 1 cut(s) 80
AsuHPI GGTGA 5 cut(s) 577, 739, 755, 1102, 1406
AvaII GGWCC 1 cut(s) 80
AxyI CCTNAGG 1 cut(s) 1383
BaeI ACNNNNGTAYC 2 cut(s) 1212, 1245
BalI TGGCCA 1 cut(s) 421
BamHI GGATCC 1 cut(s) 1195
BanI GGYRCC 1 cut(s) 1305
BanII GRGCYC 3 cut(s) 159, 464, 1257
BbsI GAAGAC 1 cut(s) 1221
Bbv12I GWGCWC 2 cut(s) 159, 1257
BbvI GCAGC 2 cut(s) 314, 1095
BceAI ACGGC 1 cut(s) 954
BciT130I CCWGG 2 cut(s) 891, 1246
BclI TGATCA 1 cut(s) 1230
BcoDI GTCTC 4 cut(s) 38, 241, 700, 1405
BfaI CTAG 5 cut(s) 299, 452, 530, 966, 1370
BfoI RGCGCY 1 cut(s) 253
BfuAI ACCTGC 1 cut(s) 329
BisI GCNGC 4 cut(s) 199, 303, 1109, 1273
BlsI GCNGC 4 cut(s) 200, 304, 1110, 1274
Bme1390I CCNGG 2 cut(s) 891, 1246
Bme18I GGWCC 1 cut(s) 80
BmgT120I GGNCC 1 cut(s) 80
BmiI GGNNCC 3 cut(s) 575, 1197, 1307
BmrFI CCNGG 2 cut(s) 891, 1246
BmsI GCATC 3 cut(s) 314, 720, 1336
BpiI GAAGAC 1 cut(s) 1221
BpuEI CTTGAG 3 cut(s) 993, 1334, 1429
BsaJI CCNNGG 2 cut(s) 422, 890
BsaWI WCCGGW 1 cut(s) 1302
Bsc4I CCNNNNNNNGG 5 cut(s) 205, 584, 786, 1192, 1315
Bse118I RCCGGY 1 cut(s) 205
Bse1I ACTGG 3 cut(s) 422, 589, 1289
Bse21I CCTNAGG 1 cut(s) 1383
Bse3DI GCAATG 5 cut(s) 135, 475, 514, 953, 1206
BseBI CCWGG 2 cut(s) 891, 1246
BseDI CCNNGG 2 cut(s) 422, 890
BseGI GGATG 6 cut(s) 305, 428, 633, 1031, 1054, 1299
BseLI CCNNNNNNNGG 5 cut(s) 205, 584, 786, 1192, 1315
BseMI GCAATG 5 cut(s) 135, 475, 514, 953, 1206
BseMII CTCAG 5 cut(s) 345, 783, 1104, 1374, 1429
BseNI ACTGG 3 cut(s) 422, 589, 1289
BseRI GAGGAG 3 cut(s) 161, 950, 1331
BseXI GCAGC 2 cut(s) 314, 1095
BseYI CCCAGC 1 cut(s) 1324
BsgI GTGCAG 1 cut(s) 1279
Bsh1236I CGCG 1 cut(s) 597
BshFI GGCC 6 cut(s) 421, 427, 489, 534, 701, 1422
BshNI GGYRCC 1 cut(s) 1305
BsiHKAI GWGCWC 2 cut(s) 159, 1257
BsiSI CCGG 2 cut(s) 206, 1303
BslFI GGGAC 3 cut(s) 7, 152, 859
BslI CCNNNNNNNGG 5 cut(s) 205, 584, 786, 1192, 1315
BsmAI GTCTC 4 cut(s) 38, 241, 700, 1405
BsmFI GGGAC 3 cut(s) 7, 152, 859
BsnI GGCC 6 cut(s) 421, 427, 489, 534, 701, 1422
Bsp1286I GDGCHC 3 cut(s) 159, 464, 1257
Bsp1407I TGTACA 1 cut(s) 1144
Bsp143I GATC 4 cut(s) 219, 567, 1195, 1230
BspACI CCGC 6 cut(s) 199, 223, 595, 669, 823, 1273
BspANI GGCC 6 cut(s) 421, 427, 489, 534, 701, 1422
BspCNI CTCAG 5 cut(s) 346, 782, 1105, 1375, 1428
BspFNI CGCG 1 cut(s) 597
BspLI GGNNCC 3 cut(s) 575, 1197, 1307
BspMI ACCTGC 1 cut(s) 329
BspPI GGATC 3 cut(s) 214, 1190, 1203
BspT107I GGYRCC 1 cut(s) 1305
