Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005325.1

Orthogroup ID

OG0000314

Physical Location & Seq

Genomic Coordinates Reverse (-)

19676 .. 22103

Gene Structure 2428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005325.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

atggccagtttgatcgcaaaaacagagcagaggtttcgcgattgggaccaacaaattgagcagaacgctcgagaagctagagaacaattccataagcctttcttgagcagcgacaaacagaccactcaacatgccgcgaacatcacatctgaggaaggttccagcttggctaattcgcagcaaggcgaattcaaacgtcaaaaacctgcacgcaaagaggttgtttctaagactgacttgcctataggtggcaatcagcctaatggcctcactggtgaatcacatccttacatagaggctacttatggagaagaggatcaacaagattgttcttctgatatgaaaattgtctctgaacagatagctgatttctccactgatcaagccaaatacgtggctattgatcagatgcatgaggggcaagatgcagcccatgttgattccctagagcaacagaagcagatgcataatcaatttaattgtgactctgctgctggacgtgatcatgatcatgatcatgcagaggaccaattaagaaatggccaacttaattataaattaagttgttatcttgagaagccaatttgtggctttattaataaagtcaacttgaagttcttcaagtatacttcaaggccaggcggtggctttgatatacatggaggatacatttgcaacccaccttgcatgaatggccagaacaattattctagtggccaaattgtccttcgcgactgtaaatttgagtatcatcaatacaagttaactcttgtttacaattattcagcaagtgaagctcttgatgtggagaatttagaccaacaagtggtcaaatatgatagccaatctgtggcttattctagagaggccatgttctatgacatggtggttggcgaccaaaccgatcttggaacactgtcatctccaaaattgctattgaagatcatgcttcgccaaccaacaaggatacttgggggtcaagattatccttctcacgagccaaattcctccaaattcttcaacgcgaagtatctttgttcttttcctacaagctctcacaggagggatttttaccttacaaattttgatacatcggagcttgaagtgaagcatagatggcctcccccgtggtcttctagaggcctgtgcgcatacgaaggaattcgacgcccgcaaaatatgcaggagtacaagtcctttaaagctcttgatatggagaacttagaccagcaagtggtcgtaaggggggcttcggaaacttttttcagctttgccctcgcaggaaaggctgagctcaagggaaatgtaagagccaccaccgtaaccaccacctctgtcggaagtagttttcatgttgccaaagatgtcctcaccgtgcatgggaaacagtggaatggttttaatctcctggtgatcttcttctcattgttccatgatggatccaccaacatcagcagaactagttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004652 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006276 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0034641 GO:0043170 GO:0043412 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070566 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

488

Amino Acids

55.28

Weight (kDa)

5.95

Isoelectric Point (pI)

