Rroxscaffold_3G00233260

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000139
Physical Location & Seq
Forward (+)
19219156 .. 19220406
1251 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00233260.1

Sequence Viewer

Length: 1251 bp
ATGTTGACGAAGGAGGAGCAGCTTGATGTCCACCTCCCCGAACATGTTGTGCGCAACATTCTCTGCCGGTTGCCATTCAAGTCCTTGATCCGCTTCACTTGTGTCTCTAAACGCTGGCGTTCTCTTATCATTTCTGACCCCCAATTTGCCAACTCCCATTTCCGACTAGCAGCATCTCAGCTCCGTCGAAATGTCCTCATCGCCATCCACCCATACCCTATCTTCATTTCAACAGGTACACTCGGAACACCCCCTACTATGTTACCCTCTCGATTTCAGTCCTTAGACGATAACTTTTCGGTCAAAAATCTCACCTTCCCATCCGAGCCGAATAGCGACATTGTATTAATGGGCTCCTGCAATGGGTTGGTAGTTTTAGGCAAGTTCGATCTCCATGAGGTACCTCTAGGCAAACTGTATTCTGATTTTTTTAAAATGTTGGTAATCTGGAACCCATCGACTGGATTCGTCCGCAAAATACCTAGTCCAAGTTTTCAGATTGGGATGATAGAATTGACAGATGAAAGGAAAGAGATGCACATAAACGGAGCATATTATGGTTTTGGTCAAGTGTTGCCCTCTGACGACTATAAACTTGTTGTGATAACCGATGCTGGTGGTGATCTTATGGAAGTACTTGTGTTTTCAGTCGGAGTCAACTGTTGGAAAGTTGTTAAAGCTCCTGACTTGTTGCCATCCCCCATCTGGTCTACAGCATTGGGGACTTATTCAAATGGGGCAATTCATTGGGCCAGTTTTCGCAATCCTGAGAGTTTCGAGCGACCTGTCTATGCTTTTGATTTGGCAAATGAGCAGTTCCGGGAAATGCCATTGCCTGTTCTTAGCCACAGCGAAGATGACATGAACAGGATTCGAATAACAACTCCGGTTCTCGTAGGAGGATGTCTTTGTGTGATGTTTCAGGATCTTAATGAGTATAGTGAATTTTGGGCGATGAAAGAGTATGGGGTGCCTGCATCTTGGGTTAAACTCTTTCGGTTAAATGTACGTGATTTACTAGATGTGCTTGCTCCATTCTTTATCCGCCGTTACTGGAATCCTATTTTCATTGCAGAAGACGGTACAGTTTTTACCCAACTGCATAACAATATGGAGTTGGTCAGGATTAAATGCCGTAAAGAAGAGAAGCCAGTCTGCACCGACCGGTATAGTCTTGAGGAGGTGCCAGGGTGTCATTGTTCATTTGATGCCATTTTGTATGATGAAACTCTTGTTTCGGTGCCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

416

Amino Acids

47.5

Weight (kDa)

5.75

Isoelectric Point (pI)

