Rorug05G0435100

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000139
Physical Location & Seq
Reverse (-)
60391280 .. 60396100
4821 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0435100.1

Sequence Viewer

Length: 1608 bp
ATGGCCTCATCTAATACTCGGATGATTCAGATGATGGTTTGGGTGAAAATCGCTGTTCTGCAGAAGACGCATTTACTGACCGGATATGCAATGGGCACAATGATTACATACTTGACTAGTGTATGGAAGTTAAATCTCACAGATGCTGCCGCTGTCGTCAATGTGTATGCCGGCGCAGTGGCCGTAATGCCACTGGGCATGCTTTTTGTTGTTGATACTGTAATCGGTAACTATTGGTTGATCATACTCTCCGGTTGTGCTTACACCATGGGGTTTTTCCTCTTGACCATGTCAACACCACCAGTTCTTTATAGGGCAACAGGCACTTGTGGAGCATATGAGGCCGAGTGCATTGGCAAAGTACAAAAGATTCTCTTTTACACAGCCTTAACTCTAATAGCTCTGGGAGCCTCTGGTCGCTTTATGGTTCGTGCATTCAGAGAAGAGCAGTTGATCAAGCCACTATTAGAAGGCGCCAAAAAAATGAAGTTCTTTGCTCTGTCAGTGTGCCCTAAGAAAGTAAGGTTGCTGTCATTTCAAATTCTGGTCTCCACCCTGGTACTCGGGACAACTGCTTATTTAAAGCCTTGGTCGCTTAGGTTTGGGTTCCCTGCTATATTTACCTTGCTTGCAACAATTACTTTATTGACAAGTACTATACGTCCACACAAAGCACAAAGGAACCTTTTCACCAGGGAAGAAATCAGAAGCATCTTGCGCATGAGTCCTATATGTATTTTCCTTATTCCAATTGGTGTTGTATCGTCTCTTGGAAATACTTATTTCACTGAACAAGCAAGCAAGATGAATCACAGGGTTGGATCCTTAAAGGTTTCTGTTCTTTTCCTTTTAGTGCCCCGAAGTTTGGTCAGAAAATGGTTTAGCCAATCAAAATATTGTGCTAATAAGATTATTACTCCAAGAATTGGGATTTCATTGTCGATGGCATTGGCGATTCTATGTTGTATCACAGCTGCATTAGTGGAAAACAGAAGGTTGGGCGTGGTTAAGAGACATGGTTTACTTAACAAGCCCGATGAGACAGTTCCCATGACCATGTTATGGTTGCTTCCACAGTTTCTTCTCGTTGGAGGCGTTTCTGGGCTTTCCGAGAAGTGCATTGCTCTTTTCTACACTGATGTGGTGCTTCACTGGCCGAAAATAGAAAAAGATGTCGATATACAAGCAAAGGACAAACCCAATTCCAAAGAACAAAACATTAAGTCCCCCATGGAACAGGCAAACGAAACACTCAAGCCTACAGAAAAGAATGATGAGGACCCCAATCAGGCAAAACAAGAAACAAATAGTACAGAAAAAGATGGTGAGGGGCACATTGATCCCGAAAGGGCAAAACAAAAATCCAAGCGTCAATACATAGAGTTTTTTGTTGATGCTCTTGAGGGAATGGGAAATATAGGCAGTGTGGTGTTGGTCTATGTAGTGGGTGAAATAAAACCTACTTGGTTCCAAGAAACGGTAAACCGAAGTCATTTGGATAATTATTACTGGACTTTGGCTGCATTGACTGCAGCTAATTTGATATTGTTTATTCCAGTAATATTCTACCTGTTGAGGTCAAAGAAATTCACTGCATTGTTTGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

535

Amino Acids

59.92

Weight (kDa)

9.54

Isoelectric Point (pI)

37.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTR2 PF00854 232 - 364 3.4e-07 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 719
AccB1I GGYRCC 1 cut(s) 473
AccB7I CCANNNNNTGG 2 cut(s) 926, 1062
AciI CCGC 1 cut(s) 150