45.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000314)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02272 FvH4_1g22661 FvH4_2g10242 FvH4_2g34051 FvH4_3g19221 FvH4_3g29651 FvH4_3g30891 FvH4_4g11061 FvH4_5g09250 FvH4_5g15302 FvH4_5g15303 FvH4_5g15304 FvH4_5g28521 FvH4_6g23591 FvH4_7g05710 FvH4_7g19520
pyrus_communis	pycom07g06330
rosa_chinensis	RchiOBHm_Chr5g0027301 RchiOBHm_Chr6g0251451 RchiOBHm_Chr6g0274861
rosa_laevigata	RLG00000007850
rosa_multiflora	Rmu_co8230721.1_g000001 Rmu_sc0000271.1_g000027 Rmu_sc0000303.1_g000024 Rmu_sc0000368.1_g000024 Rmu_sc0000621.1_g000037 Rmu_sc0000693.1_g000081 Rmu_sc0001229.1_g000006 Rmu_sc0001373.1_g000003 Rmu_sc0001459.1_g000001 Rmu_sc0001744.1_g000002 Rmu_sc0001909.1_g000002 Rmu_sc0002053.1_g000012 Rmu_sc0002060.1_g000015 Rmu_sc0002119.1_g000036 Rmu_sc0002177.1_g000007 Rmu_sc0002822.1_g000024 Rmu_sc0002965.1_g000015 Rmu_sc0003363.1_g000051 Rmu_sc0003500.1_g000013 Rmu_sc0004191.1_g000020 Rmu_sc0004904.1_g000032 Rmu_sc0005325.1_g000008 Rmu_sc0005947.1_g000040 Rmu_sc0006475.1_g000001 Rmu_sc0006522.1_g000019 Rmu_sc0007102.1_g000005 Rmu_sc0007810.1_g000003 Rmu_sc0008339.1_g000025 Rmu_sc0008698.1_g000004 Rmu_sc0009313.1_g000006 Rmu_sc0009850.1_g000006 Rmu_sc0010598.1_g000003 Rmu_sc0011162.1_g000002 Rmu_sc0011824.1_g000004 Rmu_sc0011900.1_g000010 Rmu_sc0012291.1_g000006 Rmu_sc0012619.1_g000003 Rmu_sc0014679.1_g000001 Rmu_sc0019053.1_g000001 Rmu_sc0021462.1_g000003 Rmu_sc0024172.1_g000001 Rmu_sc0024173.1_g000001 Rmu_ssc0000052.1_g000016 Rmu_ssc0000392.1_g000010 Rmu_ssc0000421.1_g000062 Rmu_ssc0000479.1_g000006
rosa_roxburghii	Rroxscaffold_153G00436600 Rroxscaffold_1G00008580 Rroxscaffold_1G00016770 Rroxscaffold_1G00029550 Rroxscaffold_1G00036450 Rroxscaffold_1G00040410 Rroxscaffold_1G00047110 Rroxscaffold_1G00060570 Rroxscaffold_2G00081500 Rroxscaffold_2G00081510 Rroxscaffold_2G00086080 Rroxscaffold_2G00099620 Rroxscaffold_2G00099630 Rroxscaffold_2G00099640 Rroxscaffold_2G00109170 Rroxscaffold_2G00127750 Rroxscaffold_2G00128590 Rroxscaffold_2G00130780 Rroxscaffold_2G00131040 Rroxscaffold_2G00143160 Rroxscaffold_3G00229280 Rroxscaffold_3G00229290 Rroxscaffold_3G00229970 Rroxscaffold_3G00242860 Rroxscaffold_3G00242890 Rroxscaffold_3G00242900 