Rh5DG525900

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000139
Physical Location & Seq
Forward (+)
81353513 .. 81356938
3426 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG525900.1

Sequence Viewer

Length: 1335 bp
ATGTCAGCAGTCAGCTTCTCCCTAAACCCGAAAATGAAGAGGATTCTGAAGTCAACTAAGTCAAGTGCCTTGGGTTCAAGTCAAATAGCTGGTGTTAAGAACCGGAACAAATCATCTTCATCGTCTCAGGTCTTGTCAATGTTGAAGAAGGAGGAGGGCTTCGATCTCCCTGAAGATATTGTAGTGAAAATTCTGTGCCGGTTGCCGGTCAAAACACTGATCCGGTTCACTTGTGTGTCAAAACGGTGGCGTTTTATCATCATTTCCGATCCTCAATTCGCCAAATCCCACCTCCAACTAGCATTACAGCAGGGAACCCTCAGCCAAAGAATCCACCCCATATTTGTTTGGGAGTCCCCTCAATTTCAATCATGGGAACATAGTTTCAAGGGTTCAGTTATACGCCTCAGCTTCCCATCAGAGGAATGTGAGCAGCTAGTAAGGACCACGTGCAATGGCTTGGTTCTTCTAGGTGACTCCTATATAACTGGTTTGGTAGCCTTGTCTATCTGTAATCCATCAACAGGATTTGTCCGCAAAATACCTAGTCCAAGGATGCCTGACTACATGGACGAAAACGGAGAAAGACAGCGTCTAGACTTTGTAATTTCTGGTTTTGGTTATGTCTCGTCCACAGATGACTACAAGCTTGTTTTTGTAATACCGGGCAATAGCACACATTTTCATGTCTATATCTTTTCACTGAGGGCCAACTCTTGGAAAGTTATTGAAGCTCCTCACTTGTCATCACCAGACTGCGGTCACGAGGTGGGGACTCTTTTAAATGAAGCAATCCATTGGATTAACTACCGCCGTGGAGTTTCAGACCCAGCGAGTATGTATGCTTTTGATTTGGCAGAGGAGGAGTTCCGTGAAATGACATTGCCTGTTTGGTTCCAAAAAGATGAGACAGACATAAGGGTTCTTTCATCAGGAGGATGCCTTTGTATGTGGTTAGAGGCAGATGATGGGCTTAGTTGCGAAATTTGGGGAATGACAGAGTATGCGGTGCCTGAATCTTGGGTTAAACTCTTCGGATTTAGAGAAGACGATTTACCAGATGTGTTCACTTCATTAACATGTGGTTGGGATCTGTGTTTTATTACAGAAGGCGGTACAGTTGTGATTGAACTATTTGACAGTAATGAGTTGGTCTGGATTGAATGCCGTAAAGAAGAGAAGCCAGTCTGCAGCGGTCGATATTTGCCTGAAGAGTTGCTCGGGTTTAGGCATAGTTTGCCAAGCGGTCGATATTTGCCTGAAGTGTTGCTCGGGTTGAAGTATAGTTTTTACATGACTTTATATGGTGAAACTTTAGTTTCGGTACCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

444

Amino Acids

50.34

Weight (kDa)

5.45

Isoelectric Point (pI)