AclWI GGATC 3 cut(s) 816, 829, 1334
AcoI YGGCCR 2 cut(s) 180, 1154
AcsI RAATTY 2 cut(s) 540, 1586
AcyI GRCGYC 1 cut(s) 474
AfaI GTAC 4 cut(s) 363, 561, 655, 1312
AfiI CCNNNNNNNGG 5 cut(s) 865, 926, 1062, 1288, 1477
AgsI TTSAA 1 cut(s) 539
AhlI ACTAGT 1 cut(s) 116
AjnI CCWGG 2 cut(s) 555, 692
AleI CACNNNNGTG 1 cut(s) 1139
AluBI AGCT 3 cut(s) 401, 974, 1535
AluI AGCT 3 cut(s) 401, 974, 1535
Alw26I GTCTC 4 cut(s) 553, 771, 1006, 1034
AlwI GGATC 3 cut(s) 816, 829, 1334
AlwNI CAGNNNCTG 1 cut(s) 146
Ama87I CYCGRG 1 cut(s) 563
AoxI GGCC 4 cut(s) 3, 180, 342, 1154
ApeKI GCWGC 4 cut(s) 146, 974, 1520, 1532
ApoI RAATTY 2 cut(s) 540, 1586
Asp700I GAANNNNTTC 1 cut(s) 686
AspLEI GCGC 3 cut(s) 176, 476, 720
AspS9I GGNCC 1 cut(s) 1279
AsuHPI GGTGA 4 cut(s) 55, 682, 1337, 1460
AvaI CYCGRG 1 cut(s) 563
AvaII GGWCC 1 cut(s) 1279
BaeGI GKGCMC 4 cut(s) 98, 512, 858, 1335
BamHI GGATCC 1 cut(s) 821
BanI GGYRCC 1 cut(s) 473
BbsI GAAGAC 1 cut(s) 71
BbvI GCAGC 4 cut(s) 133, 961, 1507, 1544
BccI CCATC 3 cut(s) 28, 937, 1316
BceAI ACGGC 1 cut(s) 167
BciT130I CCWGG 2 cut(s) 557, 694
BclI TGATCA 2 cut(s) 240, 453
BcoDI GTCTC 4 cut(s) 553, 771, 1006, 1034
BcuI ACTAGT 1 cut(s) 116
BfaI CTAG 1 cut(s) 117
BfmI CTRYAG 3 cut(s) 59, 1260, 1530
BfoI RGCGCY 1 cut(s) 477
BisI GCNGC 5 cut(s) 147, 150, 975, 1521, 1533
BlsI GCNGC 5 cut(s) 148, 151, 976, 1522, 1534
BmcAI AGTACT 1 cut(s) 655
Bme1390I CCNGG 2 cut(s) 557, 694
Bme18I GGWCC 1 cut(s) 1279
BmeT110I CYCGRG 1 cut(s) 563
BmgT120I GGNCC 1 cut(s) 1279
BmiI GGNNCC 7 cut(s) 409, 475, 608, 683, 823, 1281, 1469
BmrFI CCNGG 2 cut(s) 557, 694
BmrI ACTGGG 1 cut(s) 203
BmsI GCATC 3 cut(s) 133, 720, 1384
BmuI ACTGGG 1 cut(s) 203
BpiI GAAGAC 1 cut(s) 71
Bpu10I CCTNAGC 1 cut(s) 596
BpuEI CTTGAG 2 cut(s) 1238, 1421
BsaHI GRCGYC 1 cut(s) 474
BsaI GGTCTC 1 cut(s) 553
BsaJI CCNNGG 5 cut(s) 267, 555, 587, 693, 1230
BsaWI WCCGGW 2 cut(s) 80, 251
Bsc4I CCNNNNNNNGG 5 cut(s) 865, 926, 1062, 1288, 1477
Bse118I RCCGGY 1 cut(s) 170
Bse1I ACTGG 5 cut(s) 198, 302, 1157, 1514, 1556
Bse3DI GCAATG 2 cut(s) 96, 1119
BseBI CCWGG 2 cut(s) 557, 694
BseDI CCNNGG 5 cut(s) 267, 555, 587, 693, 1230
BseGI GGATG 1 cut(s) 27
BseLI CCNNNNNNNGG 5 cut(s) 865, 926, 1062, 1288, 1477
BseMI GCAATG 2 cut(s) 96, 1119
