Rh5CG545800

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000139
Physical Location & Seq
Reverse (-)
76109077 .. 76111018
1942 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG545800.1

Sequence Viewer

Length: 1218 bp
ATGTCTAGCTGCGTCGTGGATCTCCCTGAAGATATTATACTCAAGATTCTGTGCCGTTTGCCGGTCAAGTCTTTGATCCGGTTCACTTGTGTCTCGAAACGGTGGCTTTCTATGATCATTTCCGATCCTCAGTTTGGAAAATCCCACCACCAACTTGCTTCTCAGCAGAGAACCCTCCGTAGAGAAGTCCTCCTCACTACCTACCCTAAACTCAGAGATCCAGGTCCAACTTCCCTTGCTCGTTCCGGTGGCTTTTTGAAGTTACCCCCTCGATTCCAATCGTTAGAGGATAACTTTTCAGTCAAAAACTTCACCATCCCATGTGAGAAGAGTGAGGATATAATAGTAATGGCCTCCTGCAATGGTTTGGTACTTGTAGGCGAAAGCAATCGTGGTTATTTGAGAAACTTGTCTATCTGGAACCCGTCTACTGGATGCTTCCGCAACCTGCCTAGGCCAAGTTTCCCGGAGAGGTCAGTACAATCAGCGGGTAATGAGTACAAGTTCTCTGTGAATTATGGTTTTGGTCATGTGTCCGCCAGTGACGACTACAAACTTGTTTTCATAATACCTGCCCTCGGTGATCTGCCGGAAGTCCATGTCTTCTCTATGAGAGCCAACATTTGGAAAGTTATTACAGCTCCTTACTCGTCATGGCCGAGATGGCGTGGTGGACAGGGGACACTTTCAAATGAAGCAATTCACTGGGTCATTCGCCGCAAAAATGAGAGTTCGGACCCAGTTATCTATGCGTTTGATTTGGCAGAGGAGGGATTTCGGCAAGTGCCATTGCCGCTTGTTTTGTGGCAAGATGAAGATGACAAGACTTCCACCGAGATAACAACTCTGGTTCATTTAGGAGGATCCCTATGCATCTTGTCTCGAAAGCATTATTTTCCCGTGAAAGGTGAAGTTTGGGCGATGACAGAGTATGGGGTGCCTGAATCTTGGGTTAAACTCTTTCAATTTGATGTACGCGATCTCCCAGATGTCTTTTCTAGAGTATACGGTCCATGGGATATGTGTTTCATTACAGAAAGCAATATAATCATGTTAAGAAGGGATAATGAGTTGTTTTGGTTTGAACGCCGTAATGAAGAGAAACTGATCTGCAGTGGACGGTATGGGATTGAGGAGGTACAACCTGAGGTGCCCGAGTGTTCGTTTTATTTTCACGCAATCGAATATGATGAAACTCTAGTTTCTGTAGCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

405

Amino Acids

46.53

Weight (kDa)

5.99

Isoelectric Point (pI)

58.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 7 - 42 1.4e-09 F-box domain
F-box-like PF12937 7 - 42 1.3e-07 F-box-like
FBA_3 PF08268 87 - 319 9.8e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000139)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08100 FvH4_1g08100 FvH4_3g41771 FvH4_3g42301 FvH4_3g42302 FvH4_3g42303 FvH4_3g42304 FvH4_3g42321 FvH4_3g42360 FvH4_3g42420 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42450 FvH4_3g42460 FvH4_3g42470 FvH4_3g42490 FvH4_3g42581 FvH4_3g42582 FvH4_5g30990 FvH4_5g30990 FvH4_5g37874 FvH4_6g47401