Rroxscaffold_3G00248200 Rroxscaffold_4G00284550 Rroxscaffold_4G00288780 Rroxscaffold_4G00298620 Rroxscaffold_4G00298630 Rroxscaffold_4G00312420 Rroxscaffold_4G00320310 Rroxscaffold_4G00322220 Rroxscaffold_4G00323600 Rroxscaffold_4G00331830 Rroxscaffold_4G00332010 Rroxscaffold_4G00332020 Rroxscaffold_5G00344470 Rroxscaffold_5G00345310 Rroxscaffold_5G00356120 Rroxscaffold_5G00368700 Rroxscaffold_5G00379820 Rroxscaffold_5G00382480 Rroxscaffold_6G00395080 Rroxscaffold_6G00405520 Rroxscaffold_6G00428210 Rroxscaffold_7G00193460
rosa_samantha	Rh7CG413200 Rh7DG284900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	555
Acc16I	TGCGCA	1 cut(s)	1150
Acc36I	ACCTGC	1 cut(s)	214
AccB7I	CCANNNNNTGG	5 cut(s)	587, 644, 826, 850, 1234
AccI	GTMKAC	1 cut(s)	626
AccII	CGCG	4 cut(s)	39, 137, 732, 1025
AciI	CCGC	3 cut(s)	135, 642, 1172
AclWI	GGATC	3 cut(s)	324, 1434, 1447
AcoI	YGGCCR	4 cut(s)	3, 541, 694, 715
AcsI	RAATTY	7 cut(s)	188, 740, 811, 1003, 1013, 1081, 1161
AcyI	GRCGYC	1 cut(s)	1168
AfaI	GTAC	1 cut(s)	1190
AfiI	CCNNNNNNNGG	7 cut(s)	248, 587, 644, 826, 850, 1234, 1380
AgsI	TTSAA	7 cut(s)	193, 613, 622, 633, 940, 1021, 1103
AhlI	ACTAGT	1 cut(s)	1460
AjiI	CACGTC	1 cut(s)	500
AjnI	CCWGG	2 cut(s)	637, 1407
AjuI	GAANNNNNNNTTGG	2 cut(s)	711, 743
AluBI	AGCT	9 cut(s)	77, 165, 365, 797, 1053, 1099, 1205, 1269, 1294
AluI	AGCT	9 cut(s)	77, 165, 365, 797, 1053, 1099, 1205, 1269, 1294
Alw21I	GWGCWC	1 cut(s)	1296
Alw26I	GTCTC	1 cut(s)	355
AlwI	GGATC	3 cut(s)	324, 1434, 1447
Ama87I	CYCGRG	1 cut(s)	69
AoxI	GGCC	9 cut(s)	3, 265, 541, 635, 694, 715, 867, 1118, 1141
ApeKI	GCWGC	4 cut(s)	108, 178, 428, 491
ApoI	RAATTY	7 cut(s)	188, 740, 811, 1003, 1013, 1081, 1161
ArsI	GACNNNNNNTTYG	2 cut(s)	725, 757
AseI	ATTAAT	1 cut(s)	597
Asp700I	GAANNNNTTC	2 cut(s)	617, 1161
AspLEI	GCGC	1 cut(s)	1151
AspS9I	GGNCC	2 cut(s)	46, 526
AsuHPI	GGTGA	3 cut(s)	287, 1363, 1423
AvaI	CYCGRG	1 cut(s)	69
AvaII	GGWCC	2 cut(s)	46, 526
BalI	TGGCCA	4 cut(s)	5, 543, 696, 717
BamHI	GGATCC	1 cut(s)	1439
BanII	GRGCYC	1 cut(s)	1296
BauI	CACGAG	1 cut(s)	995
BbsI	GAAGAC	1 cut(s)	1125
Bbv12I	GWGCWC	1 cut(s)	1296
BbvI	GCAGC	4 cut(s)	120, 190, 440, 478
BccI	CCATC	2 cut(s)	1110, 1430
BcgI	CGANNNNNNTGC	4 cut(s)	17, 50, 51, 84
BciT130I	CCWGG	2 cut(s)	639, 1409