55.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 55 - 90 3.9e-10 F-box domain
F-box-like PF12937 55 - 90 1.5e-07 F-box-like
FBA_3 PF08268 113 - 315 4.4e-10 F-box associated beta propeller domain
FBA_1 PF07734 149 - 376 5.7e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1324
AccB1I GGYRCC 2 cut(s) 1009, 1324
AccB7I CCANNNNNTGG 1 cut(s) 717
AciI CCGC 7 cut(s) 535, 759, 811, 1007, 1113, 1194, 1245
AclWI GGATC 3 cut(s) 214, 263, 1098
AcsI RAATTY 2 cut(s) 189, 984
AcuI CTGAAG 4 cut(s) 68, 192, 1230, 1281
AcvI CACGTG 1 cut(s) 450
AdeI CACNNNGTG 1 cut(s) 769
AfaI GTAC 2 cut(s) 1117, 1326
AfiI CCNNNNNNNGG 5 cut(s) 205, 421, 524, 717, 758
AflIII ACRYGT 1 cut(s) 1079
AgsI TTSAA 8 cut(s) 78, 145, 368, 388, 731, 1130, 1163, 1279
AleI CACNNNNGTG 1 cut(s) 233
AluBI AGCT 6 cut(s) 15, 89, 411, 436, 649, 734
AluI AGCT 6 cut(s) 15, 89, 411, 436, 649, 734
Alw26I GTCTC 3 cut(s) 129, 631, 902
AlwI GGATC 3 cut(s) 214, 263, 1098
Ama87I CYCGRG 2 cut(s) 1220, 1271
AoxI GGCC 1 cut(s) 708
ApeKI GCWGC 2 cut(s) 433, 1191
ApoI RAATTY 2 cut(s) 189, 984
Asp718I GGTACC 1 cut(s) 1324
AspS9I GGNCC 2 cut(s) 444, 708
AsuC2I CCSGG 1 cut(s) 666
AsuHPI GGTGA 3 cut(s) 485, 741, 1319
AvaI CYCGRG 2 cut(s) 1220, 1271
AvaII GGWCC 1 cut(s) 444
BaeI ACNNNNGTAYC 2 cut(s) 1107, 1140
BanI GGYRCC 2 cut(s) 1009, 1324
BarI GAAGNNNNNNTAC 2 cut(s) 1038, 1070
BauI CACGAG 1 cut(s) 764
BbrPI CACGTG 1 cut(s) 450
BbsI GAAGAC 1 cut(s) 1053
BbvCI CCTCAGC 2 cut(s) 320, 407
BbvI GCAGC 2 cut(s) 445, 1203
BccI CCATC 3 cut(s) 424, 526, 962
BceAI ACGGC 2 cut(s) 798, 1152
BcnI CCSGG 1 cut(s) 666
BcoDI GTCTC 3 cut(s) 129, 631, 902
BfaI CTAG 5 cut(s) 299, 437, 470, 546, 596
BfmI CTRYAG 1 cut(s) 1189
BisI GCNGC 2 cut(s) 434, 1192
BlsI GCNGC 2 cut(s) 435, 1193
Bme1390I CCNGG 1 cut(s) 666
Bme18I GGWCC 1 cut(s) 444
BmeT110I CYCGRG 2 cut(s) 1220, 1271
BmgT120I GGNCC 2 cut(s) 444, 708
BmiI GGNNCC 4 cut(s) 316, 896, 1011, 1326
BmrFI CCNGG 1 cut(s) 666
BmsI GCATC 2 cut(s) 546, 929
BoxI GACNNNNGTC 1 cut(s) 759
BpiI GAAGAC 1 cut(s) 1053
Bpu10I CCTNAGC 2 cut(s) 320, 407
BpuMI CCSGG 1 cut(s) 666
BsaAI YACGTR 1 cut(s) 450
BsaJI CCNNGG 3 cut(s) 69, 551, 814
BsaWI WCCGGW 2 cut(s) 102, 222
Bsc4I CCNNNNNNNGG 5 cut(s) 205, 421, 524, 717, 758
Bse118I RCCGGY 2 cut(s) 198, 205
Bse1I ACTGG 2 cut(s) 493, 1184
Bse3DI GCAATG 2 cut(s) 460, 881
BseDI CCNNGG 3 cut(s) 69, 551, 814