prunus_persica Prupe.2G278400_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.2G278600_v2.0.a1 Prupe.6G215000_v2.0.a1
pyrus_communis pycom15g26480
rosa_chinensis RchiOBHm_Chr1g0361131 RchiOBHm_Chr1g0380591 RchiOBHm_Chr1g0380601 RchiOBHm_Chr5g0075661 RchiOBHm_Chr5g0075691 RchiOBHm_Chr5g0075921 RchiOBHm_Chr5g0075931 RchiOBHm_Chr5g0075941 RchiOBHm_Chr5g0076031 RchiOBHm_Chr5g0076061 RchiOBHm_Chr5g0076091 RchiOBHm_Chr5g0076101 RchiOBHm_Chr5g0076131 RchiOBHm_Chr5g0076141 RchiOBHm_Chr5g0076151 RchiOBHm_Chr7g0226061 RchiOBHm_Chr7g0226071 RchiOBHm_Chr7g0226091 RchiOBHm_Chr7g0226431 RchiOBHm_Chr7g0226441
rosa_laevigata RLG00000027157 RLG00000036604
rosa_multiflora Rmu_co8028714.1_g000001 Rmu_co8069518.1_g000001 Rmu_co8225880.1_g000001 Rmu_co8266415.1_g000001 Rmu_sc0001470.1_g000003 Rmu_sc0001470.1_g000004 Rmu_sc0001764.1_g000007 Rmu_sc0002627.1_g000001 Rmu_sc0002652.1_g000008 Rmu_sc0002652.1_g000010 Rmu_sc0002652.1_g000011 Rmu_sc0002652.1_g000013 Rmu_sc0002652.1_g000016 Rmu_sc0002820.1_g000003 Rmu_sc0002820.1_g000004 Rmu_sc0002863.1_g000037 Rmu_sc0003016.1_g000001 Rmu_sc0003601.1_g000001 Rmu_sc0003945.1_g000010 Rmu_sc0004200.1_g000005 Rmu_sc0004250.1_g000018 Rmu_sc0004647.1_g000006 Rmu_sc0004647.1_g000007 Rmu_sc0005762.1_g000005 Rmu_sc0005762.1_g000011 Rmu_sc0005762.1_g000014 Rmu_sc0005961.1_g000010 Rmu_sc0007791.1_g000001 Rmu_sc0007791.1_g000006 Rmu_sc0007791.1_g000010 Rmu_sc0008955.1_g000006 Rmu_sc0008955.1_g000008 Rmu_sc0008955.1_g000019 Rmu_sc0008955.1_g000021 Rmu_sc0010684.1_g000002 Rmu_sc0012777.1_g000003 Rmu_sc0014532.1_g000001 Rmu_sc0018126.1_g000001 Rmu_sc0021483.1_g000001 Rmu_sc0025529.1_g000001 Rmu_sc0027085.1_g000001 Rmu_sc0027085.1_g000003 Rmu_sc0028007.1_g000001 Rmu_sc0031697.1_g000001 Rmu_sc0033228.1_g000001 Rmu_sc0039198.1_g000001 Rmu_sc0042295.1_g000001 Rmu_ssc0000123.1_g000001
rosa_roxburghii Rroxscaffold_1G00005610 Rroxscaffold_1G00005660 Rroxscaffold_1G00005670 Rroxscaffold_1G00005680 Rroxscaffold_1G00005690 Rroxscaffold_1G00005700 Rroxscaffold_1G00005710 Rroxscaffold_1G00005730 Rroxscaffold_1G00005740 Rroxscaffold_1G00005750 Rroxscaffold_1G00005760 Rroxscaffold_1G00005920 Rroxscaffold_1G00005930 Rroxscaffold_1G00006710 Rroxscaffold_2G00084870 Rroxscaffold_3G00232830 Rroxscaffold_3G00233180 Rroxscaffold_3G00233260 Rroxscaffold_3G00233280 Rroxscaffold_4G00279150 Rroxscaffold_4G00279160