48.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 11 - 46 2.8e-11 F-box domain
F-box-like PF12937 11 - 46 7.3e-07 F-box-like
FBA_3 PF08268 115 - 284 1.3e-06 F-box associated beta propeller domain
FBA_1 PF07734 138 - 381 1.4e-13 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 53
Acc65I GGTACC 1 cut(s) 400
AccB1I GGYRCC 4 cut(s) 400, 970, 1183, 1240
AccB7I CCANNNNNTGG 1 cut(s) 461
AccI GTMKAC 1 cut(s) 710
AciI CCGC 3 cut(s) 91, 472, 1045
AclWI GGATC 2 cut(s) 82, 933
AcsI RAATTY 1 cut(s) 944
AfaI GTAC 5 cut(s) 238, 402, 636, 1008, 1084
AfiI CCNNNNNNNGG 3 cut(s) 363, 461, 705
AflIII ACRYGT 1 cut(s) 43
AgeI ACCGGT 1 cut(s) 1164
AgsI TTSAA 3 cut(s) 79, 231, 732
AjnI CCWGG 1 cut(s) 1186
AjuI GAANNNNNNNTTGG 2 cut(s) 143, 175
AluBI AGCT 3 cut(s) 22, 181, 680
AluI AGCT 3 cut(s) 22, 181, 680
Alw26I GTCTC 1 cut(s) 109
AlwI GGATC 2 cut(s) 82, 933
AoxI GGCC 1 cut(s) 750
ApeKI GCWGC 2 cut(s) 19, 170
ApoI RAATTY 1 cut(s) 944
ArsI GACNNNNNNTTYG 2 cut(s) 128, 160
AseI ATTAAT 1 cut(s) 347
AsiGI ACCGGT 1 cut(s) 1164
Asp718I GGTACC 1 cut(s) 400
AspLEI GCGC 1 cut(s) 54
AspS9I GGNCC 1 cut(s) 750
AsuC2I CCSGG 1 cut(s) 821
AsuHPI GGTGA 2 cut(s) 304, 632
AsuII TTCGAA 1 cut(s) 874
BanI GGYRCC 4 cut(s) 400, 970, 1183, 1240
BanII GRGCYC 1 cut(s) 356
BbsI GAAGAC 1 cut(s) 1083
BbvI GCAGC 2 cut(s) 31, 182
BccI CCATC 5 cut(s) 212, 328, 463, 703, 710
BceAI ACGGC 2 cut(s) 1032, 1119
BciT130I CCWGG 1 cut(s) 1188
BcnI CCSGG 1 cut(s) 821
BcoDI GTCTC 1 cut(s) 109
BfaI CTAG 4 cut(s) 167, 407, 483, 1019
BfmI CTRYAG 1 cut(s) 711
BisI GCNGC 2 cut(s) 20, 171
BlsI GCNGC 2 cut(s) 21, 172
BmcAI AGTACT 1 cut(s) 636
Bme1390I CCNGG 2 cut(s) 821, 1188
BmgT120I GGNCC 1 cut(s) 750
BmiI GGNNCC 6 cut(s) 355, 402, 452, 972, 1185, 1242
BmrFI CCNGG 2 cut(s) 821, 1188
BmsI GCATC 5 cut(s) 182, 525, 601, 986, 1198
BpiI GAAGAC 1 cut(s) 1083
Bpu14I TTCGAA 1 cut(s) 874
BpuEI CTTGAG 1 cut(s) 1196
BpuMI CCSGG 1 cut(s) 821
BsaAI YACGTR 1 cut(s) 1010
BsaJI CCNNGG 1 cut(s) 1187
BsaWI WCCGGW 2 cut(s) 886, 1164
Bsc4I CCNNNNNNNGG 3 cut(s) 363, 461, 705
Bse118I RCCGGY 2 cut(s) 66, 1164
Bse1I ACTGG 4 cut(s) 466, 753, 1058, 1151
Bse3DI GCAATG 3 cut(s) 367, 830, 1068
BseBI CCWGG 1 cut(s) 1188
BseDI CCNNGG 1 cut(s) 1187