BseGI GGATG 2 cut(s) 561, 944
BseLI CCNNNNNNNGG 5 cut(s) 205, 421, 524, 717, 758
BseMI GCAATG 2 cut(s) 460, 881
BseMII CTCAG 4 cut(s) 140, 334, 421, 695
BseNI ACTGG 2 cut(s) 493, 1184
BseRI GAGGAG 4 cut(s) 167, 726, 875, 878
BseXI GCAGC 2 cut(s) 445, 1203
BseYI CCCAGC 1 cut(s) 829
Bsh1285I CGRYCG 2 cut(s) 1198, 1249
BshFI GGCC 1 cut(s) 710
BshNI GGYRCC 2 cut(s) 1009, 1324
BsiEI CGRYCG 2 cut(s) 1198, 1249
BsiHKCI CYCGRG 2 cut(s) 1220, 1271
BsiSI CCGG 5 cut(s) 103, 199, 206, 223, 665
BslFI GGGAC 2 cut(s) 340, 787
BslI CCNNNNNNNGG 5 cut(s) 205, 421, 524, 717, 758
BsmAI GTCTC 3 cut(s) 129, 631, 902
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 2 cut(s) 340, 787
BsmI GAATGC 1 cut(s) 1169
BsnI GGCC 1 cut(s) 710
BsoBI CYCGRG 2 cut(s) 1220, 1271
Bsp143I GATC 4 cut(s) 163, 219, 268, 1090
BspACI CCGC 7 cut(s) 535, 759, 811, 1007, 1113, 1194, 1245
BspANI GGCC 1 cut(s) 710
BspCNI CTCAG 4 cut(s) 139, 333, 420, 696
BspLI GGNNCC 4 cut(s) 316, 896, 1011, 1326
BspMAI CTGCAG 1 cut(s) 1193
BspPI GGATC 3 cut(s) 214, 263, 1098
BspT107I GGYRCC 2 cut(s) 1009, 1324
BsrDI GCAATG 2 cut(s) 460, 881
BsrFI RCCGGY 2 cut(s) 198, 205
BsrI ACTGG 2 cut(s) 493, 1184
BssAI RCCGGY 2 cut(s) 198, 205
BssECI CCNNGG 3 cut(s) 69, 551, 814
BssMI GATC 4 cut(s) 163, 219, 268, 1090
BssSI CACGAG 1 cut(s) 764
BssT1I CCWWGG 2 cut(s) 69, 551
Bst2BI CACGAG 1 cut(s) 764
Bst4CI ACNGT 3 cut(s) 246, 1120, 1142
Bst6I CTCTTC 4 cut(s) 32, 1037, 1170, 1206
BstAPI GCANNNNNTGC 1 cut(s) 1237
BstBAI YACGTR 1 cut(s) 450
BstDEI CTNAG 6 cut(s) 57, 126, 320, 407, 704, 974
BstDSI CCRYGG 1 cut(s) 814
BstF5I GGATG 2 cut(s) 561, 944
BstKTI GATC 4 cut(s) 166, 222, 271, 1093
BstMAI GTCTC 3 cut(s) 129, 631, 902
BstMBI GATC 4 cut(s) 163, 219, 268, 1090
BstMCI CGRYCG 2 cut(s) 1198, 1249
BstMWI GCNNNNNNNGC 1 cut(s) 1237
BstNSI RCATGY 1 cut(s) 1083
BstPAI GACNNNNGTC 1 cut(s) 759
BstSCI CCNGG 1 cut(s) 664
BstSFI CTRYAG 1 cut(s) 1189
BstV1I GCAGC 2 cut(s) 445, 1203
BstV2I GAAGAC 1 cut(s) 1053
BstX2I RGATCY 1 cut(s) 1090
BstYI RGATCY 1 cut(s) 1090
BsuRI GGCC 1 cut(s) 710
BtgI CCRYGG 1 cut(s) 814
BtsCI GGATG 2 cut(s) 561, 944
BtsIMutI CAGTG 2 cut(s) 215, 701
Cfr10I RCCGGY 2 cut(s) 198, 205
Cfr13I GGNCC 2 cut(s) 444, 708
CseI GACGC 1 cut(s) 581
Csp6I GTAC 2 cut(s) 1116, 1325
CviAII CATG 5 cut(s) 372, 568, 686, 1080, 1294
CviQI GTAC 2 cut(s) 1116, 1325