rosa_rugosa Rorug01G0285800 Rorug01G0285900 Rorug01G0348200 Rorug01G0419100 Rorug01G0419100 Rorug01G0422800 Rorug01G0422900 Rorug05G0435100 Rorug05G0435100 Rorug05G0435100 Rorug05G0435200 Rorug05G0442200 Rorug05G0442200 Rorug05G0442200 Rorug05G0444000 Rorug05G0444100 Rorug05G0444200 Rorug05G0444300 Rorug05G0444400 Rorug05G0444500 Rorug05G0444600 Rorug05G0444700 Rorug05G0444800 Rorug05G0444900 Rorug05G0445000 Rorug05G0445100 Rorug05G0445700.1 Rorug05G0445900.1 Rorug07G0237200
rosa_samantha Rh1BG318300 Rh1BG402600 Rh1DG349000 Rh1DG432800 Rh5AG498500 Rh5BG519400 Rh5BG521700 Rh5BG521800 Rh5BG521900 Rh5BG522100 Rh5BG522300 Rh5BG522600 Rh5BG522700 Rh5BG523100 Rh5CG543100 Rh5CG545700 Rh5CG545800 Rh5CG545900 Rh5CG546100 Rh5CG546300 Rh5CG546500 Rh5CG547000 Rh5DG525900 Rh5DG535600 Rh7BG368800 Rh7BG368900 Rh7CG387000 Rh7CG387100 Rh7DG379900
rosa_wichuraiana Rw0G009610 Rw0G011310 Rw1G038910 Rw1G038920 Rw2G049110 Rw5G045620 Rw5G046230 Rw5G046250 Rw5G046260 Rw5G046460 Rw5G046470 Rw5G046480 Rw5G046490 Rw5G046500 Rw5G046510 Rw5G046520 Rw7G019970 Rw7G032250 Rw7G032260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 456, 580
AccB1I GGYRCC 2 cut(s) 937, 1150
AccB7I CCANNNNNTGG 1 cut(s) 624
AccI GTMKAC 2 cut(s) 428, 1005
AccII CGCG 1 cut(s) 978
AciI CCGC 5 cut(s) 442, 488, 537, 718, 794
AclWI GGATC 6 cut(s) 27, 70, 119, 212, 858, 871
AcoI YGGCCR 1 cut(s) 656
AcuI CTGAAG 1 cut(s) 48
AfaI GTAC 5 cut(s) 372, 480, 500, 975, 1140
AfiI CCNNNNNNNGG 6 cut(s) 61, 134, 431, 578, 624, 905
AgsI TTSAA 4 cut(s) 259, 690, 965, 1085
AjnI CCWGG 1 cut(s) 220
AluBI AGCT 3 cut(s) 9, 641, 1211
AluI AGCT 3 cut(s) 9, 641, 1211
Alw26I GTCTC 2 cut(s) 97, 885
AlwI GGATC 6 cut(s) 27, 70, 119, 212, 858, 871
Ama87I CYCGRG 1 cut(s) 1154
AoxI GGCC 3 cut(s) 351, 455, 656
ApeKI GCWGC 1 cut(s) 9
Asp700I GAANNNNTTC 1 cut(s) 699
AspA2I CCTAGG 1 cut(s) 452
AspS9I GGNCC 3 cut(s) 224, 736, 1010
AsuC2I CCSGG 1 cut(s) 467
AsuHPI GGTGA 3 cut(s) 304, 593, 920
AvaI CYCGRG 1 cut(s) 1154