BciVI	GTATCC	2 cut(s)	659, 960
BclI	TGATCA	5 cut(s)	379, 403, 502, 508, 514
BcoDI	GTCTC	1 cut(s)	355
BcuI	ACTAGT	1 cut(s)	1460
BfaI	CTAG	6 cut(s)	78, 446, 711, 861, 1137, 1461
BfmI	CTRYAG	1 cut(s)	243
BfuAI	ACCTGC	1 cut(s)	214
BfuI	GTATCC	2 cut(s)	659, 960
BisI	GCNGC	5 cut(s)	109, 135, 179, 429, 492
BlpI	GCTNAGC	1 cut(s)	1290
BlsI	GCNGC	5 cut(s)	110, 136, 180, 430, 493
Bme1390I	CCNGG	2 cut(s)	639, 1409
Bme18I	GGWCC	2 cut(s)	46, 526
BmeT110I	CYCGRG	1 cut(s)	69
BmgBI	CACGTC	1 cut(s)	500
BmgT120I	GGNCC	2 cut(s)	46, 526
BmiI	GGNNCC	3 cut(s)	47, 160, 1441
BmrFI	CCNGG	2 cut(s)	639, 1409
BmsI	GCATC	3 cut(s)	399, 415, 453
BpiI	GAAGAC	1 cut(s)	1125
Bpu1102I	GCTNAGC	1 cut(s)	1290
BpuEI	CTTGAG	3 cut(s)	124, 593, 1280
BsaAI	YACGTR	1 cut(s)	394
BsaBI	GATNNNNATC	2 cut(s)	507, 513
BsaHI	GRCGYC	1 cut(s)	1168
BsaJI	CCNNGG	1 cut(s)	1127
BsaXI	ACNNNNNCTCC	2 cut(s)	1178, 1208
Bsc4I	CCNNNNNNNGG	7 cut(s)	248, 587, 644, 826, 850, 1234, 1380
Bse1I	ACTGG	2 cut(s)	6, 277
Bse8I	GATNNNNATC	2 cut(s)	507, 513
BseBI	CCWGG	2 cut(s)	639, 1409
BseDI	CCNNGG	1 cut(s)	1127
BseGI	GGATG	1 cut(s)	283
BseJI	GATNNNNATC	2 cut(s)	507, 513
BseLI	CCNNNNNNNGG	7 cut(s)	248, 587, 644, 826, 850, 1234, 1380
BseMII	CTCAG	2 cut(s)	141, 1281
BseNI	ACTGG	2 cut(s)	6, 277
BseXI	GCAGC	4 cut(s)	120, 190, 440, 478
BsgI	GTGCAG	1 cut(s)	192
Bsh1236I	CGCG	4 cut(s)	39, 137, 732, 1025
BshFI	GGCC	9 cut(s)	5, 267, 543, 637, 696, 717, 869, 1120, 1143
BsiHKAI	GWGCWC	1 cut(s)	1296
BsiHKCI	CYCGRG	1 cut(s)	69
BslFI	GGGAC	1 cut(s)	59
BslI	CCNNNNNNNGG	7 cut(s)	248, 587, 644, 826, 850, 1234, 1380
BsmAI	GTCTC	1 cut(s)	355
BsmFI	GGGAC	1 cut(s)	59
BsnI	GGCC	9 cut(s)	5, 267, 543, 637, 696, 717, 869, 1120, 1143
BsoBI	CYCGRG	1 cut(s)	69
Bsp1286I	GDGCHC	1 cut(s)	1296
Bsp1720I	GCTNAGC	1 cut(s)	1290
Bsp68I	TCGCGA	2 cut(s)	39, 732
BspACI	CCGC	3 cut(s)	135, 642, 1172
BspANI	GGCC	9 cut(s)	5, 267, 543, 637, 696, 717, 869, 1120, 1143
BspCNI	CTCAG	2 cut(s)	142, 1282
BspFNI	CGCG	4 cut(s)	39, 137, 732, 1025
BspHI	TCATGA	2 cut(s)	505, 511
BspLI	GGNNCC	3 cut(s)	47, 160, 1441
BspMI	ACCTGC	1 cut(s)	214
BspPI	GGATC	3 cut(s)	324, 1434, 1447
BsrI	ACTGG	2 cut(s)	6, 277
BssECI	CCNNGG	1 cut(s)	1127
BssNAI	GTATAC	1 cut(s)	627
BssNI	GRCGYC	1 cut(s)	1168
BssSI	CACGAG	1 cut(s)	995
Bst1107I	GTATAC	1 cut(s)	627