DdeI CTNAG 6 cut(s) 57, 126, 320, 407, 704, 974
DpnI GATC 4 cut(s) 165, 221, 270, 1092
DpnII GATC 4 cut(s) 163, 219, 268, 1090
DraI TTTAAA 1 cut(s) 783
DraIII CACNNNGTG 1 cut(s) 769
Eam1104I CTCTTC 4 cut(s) 32, 1037, 1170, 1206
EarI CTCTTC 4 cut(s) 32, 1037, 1170, 1206
Eco130I CCWWGG 2 cut(s) 69, 551
Eco47I GGWCC 1 cut(s) 444
Eco57I CTGAAG 4 cut(s) 68, 192, 1230, 1281
Eco72I CACGTG 1 cut(s) 450
Eco88I CYCGRG 2 cut(s) 1220, 1271
EcoT14I CCWWGG 2 cut(s) 69, 551
ErhI CCWWGG 2 cut(s) 69, 551
Esp3I CGTCTC 1 cut(s) 129
FaeI CATG 5 cut(s) 375, 571, 689, 1083, 1297
FaqI GGGAC 2 cut(s) 340, 787
FatI CATG 5 cut(s) 371, 567, 685, 1079, 1293
Fnu4HI GCNGC 2 cut(s) 434, 1192
FokI GGATG 2 cut(s) 568, 951
Fsp4HI GCNGC 2 cut(s) 434, 1192
FspBI CTAG 5 cut(s) 299, 437, 470, 546, 596
GluI GCNGC 2 cut(s) 434, 1192
GsaI CCCAGC 1 cut(s) 833
HaeIII GGCC 1 cut(s) 710
HapII CCGG 5 cut(s) 103, 199, 206, 223, 665
HgaI GACGC 1 cut(s) 581
Hin1II CATG 5 cut(s) 375, 571, 689, 1083, 1297
HincII GTYRAC 1 cut(s) 54
HindII GTYRAC 1 cut(s) 54
HindIII AAGCTT 1 cut(s) 647
HinfI GANTC 6 cut(s) 43, 330, 353, 476, 775, 1016
HpaII CCGG 5 cut(s) 103, 199, 206, 223, 665
HphI GGTGA 3 cut(s) 485, 741, 1319
Hpy166II GTNNAC 4 cut(s) 54, 228, 633, 1068
Hpy188I TCNGA 5 cut(s) 48, 268, 421, 826, 1037
Hpy188III TCNNGA 4 cut(s) 596, 764, 933, 1156
Hpy8I GTNNAC 4 cut(s) 54, 228, 633, 1068
HpyAV CCTTC 2 cut(s) 142, 1103
HpyCH4III ACNGT 3 cut(s) 246, 1120, 1142
HpyCH4IV ACGT 1 cut(s) 449
HpyCH4V TGCA 2 cut(s) 453, 1191
HpyF10VI GCNNNNNNNGC 1 cut(s) 1237
HpyF3I CTNAG 6 cut(s) 57, 126, 320, 407, 704, 974
HpySE526I ACGT 1 cut(s) 449
Hsp92II CATG 5 cut(s) 375, 571, 689, 1083, 1297
KpnI GGTACC 1 cut(s) 1328
Kzo9I GATC 4 cut(s) 163, 219, 268, 1090
LmnI GCTCC 1 cut(s) 739
Lsp1109I GCAGC 2 cut(s) 445, 1203
LweI GCATC 2 cut(s) 546, 929
MaeI CTAG 5 cut(s) 299, 437, 470, 546, 596
MaeII ACGT 1 cut(s) 449
MaeIII GTNAC 2 cut(s) 473, 761
MalI GATC 4 cut(s) 165, 221, 270, 1092
MboI GATC 4 cut(s) 163, 219, 268, 1090
MboII GAAGA 9 cut(s) 49, 108, 157, 185, 458, 1024, 1058, 1187, 1223
MflI RGATCY 1 cut(s) 1090
MluCI AATT 5 cut(s) 189, 275, 362, 606, 984
MlyI GAGTC 3 cut(s) 362, 470, 769
MmeI TCCRAC 1 cut(s) 319
MseI TTAA 5 cut(s) 96, 782, 804, 1026, 1076
MslI CAYNNNNRTG 3 cut(s) 233, 684, 1078
MspA1I CMGCKG 1 cut(s) 1194