BsrBI CCGCTC 1 cut(s) 669
BsrDI GCAATG 5 cut(s) 135, 475, 514, 953, 1206
BsrFI RCCGGY 1 cut(s) 205
BsrGI TGTACA 1 cut(s) 1144
BsrI ACTGG 3 cut(s) 422, 589, 1289
BssAI RCCGGY 1 cut(s) 205
BssECI CCNNGG 2 cut(s) 422, 890
BssMI GATC 4 cut(s) 219, 567, 1195, 1230
BssNAI GTATAC 1 cut(s) 1077
BssT1I CCWWGG 1 cut(s) 422
Bst1107I GTATAC 1 cut(s) 1077
Bst2UI CCWGG 2 cut(s) 891, 1246
Bst4CI ACNGT 6 cut(s) 540, 785, 884, 1220, 1225, 1310
Bst6I CTCTTC 3 cut(s) 32, 41, 1275
BstAUI TGTACA 1 cut(s) 1144
BstC8I GCNNGC 2 cut(s) 203, 248
BstDEI CTNAG 5 cut(s) 354, 769, 1113, 1383, 1415
BstF5I GGATG 6 cut(s) 305, 428, 633, 1031, 1054, 1299
BstFNI CGCG 1 cut(s) 597
BstH2I RGCGCY 1 cut(s) 253
BstHHI GCGC 1 cut(s) 252
BstKTI GATC 4 cut(s) 222, 570, 1198, 1233
BstMAI GTCTC 4 cut(s) 38, 241, 700, 1405
BstMBI GATC 4 cut(s) 219, 567, 1195, 1230
BstNI CCWGG 2 cut(s) 891, 1246
BstNSI RCATGY 3 cut(s) 167, 179, 764
BstSCI CCNGG 2 cut(s) 889, 1244
BstUI CGCG 1 cut(s) 597
BstV1I GCAGC 2 cut(s) 314, 1095
BstV2I GAAGAC 1 cut(s) 1221
BstX2I RGATCY 1 cut(s) 1195
BstXI CCANNNNNNTGG 2 cut(s) 278, 509
BstYI RGATCY 1 cut(s) 1195
BstZ17I GTATAC 1 cut(s) 1077
Bsu36I CCTNAGG 1 cut(s) 1383
BsuRI GGCC 6 cut(s) 421, 427, 489, 534, 701, 1422
BtgZI GCGATG 1 cut(s) 488
BtsCI GGATG 6 cut(s) 305, 428, 633, 1031, 1054, 1299
BtsI GCAGTG 1 cut(s) 490
BtsIMutI CAGTG 1 cut(s) 490
BveI ACCTGC 1 cut(s) 329
Cac8I GCNNGC 2 cut(s) 203, 248
CfoI GCGC 1 cut(s) 252
Cfr10I RCCGGY 1 cut(s) 205
Cfr13I GGNCC 1 cut(s) 80
CseI GACGC 1 cut(s) 1003
Csp6I GTAC 6 cut(s) 182, 342, 758, 1145, 1221, 1306
CviAII CATG 6 cut(s) 164, 176, 761, 985, 1148, 1401
CviQI GTAC 6 cut(s) 182, 342, 758, 1145, 1221, 1306
DdeI CTNAG 5 cut(s) 354, 769, 1113, 1383, 1415
DpnI GATC 4 cut(s) 221, 569, 1197, 1232
DpnII GATC 4 cut(s) 219, 567, 1195, 1230
EaeI YGGCCR 1 cut(s) 419
Eam1104I CTCTTC 3 cut(s) 32, 41, 1275
EarI CTCTTC 3 cut(s) 32, 41, 1275
Ecl136II GAGCTC 2 cut(s) 157, 1255
Eco130I CCWWGG 1 cut(s) 422
Eco147I AGGCCT 1 cut(s) 1422
Eco24I GRGCYC 3 cut(s) 159, 464, 1257
Eco47I GGWCC 1 cut(s) 80
Eco53kI GAGCTC 2 cut(s) 157, 1255
Eco57I CTGAAG 2 cut(s) 13, 855
Eco81I CCTNAGG 1 cut(s) 1383
EcoICRI GAGCTC 2 cut(s) 157, 1255
EcoRII CCWGG 2 cut(s) 889, 1244
EcoT14I CCWWGG 1 cut(s) 422
EcoT38I GRGCYC 3 cut(s) 159, 464, 1257
ErhI CCWWGG 1 cut(s) 422
FaeI CATG 6 cut(s) 167, 179, 764, 988, 1151, 1404
FaqI GGGAC 3 cut(s) 7, 152, 859
