RchiOBHm_Chr5g0076091

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000139
Physical Location & Seq
Reverse (-)
81802701 .. 81803927
1227 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35078

Sequence Viewer

Length: 1227 bp
ATGTCGAGCTGCTTCGATCTCCCCGAAGATATTGTAGTCAAGATTCTGTGCCGGTTGCCGGTCAAATCTTTGATCCGGTTCACTTGTGTCTCGAAGCGGTGGTGTTCTATCACTTCTATGATCATTTCTGATCCTAAATTTGGAAAATCTCACTTCCAACTTGCTTCTCAGCAGAGAGCTCTCCGTAGAAAAGTCCTCCTCACCTCCTACCCTACAGTCAGAGAGCCAGGTCCGAGGCCCAATGCTTGTTACGATCCCAATTCGAAGTTACCCCCTCGATTTCAATCTTTAGAGGATAAGTATTTAGTCAAGAATTTCACATTCCCATCCAAGAAGAATGCTTATACGGAAGAAATGGGCTCCTGCAATGGTTTGGTACTTGTAGGCAATCCTTGTTTCGGTGGCTACGAAAACTTGTCTATCTGGAACCTATCCACTGGATTCTTCCGCAAGATACCCAGTCCAAGTGTCCGCGAGAAGCTAATAAAATCAGCAACAGATCAAGCGTACCGGTACTTCATAAATTTTGGTTTTGGTCATGAGTTGGCCAGTGACGACTACAAACTTGTTTTCATATTATGCGCCCTCGGTCAGCTGGTGGAAGTCCATATCTTCTCTATGAGAGCTAACATTTGGAAAGCTATTACAGCTCCTCACTTGTCAAGAGCGGACTGGGACAGTGGACAGGGCACTTTTTCAAATGGAGCAATTCACAGGGTCGTTCACTGCAGAAGTGAGAGTTCTGACCCAGTTATCTATGCTTTTGACTTGGCAGAGGAGGAGTTTCGGCAAGTGCCATTGCCGCCTGTTTTGTGGCAAAATGAAGAAGACAGGAATCCGACCGAGATAACAACTCTGGTTCATTTAGGTGGATACCTCTGCATATGGTCTCGGAAGCGTTATAATCCCGACAAAGGTGAAGTTTGGGCGATGACAGAGTATGGGGTGCCTGAATCTTGGGTTAAACTCTTTAATTTTAGAGTACCAGATTTACCAGATGTCTTTGCTTCATTATACAGTACATGGGATCTGTGTTTCATTACAGAAAGCGGTACAATGGTGATAAGCCTGAGTAAGGAGTTGTTTTGGATTGAATGCCATAATGATGAAAAGCCGATCTGCAGCGGACGGTATAGGCTTGAGGAGGTTCACCCTGAGGTGCCGGGGTGTGTATTTCATTTTCATGCGACCGCTTATGATGAAACTTTACTTTCTGTAGCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

408

Amino Acids

46.66

Weight (kDa)

6.43

Isoelectric Point (pI)

