Rroxscaffold_3G00232830

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000139
Physical Location & Seq
Reverse (-)
18565906 .. 18567150
1245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00232830.1

Sequence Viewer

Length: 1245 bp
ATGTTGACGAAGGAGGAGCAGCTTGATGTCCACCTCCCTGAACATGTTGTACTCAACATTCTCTGCCGGTTGCCCCTCAAGTCCTTGATCCGCTTCACTTGTGTCTGTAAACGCTGGCGTTCTCTTATCATTTCTGACCCCCAATTTGCCAACTCCCATTTCCGACTAGCAGCATCTCAGCTCCGTCGAAATGTCCTCATCTCCACCCACCCTATCTTCATTTCAAAAGGTACACTCGGAACAACCCATACCATGTTACCCTCTCGATTTCACTCCTTAGACGATAACTTTTCGGTCAGAAGTCTCACCTTCCCATCCGAGCCGAATCGCGACATTGTAGTAATGGGCTCCTGCAATGGTTTGGTAGTTTTAGGCAAGTTCTATCGCCATGCTTTGGTACCTCTAGGCCAATTATATTGTGATTATTATAAAACTTTGGGAATCTGGAACCCATCCACTGGATTCTTCCGCGACATACCTAGTCCATGTTTTCAGATTGGGATGATAAAATTGACAGATGAAAAGAAAGAAAGGCACATGAGCTGTGTATATTATGGTTTTGGTCTAGTGTCGGCCTCCGGTGACTACAAATTTGTAGTGATACCAAACTTTGGTGGTTTTATTGAAGTACAGGTGTTCTCAGTCAGAGCCAACTGTTGGAAAGTTGTTAAAGCTCCTTACTTGTCGCCATACCGCCTCTGGTCTAAACAATGGGGGACTTATTCAAATGGAGCAGTTCATTGGGTCAGTCATCGCGAGCCTAGGATTTTCGAGCCATCCGTCTATGCTTTTGATCTGGCAAATGAGGAGTTTCGGGAAATGCCATTGCCTGTTCTTAGCCACAATGAAGATTACATGAAAATGACGCAAGTAAGAACTCCGGTTCTTGTAGGAGGATGTCTGTGTGTGATGTTTCAGGATTTTGATGAGTGTAGTGAATTTTGGGCGATGAAAGAGTATGGAGTGCCTGCATCTTGGGTTAAACTCTTTCGGTTTAATGTACGTGATCTACCAGATGTGTTTGCTCCATTCCTTAGCTGCTATTACTGGGATCCTATTTTCATTGCAGAAGACGGTACAGTTGTGATCAAATTGCATAAGAAGGAGGAGTTGGTCAGGATTAAATGCCATAAAGAAGAGAAGCCAGTCTGCACCAAACGGTACGGTCTTGAGGAGGTGCCGGGATGTAAGTGTTTATTTGATGCTAGTTTGTATGATGAAACTCTTGTTTCAGTACCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

414

Amino Acids

47.77

Weight (kDa)

8.08

Isoelectric Point (pI)