BseGI GGATG 5 cut(s) 204, 320, 510, 695, 908
BseLI CCNNNNNNNGG 3 cut(s) 363, 461, 705
BseMI GCAATG 3 cut(s) 367, 830, 1068
BseMII CTCAG 2 cut(s) 191, 759
BseNI ACTGG 4 cut(s) 466, 753, 1058, 1151
BseRI GAGGAG 2 cut(s) 29, 1193
BseXI GCAGC 2 cut(s) 31, 182
BsgI GTGCAG 1 cut(s) 1141
Bsh1285I CGRYCG 1 cut(s) 1165
BshFI GGCC 1 cut(s) 752
BshNI GGYRCC 4 cut(s) 400, 970, 1183, 1240
BshTI ACCGGT 1 cut(s) 1164
BsiEI CGRYCG 1 cut(s) 1165
BsiSI CCGG 4 cut(s) 67, 820, 887, 1165
BslFI GGGAC 1 cut(s) 736
BslI CCNNNNNNNGG 3 cut(s) 363, 461, 705
BsmAI GTCTC 1 cut(s) 109
BsmFI GGGAC 1 cut(s) 736
BsnI GGCC 1 cut(s) 752
Bsp119I TTCGAA 1 cut(s) 874
Bsp1286I GDGCHC 1 cut(s) 356
Bsp143I GATC 4 cut(s) 87, 388, 622, 925
BspACI CCGC 3 cut(s) 91, 472, 1045
BspANI GGCC 1 cut(s) 752
BspCNI CTCAG 2 cut(s) 190, 760
BspLI GGNNCC 6 cut(s) 355, 402, 452, 972, 1185, 1242
BspPI GGATC 2 cut(s) 82, 933
BspT104I TTCGAA 1 cut(s) 874
BspT107I GGYRCC 4 cut(s) 400, 970, 1183, 1240
BsrDI GCAATG 3 cut(s) 367, 830, 1068
BsrFI RCCGGY 2 cut(s) 66, 1164
BsrI ACTGG 4 cut(s) 466, 753, 1058, 1151
BssAI RCCGGY 2 cut(s) 66, 1164
BssECI CCNNGG 1 cut(s) 1187
BssMI GATC 4 cut(s) 87, 388, 622, 925
Bst2UI CCWGG 1 cut(s) 1188
Bst4CI ACNGT 4 cut(s) 417, 662, 1082, 1087
Bst6I CTCTTC 1 cut(s) 1137
BstBAI YACGTR 1 cut(s) 1010
BstBI TTCGAA 1 cut(s) 874
BstC8I GCNNGC 3 cut(s) 116, 975, 1029
BstDEI CTNAG 4 cut(s) 177, 283, 768, 842
BstF5I GGATG 5 cut(s) 204, 320, 510, 695, 908
BstHHI GCGC 1 cut(s) 54
BstKTI GATC 4 cut(s) 90, 391, 625, 928
BstMAI GTCTC 1 cut(s) 109
BstMBI GATC 4 cut(s) 87, 388, 622, 925
BstMCI CGRYCG 1 cut(s) 1165
BstNI CCWGG 1 cut(s) 1188
BstNSI RCATGY 1 cut(s) 47
BstSCI CCNGG 2 cut(s) 819, 1186
BstSFI CTRYAG 1 cut(s) 711
BstV1I GCAGC 2 cut(s) 31, 182
BstV2I GAAGAC 1 cut(s) 1083
BstX2I RGATCY 1 cut(s) 925
BstYI RGATCY 1 cut(s) 925
BsuRI GGCC 1 cut(s) 752
BtgZI GCGATG 2 cut(s) 184, 968
BtsCI GGATG 5 cut(s) 204, 320, 510, 695, 908
Cac8I GCNNGC 3 cut(s) 116, 975, 1029
CfoI GCGC 1 cut(s) 54
Cfr10I RCCGGY 2 cut(s) 66, 1164
Cfr13I GGNCC 1 cut(s) 750
Csp6I GTAC 5 cut(s) 237, 401, 635, 1007, 1083
CspAI ACCGGT 1 cut(s) 1164
CviAII CATG 3 cut(s) 44, 395, 862
CviJI RGCY 8 cut(s) 22, 181, 328, 354, 680, 752, 846, 1150