45.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 39 2.1e-09 F-box domain
F-box-like PF12937 6 - 39 2.6e-07 F-box-like
FBA_3 PF08268 99 - 356 7.5e-14 F-box associated beta propeller domain
FBA_1 PF07734 110 - 359 7.1e-14 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 903
AccB1I GGYRCC 2 cut(s) 946, 1159
AccBSI CCGCTC 1 cut(s) 668
AccII CGCG 1 cut(s) 474
AciI CCGC 8 cut(s) 97, 448, 472, 668, 803, 1050, 1125, 1191
AclWI GGATC 4 cut(s) 67, 125, 248, 1035
AcoI YGGCCR 1 cut(s) 546
AcsI RAATTY 3 cut(s) 137, 313, 523
AfaI GTAC 6 cut(s) 378, 509, 515, 984, 1021, 1054
AfiI CCNNNNNNNGG 5 cut(s) 58, 140, 398, 914, 1075
AgeI ACCGGT 1 cut(s) 510
AgsI TTSAA 3 cut(s) 284, 699, 1094
AjnI CCWGG 1 cut(s) 226
AluBI AGCT 8 cut(s) 9, 179, 481, 595, 626, 641, 650, 1220
AluI AGCT 8 cut(s) 9, 179, 481, 595, 626, 641, 650, 1220
Alw21I GWGCWC 1 cut(s) 181
Alw26I GTCTC 2 cut(s) 94, 894
AlwI GGATC 4 cut(s) 67, 125, 248, 1035
AoxI GGCC 2 cut(s) 236, 546
ApeKI GCWGC 2 cut(s) 9, 1122
ApoI RAATTY 3 cut(s) 137, 313, 523
AsiGI ACCGGT 1 cut(s) 510
AspLEI GCGC 1 cut(s) 584
AspS9I GGNCC 2 cut(s) 230, 237
AsuC2I CCSGG 1 cut(s) 1164
AsuHPI GGTGA 4 cut(s) 193, 929, 1072, 1142
AsuII TTCGAA 1 cut(s) 263
AvaII GGWCC 1 cut(s) 230
AxyI CCTNAGG 1 cut(s) 1155
BaeGI GKGCMC 1 cut(s) 692
BaeI ACNNNNGTAYC 2 cut(s) 1044, 1077
BalI TGGCCA 1 cut(s) 548
BanI GGYRCC 2 cut(s) 946, 1159
BanII GRGCYC 2 cut(s) 181, 362
BarI GAAGNNNNNNTAC 2 cut(s) 500, 532
BbsI GAAGAC 1 cut(s) 834
Bbv12I GWGCWC 1 cut(s) 181
BbvI GCAGC 1 cut(s) 1134
BccI CCATC 1 cut(s) 334
BciT130I CCWGG 1 cut(s) 228
BciVI GTATCC 1 cut(s) 866
BclI TGATCA 1 cut(s) 120
BcnI CCSGG 1 cut(s) 1164
BcoDI GTCTC 2 cut(s) 94, 894
BfmI CTRYAG 4 cut(s) 213, 727, 1120, 1215
BfuI GTATCC 1 cut(s) 866
BisI GCNGC 3 cut(s) 10, 803, 1123
BlsI GCNGC 3 cut(s) 11, 804, 1124
Bme1390I CCNGG 2 cut(s) 228, 1164
Bme18I GGWCC 1 cut(s) 230
BmgT120I GGNCC 2 cut(s) 230, 237
BmiI GGNNCC 4 cut(s) 361, 428, 948, 1161
BmrFI CCNGG 2 cut(s) 228, 1164
BmrI ACTGGG 3 cut(s) 453, 682, 743
BmuI ACTGGG 3 cut(s) 453, 682, 743
BpiI GAAGAC 1 cut(s) 834
Bpu14I TTCGAA 1 cut(s) 263
BpuEI CTTGAG 1 cut(s) 1160
BpuMI CCSGG 1 cut(s) 1164
BsaBI GATNNNNATC 1 cut(s) 283
BsaI GGTCTC 1 cut(s) 894
BsaJI CCNNGG 3 cut(s) 233, 586, 1163
BsaWI WCCGGW 2 cut(s) 75, 510
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 140, 398, 914, 1075
Bse118I RCCGGY 3 cut(s) 51, 58, 510
Bse1I ACTGG 5 cut(s) 442, 459, 549, 677, 749
Bse21I CCTNAGG 1 cut(s) 1155
Bse3DI GCAATG 2 cut(s) 373, 797