50.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 11 - 46 4.8e-11 F-box domain
F-box-like PF12937 11 - 46 1.2e-08 F-box-like
FBA_3 PF08268 114 - 288 5e-08 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 429
Acc65I GGTACC 1 cut(s) 397
AccB1I GGYRCC 2 cut(s) 397, 1177
AccB7I CCANNNNNTGG 4 cut(s) 394, 458, 611, 657
AccII CGCG 3 cut(s) 330, 471, 756
AciI CCGC 3 cut(s) 91, 469, 694
AclWI GGATC 3 cut(s) 82, 1046, 1059
AcsI RAATTY 2 cut(s) 590, 938
AfaI GTAC 8 cut(s) 51, 232, 399, 630, 1002, 1078, 1163, 1236
AfiI CCNNNNNNNGG 4 cut(s) 394, 458, 611, 657
AflIII ACRYGT 1 cut(s) 43
AgsI TTSAA 3 cut(s) 225, 626, 726
AjuI GAANNNNNNNTTGG 4 cut(s) 143, 175, 1094, 1126
AluBI AGCT 5 cut(s) 22, 181, 543, 674, 1038
AluI AGCT 5 cut(s) 22, 181, 543, 674, 1038
Alw26I GTCTC 1 cut(s) 308
AlwI GGATC 3 cut(s) 82, 1046, 1059
AlwNI CAGNNNCTG 1 cut(s) 1238
AoxI GGCC 2 cut(s) 406, 573
ApeKI GCWGC 3 cut(s) 19, 170, 1038
ApoI RAATTY 2 cut(s) 590, 938
ArsI GACNNNNNNTTYG 4 cut(s) 128, 160, 575, 607
Asp718I GGTACC 1 cut(s) 397
AspA2I CCTAGG 1 cut(s) 761
AsuC2I CCSGG 1 cut(s) 1182
AsuHPI GGTGA 2 cut(s) 298, 593
AvrII CCTAGG 1 cut(s) 761
BaeI ACNNNNGTAYC 2 cut(s) 1068, 1101
BamHI GGATCC 1 cut(s) 1051
BanI GGYRCC 2 cut(s) 397, 1177
BanII GRGCYC 1 cut(s) 350
BbsI GAAGAC 1 cut(s) 1077
BbvI GCAGC 3 cut(s) 31, 182, 1025
BccI CCATC 3 cut(s) 322, 460, 784
BclI TGATCA 1 cut(s) 1086
BcnI CCSGG 1 cut(s) 1182
BcoDI GTCTC 1 cut(s) 308
BfaI CTAG 6 cut(s) 167, 404, 480, 566, 762, 1206
BisI GCNGC 3 cut(s) 20, 171, 1039
BlnI CCTAGG 1 cut(s) 761
BlsI GCNGC 3 cut(s) 21, 172, 1040
Bme1390I CCNGG 1 cut(s) 1182
BmiI GGNNCC 5 cut(s) 349, 399, 449, 1053, 1179
BmrFI CCNGG 1 cut(s) 1182
BmrI ACTGGG 1 cut(s) 1057
BmsI GCATC 3 cut(s) 182, 980, 1192
BmuI ACTGGG 1 cut(s) 1057
BpiI GAAGAC 1 cut(s) 1077
Bpu10I CCTNAGC 1 cut(s) 1034
BpuEI CTTGAG 2 cut(s) 62, 1190
BpuMI CCSGG 1 cut(s) 1182
BsaAI YACGTR 1 cut(s) 1004
BsaJI CCNNGG 1 cut(s) 761
BsaWI WCCGGW 2 cut(s) 578, 880
Bsc4I CCNNNNNNNGG 4 cut(s) 394, 458, 611, 657
Bse118I RCCGGY 1 cut(s) 66
Bse1I ACTGG 3 cut(s) 463, 1052, 1145
Bse3DI GCAATG 3 cut(s) 361, 824, 1062
BseDI CCNNGG 1 cut(s) 761
BseGI GGATG 6 cut(s) 314, 452, 507, 776, 902, 1190
