Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002177.1

Orthogroup ID

OG0000314

Physical Location & Seq

Genomic Coordinates Reverse (-)

29620 .. 36435

Gene Structure 6816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002177.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

atggccaatgttgccgccattggcgacactacgacaagagaggccttcgttccaaagcctattccagagggagcgactttcgaggaaaagttcgcaatcatcatggagaataacgagagacatcgtaaaaagcgcattgcccagcgtgctaaggataccaggcgacaaattgcacagtcagagaatgcagtaagggcacatgctagagatatcgctgatgagcagagtttgcgacaaaggcaagccatggaggccatcccgaaccaaaacaagcagacctcattggagttcgcgaccttgcacaaagaaggtggcgataaacctgaatgcctcactgatgagtcacaaccttacatagaggttgtacatggagaagatgatcaacgaaattatgcatgggggcatgatattgcccaggctcacccccttgataaccaaaagcatgtgcataatcaatttaattatgactctgctactggatgtcatgatcatgcaaagggccacaagcatgatccacttaattatcaattaaggcatggcccacctcattatcatcaattttgctttggctatgccactggacgtcatggtgaagcgttggctttgatatacatgaaggatacatctgcaacccaccttgaaagaatggccagaataattattctattggccaatttgtccttcgcgacttccatagaggcatctcaatttgatgcctggaaagtggacagaggcaaacaaatatttgatatgcctatctttgaagaagagatcaactcaccactctttggtgattctaaatatgatctcagcacggagccaatctatgataagtatgatgataattataatttaattattggttccaaaaatcaaatgcaggagttcaagtgctttgaagcttttgatatggaggactcaaaccaacaagtggtcaaacgcaaaagccaatctgtggctaattcgaaagacaccatgttctatgacatggtagttggcgacaaagccgatcttgggacatcgaacttagaaccaggtcttgttgacaaattgatagatggccaggatggcctcagcagtagcacacgtctgggtgatcaacctctggaggagggatttataaagatttcttgggtgaaattgttgcagtggcacatactatatggttactatatcctttgtggtgagaatgccaactctccaattaatctctacgattacacaagtctccccggagcaacttctcttaccggtgaccacactccagtcccagtctcttcaagagccgactgtcagtgccaccaaaccaacccggcgacagtacttccagccccagtctccctaggagtcgacttccagtaccactaccaccgagactacctcgaccagcgaagcaagggtaacgcctcgcaacccagcgaagctgaagataagctttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004652 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006276 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0034641 GO:0043170 GO:0043412 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070566 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

479

Amino Acids

54.18

Weight (kDa)

5.47

Isoelectric Point (pI)