Bse8I GATNNNNATC 1 cut(s) 283
BseBI CCWGG 1 cut(s) 228
BseDI CCNNGG 3 cut(s) 233, 586, 1163
BseGI GGATG 1 cut(s) 326
BseJI GATNNNNATC 1 cut(s) 283
BseLI CCNNNNNNNGG 5 cut(s) 58, 140, 398, 914, 1075
BseMI GCAATG 2 cut(s) 373, 797
BseMII CTCAG 3 cut(s) 182, 1061, 1146
BseNI ACTGG 5 cut(s) 442, 459, 549, 677, 749
BseRI GAGGAG 5 cut(s) 188, 642, 791, 794, 1157
BseSI GKGCMC 1 cut(s) 692
BseXI GCAGC 1 cut(s) 1134
Bsh1236I CGCG 1 cut(s) 474
Bsh1285I CGRYCG 2 cut(s) 843, 1191
BshFI GGCC 2 cut(s) 238, 548
BshNI GGYRCC 2 cut(s) 946, 1159
BshTI ACCGGT 1 cut(s) 510
BsiEI CGRYCG 2 cut(s) 843, 1191
BsiHKAI GWGCWC 1 cut(s) 181
BsiSI CCGG 5 cut(s) 52, 59, 76, 511, 1163
BslFI GGGAC 1 cut(s) 689
BslI CCNNNNNNNGG 5 cut(s) 58, 140, 398, 914, 1075
BsmAI GTCTC 2 cut(s) 94, 894
BsmFI GGGAC 1 cut(s) 689
BsmI GAATGC 2 cut(s) 343, 1100
BsnI GGCC 2 cut(s) 238, 548
Bso31I GGTCTC 1 cut(s) 894
Bsp119I TTCGAA 1 cut(s) 263
Bsp1286I GDGCHC 3 cut(s) 181, 362, 692
Bsp143I GATC 8 cut(s) 16, 72, 120, 130, 253, 499, 1027, 1116
BspACI CCGC 8 cut(s) 97, 448, 472, 668, 803, 1050, 1125, 1191
BspANI GGCC 2 cut(s) 238, 548
BspCNI CTCAG 3 cut(s) 181, 1062, 1147
BspFNI CGCG 1 cut(s) 474
BspHI TCATGA 1 cut(s) 538
BspLI GGNNCC 4 cut(s) 361, 428, 948, 1161
BspMAI CTGCAG 2 cut(s) 731, 1124
BspPI GGATC 4 cut(s) 67, 125, 248, 1035
BspT104I TTCGAA 1 cut(s) 263
BspT107I GGYRCC 2 cut(s) 946, 1159
BspTNI GGTCTC 1 cut(s) 894
BsrBI CCGCTC 1 cut(s) 668
BsrDI GCAATG 2 cut(s) 373, 797
BsrFI RCCGGY 3 cut(s) 51, 58, 510
BsrI ACTGG 5 cut(s) 442, 459, 549, 677, 749
BssAI RCCGGY 3 cut(s) 51, 58, 510
BssECI CCNNGG 3 cut(s) 233, 586, 1163
BssMI GATC 8 cut(s) 16, 72, 120, 130, 253, 499, 1027, 1116
Bst2UI CCWGG 1 cut(s) 228
Bst4CI ACNGT 4 cut(s) 217, 680, 1019, 1131
BstBI TTCGAA 1 cut(s) 263
BstDEI CTNAG 3 cut(s) 168, 1070, 1155
BstENI CCTNNNNNAGG 1 cut(s) 1073
BstF5I GGATG 1 cut(s) 326
BstFNI CGCG 1 cut(s) 474
BstHHI GCGC 1 cut(s) 584
BstKTI GATC 8 cut(s) 19, 75, 123, 133, 256, 502, 1030, 1119
BstMAI GTCTC 2 cut(s) 94, 894
BstMBI GATC 8 cut(s) 16, 72, 120, 130, 253, 499, 1027, 1116
BstMCI CGRYCG 2 cut(s) 843, 1191
BstMWI GCNNNNNNNGC 2 cut(s) 647, 802
BstNI CCWGG 1 cut(s) 228
BstSCI CCNGG 2 cut(s) 226, 1162
BstSFI CTRYAG 4 cut(s) 213, 727, 1120, 1215
BstSLI GKGCMC 1 cut(s) 692
BstUI CGCG 1 cut(s) 474
BstV1I GCAGC 1 cut(s) 1134
BstV2I GAAGAC 1 cut(s) 834
BstX2I RGATCY 1 cut(s) 1027
BstYI RGATCY 1 cut(s) 1027
Bsu36I CCTNAGG 1 cut(s) 1155
BsuI GTATCC 1 cut(s) 866
BsuRI GGCC 2 cut(s) 238, 548