CviKI_1 RGCY 8 cut(s) 22, 181, 328, 354, 680, 752, 846, 1150
CviQI GTAC 5 cut(s) 237, 401, 635, 1007, 1083
DdeI CTNAG 4 cut(s) 177, 283, 768, 842
DpnI GATC 4 cut(s) 89, 390, 624, 927
DpnII GATC 4 cut(s) 87, 388, 622, 925
DraI TTTAAA 1 cut(s) 433
Eam1104I CTCTTC 1 cut(s) 1137
EarI CTCTTC 1 cut(s) 1137
EciI GGCGGA 1 cut(s) 1034
Eco24I GRGCYC 1 cut(s) 356
EcoRII CCWGG 1 cut(s) 1186
EcoT38I GRGCYC 1 cut(s) 356
FaeI CATG 3 cut(s) 47, 398, 865
FaqI GGGAC 1 cut(s) 736
FatI CATG 3 cut(s) 43, 394, 861
FblI GTMKAC 1 cut(s) 710
Fnu4HI GCNGC 2 cut(s) 20, 171
FokI GGATG 5 cut(s) 191, 307, 517, 682, 915
FriOI GRGCYC 1 cut(s) 356
Fsp4HI GCNGC 2 cut(s) 20, 171
FspBI CTAG 4 cut(s) 167, 407, 483, 1019
FspI TGCGCA 1 cut(s) 53
GlaI GCGC 1 cut(s) 53
GluI GCNGC 2 cut(s) 20, 171
HaeIII GGCC 1 cut(s) 752
HapII CCGG 4 cut(s) 67, 820, 887, 1165
HhaI GCGC 1 cut(s) 54
Hin1II CATG 3 cut(s) 47, 398, 865
Hin6I GCGC 1 cut(s) 52
HinP1I GCGC 1 cut(s) 52
HincII GTYRAC 2 cut(s) 6, 658
HindII GTYRAC 2 cut(s) 6, 658
HinfI GANTC 4 cut(s) 465, 654, 871, 1057
HpaII CCGG 4 cut(s) 67, 820, 887, 1165
HphI GGTGA 2 cut(s) 304, 632
Hpy166II GTNNAC 5 cut(s) 6, 31, 239, 658, 711
Hpy188I TCNGA 8 cut(s) 136, 164, 245, 325, 424, 498, 583, 653
Hpy188III TCNNGA 7 cut(s) 270, 448, 683, 767, 923, 1123, 1175
Hpy8I GTNNAC 5 cut(s) 6, 31, 239, 658, 711
Hpy99I CGWCG 1 cut(s) 189
HpyAV CCTTC 2 cut(s) 4, 325
HpyCH4III ACNGT 4 cut(s) 417, 662, 1082, 1087
HpyCH4IV ACGT 1 cut(s) 1009
HpyCH4V TGCA 6 cut(s) 360, 538, 977, 1073, 1102, 1158
HpyF3I CTNAG 4 cut(s) 177, 283, 768, 842
HpySE526I ACGT 1 cut(s) 1009
Hsp92II CATG 3 cut(s) 47, 398, 865
HspAI GCGC 1 cut(s) 52
KpnI GGTACC 1 cut(s) 404
Kzo9I GATC 4 cut(s) 87, 388, 622, 925
LmnI GCTCC 6 cut(s) 16, 186, 359, 548, 685, 1036
Lsp1109I GCAGC 2 cut(s) 31, 182
LweI GCATC 5 cut(s) 182, 525, 601, 986, 1198
MaeI CTAG 4 cut(s) 167, 407, 483, 1019
MaeII ACGT 1 cut(s) 1009
MaeIII GTNAC 2 cut(s) 261, 1049
MalI GATC 4 cut(s) 89, 390, 624, 927
MboI GATC 4 cut(s) 87, 388, 622, 925
MboII GAAGA 4 cut(s) 214, 866, 1088, 1154
MflI RGATCY 1 cut(s) 925
MhlI GDGCHC 1 cut(s) 356
MluCI AATT 4 cut(s) 143, 512, 741, 944
MlyI GAGTC 1 cut(s) 663
MmeI TCCRAC 3 cut(s) 187, 631, 644
MseI TTAA 7 cut(s) 347, 432, 675, 930, 987, 1001, 1128