AvaII GGWCC 3 cut(s) 224, 736, 1010
AvrII CCTAGG 1 cut(s) 452
AxyI CCTNAGG 1 cut(s) 1146
BaeGI GKGCMC 1 cut(s) 1155
BamHI GGATCC 1 cut(s) 863
BanI GGYRCC 2 cut(s) 937, 1150
BarI GAAGNNNNNNTAC 2 cut(s) 21, 53
BbsI GAAGAC 1 cut(s) 595
BccI CCATC 2 cut(s) 323, 657
BceAI ACGGC 2 cut(s) 39, 1074
BciT130I CCWGG 1 cut(s) 222
BclI TGATCA 1 cut(s) 114
BcnI CCSGG 1 cut(s) 467
BcoDI GTCTC 2 cut(s) 97, 885
BfaI CTAG 4 cut(s) 6, 453, 999, 1199
BfmI CTRYAG 2 cut(s) 1111, 1206
BfuAI ACCTGC 2 cut(s) 456, 580
BglI GCCNNNNNGGC 1 cut(s) 664
BisI GCNGC 3 cut(s) 10, 718, 794
BlnI CCTAGG 1 cut(s) 452
BlsI GCNGC 3 cut(s) 11, 719, 795
Bme1390I CCNGG 2 cut(s) 222, 467
Bme18I GGWCC 3 cut(s) 224, 736, 1010
BmeT110I CYCGRG 1 cut(s) 1154
BmgT120I GGNCC 3 cut(s) 224, 736, 1010
BmiI GGNNCC 5 cut(s) 422, 738, 865, 939, 1152
BmrFI CCNGG 2 cut(s) 222, 467
BmrI ACTGGG 2 cut(s) 715, 734
BmsI GCATC 2 cut(s) 425, 882
BmuI ACTGGG 2 cut(s) 715, 734
BpiI GAAGAC 1 cut(s) 595
BplI GAGNNNNNCTC 2 cut(s) 174, 206
BpuEI CTTGAG 1 cut(s) 26
BpuMI CCSGG 1 cut(s) 467
BsaBI GATNNNNATC 1 cut(s) 277
BsaJI CCNNGG 3 cut(s) 452, 577, 1013
BsaWI WCCGGW 2 cut(s) 78, 245
BsaXI ACNNNNNCTCC 2 cut(s) 966, 996
Bsc4I CCNNNNNNNGG 6 cut(s) 61, 134, 431, 578, 624, 905
Bse118I RCCGGY 1 cut(s) 61
Bse1I ACTGG 4 cut(s) 436, 540, 710, 740
Bse21I CCTNAGG 1 cut(s) 1146
Bse3DI GCAATG 2 cut(s) 367, 788
Bse8I GATNNNNATC 1 cut(s) 277
BseBI CCWGG 1 cut(s) 222
BseDI CCNNGG 3 cut(s) 452, 577, 1013
BseGI GGATG 2 cut(s) 315, 440
BseJI GATNNNNATC 1 cut(s) 277
BseLI CCNNNNNNNGG 6 cut(s) 61, 134, 431, 578, 624, 905
BseMI GCAATG 2 cut(s) 367, 788
BseMII CTCAG 4 cut(s) 143, 176, 226, 1137
BseNI ACTGG 4 cut(s) 436, 540, 710, 740
BseRI GAGGAG 3 cut(s) 182, 782, 1148
BseSI GKGCMC 1 cut(s) 1155
Bsh1236I CGCG 1 cut(s) 978
BshFI GGCC 3 cut(s) 353, 457, 658
BshNI GGYRCC 2 cut(s) 937, 1150
BsiHKCI CYCGRG 1 cut(s) 1154
BsiSI CCGG 5 cut(s) 62, 79, 246, 467, 590
BslFI GGGAC 1 cut(s) 694
BslI CCNNNNNNNGG 6 cut(s) 61, 134, 431, 578, 624, 905
BsmAI GTCTC 2 cut(s) 97, 885
BsmFI GGGAC 1 cut(s) 694
BsnI GGCC 3 cut(s) 353, 457, 658
BsoBI CYCGRG 1 cut(s) 1154
Bsp1286I GDGCHC 1 cut(s) 1155