49.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000314)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02272 FvH4_1g22661 FvH4_2g10242 FvH4_2g34051 FvH4_3g19221 FvH4_3g29651 FvH4_3g30891 FvH4_4g11061 FvH4_5g09250 FvH4_5g15302 FvH4_5g15303 FvH4_5g15304 FvH4_5g28521 FvH4_6g23591 FvH4_7g05710 FvH4_7g19520
pyrus_communis	pycom07g06330
rosa_chinensis	RchiOBHm_Chr5g0027301 RchiOBHm_Chr6g0251451 RchiOBHm_Chr6g0274861
rosa_laevigata	RLG00000007850
rosa_multiflora	Rmu_co8230721.1_g000001 Rmu_sc0000271.1_g000027 Rmu_sc0000303.1_g000024 Rmu_sc0000368.1_g000024 Rmu_sc0000621.1_g000037 Rmu_sc0000693.1_g000081 Rmu_sc0001229.1_g000006 Rmu_sc0001373.1_g000003 Rmu_sc0001459.1_g000001 Rmu_sc0001744.1_g000002 Rmu_sc0001909.1_g000002 Rmu_sc0002053.1_g000012 Rmu_sc0002060.1_g000015 Rmu_sc0002119.1_g000036 Rmu_sc0002177.1_g000007 Rmu_sc0002822.1_g000024 Rmu_sc0002965.1_g000015 Rmu_sc0003363.1_g000051 Rmu_sc0003500.1_g000013 Rmu_sc0004191.1_g000020 Rmu_sc0004904.1_g000032 Rmu_sc0005325.1_g000008 Rmu_sc0005947.1_g000040 Rmu_sc0006475.1_g000001 Rmu_sc0006522.1_g000019 Rmu_sc0007102.1_g000005 Rmu_sc0007810.1_g000003 Rmu_sc0008339.1_g000025 Rmu_sc0008698.1_g000004 Rmu_sc0009313.1_g000006 Rmu_sc0009850.1_g000006 Rmu_sc0010598.1_g000003 Rmu_sc0011162.1_g000002 Rmu_sc0011824.1_g000004 Rmu_sc0011900.1_g000010 Rmu_sc0012291.1_g000006 Rmu_sc0012619.1_g000003 Rmu_sc0014679.1_g000001 Rmu_sc0019053.1_g000001 Rmu_sc0021462.1_g000003 Rmu_sc0024172.1_g000001 Rmu_sc0024173.1_g000001 Rmu_ssc0000052.1_g000016 Rmu_ssc0000392.1_g000010 Rmu_ssc0000421.1_g000062 Rmu_ssc0000479.1_g000006
rosa_roxburghii	Rroxscaffold_153G00436600 Rroxscaffold_1G00008580 Rroxscaffold_1G00016770 Rroxscaffold_1G00029550 Rroxscaffold_1G00036450 Rroxscaffold_1G00040410 Rroxscaffold_1G00047110 Rroxscaffold_1G00060570 Rroxscaffold_2G00081500 Rroxscaffold_2G00081510 Rroxscaffold_2G00086080 Rroxscaffold_2G00099620 Rroxscaffold_2G00099630 Rroxscaffold_2G00099640 Rroxscaffold_2G00109170 Rroxscaffold_2G00127750 Rroxscaffold_2G00128590 Rroxscaffold_2G00130780 Rroxscaffold_2G00131040 Rroxscaffold_2G00143160 Rroxscaffold_3G00229280 Rroxscaffold_3G00229290 Rroxscaffold_3G00229970 Rroxscaffold_3G00242860 Rroxscaffold_3G00242890 Rroxscaffold_3G00242900 Rroxscaffold_3G00248200 Rroxscaffold_4G00284550 Rroxscaffold_4G00288780 