BseLI CCNNNNNNNGG 4 cut(s) 394, 458, 611, 657
BseMI GCAATG 3 cut(s) 361, 824, 1062
BseMII CTCAG 2 cut(s) 191, 654
BseNI ACTGG 3 cut(s) 463, 1052, 1145
BseRI GAGGAG 4 cut(s) 29, 821, 1121, 1187
BseXI GCAGC 3 cut(s) 31, 182, 1025
BsgI GTGCAG 1 cut(s) 1135
Bsh1236I CGCG 3 cut(s) 330, 471, 756
BshFI GGCC 2 cut(s) 408, 575
BshNI GGYRCC 2 cut(s) 397, 1177
BsiSI CCGG 4 cut(s) 67, 579, 881, 1181
BslFI GGGAC 1 cut(s) 730
BslI CCNNNNNNNGG 4 cut(s) 394, 458, 611, 657
BsmAI GTCTC 1 cut(s) 308
BsmFI GGGAC 1 cut(s) 730
BsnI GGCC 2 cut(s) 408, 575
Bsp1286I GDGCHC 1 cut(s) 350
Bsp143I GATC 5 cut(s) 87, 793, 1006, 1051, 1086
Bsp68I TCGCGA 2 cut(s) 330, 756
BspACI CCGC 3 cut(s) 91, 469, 694
BspANI GGCC 2 cut(s) 408, 575
BspCNI CTCAG 2 cut(s) 190, 653
BspFNI CGCG 3 cut(s) 330, 471, 756
BspLI GGNNCC 5 cut(s) 349, 399, 449, 1053, 1179
BspPI GGATC 3 cut(s) 82, 1046, 1059
BspT107I GGYRCC 2 cut(s) 397, 1177
BsrDI GCAATG 3 cut(s) 361, 824, 1062
BsrFI RCCGGY 1 cut(s) 66
BsrI ACTGG 3 cut(s) 463, 1052, 1145
BssAI RCCGGY 1 cut(s) 66
BssECI CCNNGG 1 cut(s) 761
BssMI GATC 5 cut(s) 87, 793, 1006, 1051, 1086
BssT1I CCWWGG 1 cut(s) 761
Bst4CI ACNGT 5 cut(s) 656, 1076, 1081, 1161, 1166
Bst6I CTCTTC 1 cut(s) 1131
BstBAI YACGTR 1 cut(s) 1004
BstC8I GCNNGC 3 cut(s) 116, 758, 969
BstDEI CTNAG 5 cut(s) 177, 277, 640, 836, 1034
BstF5I GGATG 6 cut(s) 314, 452, 507, 776, 902, 1190
BstFNI CGCG 3 cut(s) 330, 471, 756
BstKTI GATC 5 cut(s) 90, 796, 1009, 1054, 1089
BstMAI GTCTC 1 cut(s) 308
BstMBI GATC 5 cut(s) 87, 793, 1006, 1051, 1086
BstNSI RCATGY 1 cut(s) 47
BstSCI CCNGG 1 cut(s) 1180
BstUI CGCG 3 cut(s) 330, 471, 756
BstV1I GCAGC 3 cut(s) 31, 182, 1025
BstV2I GAAGAC 1 cut(s) 1077
BstX2I RGATCY 1 cut(s) 1051
BstYI RGATCY 1 cut(s) 1051
BsuRI GGCC 2 cut(s) 408, 575
BtgZI GCGATG 2 cut(s) 737, 962
BtsCI GGATG 6 cut(s) 314, 452, 507, 776, 902, 1190
BtsIMutI CAGTG 1 cut(s) 456
BtuMI TCGCGA 2 cut(s) 330, 756
Cac8I GCNNGC 3 cut(s) 116, 758, 969
CaiI CAGNNNCTG 1 cut(s) 1238
Cfr10I RCCGGY 1 cut(s) 66
CseI GACGC 1 cut(s) 874
Csp6I GTAC 8 cut(s) 50, 231, 398, 629, 1001, 1077, 1162, 1235
CviAII CATG 6 cut(s) 44, 253, 389, 486, 538, 856
CviQI GTAC 8 cut(s) 50, 231, 398, 629, 1001, 1077, 1162, 1235