Bst2BI	CACGAG	1 cut(s)	995
Bst2UI	CCWGG	2 cut(s)	639, 1409
Bst4CI	ACNGT	5 cut(s)	737, 918, 1321, 1375, 1389
Bst6I	CTCTTC	1 cut(s)	306
BstACI	GRCGYC	1 cut(s)	1168
BstAPI	GCANNNNNTGC	1 cut(s)	1180
BstBAI	YACGTR	1 cut(s)	394
BstC8I	GCNNGC	2 cut(s)	211, 1172
BstDEI	CTNAG	4 cut(s)	150, 228, 1222, 1290
BstDSI	CCRYGG	1 cut(s)	1127
BstF5I	GGATG	1 cut(s)	283
BstFNI	CGCG	4 cut(s)	39, 137, 732, 1025
BstHHI	GCGC	1 cut(s)	1151
BstMAI	GTCTC	1 cut(s)	355
BstMWI	GCNNNNNNNGC	8 cut(s)	74, 418, 457, 693, 794, 1117, 1180, 1286
BstNI	CCWGG	2 cut(s)	639, 1409
BstNSI	RCATGY	1 cut(s)	134
BstSCI	CCNGG	2 cut(s)	637, 1407
BstSFI	CTRYAG	1 cut(s)	243
BstUI	CGCG	4 cut(s)	39, 137, 732, 1025
BstV1I	GCAGC	4 cut(s)	120, 190, 440, 478
BstV2I	GAAGAC	1 cut(s)	1125
BstX2I	RGATCY	1 cut(s)	1439
BstXI	CCANNNNNNTGG	1 cut(s)	394
BstYI	RGATCY	1 cut(s)	1439
BstZ17I	GTATAC	1 cut(s)	627
BsuI	GTATCC	2 cut(s)	659, 960
BsuRI	GGCC	9 cut(s)	5, 267, 543, 637, 696, 717, 869, 1120, 1143
BtgI	CCRYGG	1 cut(s)	1127
BtrI	CACGTC	1 cut(s)	500
BtsCI	GGATG	1 cut(s)	283
BtsIMutI	CAGTG	4 cut(s)	270, 375, 914, 1394
BtuMI	TCGCGA	2 cut(s)	39, 732
BveI	ACCTGC	1 cut(s)	214
Cac8I	GCNNGC	2 cut(s)	211, 1172
CciI	TCATGA	2 cut(s)	505, 511
CfoI	GCGC	1 cut(s)	1151
Cfr13I	GGNCC	2 cut(s)	46, 526
CseI	GACGC	1 cut(s)	1176
Csp6I	GTAC	1 cut(s)	1189
CviQI	GTAC	1 cut(s)	1189
DdeI	CTNAG	4 cut(s)	150, 228, 1222, 1290
DraI	TTTAAA	1 cut(s)	1201
EaeI	YGGCCR	4 cut(s)	3, 541, 694, 715
Eam1104I	CTCTTC	1 cut(s)	306
EarI	CTCTTC	1 cut(s)	306
Ecl136II	GAGCTC	1 cut(s)	1294
Eco147I	AGGCCT	1 cut(s)	1143
Eco24I	GRGCYC	1 cut(s)	1296
Eco47I	GGWCC	2 cut(s)	46, 526
Eco53kI	GAGCTC	1 cut(s)	1294
Eco88I	CYCGRG	1 cut(s)	69
EcoICRI	GAGCTC	1 cut(s)	1294
EcoRI	GAATTC	2 cut(s)	188, 1161
EcoRII	CCWGG	2 cut(s)	637, 1407
EcoT22I	ATGCAT	2 cut(s)	414, 468
EcoT38I	GRGCYC	1 cut(s)	1296
FalI	AAGNNNNNCTT	6 cut(s)	86, 118, 221, 253, 1234, 1266
FaqI	GGGAC	1 cut(s)	59
FauI	CCCGC	1 cut(s)	1179
FbaI	TGATCA	5 cut(s)	379, 403, 502, 508, 514
FblI	GTMKAC	1 cut(s)	626
Fnu4HI	GCNGC	5 cut(s)	109, 135, 179, 429, 492
FokI	GGATG	1 cut(s)	270
FriOI	GRGCYC	1 cut(s)	1296
Fsp4HI	GCNGC	5 cut(s)	109, 135, 179, 429, 492
FspAI	RTGCGCAY	1 cut(s)	1150
FspBI	CTAG	6 cut(s)	78, 446, 711, 861, 1137, 1461
FspI	TGCGCA	1 cut(s)	1150