Rroxscaffold_4G00298620 Rroxscaffold_4G00298630 Rroxscaffold_4G00312420 Rroxscaffold_4G00320310 Rroxscaffold_4G00322220 Rroxscaffold_4G00323600 Rroxscaffold_4G00331830 Rroxscaffold_4G00332010 Rroxscaffold_4G00332020 Rroxscaffold_5G00344470 Rroxscaffold_5G00345310 Rroxscaffold_5G00356120 Rroxscaffold_5G00368700 Rroxscaffold_5G00379820 Rroxscaffold_5G00382480 Rroxscaffold_6G00395080 Rroxscaffold_6G00405520 Rroxscaffold_6G00428210 Rroxscaffold_7G00193460
rosa_samantha	Rh7CG413200 Rh7DG284900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	849, 1121
AatII	GACGTC	1 cut(s)	586
AccB7I	CCANNNNNTGG	3 cut(s)	788, 931, 955
AccI	GTMKAC	1 cut(s)	1350
AccII	CGCG	2 cut(s)	293, 686
AciI	CCGC	1 cut(s)	15
AclWI	GGATC	1 cut(s)	506
AcoI	YGGCCR	4 cut(s)	3, 648, 669, 1060
AcyI	GRCGYC	1 cut(s)	583
AfaI	GTAC	3 cut(s)	366, 1323, 1361
AfiI	CCNNNNNNNGG	4 cut(s)	788, 931, 955, 1014
AflIII	ACRYGT	1 cut(s)	1085
AgeI	ACCGGT	1 cut(s)	1250
AgsI	TTSAA	5 cut(s)	641, 764, 889, 899, 1281
AjiI	CACGTC	1 cut(s)	1088
AjnI	CCWGG	5 cut(s)	158, 414, 716, 1033, 1062
AjuI	GAANNNNNNNTTGG	2 cut(s)	665, 697
AluBI	AGCT	3 cut(s)	902, 1424, 1435
AluI	AGCT	3 cut(s)	902, 1424, 1435
Alw26I	GTCTC	5 cut(s)	112, 1232, 1279, 1342, 1368
AlwI	GGATC	1 cut(s)	506
AoxI	GGCC	9 cut(s)	3, 42, 252, 499, 538, 648, 669, 1060, 1069
AseI	ATTAAT	1 cut(s)	1206
AsiGI	ACCGGT	1 cut(s)	1250
AspA2I	CCTAGG	1 cut(s)	1342
AspLEI	GCGC	1 cut(s)	135
AspS9I	GGNCC	2 cut(s)	499, 539
AsuC2I	CCSGG	2 cut(s)	1233, 1313
AsuHPI	GGTGA	8 cut(s)	413, 602, 771, 803, 1106, 1147, 1196, 1265
AsuII	TTCGAA	1 cut(s)	965
AvrII	CCTAGG	1 cut(s)	1342
BaeGI	GKGCMC	1 cut(s)	199
BalI	TGGCCA	4 cut(s)	5, 650, 671, 1062
BbvCI	CCTCAGC	1 cut(s)	1073
BccI	CCATC	3 cut(s)	263, 1052, 1061
BciT130I	CCWGG	5 cut(s)	160, 416, 718, 1035, 1064
BciVI	GTATCC	2 cut(s)	148, 613
BclI	TGATCA	3 cut(s)	379, 487, 1096
BcnI	CCSGG	2 cut(s)	1233, 1313
BcoDI	GTCTC	5 cut(s)	112, 1232, 1279, 1342, 1368
BfaI	CTAG	2 cut(s)	204, 1343
BfuI	GTATCC	2 cut(s)	148, 613
BglI	GCCNNNNNGGC	2 cut(s)	251, 1068
BisI	GCNGC	1 cut(s)	15
BlnI	CCTAGG	1 cut(s)	1342
BlsI	GCNGC	1 cut(s)	16
BmcAI	AGTACT	1 cut(s)	1323
Bme1390I	CCNGG	7 cut(s)	160, 416, 718, 1035, 1064, 1233, 1313
BmgBI	CACGTC	1 cut(s)	1088
BmgT120I	GGNCC	2 cut(s)	499, 539
BmiI	GGNNCC	2 cut(s)	819, 865