BtgZI GCGATG 1 cut(s) 944
BtsCI GGATG 1 cut(s) 326
BtsI GCAGTG 1 cut(s) 724
BtsIMutI CAGTG 4 cut(s) 435, 556, 685, 724
CciI TCATGA 1 cut(s) 538
CfoI GCGC 1 cut(s) 584
Cfr10I RCCGGY 3 cut(s) 51, 58, 510
Cfr13I GGNCC 2 cut(s) 230, 237
Csp6I GTAC 6 cut(s) 377, 508, 514, 983, 1020, 1053
CspAI ACCGGT 1 cut(s) 510
CviAII CATG 3 cut(s) 539, 1023, 1184
CviQI GTAC 6 cut(s) 377, 508, 514, 983, 1020, 1053
DdeI CTNAG 3 cut(s) 168, 1070, 1155
DpnI GATC 8 cut(s) 18, 74, 122, 132, 255, 501, 1029, 1118
DpnII GATC 8 cut(s) 16, 72, 120, 130, 253, 499, 1027, 1116
EaeI YGGCCR 1 cut(s) 546
Ecl136II GAGCTC 1 cut(s) 179
Eco24I GRGCYC 2 cut(s) 181, 362
Eco31I GGTCTC 1 cut(s) 894
Eco47I GGWCC 1 cut(s) 230
Eco53kI GAGCTC 1 cut(s) 179
Eco81I CCTNAGG 1 cut(s) 1155
EcoICRI GAGCTC 1 cut(s) 179
EcoNI CCTNNNNNAGG 1 cut(s) 1073
EcoRII CCWGG 1 cut(s) 226
EcoT38I GRGCYC 2 cut(s) 181, 362
FaeI CATG 3 cut(s) 542, 1026, 1187
FaqI GGGAC 1 cut(s) 689
FatI CATG 3 cut(s) 538, 1022, 1183
FauNDI CATATG 1 cut(s) 884
FbaI TGATCA 1 cut(s) 120
Fnu4HI GCNGC 3 cut(s) 10, 803, 1123
FokI GGATG 1 cut(s) 313
FriOI GRGCYC 2 cut(s) 181, 362
Fsp4HI GCNGC 3 cut(s) 10, 803, 1123
GlaI GCGC 1 cut(s) 583
GluI GCNGC 3 cut(s) 10, 803, 1123
HaeIII GGCC 2 cut(s) 238, 548
HapII CCGG 5 cut(s) 52, 59, 76, 511, 1163
HhaI GCGC 1 cut(s) 584
Hin1II CATG 3 cut(s) 542, 1026, 1187
Hin6I GCGC 1 cut(s) 582
HinP1I GCGC 1 cut(s) 582
HinfI GANTC 4 cut(s) 43, 441, 835, 953
HpaII CCGG 5 cut(s) 52, 59, 76, 511, 1163
HphI GGTGA 4 cut(s) 193, 929, 1072, 1142
Hpy166II GTNNAC 4 cut(s) 81, 683, 724, 1150
Hpy188I TCNGA 6 cut(s) 130, 221, 234, 745, 840, 894
Hpy188III TCNNGA 7 cut(s) 40, 91, 310, 424, 539, 663, 908
Hpy8I GTNNAC 4 cut(s) 81, 683, 724, 1150
HpyCH4III ACNGT 4 cut(s) 217, 680, 1019, 1131
HpyCH4V TGCA 4 cut(s) 366, 729, 882, 1122
HpyF10VI GCNNNNNNNGC 2 cut(s) 647, 802
HpyF3I CTNAG 3 cut(s) 168, 1070, 1155
Hsp92II CATG 3 cut(s) 542, 1026, 1187
HspAI GCGC 1 cut(s) 582
Ksp22I TGATCA 1 cut(s) 120
Kzo9I GATC 8 cut(s) 16, 72, 120, 130, 253, 499, 1027, 1116
LmnI GCTCC 3 cut(s) 365, 655, 704
Lsp1109I GCAGC 1 cut(s) 1134
MaeIII GTNAC 3 cut(s) 248, 267, 551
MalI GATC 8 cut(s) 18, 74, 122, 132, 255, 501, 1029, 1118
MbiI CCGCTC 1 cut(s) 668
MboI GATC 8 cut(s) 16, 72, 120, 130, 253, 499, 1027, 1116
MboII GAAGA 7 cut(s) 38, 346, 362, 436, 604, 836, 839
MflI RGATCY 1 cut(s) 1027
MhlI GDGCHC 3 cut(s) 181, 362, 692
MlsI TGGCCA 1 cut(s) 548
MluCI AATT 6 cut(s) 137, 259, 313, 523, 708, 973
MluNI TGGCCA 1 cut(s) 548