BseNI ACTGG 5 cut(s) 198, 302, 1157, 1514, 1556
BseSI GKGCMC 4 cut(s) 98, 512, 858, 1335
BseXI GCAGC 4 cut(s) 133, 961, 1507, 1544
BshFI GGCC 4 cut(s) 5, 182, 344, 1156
BshNI GGYRCC 1 cut(s) 473
BsiHKCI CYCGRG 1 cut(s) 563
BsiSI CCGG 3 cut(s) 81, 171, 252
BslFI GGGAC 2 cut(s) 580, 1210
BslI CCNNNNNNNGG 5 cut(s) 865, 926, 1062, 1288, 1477
BsmAI GTCTC 4 cut(s) 553, 771, 1006, 1034
BsmBI CGTCTC 1 cut(s) 771
BsmFI GGGAC 2 cut(s) 580, 1210
BsmI GAATGC 1 cut(s) 434
BsnI GGCC 4 cut(s) 5, 182, 344, 1156
Bso31I GGTCTC 1 cut(s) 553
BsoBI CYCGRG 1 cut(s) 563
Bsp1286I GDGCHC 4 cut(s) 98, 512, 858, 1335
Bsp143I GATC 4 cut(s) 240, 453, 821, 1339
Bsp19I CCATGG 2 cut(s) 267, 1230
BspACI CCGC 1 cut(s) 150
BspANI GGCC 4 cut(s) 5, 182, 344, 1156
BspLI GGNNCC 7 cut(s) 409, 475, 608, 683, 823, 1281, 1469
BspMAI CTGCAG 2 cut(s) 63, 1534
BspPI GGATC 3 cut(s) 816, 829, 1334
BspQI GCTCTTC 1 cut(s) 438
BspT107I GGYRCC 1 cut(s) 473
BspTNI GGTCTC 1 cut(s) 553
BsrDI GCAATG 2 cut(s) 96, 1119
BsrFI RCCGGY 1 cut(s) 170
BsrI ACTGG 5 cut(s) 198, 302, 1157, 1514, 1556
BssAI RCCGGY 1 cut(s) 170
BssECI CCNNGG 5 cut(s) 267, 555, 587, 693, 1230
BssMI GATC 4 cut(s) 240, 453, 821, 1339
BssNI GRCGYC 1 cut(s) 474
BssT1I CCWWGG 3 cut(s) 267, 587, 1230
Bst2UI CCWGG 2 cut(s) 557, 694
Bst4CI ACNGT 4 cut(s) 220, 1045, 1077, 1480
Bst6I CTCTTC 1 cut(s) 438
BstACI GRCGYC 1 cut(s) 474
BstAPI GCANNNNNTGC 2 cut(s) 1529, 1601
BstC8I GCNNGC 4 cut(s) 172, 200, 630, 799
BstDEI CTNAG 2 cut(s) 513, 596
BstDSI CCRYGG 2 cut(s) 267, 1230
BstF5I GGATG 1 cut(s) 27
BstH2I RGCGCY 1 cut(s) 477
BstHHI GCGC 3 cut(s) 176, 476, 720
BstKTI GATC 4 cut(s) 243, 456, 824, 1342
BstMAI GTCTC 4 cut(s) 553, 771, 1006, 1034
BstMBI GATC 4 cut(s) 240, 453, 821, 1339
BstMWI GCNNNNNNNGC 8 cut(s) 67, 341, 407, 592, 717, 1153, 1529, 1601
BstNI CCWGG 2 cut(s) 557, 694
BstNSI RCATGY 1 cut(s) 202
BstSCI CCNGG 2 cut(s) 555, 692
BstSFI CTRYAG 3 cut(s) 59, 1260, 1530
BstSLI GKGCMC 4 cut(s) 98, 512, 858, 1335
BstV1I GCAGC 4 cut(s) 133, 961, 1507, 1544
BstV2I GAAGAC 1 cut(s) 71
BstX2I RGATCY 1 cut(s) 821
BstYI RGATCY 1 cut(s) 821
BsuRI GGCC 4 cut(s) 5, 182, 344, 1156
BtgI CCRYGG 2 cut(s) 267, 1230
BtsCI GGATG 1 cut(s) 27
BtsI GCAGTG 3 cut(s) 183, 1429, 1590