Bsp143I GATC 9 cut(s) 19, 75, 114, 124, 217, 583, 863, 979, 1107
Bsp19I CCATGG 1 cut(s) 1013
BspACI CCGC 5 cut(s) 442, 488, 537, 718, 794
BspANI GGCC 3 cut(s) 353, 457, 658
BspCNI CTCAG 4 cut(s) 142, 175, 225, 1138
BspFNI CGCG 1 cut(s) 978
BspLI GGNNCC 5 cut(s) 422, 738, 865, 939, 1152
BspMAI CTGCAG 1 cut(s) 1115
BspMI ACCTGC 2 cut(s) 456, 580
BspPI GGATC 6 cut(s) 27, 70, 119, 212, 858, 871
BspT107I GGYRCC 2 cut(s) 937, 1150
BsrDI GCAATG 2 cut(s) 367, 788
BsrFI RCCGGY 1 cut(s) 61
BsrI ACTGG 4 cut(s) 436, 540, 710, 740
BssAI RCCGGY 1 cut(s) 61
BssECI CCNNGG 3 cut(s) 452, 577, 1013
BssMI GATC 9 cut(s) 19, 75, 114, 124, 217, 583, 863, 979, 1107
BssNAI GTATAC 1 cut(s) 1006
BssT1I CCWWGG 2 cut(s) 452, 1013
Bst1107I GTATAC 1 cut(s) 1006
Bst2UI CCWGG 1 cut(s) 222
Bst4CI ACNGT 3 cut(s) 102, 1010, 1122
Bst6I CTCTTC 2 cut(s) 323, 1092
BstDEI CTNAG 4 cut(s) 129, 162, 212, 1146
BstDSI CCRYGG 1 cut(s) 1013
BstF5I GGATG 2 cut(s) 315, 440
BstFNI CGCG 1 cut(s) 978
BstKTI GATC 9 cut(s) 22, 78, 117, 127, 220, 586, 866, 982, 1110
BstMAI GTCTC 2 cut(s) 97, 885
BstMBI GATC 9 cut(s) 19, 75, 114, 124, 217, 583, 863, 979, 1107
BstMWI GCNNNNNNNGC 2 cut(s) 664, 793
BstNI CCWGG 1 cut(s) 222
BstSCI CCNGG 2 cut(s) 220, 465
BstSFI CTRYAG 2 cut(s) 1111, 1206
BstSLI GKGCMC 1 cut(s) 1155
BstUI CGCG 1 cut(s) 978
BstV2I GAAGAC 1 cut(s) 595
BstX2I RGATCY 3 cut(s) 19, 217, 863
BstYI RGATCY 3 cut(s) 19, 217, 863
BstZ17I GTATAC 1 cut(s) 1006
Bsu36I CCTNAGG 1 cut(s) 1146
BsuRI GGCC 3 cut(s) 353, 457, 658
BtgI CCRYGG 1 cut(s) 1013
BtgZI GCGATG 1 cut(s) 935
BtsCI GGATG 2 cut(s) 315, 440
BtsI GCAGTG 1 cut(s) 1120
BtsIMutI CAGTG 3 cut(s) 547, 703, 1120
BveI ACCTGC 2 cut(s) 456, 580
Cfr10I RCCGGY 1 cut(s) 61
Cfr13I GGNCC 3 cut(s) 224, 736, 1010
Csp6I GTAC 5 cut(s) 371, 479, 499, 974, 1139
CviAII CATG 6 cut(s) 321, 530, 599, 654, 1014, 1051
CviJI RGCY 9 cut(s) 9, 106, 252, 353, 457, 617, 641, 658, 1211
CviKI_1 RGCY 9 cut(s) 9, 106, 252, 353, 457, 617, 641, 658, 1211
CviQI GTAC 5 cut(s) 371, 479, 499, 974, 1139
DdeI CTNAG 4 cut(s) 129, 162, 212, 1146
DpnI GATC 9 cut(s) 21, 77, 116, 126, 219, 585, 865, 981, 1109
DpnII GATC 9 cut(s) 19, 75, 114, 124, 217, 583, 863, 979, 1107