MspI CCGG 4 cut(s) 67, 820, 887, 1165
MspR9I CCNGG 2 cut(s) 821, 1188
MvaI CCWGG 1 cut(s) 1188
NciI CCSGG 1 cut(s) 821
NdeII GATC 4 cut(s) 87, 388, 622, 925
NlaIII CATG 3 cut(s) 47, 398, 865
NlaIV GGNNCC 6 cut(s) 355, 402, 452, 972, 1185, 1242
NsbI TGCGCA 1 cut(s) 53
NspI RCATGY 1 cut(s) 47
NspV TTCGAA 1 cut(s) 874
PciI ACATGT 1 cut(s) 43
PfeI GAWTC 3 cut(s) 465, 871, 1057
PflMI CCANNNNNTGG 1 cut(s) 461
PfoI TCCNGGA 1 cut(s) 819
PinAI ACCGGT 1 cut(s) 1164
PkrI GCNGC 2 cut(s) 21, 172
PleI GAGTC 1 cut(s) 662
PpsI GAGTC 1 cut(s) 662
Ppu21I YACGTR 1 cut(s) 1010
PscI ACATGT 1 cut(s) 43
PshBI ATTAAT 1 cut(s) 347
Psp6I CCWGG 1 cut(s) 1186
PspGI CCWGG 1 cut(s) 1186
PspN4I GGNNCC 6 cut(s) 355, 402, 452, 972, 1185, 1242
PspPI GGNCC 1 cut(s) 750
PsrI GAACNNNNNNTAC 2 cut(s) 238, 270
PsuI RGATCY 1 cut(s) 925
RsaI GTAC 5 cut(s) 238, 402, 636, 1008, 1084
RsaNI GTAC 5 cut(s) 237, 401, 635, 1007, 1083
SaqAI TTAA 7 cut(s) 347, 432, 675, 930, 987, 1001, 1128
SatI GCNGC 2 cut(s) 20, 171
Sau3AI GATC 4 cut(s) 87, 388, 622, 925
Sau96I GGNCC 1 cut(s) 750
ScaI AGTACT 1 cut(s) 636
SchI GAGTC 1 cut(s) 663
ScrFI CCNGG 2 cut(s) 821, 1188
SduI GDGCHC 1 cut(s) 356
SfaNI GCATC 5 cut(s) 182, 525, 601, 986, 1198
SfcI CTRYAG 1 cut(s) 711
SfuI TTCGAA 1 cut(s) 874
SmlI CTYRAG 1 cut(s) 1175
SmoI CTYRAG 1 cut(s) 1175
Sse9I AATT 4 cut(s) 143, 512, 741, 944
SsiI CCGC 3 cut(s) 91, 472, 1045
SspMI CTAG 4 cut(s) 167, 407, 483, 1019
StyD4I CCNGG 2 cut(s) 819, 1186
TaaI ACNGT 4 cut(s) 417, 662, 1082, 1087
TaiI ACGT 1 cut(s) 1012
TaqI TCGA 6 cut(s) 187, 271, 387, 458, 777, 874
TaqII GACCGA 1 cut(s) 289
TasI AATT 4 cut(s) 143, 512, 741, 944
TatI WGTACW 1 cut(s) 634
TfiI GAWTC 3 cut(s) 465, 871, 1057
Tru1I TTAA 7 cut(s) 347, 432, 675, 930, 987, 1001, 1128
Tru9I TTAA 7 cut(s) 347, 432, 675, 930, 987, 1001, 1128
TseI GCWGC 2 cut(s) 19, 170
TspDTI ATGAA 8 cut(s) 214, 537, 734, 878, 971, 1057, 1191, 1239
TspGWI ACGGA 2 cut(s) 173, 561
Van91I CCANNNNNTGG 1 cut(s) 461
VspI ATTAAT 1 cut(s) 347
XapI RAATTY 1 cut(s) 944
XceI RCATGY 1 cut(s) 47
XcmI CCANNNNNNNNNTGG 1 cut(s) 702
XmiI GTMKAC 1 cut(s) 710
XspI CTAG 4 cut(s) 167, 407, 483, 1019
ZrmI AGTACT 1 cut(s) 636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.