FatI CATG 6 cut(s) 163, 175, 760, 984, 1147, 1400
FbaI TGATCA 1 cut(s) 1230
FblI GTMKAC 1 cut(s) 1076
Fnu4HI GCNGC 4 cut(s) 199, 303, 1109, 1273
FokI GGATG 6 cut(s) 292, 415, 640, 1038, 1061, 1286
FriOI GRGCYC 3 cut(s) 159, 464, 1257
Fsp4HI GCNGC 4 cut(s) 199, 303, 1109, 1273
FspBI CTAG 5 cut(s) 299, 452, 530, 966, 1370
GlaI GCGC 1 cut(s) 251
GluI GCNGC 4 cut(s) 199, 303, 1109, 1273
GsaI CCCAGC 1 cut(s) 1328
HaeII RGCGCY 1 cut(s) 253
HaeIII GGCC 6 cut(s) 421, 427, 489, 534, 701, 1422
HapII CCGG 2 cut(s) 206, 1303
HgaI GACGC 1 cut(s) 1003
HhaI GCGC 1 cut(s) 252
Hin1II CATG 6 cut(s) 167, 179, 764, 988, 1151, 1404
Hin6I GCGC 1 cut(s) 250
HinP1I GCGC 1 cut(s) 250
HindIII AAGCTT 1 cut(s) 801
HinfI GANTC 7 cut(s) 4, 434, 588, 1115, 1169, 1397, 1413
HpaII CCGG 2 cut(s) 206, 1303
HphI GGTGA 5 cut(s) 577, 739, 755, 1102, 1406
Hpy166II GTNNAC 2 cut(s) 887, 1077
Hpy188I TCNGA 9 cut(s) 268, 388, 433, 621, 706, 776, 835, 1252, 1418
Hpy188III TCNNGA 7 cut(s) 328, 369, 571, 944, 1046, 1061, 1313
Hpy8I GTNNAC 2 cut(s) 887, 1077
Hpy99I CGWCG 2 cut(s) 710, 713
HpyAV CCTTC 2 cut(s) 44, 112
HpyCH4III ACNGT 6 cut(s) 540, 785, 884, 1220, 1225, 1310
HpyCH4IV ACGT 2 cut(s) 559, 1055
HpyCH4V TGCA 5 cut(s) 468, 495, 733, 1211, 1296
HpyF3I CTNAG 5 cut(s) 354, 769, 1113, 1383, 1415
HpySE526I ACGT 2 cut(s) 559, 1055
Hsp92II CATG 6 cut(s) 167, 179, 764, 988, 1151, 1404
HspAI GCGC 1 cut(s) 250
KpnI GGTACC 1 cut(s) 1309
Ksp22I TGATCA 1 cut(s) 1230
Kzo9I GATC 4 cut(s) 219, 567, 1195, 1230
LmnI GCTCC 5 cut(s) 148, 154, 162, 860, 1252
Lsp1109I GCAGC 2 cut(s) 314, 1095
LweI GCATC 3 cut(s) 314, 720, 1336
MaeI CTAG 5 cut(s) 299, 452, 530, 966, 1370
MaeII ACGT 2 cut(s) 559, 1055
MaeIII GTNAC 4 cut(s) 360, 454, 878, 1051
MalI GATC 4 cut(s) 221, 569, 1197, 1232
MbiI CCGCTC 1 cut(s) 669
MboI GATC 4 cut(s) 219, 567, 1195, 1230
MflI RGATCY 1 cut(s) 1195
MhlI GDGCHC 3 cut(s) 159, 464, 1257
MlsI TGGCCA 1 cut(s) 421
MluNI TGGCCA 1 cut(s) 421
MlyI GAGTC 3 cut(s) 443, 1124, 1407
MmeI TCCRAC 6 cut(s) 184, 291, 319, 729, 767, 1230
Mox20I TGGCCA 1 cut(s) 421
MscI TGGCCA 1 cut(s) 421
MseI TTAA 5 cut(s) 798, 921, 1125, 1140, 1266
MslI CAYNNNNRTG 2 cut(s) 507, 989
Msp20I TGGCCA 1 cut(s) 421
MspI CCGG 2 cut(s) 206, 1303
MspR9I CCNGG 2 cut(s) 891, 1246
MvaI CCWGG 2 cut(s) 891, 1246
MvnI CGCG 1 cut(s) 597
NdeII GATC 4 cut(s) 219, 567, 1195, 1230
NlaIII CATG 6 cut(s) 167, 179, 764, 988, 1151, 1404
NlaIV GGNNCC 3 cut(s) 575, 1197, 1307
