pycom07g06330

hydrolase activity, acting on ester bonds

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0000314
Physical Location & Seq
Reverse (-)
5608359 .. 5609123
765 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g06330.2

Sequence Viewer

Length: 501 bp
ATGAGCTGCCAACTTATGGGTACATGGGTGGAGAGTACTCAAGTCCTATGGAATATTGAAGATTGGCTAACTTATGGCCATGGTGAAAGTTATTATTCTTTTGATGACAATCACATTCATGAAAACTACGATAGGTCAACAAATGACTTTGAGTATCAAAGTGCTACCAATGAGTACATAGAGCCAATATATGAGATGCCAACTAATGATCATCTGGATGAAGAGCTTTACAATAAGGATGTGGGAGAACAAACCAACTTGTCGAAACCGATAACGGCTAAAATGGAGCTTATGGCTAGTAAAGGCAAAACACCAACACTCGGGGGGCTTAAACTTGCATCTCATGTGAAGCCCGAAGAAGAAGATAGCTCTTACACTCTCCCCCGCCAACACAAGTATGTCGTCCATGCCGAGATTTCAAAAATGACAGGGCTTGGGGTGACACATGAATGGCCTCCTCCTACAACTCCCAAGCTACCTGGTATGGTATGGCTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00130 ko01100 ko01110 map00130 map01100 map01110
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_6 MR_MLE_C

Protein Analysis

167

Amino Acids

19.1

Weight (kDa)

4.81

Isoelectric Point (pI)