EaeI YGGCCR 1 cut(s) 656
Eam1104I CTCTTC 2 cut(s) 323, 1092
EarI CTCTTC 2 cut(s) 323, 1092
EciI GGCGGA 1 cut(s) 526
Eco130I CCWWGG 2 cut(s) 452, 1013
Eco47I GGWCC 3 cut(s) 224, 736, 1010
Eco57I CTGAAG 1 cut(s) 48
Eco81I CCTNAGG 1 cut(s) 1146
Eco88I CYCGRG 1 cut(s) 1154
EcoRII CCWGG 1 cut(s) 220
EcoT14I CCWWGG 2 cut(s) 452, 1013
EcoT22I ATGCAT 1 cut(s) 875
ErhI CCWWGG 2 cut(s) 452, 1013
FaeI CATG 6 cut(s) 324, 533, 602, 657, 1017, 1054
FaqI GGGAC 1 cut(s) 694
FatI CATG 6 cut(s) 320, 529, 598, 653, 1013, 1050
FauI CCCGC 1 cut(s) 481
FbaI TGATCA 1 cut(s) 114
FblI GTMKAC 2 cut(s) 428, 1005
Fnu4HI GCNGC 3 cut(s) 10, 718, 794
FokI GGATG 2 cut(s) 302, 447
Fsp4HI GCNGC 3 cut(s) 10, 718, 794
FspBI CTAG 4 cut(s) 6, 453, 999, 1199
GluI GCNGC 3 cut(s) 10, 718, 794
HaeIII GGCC 3 cut(s) 353, 457, 658
HapII CCGG 5 cut(s) 62, 79, 246, 467, 590
Hin1II CATG 6 cut(s) 324, 533, 602, 657, 1017, 1054
HinfI GANTC 3 cut(s) 46, 273, 944
HpaII CCGG 5 cut(s) 62, 79, 246, 467, 590
HphI GGTGA 3 cut(s) 304, 593, 920
Hpy166II GTNNAC 5 cut(s) 84, 429, 674, 1006, 1118
Hpy188I TCNGA 3 cut(s) 124, 215, 736
Hpy188III TCNNGA 5 cut(s) 43, 94, 418, 882, 999
Hpy8I GTNNAC 5 cut(s) 84, 429, 674, 1006, 1118
Hpy99I CGWCG 1 cut(s) 17
HpyAV CCTTC 1 cut(s) 1053
HpyCH4III ACNGT 3 cut(s) 102, 1010, 1122
HpyCH4V TGCA 3 cut(s) 360, 873, 1113
HpyF10VI GCNNNNNNNGC 2 cut(s) 664, 793
HpyF3I CTNAG 4 cut(s) 129, 162, 212, 1146
Hsp92II CATG 6 cut(s) 324, 533, 602, 657, 1017, 1054
Ksp22I TGATCA 1 cut(s) 114
Kzo9I GATC 9 cut(s) 19, 75, 114, 124, 217, 583, 863, 979, 1107
LmnI GCTCC 1 cut(s) 646
LweI GCATC 2 cut(s) 425, 882
MaeI CTAG 4 cut(s) 6, 453, 999, 1199
MaeIII GTNAC 2 cut(s) 261, 542
MalI GATC 9 cut(s) 21, 77, 116, 126, 219, 585, 865, 981, 1109
MboI GATC 9 cut(s) 19, 75, 114, 124, 217, 583, 863, 979, 1107
MboII GAAGA 5 cut(s) 41, 340, 595, 827, 1109
MflI RGATCY 3 cut(s) 19, 217, 863
MhlI GDGCHC 1 cut(s) 1155
MluCI AATT 3 cut(s) 514, 699, 965
MmeI TCCRAC 1 cut(s) 251
Mph1103I ATGCAT 1 cut(s) 875
MroXI GAANNNNTTC 1 cut(s) 699
MseI TTAA 2 cut(s) 954, 1055
MspA1I CMGCKG 1 cut(s) 488
MspI CCGG 5 cut(s) 62, 79, 246, 467, 590
MspR9I CCNGG 2 cut(s) 222, 467
MvaI CCWGG 1 cut(s) 222