BmrFI	CCNGG	7 cut(s)	160, 416, 718, 1035, 1064, 1233, 1313
BmrI	ACTGGG	2 cut(s)	1265, 1328
BmsI	GCATC	2 cut(s)	703, 710
BmuI	ACTGGG	2 cut(s)	1265, 1328
BplI	GAGNNNNNCTC	4 cut(s)	761, 793, 1365, 1397
BpmI	CTGGAG	2 cut(s)	1127, 1248
Bpu10I	CCTNAGC	2 cut(s)	150, 1073
Bpu14I	TTCGAA	1 cut(s)	965
BpuMI	CCSGG	2 cut(s)	1233, 1313
BsaHI	GRCGYC	1 cut(s)	583
BsaJI	CCNNGG	4 cut(s)	246, 414, 1231, 1342
BsaWI	WCCGGW	1 cut(s)	1250
BsaXI	ACNNNNNCTCC	2 cut(s)	875, 905
Bsc4I	CCNNNNNNNGG	4 cut(s)	788, 931, 955, 1014
Bse118I	RCCGGY	1 cut(s)	1250
Bse1I	ACTGG	6 cut(s)	481, 583, 1265, 1271, 1334, 1357
Bse3DI	GCAATG	1 cut(s)	135
BseBI	CCWGG	5 cut(s)	160, 416, 718, 1035, 1064
BseDI	CCNNGG	4 cut(s)	246, 414, 1231, 1342
BseGI	GGATG	3 cut(s)	255, 485, 1072
BseLI	CCNNNNNNNGG	4 cut(s)	788, 931, 955, 1014
BseMI	GCAATG	1 cut(s)	135
BseMII	CTCAG	2 cut(s)	823, 1087
BseNI	ACTGG	6 cut(s)	481, 583, 1265, 1271, 1334, 1357
BseRI	GAGGAG	1 cut(s)	1124
BseSI	GKGCMC	1 cut(s)	199
BseYI	CCCAGC	2 cut(s)	141, 1415
Bsh1236I	CGCG	2 cut(s)	293, 686
BshFI	GGCC	9 cut(s)	5, 44, 254, 501, 540, 650, 671, 1062, 1071
BshTI	ACCGGT	1 cut(s)	1250
BsiSI	CCGG	3 cut(s)	1233, 1251, 1313
BslFI	GGGAC	2 cut(s)	1030, 1253
BslI	CCNNNNNNNGG	4 cut(s)	788, 931, 955, 1014
BsmAI	GTCTC	5 cut(s)	112, 1232, 1279, 1342, 1368
BsmFI	GGGAC	2 cut(s)	1030, 1253
BsmI	GAATGC	3 cut(s)	190, 332, 1195
BsnI	GGCC	9 cut(s)	5, 44, 254, 501, 540, 650, 671, 1062, 1071
Bsp119I	TTCGAA	1 cut(s)	965
Bsp1286I	GDGCHC	1 cut(s)	199
Bsp1407I	TGTACA	1 cut(s)	364
Bsp143I	GATC	7 cut(s)	379, 487, 511, 771, 805, 1009, 1096
Bsp19I	CCATGG	1 cut(s)	246
Bsp68I	TCGCGA	2 cut(s)	293, 686
BspACI	CCGC	1 cut(s)	15
BspANI	GGCC	9 cut(s)	5, 44, 254, 501, 540, 650, 671, 1062, 1071
BspCNI	CTCAG	2 cut(s)	822, 1086
BspFNI	CGCG	2 cut(s)	293, 686
BspHI	TCATGA	1 cut(s)	484
BspLI	GGNNCC	2 cut(s)	819, 865
BspPI	GGATC	1 cut(s)	506
BspT104I	TTCGAA	1 cut(s)	965
BsrDI	GCAATG	1 cut(s)	135
BsrFI	RCCGGY	1 cut(s)	1250
BsrGI	TGTACA	1 cut(s)	364
BsrI	ACTGG	6 cut(s)	481, 583, 1265, 1271, 1334, 1357
BssAI	RCCGGY	1 cut(s)	1250
BssECI	CCNNGG	4 cut(s)	246, 414, 1231, 1342
BssMI	GATC	7 cut(s)	379, 487, 511, 771, 805, 1009, 1096
BssNI	GRCGYC	1 cut(s)	583
BssT1I	CCWWGG	2 cut(s)	246, 1342
Bst2UI	CCWGG	5 cut(s)	160, 416, 718, 1035, 1064
Bst4CI	ACNGT	3 cut(s)	177, 1292, 1321
Bst6I	CTCTTC	2 cut(s)	762, 1282
BstACI	GRCGYC	1 cut(s)	583