54.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000314)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02272 FvH4_1g22661 FvH4_2g10242 FvH4_2g34051 FvH4_3g19221 FvH4_3g29651 FvH4_3g30891 FvH4_4g11061 FvH4_5g09250 FvH4_5g15302 FvH4_5g15303 FvH4_5g15304 FvH4_5g28521 FvH4_6g23591 FvH4_7g05710 FvH4_7g19520
pyrus_communis pycom07g06330
rosa_chinensis RchiOBHm_Chr5g0027301 RchiOBHm_Chr6g0251451 RchiOBHm_Chr6g0274861
rosa_laevigata RLG00000007850
rosa_multiflora Rmu_co8230721.1_g000001 Rmu_sc0000271.1_g000027 Rmu_sc0000303.1_g000024 Rmu_sc0000368.1_g000024 Rmu_sc0000621.1_g000037 Rmu_sc0000693.1_g000081 Rmu_sc0001229.1_g000006 Rmu_sc0001373.1_g000003 Rmu_sc0001459.1_g000001 Rmu_sc0001744.1_g000002 Rmu_sc0001909.1_g000002 Rmu_sc0002053.1_g000012 Rmu_sc0002060.1_g000015 Rmu_sc0002119.1_g000036 Rmu_sc0002177.1_g000007 Rmu_sc0002822.1_g000024 Rmu_sc0002965.1_g000015 Rmu_sc0003363.1_g000051 Rmu_sc0003500.1_g000013 Rmu_sc0004191.1_g000020 Rmu_sc0004904.1_g000032 Rmu_sc0005325.1_g000008 Rmu_sc0005947.1_g000040 Rmu_sc0006475.1_g000001 Rmu_sc0006522.1_g000019 Rmu_sc0007102.1_g000005 Rmu_sc0007810.1_g000003 Rmu_sc0008339.1_g000025 Rmu_sc0008698.1_g000004 Rmu_sc0009313.1_g000006 Rmu_sc0009850.1_g000006 Rmu_sc0010598.1_g000003 Rmu_sc0011162.1_g000002 Rmu_sc0011824.1_g000004 Rmu_sc0011900.1_g000010 Rmu_sc0012291.1_g000006 Rmu_sc0012619.1_g000003 Rmu_sc0014679.1_g000001 Rmu_sc0019053.1_g000001 Rmu_sc0021462.1_g000003 Rmu_sc0024172.1_g000001 Rmu_sc0024173.1_g000001 Rmu_ssc0000052.1_g000016 Rmu_ssc0000392.1_g000010 Rmu_ssc0000421.1_g000062 Rmu_ssc0000479.1_g000006
rosa_roxburghii Rroxscaffold_153G00436600 Rroxscaffold_1G00008580 Rroxscaffold_1G00016770 Rroxscaffold_1G00029550 Rroxscaffold_1G00036450 Rroxscaffold_1G00040410 Rroxscaffold_1G00047110 Rroxscaffold_1G00060570 Rroxscaffold_2G00081500 Rroxscaffold_2G00081510 Rroxscaffold_2G00086080 Rroxscaffold_2G00099620 Rroxscaffold_2G00099630 Rroxscaffold_2G00099640 Rroxscaffold_2G00109170 Rroxscaffold_2G00127750 Rroxscaffold_2G00128590 Rroxscaffold_2G00130780 Rroxscaffold_2G00131040 Rroxscaffold_2G00143160 Rroxscaffold_3G00229280 Rroxscaffold_3G00229290 Rroxscaffold_3G00229970 Rroxscaffold_3G00242860 Rroxscaffold_3G00242890 Rroxscaffold_3G00242900 Rroxscaffold_3G00248200 Rroxscaffold_4G00284550 Rroxscaffold_4G00288780 Rroxscaffold_4G00298620 Rroxscaffold_4G00298630 Rroxscaffold_4G00312420 Rroxscaffold_4G00320310 Rroxscaffold_4G00322220 Rroxscaffold_4G00323600 Rroxscaffold_4G00331830 Rroxscaffold_4G00332010 Rroxscaffold_4G00332020 Rroxscaffold_5G00344470 Rroxscaffold_5G00345310 Rroxscaffold_5G00356120 Rroxscaffold_5G00368700 Rroxscaffold_5G00379820 Rroxscaffold_5G00382480 Rroxscaffold_6G00395080 Rroxscaffold_6G00405520 Rroxscaffold_6G00428210 Rroxscaffold_7G00193460
rosa_samantha Rh7CG413200 Rh7DG284900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 16
AciI CCGC 1 cut(s) 385
AcoI YGGCCR 1 cut(s) 76
AfaI GTAC 3 cut(s) 22, 37, 176
AfiI CCNNNNNNNGG 2 cut(s) 16, 320
AgsI TTSAA 2 cut(s) 59, 420
AjnI CCWGG 1 cut(s) 478
AluBI AGCT 5 cut(s) 6, 226, 289, 369, 475
AluI AGCT 5 cut(s) 6, 226, 289, 369, 475
Ama87I CYCGRG 1 cut(s) 320
AoxI GGCC 2 cut(s) 76, 452
ApeKI GCWGC 1 cut(s) 6
AsuHPI GGTGA 2 cut(s) 95, 451
AvaI CYCGRG 1 cut(s) 320
BaeI ACNNNNGTAYC 2 cut(s) 12, 45
BalI TGGCCA 1 cut(s) 78
BceAI ACGGC 1 cut(s) 291
BciT130I CCWGG 1 cut(s) 480
BclI TGATCA 1 cut(s) 208
BfaI CTAG 1 cut(s) 297
BisI GCNGC 1 cut(s) 7
BlsI GCNGC 1 cut(s) 8
BmcAI AGTACT 1 cut(s) 37
Bme1390I CCNGG 1 cut(s) 480
BmeT110I CYCGRG 1 cut(s) 320
BmrFI CCNGG 1 cut(s) 480
BmsI GCATC 2 cut(s) 186, 347
BpuEI CTTGAG 1 cut(s) 24
BsaBI GATNNNNATC 1 cut(s) 108
BsaJI CCNNGG 1 cut(s) 79
Bsc4I CCNNNNNNNGG 2 cut(s) 16, 320
Bse8I GATNNNNATC 1 cut(s) 108
BseBI CCWGG 1 cut(s) 480
BseDI CCNNGG 1 cut(s) 79