MvnI CGCG 1 cut(s) 978
MwoI GCNNNNNNNGC 2 cut(s) 664, 793
NciI CCSGG 1 cut(s) 467
NcoI CCATGG 1 cut(s) 1013
NdeII GATC 9 cut(s) 19, 75, 114, 124, 217, 583, 863, 979, 1107
NlaIII CATG 6 cut(s) 324, 533, 602, 657, 1017, 1054
NlaIV GGNNCC 5 cut(s) 422, 738, 865, 939, 1152
NmeAIII GCCGAG 1 cut(s) 684
NmuCI GTSAC 1 cut(s) 542
NsiI ATGCAT 1 cut(s) 875
PcsI WCGNNNNNNNCGW 1 cut(s) 656
PdmI GAANNNNTTC 1 cut(s) 699
PfeI GAWTC 3 cut(s) 46, 273, 944
PflMI CCANNNNNTGG 1 cut(s) 624
PfoI TCCNGGA 1 cut(s) 465
PkrI GCNGC 3 cut(s) 11, 719, 795
Psp6I CCWGG 1 cut(s) 220
PspGI CCWGG 1 cut(s) 220
PspN4I GGNNCC 5 cut(s) 422, 738, 865, 939, 1152
PspPI GGNCC 3 cut(s) 224, 736, 1010
PstI CTGCAG 1 cut(s) 1115
PsuI RGATCY 3 cut(s) 19, 217, 863
RsaI GTAC 5 cut(s) 372, 480, 500, 975, 1140
RsaNI GTAC 5 cut(s) 371, 479, 499, 974, 1139
SaqAI TTAA 2 cut(s) 954, 1055
SatI GCNGC 3 cut(s) 10, 718, 794
Sau3AI GATC 9 cut(s) 19, 75, 114, 124, 217, 583, 863, 979, 1107
Sau96I GGNCC 3 cut(s) 224, 736, 1010
ScrFI CCNGG 2 cut(s) 222, 467
SduI GDGCHC 1 cut(s) 1155
SfaNI GCATC 2 cut(s) 425, 882
SfcI CTRYAG 2 cut(s) 1111, 1206
SinI GGWCC 3 cut(s) 224, 736, 1010
SmlI CTYRAG 1 cut(s) 41
SmoI CTYRAG 1 cut(s) 41
Sse9I AATT 3 cut(s) 514, 699, 965
SsiI CCGC 5 cut(s) 442, 488, 537, 718, 794
SspMI CTAG 4 cut(s) 6, 453, 999, 1199
StyD4I CCNGG 2 cut(s) 220, 465
StyI CCWWGG 2 cut(s) 452, 1013
TaaI ACNGT 3 cut(s) 102, 1010, 1122
TaqI TCGA 4 cut(s) 95, 271, 883, 1182
TasI AATT 3 cut(s) 514, 699, 965
TatI WGTACW 2 cut(s) 478, 498
TauI GCSGC 2 cut(s) 720, 796
TfiI GAWTC 3 cut(s) 46, 273, 944
Tru1I TTAA 2 cut(s) 954, 1055
Tru9I TTAA 2 cut(s) 954, 1055
TscAI CASTG 3 cut(s) 547, 710, 1120
TseFI GTSAC 1 cut(s) 542
TseI GCWGC 1 cut(s) 9
Tsp45I GTSAC 1 cut(s) 542
TspDTI ATGAA 7 cut(s) 553, 708, 828, 842, 1018, 1110, 1206
TspGWI ACGGA 1 cut(s) 167
TspRI CASTG 3 cut(s) 547, 710, 1120
Van91I CCANNNNNTGG 1 cut(s) 624
VpaK11BI GGWCC 3 cut(s) 224, 736, 1010
XbaI TCTAGA 1 cut(s) 998
XmaJI CCTAGG 1 cut(s) 452
XmiI GTMKAC 2 cut(s) 428, 1005
XmnI GAANNNNTTC 1 cut(s) 699
XspI CTAG 4 cut(s) 6, 453, 999, 1199
Zsp2I ATGCAT 1 cut(s) 875
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.