BtsIMutI CAGTG 8 cut(s) 183, 191, 510, 786, 1134, 1150, 1429, 1590
Cac8I GCNNGC 4 cut(s) 172, 200, 630, 799
CaiI CAGNNNCTG 1 cut(s) 146
CfoI GCGC 3 cut(s) 176, 476, 720
Cfr10I RCCGGY 1 cut(s) 170
Cfr13I GGNCC 1 cut(s) 1279
CseI GACGC 2 cut(s) 76, 1358
Csp6I GTAC 4 cut(s) 362, 560, 654, 1311
CviAII CATG 8 cut(s) 199, 268, 289, 721, 1016, 1051, 1057, 1231
CviQI GTAC 4 cut(s) 362, 560, 654, 1311
DdeI CTNAG 2 cut(s) 513, 596
DinI GGCGCC 1 cut(s) 475
DpnI GATC 4 cut(s) 242, 455, 823, 1341
DpnII GATC 4 cut(s) 240, 453, 821, 1339
DraI TTTAAA 1 cut(s) 582
EaeI YGGCCR 2 cut(s) 180, 1154
Eam1104I CTCTTC 1 cut(s) 438
EarI CTCTTC 1 cut(s) 438
Eco130I CCWWGG 3 cut(s) 267, 587, 1230
Eco31I GGTCTC 1 cut(s) 553
Eco47I GGWCC 1 cut(s) 1279
Eco88I CYCGRG 1 cut(s) 563
EcoO109I RGGNCCY 1 cut(s) 1279
EcoRII CCWGG 2 cut(s) 555, 692
EcoT14I CCWWGG 3 cut(s) 267, 587, 1230
EgeI GGCGCC 1 cut(s) 475
EheI GGCGCC 1 cut(s) 475
ErhI CCWWGG 3 cut(s) 267, 587, 1230
Esp3I CGTCTC 1 cut(s) 771
FaeI CATG 8 cut(s) 202, 271, 292, 724, 1019, 1054, 1060, 1234
FalI AAGNNNNNCTT 2 cut(s) 359, 391
FaqI GGGAC 2 cut(s) 580, 1210
FatI CATG 8 cut(s) 198, 267, 288, 720, 1015, 1050, 1056, 1230
FauNDI CATATG 1 cut(s) 337
FbaI TGATCA 2 cut(s) 240, 453
Fnu4HI GCNGC 5 cut(s) 147, 150, 975, 1521, 1533
FokI GGATG 1 cut(s) 34
Fsp4HI GCNGC 5 cut(s) 147, 150, 975, 1521, 1533
FspBI CTAG 1 cut(s) 117
FspI TGCGCA 1 cut(s) 719
GlaI GCGC 3 cut(s) 175, 475, 719
GluI GCNGC 5 cut(s) 147, 150, 975, 1521, 1533
HaeII RGCGCY 1 cut(s) 477
HaeIII GGCC 4 cut(s) 5, 182, 344, 1156
HapII CCGG 3 cut(s) 81, 171, 252
HgaI GACGC 2 cut(s) 76, 1358
HhaI GCGC 3 cut(s) 176, 476, 720
Hin1I GRCGYC 1 cut(s) 474
Hin1II CATG 8 cut(s) 202, 271, 292, 724, 1019, 1054, 1060, 1234
Hin6I GCGC 3 cut(s) 174, 474, 718
HinP1I GCGC 3 cut(s) 174, 474, 718
HincII GTYRAC 1 cut(s) 294
HindII GTYRAC 1 cut(s) 294
HinfI GANTC 5 cut(s) 25, 370, 724, 808, 955
HpaII CCGG 3 cut(s) 81, 171, 252
HphI GGTGA 4 cut(s) 55, 682, 1337, 1460
Hpy166II GTNNAC 4 cut(s) 294, 665, 1022, 1483
Hpy188I TCNGA 6 cut(s) 21, 30, 440, 707, 872, 1111
Hpy188III TCNNGA 4 cut(s) 283, 565, 1343, 1400
Hpy8I GTNNAC 4 cut(s) 294, 665, 1022, 1483
HpyAV CCTTC 2 cut(s) 464, 987
HpyCH4III ACNGT 4 cut(s) 220, 1045, 1077, 1480