MspI CCGG 5 cut(s) 103, 199, 206, 223, 665
MspR9I CCNGG 1 cut(s) 666
Mva1269I GAATGC 1 cut(s) 1169
MwoI GCNNNNNNNGC 1 cut(s) 1237
NciI CCSGG 1 cut(s) 666
NdeII GATC 4 cut(s) 163, 219, 268, 1090
NlaIII CATG 5 cut(s) 375, 571, 689, 1083, 1297
NlaIV GGNNCC 4 cut(s) 316, 896, 1011, 1326
NmuCI GTSAC 2 cut(s) 473, 761
NspI RCATGY 1 cut(s) 1083
OliI CACNNNNGTG 1 cut(s) 233
PciI ACATGT 1 cut(s) 1079
PctI GAATGC 1 cut(s) 1169
PfeI GAWTC 3 cut(s) 43, 330, 1016
PflFI GACNNNGTC 1 cut(s) 591
PflMI CCANNNNNTGG 1 cut(s) 717
PkrI GCNGC 2 cut(s) 435, 1193
PleI GAGTC 3 cut(s) 361, 470, 769
PmaCI CACGTG 1 cut(s) 450
PmlI CACGTG 1 cut(s) 450
PpsI GAGTC 3 cut(s) 361, 470, 769
Ppu21I YACGTR 1 cut(s) 450
PscI ACATGT 1 cut(s) 1079
PshAI GACNNNNGTC 1 cut(s) 759
PspCI CACGTG 1 cut(s) 450
PspFI CCCAGC 1 cut(s) 829
PspN4I GGNNCC 4 cut(s) 316, 896, 1011, 1326
PspPI GGNCC 2 cut(s) 444, 708
PstI CTGCAG 1 cut(s) 1193
PsuI RGATCY 1 cut(s) 1090
PsyI GACNNNGTC 1 cut(s) 591
RsaI GTAC 2 cut(s) 1117, 1326
RsaNI GTAC 2 cut(s) 1116, 1325
RseI CAYNNNNRTG 3 cut(s) 233, 684, 1078
SaqAI TTAA 5 cut(s) 96, 782, 804, 1026, 1076
SatI GCNGC 2 cut(s) 434, 1192
Sau3AI GATC 4 cut(s) 163, 219, 268, 1090
Sau96I GGNCC 2 cut(s) 444, 708
SchI GAGTC 3 cut(s) 362, 470, 769
ScrFI CCNGG 1 cut(s) 666
SfaNI GCATC 2 cut(s) 546, 929
SfcI CTRYAG 1 cut(s) 1189
SinI GGWCC 1 cut(s) 444
SmiMI CAYNNNNRTG 3 cut(s) 233, 684, 1078
Sse9I AATT 5 cut(s) 189, 275, 362, 606, 984
SsiI CCGC 7 cut(s) 535, 759, 811, 1007, 1113, 1194, 1245
SspMI CTAG 5 cut(s) 299, 437, 470, 546, 596
StyD4I CCNGG 1 cut(s) 664
StyI CCWWGG 2 cut(s) 69, 551
TaaI ACNGT 3 cut(s) 246, 1120, 1142
TaiI ACGT 1 cut(s) 452
TaqI TCGA 3 cut(s) 162, 1198, 1249
TasI AATT 5 cut(s) 189, 275, 362, 606, 984
TfiI GAWTC 3 cut(s) 43, 330, 1016
Tru1I TTAA 5 cut(s) 96, 782, 804, 1026, 1076
Tru9I TTAA 5 cut(s) 96, 782, 804, 1026, 1076
TscAI CASTG 2 cut(s) 222, 708
TseFI GTSAC 2 cut(s) 473, 761
TseI GCWGC 2 cut(s) 433, 1191
Tsp45I GTSAC 2 cut(s) 473, 761
TspDTI ATGAA 6 cut(s) 50, 108, 674, 801, 918, 1062
TspGWI ACGGA 2 cut(s) 594, 860
TspRI CASTG 2 cut(s) 222, 708
Tth111I GACNNNGTC 1 cut(s) 591
Van91I CCANNNNNTGG 1 cut(s) 717
VpaK11BI GGWCC 1 cut(s) 444
XapI RAATTY 2 cut(s) 189, 984
XbaI TCTAGA 1 cut(s) 595
XceI RCATGY 1 cut(s) 1083
XspI CTAG 5 cut(s) 299, 437, 470, 546, 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.