BseGI GGATG 2 cut(s) 223, 244
BseJI GATNNNNATC 1 cut(s) 108
BseLI CCNNNNNNNGG 2 cut(s) 16, 320
BseRI GAGGAG 1 cut(s) 447
BshFI GGCC 2 cut(s) 78, 454
BsiHKCI CYCGRG 1 cut(s) 320
BslI CCNNNNNNNGG 2 cut(s) 16, 320
BsnI GGCC 2 cut(s) 78, 454
BsoBI CYCGRG 1 cut(s) 320
Bsp143I GATC 1 cut(s) 208
Bsp19I CCATGG 1 cut(s) 79
BspACI CCGC 1 cut(s) 385
BspANI GGCC 2 cut(s) 78, 454
BspHI TCATGA 1 cut(s) 118
BspQI GCTCTTC 1 cut(s) 216
BssECI CCNNGG 1 cut(s) 79
BssMI GATC 1 cut(s) 208
BssT1I CCWWGG 1 cut(s) 79
Bst2UI CCWGG 1 cut(s) 480
Bst6I CTCTTC 1 cut(s) 216
BstDSI CCRYGG 1 cut(s) 79
BstF5I GGATG 2 cut(s) 223, 244
BstKTI GATC 1 cut(s) 211
BstMBI GATC 1 cut(s) 208
BstNI CCWGG 1 cut(s) 480
BstSCI CCNGG 1 cut(s) 478
BsuRI GGCC 2 cut(s) 78, 454
BtgI CCRYGG 1 cut(s) 79
BtsCI GGATG 2 cut(s) 223, 244
CciI TCATGA 1 cut(s) 118
CsiI ACCWGGT 1 cut(s) 478
Csp6I GTAC 3 cut(s) 21, 36, 175
CviAII CATG 6 cut(s) 24, 80, 119, 344, 407, 446
CviQI GTAC 3 cut(s) 21, 36, 175
DpnI GATC 1 cut(s) 210
DpnII GATC 1 cut(s) 208
EaeI YGGCCR 1 cut(s) 76
Eam1104I CTCTTC 1 cut(s) 216
EarI CTCTTC 1 cut(s) 216
Eco130I CCWWGG 1 cut(s) 79
Eco88I CYCGRG 1 cut(s) 320
EcoRII CCWGG 1 cut(s) 478
EcoT14I CCWWGG 1 cut(s) 79
ErhI CCWWGG 1 cut(s) 79
FaeI CATG 6 cut(s) 27, 83, 122, 347, 410, 449
FatI CATG 6 cut(s) 23, 79, 118, 343, 406, 445
FauI CCCGC 1 cut(s) 392
FbaI TGATCA 1 cut(s) 208
Fnu4HI GCNGC 1 cut(s) 7
FokI GGATG 2 cut(s) 230, 251
Fsp4HI GCNGC 1 cut(s) 7
FspBI CTAG 1 cut(s) 297
GluI GCNGC 1 cut(s) 7
HaeIII GGCC 2 cut(s) 78, 454
Hin1II CATG 6 cut(s) 27, 83, 122, 347, 410, 449
HincII GTYRAC 1 cut(s) 138
HindII GTYRAC 1 cut(s) 138
HphI GGTGA 2 cut(s) 95, 451
Hpy166II GTNNAC 1 cut(s) 138
Hpy188III TCNNGA 2 cut(s) 119, 215
Hpy8I GTNNAC 1 cut(s) 138
HpyCH4V TGCA 1 cut(s) 338
Hsp92II CATG 6 cut(s) 27, 83, 122, 347, 410, 449
Ksp22I TGATCA 1 cut(s) 208
Kzo9I GATC 1 cut(s) 208
LguI GCTCTTC 1 cut(s) 216
LmnI GCTCC 1 cut(s) 286
LpnPI CCDG 4 cut(s) 200, 414, 465, 492
LweI GCATC 2 cut(s) 186, 347
MabI ACCWGGT 1 cut(s) 478
MaeI CTAG 1 cut(s) 297
MaeIII GTNAC 1 cut(s) 439
MalI GATC 1 cut(s) 210
MboI GATC 1 cut(s) 208
MboII GAAGA 5 cut(s) 71, 233, 368, 371, 374
MlsI TGGCCA 1 cut(s) 78
MluCI AATT 1 cut(s) 495
MluNI TGGCCA 1 cut(s) 78
MnlI CCTC 2 cut(s) 465, 468
Mox20I TGGCCA 1 cut(s) 78
MscI TGGCCA 1 cut(s) 78
MseI TTAA 2 cut(s) 330, 499
MslI CAYNNNNRTG 4 cut(s) 117, 216, 396, 448
Msp20I TGGCCA 1 cut(s) 78
MspR9I CCNGG 1 cut(s) 480
MvaI CCWGG 1 cut(s) 480
NcoI CCATGG 1 cut(s) 79
NdeII GATC 1 cut(s) 208
NlaIII CATG 6 cut(s) 27, 83, 122, 347, 410, 449
NmeAIII GCCGAG 1 cut(s) 436
NmuCI GTSAC 1 cut(s) 439
PagI TCATGA 1 cut(s) 118
PciSI GCTCTTC 1 cut(s) 216
PcsI WCGNNNNNNNCGW 1 cut(s) 408
PflMI CCANNNNNTGG 1 cut(s) 16
PkrI GCNGC 1 cut(s) 8
Psp6I CCWGG 1 cut(s) 478
PspGI CCWGG 1 cut(s) 478
RsaI GTAC 3 cut(s) 22, 37, 176
RsaNI GTAC 3 cut(s) 21, 36, 175
RseI CAYNNNNRTG 4 cut(s) 117, 216, 396, 448
SapI GCTCTTC 1 cut(s) 216
SaqAI TTAA 2 cut(s) 330, 499
SatI GCNGC 1 cut(s) 7
Sau3AI GATC 1 cut(s) 208
ScaI AGTACT 1 cut(s) 37
ScrFI CCNGG 1 cut(s) 480
SetI ASST 7 cut(s) 8, 137, 228, 291, 371, 477, 481
SexAI ACCWGGT 1 cut(s) 478
SfaNI GCATC 2 cut(s) 186, 347
SmiMI CAYNNNNRTG 4 cut(s) 117, 216, 396, 448
SmlI CTYRAG 1 cut(s) 39
SmoI CTYRAG 1 cut(s) 39
Sse9I AATT 1 cut(s) 495
SsiI CCGC 1 cut(s) 385
SspI AATATT 1 cut(s) 55
SspMI CTAG 1 cut(s) 297
StyD4I CCNGG 1 cut(s) 478
StyI CCWWGG 1 cut(s) 79
TaqI TCGA 1 cut(s) 263
TasI AATT 1 cut(s) 495
TatI WGTACW 2 cut(s) 35, 174
Tru1I TTAA 2 cut(s) 330, 499
Tru9I TTAA 2 cut(s) 330, 499
TseFI GTSAC 1 cut(s) 439
TseI GCWGC 1 cut(s) 6
Tsp45I GTSAC 1 cut(s) 439
TspDTI ATGAA 4 cut(s) 107, 135, 234, 462
Van91I CCANNNNNTGG 1 cut(s) 16
XspI CTAG 1 cut(s) 297
ZrmI AGTACT 1 cut(s) 37
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.