GlaI	GCGC	1 cut(s)	1150
GluI	GCNGC	5 cut(s)	109, 135, 179, 429, 492
HaeIII	GGCC	9 cut(s)	5, 267, 543, 637, 696, 717, 869, 1120, 1143
HgaI	GACGC	1 cut(s)	1176
HhaI	GCGC	1 cut(s)	1151
Hin1I	GRCGYC	1 cut(s)	1168
Hin6I	GCGC	1 cut(s)	1149
HinP1I	GCGC	1 cut(s)	1149
HincII	GTYRAC	2 cut(s)	607, 765
HindII	GTYRAC	2 cut(s)	607, 765
HinfI	GANTC	3 cut(s)	278, 440, 485
HpaI	GTTAAC	1 cut(s)	765
HphI	GGTGA	3 cut(s)	287, 1363, 1423
Hpy166II	GTNNAC	4 cut(s)	607, 627, 765, 775
Hpy188I	TCNGA	7 cut(s)	151, 337, 355, 408, 1096, 1255, 1340
Hpy8I	GTNNAC	4 cut(s)	607, 627, 765, 775
Hpy99I	CGWCG	1 cut(s)	1170
HpyAV	CCTTC	4 cut(s)	149, 737, 999, 1151
HpyCH4III	ACNGT	5 cut(s)	737, 918, 1321, 1375, 1389
HpyCH4IV	ACGT	3 cut(s)	196, 393, 499
HpyCH4V	TGCA	9 cut(s)	209, 412, 428, 466, 521, 675, 687, 1183, 1378
HpyF10VI	GCNNNNNNNGC	8 cut(s)	74, 418, 457, 693, 794, 1117, 1180, 1286
HpyF3I	CTNAG	4 cut(s)	150, 228, 1222, 1290
HpySE526I	ACGT	3 cut(s)	196, 393, 499
Hsp92I	GRCGYC	1 cut(s)	1168
HspAI	GCGC	1 cut(s)	1149
Ksp22I	TGATCA	5 cut(s)	379, 403, 502, 508, 514
KspAI	GTTAAC	1 cut(s)	765
LmnI	GCTCC	1 cut(s)	1096
Lsp1109I	GCAGC	4 cut(s)	120, 190, 440, 478
LweI	GCATC	3 cut(s)	399, 415, 453
MaeI	CTAG	6 cut(s)	78, 446, 711, 861, 1137, 1461
MaeII	ACGT	3 cut(s)	196, 393, 499
MaeIII	GTNAC	2 cut(s)	482, 1321
MboII	GAAGA	8 cut(s)	323, 324, 610, 952, 1009, 1125, 1408, 1411
MflI	RGATCY	1 cut(s)	1439
MhlI	GDGCHC	1 cut(s)	1296
MlsI	TGGCCA	4 cut(s)	5, 543, 696, 717
MluNI	TGGCCA	4 cut(s)	5, 543, 696, 717
MlyI	GAGTC	1 cut(s)	479
MmeI	TCCRAC	1 cut(s)	1318
Mox20I	TGGCCA	4 cut(s)	5, 543, 696, 717
Mph1103I	ATGCAT	2 cut(s)	414, 468
MroXI	GAANNNNTTC	2 cut(s)	617, 1161
MscI	TGGCCA	4 cut(s)	5, 543, 696, 717
MseI	TTAA	8 cut(s)	477, 533, 549, 560, 597, 764, 1200, 1401
MslI	CAYNNNNRTG	2 cut(s)	510, 516
Msp20I	TGGCCA	4 cut(s)	5, 543, 696, 717
MspR9I	CCNGG	2 cut(s)	639, 1409
MvaI	CCWGG	2 cut(s)	639, 1409
MvnI	CGCG	4 cut(s)	39, 137, 732, 1025
MwoI	GCNNNNNNNGC	8 cut(s)	74, 418, 457, 693, 794, 1117, 1180, 1286
NlaIV	GGNNCC	3 cut(s)	47, 160, 1441
NmuCI	GTSAC	1 cut(s)	482
NruI	TCGCGA	2 cut(s)	39, 732
NsbI	TGCGCA	1 cut(s)	1150
NsiI	ATGCAT	2 cut(s)	414, 468
NspI	RCATGY	1 cut(s)	134
PaeR7I	CTCGAG	1 cut(s)	69
PagI	TCATGA	2 cut(s)	505, 511
PceI	AGGCCT	1 cut(s)	1143