HpyCH4IV ACGT 1 cut(s) 661
HpyF10VI GCNNNNNNNGC 8 cut(s) 67, 341, 407, 592, 717, 1153, 1529, 1601
HpyF3I CTNAG 2 cut(s) 513, 596
HpySE526I ACGT 1 cut(s) 661
Hsp92I GRCGYC 1 cut(s) 474
Hsp92II CATG 8 cut(s) 202, 271, 292, 724, 1019, 1054, 1060, 1234
HspAI GCGC 3 cut(s) 174, 474, 718
KasI GGCGCC 1 cut(s) 473
KroI GCCGGC 1 cut(s) 170
KroNI GCCGGC 1 cut(s) 172
Ksp22I TGATCA 2 cut(s) 240, 453
Kzo9I GATC 4 cut(s) 240, 453, 821, 1339
LguI GCTCTTC 1 cut(s) 438
LmnI GCTCC 2 cut(s) 332, 407
Lsp1109I GCAGC 4 cut(s) 133, 961, 1507, 1544
LweI GCATC 3 cut(s) 133, 720, 1384
MaeI CTAG 1 cut(s) 117
MaeII ACGT 1 cut(s) 661
MaeIII GTNAC 1 cut(s) 227
MalI GATC 4 cut(s) 242, 455, 823, 1341
MboI GATC 4 cut(s) 240, 453, 821, 1339
MboII GAAGA 4 cut(s) 76, 455, 710, 1073
MfeI CAATTG 1 cut(s) 750
MflI RGATCY 1 cut(s) 821
MhlI GDGCHC 4 cut(s) 98, 512, 858, 1335
MluCI AATT 8 cut(s) 540, 636, 750, 924, 1201, 1501, 1537, 1586
Mly113I GGCGCC 1 cut(s) 474
MlyI GAGTC 1 cut(s) 733
MmeI TCCRAC 2 cut(s) 799, 1069
MnlI CCTC 9 cut(s) 16, 290, 334, 421, 1085, 1270, 1321, 1396, 1569
MroNI GCCGGC 1 cut(s) 170
MroXI GAANNNNTTC 1 cut(s) 686
MseI TTAA 7 cut(s) 131, 389, 581, 827, 1008, 1026, 1221
MslI CAYNNNNRTG 2 cut(s) 1055, 1139
MspA1I CMGCKG 2 cut(s) 152, 974
MspI CCGG 3 cut(s) 81, 171, 252
MspR9I CCNGG 2 cut(s) 557, 694
MunI CAATTG 1 cut(s) 750
Mva1269I GAATGC 1 cut(s) 434
MvaI CCWGG 2 cut(s) 557, 694
MwoI GCNNNNNNNGC 8 cut(s) 67, 341, 407, 592, 717, 1153, 1529, 1601
NaeI GCCGGC 1 cut(s) 172
NarI GGCGCC 1 cut(s) 474
NcoI CCATGG 2 cut(s) 267, 1230
NdeI CATATG 1 cut(s) 337
NdeII GATC 4 cut(s) 240, 453, 821, 1339
NgoMIV GCCGGC 1 cut(s) 170
NlaIII CATG 8 cut(s) 202, 271, 292, 724, 1019, 1054, 1060, 1234
NlaIV GGNNCC 7 cut(s) 409, 475, 608, 683, 823, 1281, 1469
NmeAIII GCCGAG 1 cut(s) 370
NsbI TGCGCA 1 cut(s) 719
NspI RCATGY 1 cut(s) 202
OliI CACNNNNGTG 1 cut(s) 1139
PaeI GCATGC 1 cut(s) 202
PciSI GCTCTTC 1 cut(s) 438
PcsI WCGNNNNNNNCGW 1 cut(s) 1092
PctI GAATGC 1 cut(s) 434
PdiI GCCGGC 1 cut(s) 172
PdmI GAANNNNTTC 1 cut(s) 686
PfeI GAWTC 4 cut(s) 25, 370, 808, 955
PflFI GACNNNGTC 1 cut(s) 289
PflMI CCANNNNNTGG 2 cut(s) 926, 1062
PkrI GCNGC 5 cut(s) 148, 151, 976, 1522, 1534
PleI GAGTC 1 cut(s) 732