DdeI CTNAG 5 cut(s) 177, 277, 640, 836, 1034
DpnI GATC 5 cut(s) 89, 795, 1008, 1053, 1088
DpnII GATC 5 cut(s) 87, 793, 1006, 1051, 1086
Eam1104I CTCTTC 1 cut(s) 1131
EarI CTCTTC 1 cut(s) 1131
Eco130I CCWWGG 1 cut(s) 761
Eco24I GRGCYC 1 cut(s) 350
EcoT14I CCWWGG 1 cut(s) 761
EcoT38I GRGCYC 1 cut(s) 350
ErhI CCWWGG 1 cut(s) 761
FaeI CATG 6 cut(s) 47, 256, 392, 489, 541, 859
FaqI GGGAC 1 cut(s) 730
FatI CATG 6 cut(s) 43, 252, 388, 485, 537, 855
FbaI TGATCA 1 cut(s) 1086
Fnu4HI GCNGC 3 cut(s) 20, 171, 1039
FokI GGATG 6 cut(s) 301, 439, 514, 763, 909, 1197
FriOI GRGCYC 1 cut(s) 350
Fsp4HI GCNGC 3 cut(s) 20, 171, 1039
FspBI CTAG 6 cut(s) 167, 404, 480, 566, 762, 1206
GluI GCNGC 3 cut(s) 20, 171, 1039
HaeIII GGCC 2 cut(s) 408, 575
HapII CCGG 4 cut(s) 67, 579, 881, 1181
HgaI GACGC 1 cut(s) 874
Hin1II CATG 6 cut(s) 47, 256, 392, 489, 541, 859
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 3 cut(s) 325, 441, 462
HpaII CCGG 4 cut(s) 67, 579, 881, 1181
HphI GGTGA 2 cut(s) 298, 593
Hpy166II GTNNAC 4 cut(s) 6, 31, 110, 233
Hpy188I TCNGA 7 cut(s) 136, 164, 239, 299, 319, 495, 647
Hpy188III TCNNGA 8 cut(s) 264, 329, 445, 755, 815, 917, 1117, 1169
Hpy8I GTNNAC 4 cut(s) 6, 31, 110, 233
Hpy99I CGWCG 1 cut(s) 189
HpyAV CCTTC 3 cut(s) 4, 319, 1096
HpyCH4III ACNGT 5 cut(s) 656, 1076, 1081, 1161, 1166
HpyCH4IV ACGT 1 cut(s) 1003
HpyCH4V TGCA 5 cut(s) 354, 971, 1067, 1096, 1152
HpyF3I CTNAG 5 cut(s) 177, 277, 640, 836, 1034
HpySE526I ACGT 1 cut(s) 1003
Hsp92II CATG 6 cut(s) 47, 256, 392, 489, 541, 859
KpnI GGTACC 1 cut(s) 401
Ksp22I TGATCA 1 cut(s) 1086
Kzo9I GATC 5 cut(s) 87, 793, 1006, 1051, 1086
LmnI GCTCC 6 cut(s) 16, 186, 353, 679, 731, 1030
Lsp1109I GCAGC 3 cut(s) 31, 182, 1025
LweI GCATC 3 cut(s) 182, 980, 1192
MaeI CTAG 6 cut(s) 167, 404, 480, 566, 762, 1206
MaeII ACGT 1 cut(s) 1003
MaeIII GTNAC 2 cut(s) 255, 581
MalI GATC 5 cut(s) 89, 795, 1008, 1053, 1088
MboI GATC 5 cut(s) 87, 793, 1006, 1051, 1086
MboII GAAGA 5 cut(s) 208, 457, 860, 1082, 1148
MflI RGATCY 1 cut(s) 1051
MhlI GDGCHC 1 cut(s) 350
MluCI AATT 6 cut(s) 143, 410, 509, 590, 938, 1091
MmeI TCCRAC 2 cut(s) 187, 638
MseI TTAA 4 cut(s) 669, 981, 996, 1122
MslI CAYNNNNRTG 1 cut(s) 860
MspI CCGG 4 cut(s) 67, 579, 881, 1181