BstAPI	GCANNNNNTGC	1 cut(s)	229
BstAUI	TGTACA	1 cut(s)	364
BstBI	TTCGAA	1 cut(s)	965
BstC8I	GCNNGC	2 cut(s)	147, 243
BstDEI	CTNAG	4 cut(s)	150, 809, 1027, 1073
BstDSI	CCRYGG	1 cut(s)	246
BstEII	GGTNACC	1 cut(s)	1253
BstF5I	GGATG	3 cut(s)	255, 485, 1072
BstFNI	CGCG	2 cut(s)	293, 686
BstHHI	GCGC	1 cut(s)	135
BstKTI	GATC	7 cut(s)	382, 490, 514, 774, 808, 1012, 1099
BstMAI	GTCTC	5 cut(s)	112, 1232, 1279, 1342, 1368
BstMBI	GATC	7 cut(s)	379, 487, 511, 771, 805, 1009, 1096
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 146, 194, 229, 238, 251, 1068
BstNI	CCWGG	5 cut(s)	160, 416, 718, 1035, 1064
BstNSI	RCATGY	2 cut(s)	203, 446
BstPI	GGTNACC	1 cut(s)	1253
BstSCI	CCNGG	7 cut(s)	158, 414, 716, 1033, 1062, 1231, 1311
BstSLI	GKGCMC	1 cut(s)	199
BstUI	CGCG	2 cut(s)	293, 686
BsuI	GTATCC	2 cut(s)	148, 613
BsuRI	GGCC	9 cut(s)	5, 44, 254, 501, 540, 650, 671, 1062, 1071
BtgI	CCRYGG	1 cut(s)	246
BtrI	CACGTC	1 cut(s)	1088
BtsCI	GGATG	3 cut(s)	255, 485, 1072
BtsI	GCAGTG	1 cut(s)	1154
BtsIMutI	CAGTG	4 cut(s)	333, 576, 1154, 1301
BtuMI	TCGCGA	2 cut(s)	293, 686
Cac8I	GCNNGC	2 cut(s)	147, 243
CciI	TCATGA	1 cut(s)	484
CfoI	GCGC	1 cut(s)	135
Cfr10I	RCCGGY	1 cut(s)	1250
Cfr13I	GGNCC	2 cut(s)	499, 539
CsiI	ACCWGGT	1 cut(s)	1033
Csp6I	GTAC	3 cut(s)	365, 1322, 1360
CspAI	ACCGGT	1 cut(s)	1250
CspCI	CAANNNNNGTGG	2 cut(s)	292, 327
CviQI	GTAC	3 cut(s)	365, 1322, 1360
DdeI	CTNAG	4 cut(s)	150, 809, 1027, 1073
DpnI	GATC	7 cut(s)	381, 489, 513, 773, 807, 1011, 1098
DpnII	GATC	7 cut(s)	379, 487, 511, 771, 805, 1009, 1096
EaeI	YGGCCR	4 cut(s)	3, 648, 669, 1060
Eam1104I	CTCTTC	2 cut(s)	762, 1282
EarI	CTCTTC	2 cut(s)	762, 1282
Eco130I	CCWWGG	2 cut(s)	246, 1342
Eco147I	AGGCCT	1 cut(s)	44
Eco32I	GATATC	1 cut(s)	211
Eco91I	GGTNACC	1 cut(s)	1253
EcoO65I	GGTNACC	1 cut(s)	1253
EcoRII	CCWGG	5 cut(s)	158, 414, 716, 1033, 1062
EcoRV	GATATC	1 cut(s)	211
EcoT14I	CCWWGG	2 cut(s)	246, 1342
EcoT22I	ATGCAT	1 cut(s)	397
ErhI	CCWWGG	2 cut(s)	246, 1342
FalI	AAGNNNNNCTT	3 cut(s)	996, 1028, 1419
FaqI	GGGAC	2 cut(s)	1030, 1253
FbaI	TGATCA	3 cut(s)	379, 487, 1096
FblI	GTMKAC	1 cut(s)	1350
Fnu4HI	GCNGC	1 cut(s)	15
FokI	GGATG	3 cut(s)	242, 492, 1079
Fsp4HI	GCNGC	1 cut(s)	15
FspBI	CTAG	2 cut(s)	204, 1343
GlaI	GCGC	1 cut(s)	134
GluI	GCNGC	1 cut(s)	15
GsaI	CCCAGC	2 cut(s)	145, 1419