PluTI GGCGCC 1 cut(s) 477
PpsI GAGTC 1 cut(s) 732
PpuMI RGGWCCY 1 cut(s) 1279
Psp5II RGGWCCY 1 cut(s) 1279
Psp6I CCWGG 2 cut(s) 555, 692
PspGI CCWGG 2 cut(s) 555, 692
PspN4I GGNNCC 7 cut(s) 409, 475, 608, 683, 823, 1281, 1469
PspPI GGNCC 1 cut(s) 1279
PspPPI RGGWCCY 1 cut(s) 1279
PstI CTGCAG 2 cut(s) 63, 1534
PstNI CAGNNNCTG 1 cut(s) 146
PsuI RGATCY 1 cut(s) 821
PsyI GACNNNGTC 1 cut(s) 289
PvuII CAGCTG 1 cut(s) 974
RsaI GTAC 4 cut(s) 363, 561, 655, 1312
RsaNI GTAC 4 cut(s) 362, 560, 654, 1311
RseI CAYNNNNRTG 2 cut(s) 1055, 1139
SapI GCTCTTC 1 cut(s) 438
SaqAI TTAA 7 cut(s) 131, 389, 581, 827, 1008, 1026, 1221
SatI GCNGC 5 cut(s) 147, 150, 975, 1521, 1533
Sau3AI GATC 4 cut(s) 240, 453, 821, 1339
Sau96I GGNCC 1 cut(s) 1279
ScaI AGTACT 1 cut(s) 655
SchI GAGTC 1 cut(s) 733
ScrFI CCNGG 2 cut(s) 557, 694
SduI GDGCHC 4 cut(s) 98, 512, 858, 1335
SfaNI GCATC 3 cut(s) 133, 720, 1384
SfcI CTRYAG 3 cut(s) 59, 1260, 1530
SfoI GGCGCC 1 cut(s) 475
SinI GGWCC 1 cut(s) 1279
SmiMI CAYNNNNRTG 2 cut(s) 1055, 1139
SmlI CTYRAG 2 cut(s) 1253, 1400
SmoI CTYRAG 2 cut(s) 1253, 1400
SpeI ACTAGT 1 cut(s) 116
SphI GCATGC 1 cut(s) 202
Sse9I AATT 8 cut(s) 540, 636, 750, 924, 1201, 1501, 1537, 1586
SsiI CCGC 1 cut(s) 150
SspDI GGCGCC 1 cut(s) 473
SspI AATATT 2 cut(s) 896, 1563
SspMI CTAG 1 cut(s) 117
StyD4I CCNGG 2 cut(s) 555, 692
StyI CCWWGG 3 cut(s) 267, 587, 1230
TaaI ACNGT 4 cut(s) 220, 1045, 1077, 1480
TaiI ACGT 1 cut(s) 664
TaqI TCGA 2 cut(s) 941, 1176
TasI AATT 8 cut(s) 540, 636, 750, 924, 1201, 1501, 1537, 1586
TatI WGTACW 3 cut(s) 361, 653, 1310
TauI GCSGC 1 cut(s) 152
TfiI GAWTC 4 cut(s) 25, 370, 808, 955
Tru1I TTAA 7 cut(s) 131, 389, 581, 827, 1008, 1026, 1221
Tru9I TTAA 7 cut(s) 131, 389, 581, 827, 1008, 1026, 1221
TscAI CASTG 8 cut(s) 183, 198, 510, 793, 1141, 1157, 1429, 1597
TseI GCWGC 4 cut(s) 146, 974, 1520, 1532
TspDTI ATGAA 3 cut(s) 500, 821, 924
TspRI CASTG 8 cut(s) 183, 198, 510, 793, 1141, 1157, 1429, 1597
Tth111I GACNNNGTC 1 cut(s) 289
Van91I CCANNNNNTGG 2 cut(s) 926, 1062
VpaK11BI GGWCC 1 cut(s) 1279
XapI RAATTY 2 cut(s) 540, 1586
XceI RCATGY 1 cut(s) 202
XmnI GAANNNNTTC 1 cut(s) 686
XspI CTAG 1 cut(s) 117
ZrmI AGTACT 1 cut(s) 655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.