NmeAIII GCCGAG 1 cut(s) 677
NmuCI GTSAC 1 cut(s) 1051
NspI RCATGY 3 cut(s) 167, 179, 764
PceI AGGCCT 1 cut(s) 1422
PciI ACATGT 3 cut(s) 163, 175, 760
PcsI WCGNNNNNNNCGW 1 cut(s) 544
PfeI GAWTC 4 cut(s) 4, 588, 1169, 1397
PflMI CCANNNNNTGG 2 cut(s) 584, 786
PkrI GCNGC 4 cut(s) 200, 304, 1110, 1274
PleI GAGTC 3 cut(s) 442, 1123, 1407
PpsI GAGTC 3 cut(s) 442, 1123, 1407
PscI ACATGT 3 cut(s) 163, 175, 760
Psp124BI GAGCTC 2 cut(s) 159, 1257
Psp1406I AACGTT 1 cut(s) 559
Psp6I CCWGG 2 cut(s) 889, 1244
PspFI CCCAGC 1 cut(s) 1324
PspGI CCWGG 2 cut(s) 889, 1244
PspN4I GGNNCC 3 cut(s) 575, 1197, 1307
PspPI GGNCC 1 cut(s) 80
PsrI GAACNNNNNNTAC 2 cut(s) 165, 197
PsuI RGATCY 1 cut(s) 1195
RsaI GTAC 6 cut(s) 183, 343, 759, 1146, 1222, 1307
RsaNI GTAC 6 cut(s) 182, 342, 758, 1145, 1221, 1306
RseI CAYNNNNRTG 2 cut(s) 507, 989
SacI GAGCTC 2 cut(s) 159, 1257
SaqAI TTAA 5 cut(s) 798, 921, 1125, 1140, 1266
SatI GCNGC 4 cut(s) 199, 303, 1109, 1273
Sau3AI GATC 4 cut(s) 219, 567, 1195, 1230
Sau96I GGNCC 1 cut(s) 80
SchI GAGTC 3 cut(s) 443, 1124, 1407
ScrFI CCNGG 2 cut(s) 891, 1246
SduI GDGCHC 3 cut(s) 159, 464, 1257
SfaNI GCATC 3 cut(s) 314, 720, 1336
SinI GGWCC 1 cut(s) 80
SmiMI CAYNNNNRTG 2 cut(s) 507, 989
SmlI CTYRAG 3 cut(s) 1008, 1313, 1408
SmoI CTYRAG 3 cut(s) 1008, 1313, 1408
SseBI AGGCCT 1 cut(s) 1422
SsiI CCGC 6 cut(s) 199, 223, 595, 669, 823, 1273
SspMI CTAG 5 cut(s) 299, 452, 530, 966, 1370
SstI GAGCTC 2 cut(s) 159, 1257
StuI AGGCCT 1 cut(s) 1422
StyD4I CCNGG 2 cut(s) 889, 1244
StyI CCWWGG 1 cut(s) 422
TaaI ACNGT 6 cut(s) 540, 785, 884, 1220, 1225, 1310
TaiI ACGT 2 cut(s) 562, 1058
TaqI TCGA 3 cut(s) 370, 900, 1376
TaqII GACCGA 1 cut(s) 68
TatI WGTACW 3 cut(s) 181, 757, 1144
TauI GCSGC 2 cut(s) 201, 1275
TfiI GAWTC 4 cut(s) 4, 588, 1169, 1397
Tru1I TTAA 5 cut(s) 798, 921, 1125, 1140, 1266
Tru9I TTAA 5 cut(s) 798, 921, 1125, 1140, 1266
TscAI CASTG 1 cut(s) 497
TseFI GTSAC 1 cut(s) 1051
TseI GCWGC 2 cut(s) 302, 1108
Tsp45I GTSAC 1 cut(s) 1051
TspDTI ATGAA 8 cut(s) 17, 857, 990, 1109, 1161, 1195, 1377, 1389
TspGWI ACGGA 1 cut(s) 305
TspRI CASTG 1 cut(s) 497
Van91I CCANNNNNTGG 2 cut(s) 584, 786
VpaK11BI GGWCC 1 cut(s) 80
XapI RAATTY 4 cut(s) 517, 613, 635, 1082
XceI RCATGY 3 cut(s) 167, 179, 764
XcmI CCANNNNNNNNNTGG 1 cut(s) 825
XmiI GTMKAC 1 cut(s) 1076
XspI CTAG 5 cut(s) 299, 452, 530, 966, 1370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.