GsuI	CTGGAG	2 cut(s)	1127, 1248
HaeIII	GGCC	9 cut(s)	5, 44, 254, 501, 540, 650, 671, 1062, 1071
HapII	CCGG	3 cut(s)	1233, 1251, 1313
HhaI	GCGC	1 cut(s)	135
Hin1I	GRCGYC	1 cut(s)	583
Hin6I	GCGC	1 cut(s)	133
HinP1I	GCGC	1 cut(s)	133
HincII	GTYRAC	2 cut(s)	1045, 1351
HindII	GTYRAC	2 cut(s)	1045, 1351
HindIII	AAGCTT	2 cut(s)	900, 1433
HinfI	GANTC	5 cut(s)	341, 467, 794, 917, 1347
HpaII	CCGG	3 cut(s)	1233, 1251, 1313
HphI	GGTGA	8 cut(s)	413, 602, 771, 803, 1106, 1147, 1196, 1265
Hpy166II	GTNNAC	3 cut(s)	727, 1045, 1351
Hpy188I	TCNGA	1 cut(s)	181
Hpy188III	TCNNGA	7 cut(s)	65, 259, 292, 485, 685, 1106, 1281
Hpy8I	GTNNAC	3 cut(s)	727, 1045, 1351
HpyAV	CCTTC	4 cut(s)	55, 302, 610, 691
HpyCH4III	ACNGT	3 cut(s)	177, 1292, 1321
HpyCH4IV	ACGT	2 cut(s)	583, 1087
HpyCH4V	TGCA	9 cut(s)	173, 188, 301, 395, 448, 494, 629, 880, 1147
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 146, 194, 229, 238, 251, 1068
HpyF3I	CTNAG	4 cut(s)	150, 809, 1027, 1073
HpySE526I	ACGT	2 cut(s)	583, 1087
Hsp92I	GRCGYC	1 cut(s)	583
HspAI	GCGC	1 cut(s)	133
Ksp22I	TGATCA	3 cut(s)	379, 487, 1096
Kzo9I	GATC	7 cut(s)	379, 487, 511, 771, 805, 1009, 1096
LmnI	GCTCC	3 cut(s)	71, 817, 1235
LweI	GCATC	2 cut(s)	703, 710
MabI	ACCWGGT	1 cut(s)	1033
MaeI	CTAG	2 cut(s)	204, 1343
MaeII	ACGT	2 cut(s)	583, 1087
MaeIII	GTNAC	4 cut(s)	342, 1166, 1253, 1400
MalI	GATC	7 cut(s)	381, 489, 513, 773, 807, 1011, 1098
MboI	GATC	7 cut(s)	379, 487, 511, 771, 805, 1009, 1096
MboII	GAAGA	5 cut(s)	386, 776, 779, 1269, 1439
MhlI	GDGCHC	1 cut(s)	199
MlsI	TGGCCA	4 cut(s)	5, 650, 671, 1062
MluNI	TGGCCA	4 cut(s)	5, 650, 671, 1062
MlyI	GAGTC	4 cut(s)	350, 461, 911, 1356
Mox20I	TGGCCA	4 cut(s)	5, 650, 671, 1062
Mph1103I	ATGCAT	1 cut(s)	397
MscI	TGGCCA	4 cut(s)	5, 650, 671, 1062
MseI	TTAA	5 cut(s)	459, 519, 530, 854, 1206
MslI	CAYNNNNRTG	2 cut(s)	489, 507
Msp20I	TGGCCA	4 cut(s)	5, 650, 671, 1062
MspI	CCGG	3 cut(s)	1233, 1251, 1313
MspR9I	CCNGG	7 cut(s)	160, 416, 718, 1035, 1064, 1233, 1313
Mva1269I	GAATGC	3 cut(s)	190, 332, 1195
MvaI	CCWGG	5 cut(s)	160, 416, 718, 1035, 1064
MvnI	CGCG	2 cut(s)	293, 686
MwoI	GCNNNNNNNGC	7 cut(s)	11, 146, 194, 229, 238, 251, 1068
NciI	CCSGG	2 cut(s)	1233, 1313
NcoI	CCATGG	1 cut(s)	246
NdeII	GATC	7 cut(s)	379, 487, 511, 771, 805, 1009, 1096
NlaIV	GGNNCC	2 cut(s)	819, 865
NmuCI	GTSAC	2 cut(s)	342, 1253