MspR9I CCNGG 1 cut(s) 1182
MvnI CGCG 3 cut(s) 330, 471, 756
NciI CCSGG 1 cut(s) 1182
NdeII GATC 5 cut(s) 87, 793, 1006, 1051, 1086
NlaIII CATG 6 cut(s) 47, 256, 392, 489, 541, 859
NlaIV GGNNCC 5 cut(s) 349, 399, 449, 1053, 1179
NmuCI GTSAC 1 cut(s) 581
NruI TCGCGA 2 cut(s) 330, 756
NspI RCATGY 1 cut(s) 47
PciI ACATGT 1 cut(s) 43
PcsI WCGNNNNNNNCGW 1 cut(s) 777
PfeI GAWTC 3 cut(s) 325, 441, 462
PflMI CCANNNNNTGG 4 cut(s) 394, 458, 611, 657
PkrI GCNGC 3 cut(s) 21, 172, 1040
Ppu21I YACGTR 1 cut(s) 1004
PscI ACATGT 1 cut(s) 43
PsiI TTATAA 1 cut(s) 429
PspN4I GGNNCC 5 cut(s) 349, 399, 449, 1053, 1179
PsrI GAACNNNNNNTAC 4 cut(s) 33, 65, 232, 264
PstNI CAGNNNCTG 1 cut(s) 1238
PsuI RGATCY 1 cut(s) 1051
RruI TCGCGA 2 cut(s) 330, 756
RsaI GTAC 8 cut(s) 51, 232, 399, 630, 1002, 1078, 1163, 1236
RsaNI GTAC 8 cut(s) 50, 231, 398, 629, 1001, 1077, 1162, 1235
RseI CAYNNNNRTG 1 cut(s) 860
SaqAI TTAA 4 cut(s) 669, 981, 996, 1122
SatI GCNGC 3 cut(s) 20, 171, 1039
Sau3AI GATC 5 cut(s) 87, 793, 1006, 1051, 1086
ScrFI CCNGG 1 cut(s) 1182
SduI GDGCHC 1 cut(s) 350
SfaNI GCATC 3 cut(s) 182, 980, 1192
SmiMI CAYNNNNRTG 1 cut(s) 860
SmlI CTYRAG 2 cut(s) 77, 1169
SmoI CTYRAG 2 cut(s) 77, 1169
Sse9I AATT 6 cut(s) 143, 410, 509, 590, 938, 1091
SsiI CCGC 3 cut(s) 91, 469, 694
SspMI CTAG 6 cut(s) 167, 404, 480, 566, 762, 1206
StyD4I CCNGG 1 cut(s) 1180
StyI CCWWGG 1 cut(s) 761
TaaI ACNGT 5 cut(s) 656, 1076, 1081, 1161, 1166
TaiI ACGT 1 cut(s) 1006
TaqI TCGA 3 cut(s) 187, 265, 771
TaqII GACCGA 1 cut(s) 283
TasI AATT 6 cut(s) 143, 410, 509, 590, 938, 1091
TatI WGTACW 2 cut(s) 49, 628
TfiI GAWTC 3 cut(s) 325, 441, 462
Tru1I TTAA 4 cut(s) 669, 981, 996, 1122
Tru9I TTAA 4 cut(s) 669, 981, 996, 1122
TscAI CASTG 1 cut(s) 463
TseFI GTSAC 1 cut(s) 581
TseI GCWGC 3 cut(s) 19, 170, 1038
Tsp45I GTSAC 1 cut(s) 581
TspDTI ATGAA 8 cut(s) 208, 534, 728, 861, 872, 965, 1051, 1233
TspGWI ACGGA 2 cut(s) 173, 769
TspRI CASTG 1 cut(s) 463
Van91I CCANNNNNTGG 4 cut(s) 394, 458, 611, 657
XapI RAATTY 2 cut(s) 590, 938
XceI RCATGY 1 cut(s) 47
XcmI CCANNNNNNNNNTGG 1 cut(s) 696
XmaJI CCTAGG 1 cut(s) 761
XspI CTAG 6 cut(s) 167, 404, 480, 566, 762, 1206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.