MmeI TCCRAC 2 cut(s) 181, 863
Mox20I TGGCCA 1 cut(s) 548
MscI TGGCCA 1 cut(s) 548
MseI TTAA 2 cut(s) 963, 972
MslI CAYNNNNRTG 4 cut(s) 116, 867, 1104, 1182
Msp20I TGGCCA 1 cut(s) 548
MspA1I CMGCKG 2 cut(s) 595, 1125
MspI CCGG 5 cut(s) 52, 59, 76, 511, 1163
MspR9I CCNGG 2 cut(s) 228, 1164
Mva1269I GAATGC 2 cut(s) 343, 1100
MvaI CCWGG 1 cut(s) 228
MvnI CGCG 1 cut(s) 474
MwoI GCNNNNNNNGC 2 cut(s) 647, 802
NciI CCSGG 1 cut(s) 1164
NdeI CATATG 1 cut(s) 884
NdeII GATC 8 cut(s) 16, 72, 120, 130, 253, 499, 1027, 1116
NlaIII CATG 3 cut(s) 542, 1026, 1187
NlaIV GGNNCC 4 cut(s) 361, 428, 948, 1161
NmuCI GTSAC 1 cut(s) 551
NspV TTCGAA 1 cut(s) 263
PagI TCATGA 1 cut(s) 538
PcsI WCGNNNNNNNCGW 2 cut(s) 21, 405
PctI GAATGC 2 cut(s) 343, 1100
PfeI GAWTC 4 cut(s) 43, 441, 835, 953
PinAI ACCGGT 1 cut(s) 510
PkrI GCNGC 3 cut(s) 11, 804, 1124
PsiI TTATAA 1 cut(s) 903
Psp124BI GAGCTC 1 cut(s) 181
Psp6I CCWGG 1 cut(s) 226
PspGI CCWGG 1 cut(s) 226
PspN4I GGNNCC 4 cut(s) 361, 428, 948, 1161
PspPI GGNCC 2 cut(s) 230, 237
PstI CTGCAG 2 cut(s) 731, 1124
PsuI RGATCY 1 cut(s) 1027
PvuII CAGCTG 1 cut(s) 595
RsaI GTAC 6 cut(s) 378, 509, 515, 984, 1021, 1054
RsaNI GTAC 6 cut(s) 377, 508, 514, 983, 1020, 1053
RseI CAYNNNNRTG 4 cut(s) 116, 867, 1104, 1182
SacI GAGCTC 1 cut(s) 181
SaqAI TTAA 2 cut(s) 963, 972
SatI GCNGC 3 cut(s) 10, 803, 1123
Sau3AI GATC 8 cut(s) 16, 72, 120, 130, 253, 499, 1027, 1116
Sau96I GGNCC 2 cut(s) 230, 237
ScrFI CCNGG 2 cut(s) 228, 1164
SduI GDGCHC 3 cut(s) 181, 362, 692
SfcI CTRYAG 4 cut(s) 213, 727, 1120, 1215
SfuI TTCGAA 1 cut(s) 263
SinI GGWCC 1 cut(s) 230
SmiMI CAYNNNNRTG 4 cut(s) 116, 867, 1104, 1182
SmlI CTYRAG 1 cut(s) 1139
SmoI CTYRAG 1 cut(s) 1139
Sse9I AATT 6 cut(s) 137, 259, 313, 523, 708, 973
SsiI CCGC 8 cut(s) 97, 448, 472, 668, 803, 1050, 1125, 1191
SstI GAGCTC 1 cut(s) 181
StyD4I CCNGG 2 cut(s) 226, 1162
TaaI ACNGT 4 cut(s) 217, 680, 1019, 1131
TaqI TCGA 5 cut(s) 5, 15, 92, 263, 277
TaqII GACCGA 2 cut(s) 578, 857
TasI AATT 6 cut(s) 137, 259, 313, 523, 708, 973
TatI WGTACW 1 cut(s) 1019
TauI GCSGC 1 cut(s) 805
TfiI GAWTC 4 cut(s) 43, 441, 835, 953
Tru1I TTAA 2 cut(s) 963, 972
Tru9I TTAA 2 cut(s) 963, 972
TscAI CASTG 4 cut(s) 442, 556, 685, 731
TseFI GTSAC 1 cut(s) 551
TseI GCWGC 2 cut(s) 9, 1122
Tsp45I GTSAC 1 cut(s) 551
TspGWI ACGGA 2 cut(s) 173, 362
TspRI CASTG 4 cut(s) 442, 556, 685, 731
VpaK11BI GGWCC 1 cut(s) 230
XagI CCTNNNNNAGG 1 cut(s) 1073
XapI RAATTY 3 cut(s) 137, 313, 523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.