NruI	TCGCGA	2 cut(s)	293, 686
NsiI	ATGCAT	1 cut(s)	397
NspI	RCATGY	2 cut(s)	203, 446
NspV	TTCGAA	1 cut(s)	965
PagI	TCATGA	1 cut(s)	484
PceI	AGGCCT	1 cut(s)	44
PctI	GAATGC	3 cut(s)	190, 332, 1195
PfeI	GAWTC	1 cut(s)	794
PflMI	CCANNNNNTGG	3 cut(s)	788, 931, 955
PinAI	ACCGGT	1 cut(s)	1250
PkrI	GCNGC	1 cut(s)	16
PleI	GAGTC	4 cut(s)	349, 461, 911, 1355
PpsI	GAGTC	4 cut(s)	349, 461, 911, 1355
PshBI	ATTAAT	1 cut(s)	1206
PsiI	TTATAA	2 cut(s)	849, 1121
Psp6I	CCWGG	5 cut(s)	158, 414, 716, 1033, 1062
PspEI	GGTNACC	1 cut(s)	1253
PspFI	CCCAGC	2 cut(s)	141, 1415
PspGI	CCWGG	5 cut(s)	158, 414, 716, 1033, 1062
PspN4I	GGNNCC	2 cut(s)	819, 865
PspPI	GGNCC	2 cut(s)	499, 539
RruI	TCGCGA	2 cut(s)	293, 686
RsaI	GTAC	3 cut(s)	366, 1323, 1361
RsaNI	GTAC	3 cut(s)	365, 1322, 1360
RseI	CAYNNNNRTG	2 cut(s)	489, 507
SalI	GTCGAC	1 cut(s)	1349
SaqAI	TTAA	5 cut(s)	459, 519, 530, 854, 1206
SatI	GCNGC	1 cut(s)	15
Sau3AI	GATC	7 cut(s)	379, 487, 511, 771, 805, 1009, 1096
Sau96I	GGNCC	2 cut(s)	499, 539
ScaI	AGTACT	1 cut(s)	1323
SchI	GAGTC	4 cut(s)	350, 461, 911, 1356
ScrFI	CCNGG	7 cut(s)	160, 416, 718, 1035, 1064, 1233, 1313
SduI	GDGCHC	1 cut(s)	199
SexAI	ACCWGGT	1 cut(s)	1033
SfaNI	GCATC	2 cut(s)	703, 710
SfiI	GGCCNNNNNGGCC	1 cut(s)	1068
SfuI	TTCGAA	1 cut(s)	965
SmiMI	CAYNNNNRTG	2 cut(s)	489, 507
SseBI	AGGCCT	1 cut(s)	44
SsiI	CCGC	1 cut(s)	15
SspI	AATATT	1 cut(s)	744
SspMI	CTAG	2 cut(s)	204, 1343
StuI	AGGCCT	1 cut(s)	44
StyD4I	CCNGG	7 cut(s)	158, 414, 716, 1033, 1062, 1231, 1311
StyI	CCWWGG	2 cut(s)	246, 1342
TaaI	ACNGT	3 cut(s)	177, 1292, 1321
TaiI	ACGT	2 cut(s)	586, 1090
TaqI	TCGA	5 cut(s)	81, 965, 1022, 1350, 1383
TatI	WGTACW	2 cut(s)	364, 1321
TauI	GCSGC	1 cut(s)	17
TfiI	GAWTC	1 cut(s)	794
Tru1I	TTAA	5 cut(s)	459, 519, 530, 854, 1206
Tru9I	TTAA	5 cut(s)	459, 519, 530, 854, 1206
TscAI	CASTG	4 cut(s)	340, 583, 1154, 1301
TseFI	GTSAC	2 cut(s)	342, 1253
Tsp45I	GTSAC	2 cut(s)	342, 1253
TspDTI	ATGAA	1 cut(s)	629
TspGWI	ACGGA	1 cut(s)	830
TspRI	CASTG	4 cut(s)	340, 583, 1154, 1301
Van91I	CCANNNNNTGG	3 cut(s)	788, 931, 955
VspI	ATTAAT	1 cut(s)	1206
XceI	RCATGY	2 cut(s)	203, 446
XmaJI	CCTAGG	1 cut(s)	1342
XmiI	GTMKAC	1 cut(s)	1350
XspI	CTAG	2 cut(s)	204, 1343
ZraI	GACGTC	1 cut(s)	584
ZrmI	AGTACT	1 cut(s)	1323
Zsp2I	ATGCAT	1 cut(s)	397

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.