PdmI	GAANNNNTTC	2 cut(s)	617, 1161
PfeI	GAWTC	2 cut(s)	278, 440
PflMI	CCANNNNNTGG	5 cut(s)	587, 644, 826, 850, 1234
PkrI	GCNGC	5 cut(s)	110, 136, 180, 430, 493
PleI	GAGTC	1 cut(s)	479
PpsI	GAGTC	1 cut(s)	479
Ppu21I	YACGTR	1 cut(s)	394
PshBI	ATTAAT	1 cut(s)	597
PsiI	TTATAA	1 cut(s)	555
Psp124BI	GAGCTC	1 cut(s)	1296
Psp6I	CCWGG	2 cut(s)	637, 1407
PspGI	CCWGG	2 cut(s)	637, 1407
PspN4I	GGNNCC	3 cut(s)	47, 160, 1441
PspPI	GGNCC	2 cut(s)	46, 526
PsuI	RGATCY	1 cut(s)	1439
RruI	TCGCGA	2 cut(s)	39, 732
RsaI	GTAC	1 cut(s)	1190
RsaNI	GTAC	1 cut(s)	1189
RseI	CAYNNNNRTG	2 cut(s)	510, 516
SacI	GAGCTC	1 cut(s)	1296
SaqAI	TTAA	8 cut(s)	477, 533, 549, 560, 597, 764, 1200, 1401
SatI	GCNGC	5 cut(s)	109, 135, 179, 429, 492
Sau96I	GGNCC	2 cut(s)	46, 526
SchI	GAGTC	1 cut(s)	479
ScrFI	CCNGG	2 cut(s)	639, 1409
SduI	GDGCHC	1 cut(s)	1296
SfaNI	GCATC	3 cut(s)	399, 415, 453
SfcI	CTRYAG	1 cut(s)	243
Sfr274I	CTCGAG	1 cut(s)	69
SinI	GGWCC	2 cut(s)	46, 526
SlaI	CTCGAG	1 cut(s)	69
SmiMI	CAYNNNNRTG	2 cut(s)	510, 516
SmlI	CTYRAG	4 cut(s)	69, 103, 572, 1295
SmoI	CTYRAG	4 cut(s)	69, 103, 572, 1295
SpeI	ACTAGT	1 cut(s)	1460
SseBI	AGGCCT	1 cut(s)	1143
SsiI	CCGC	3 cut(s)	135, 642, 1172
SspMI	CTAG	6 cut(s)	78, 446, 711, 861, 1137, 1461
SstI	GAGCTC	1 cut(s)	1296
StuI	AGGCCT	1 cut(s)	1143
StyD4I	CCNGG	2 cut(s)	637, 1407
TaaI	ACNGT	5 cut(s)	737, 918, 1321, 1375, 1389
TaiI	ACGT	3 cut(s)	199, 396, 502
TaqI	TCGA	2 cut(s)	70, 1165
TatI	WGTACW	1 cut(s)	1188
TauI	GCSGC	1 cut(s)	137
TfiI	GAWTC	2 cut(s)	278, 440
Tru1I	TTAA	8 cut(s)	477, 533, 549, 560, 597, 764, 1200, 1401
Tru9I	TTAA	8 cut(s)	477, 533, 549, 560, 597, 764, 1200, 1401
TscAI	CASTG	4 cut(s)	277, 382, 921, 1394
TseFI	GTSAC	1 cut(s)	482
TseI	GCWGC	4 cut(s)	108, 178, 428, 491
Tsp45I	GTSAC	1 cut(s)	482
TspDTI	ATGAA	3 cut(s)	356, 704, 1340
TspRI	CASTG	4 cut(s)	277, 382, 921, 1394
Van91I	CCANNNNNTGG	5 cut(s)	587, 644, 826, 850, 1234
VpaK11BI	GGWCC	2 cut(s)	46, 526
VspI	ATTAAT	1 cut(s)	597
XapI	RAATTY	7 cut(s)	188, 740, 811, 1003, 1013, 1081, 1161
XbaI	TCTAGA	2 cut(s)	860, 1136
XceI	RCATGY	1 cut(s)	134
XcmI	CCANNNNNNNNNTGG	2 cut(s)	536, 905
XhoI	CTCGAG	1 cut(s)	69
XmiI	GTMKAC	1 cut(s)	626
XmnI	GAANNNNTTC	2 cut(s)	617, 1161
XspI	CTAG	6 cut(s)	78, 446, 711, 861, 1137, 1461
Zsp2I	ATGCAT	2 cut(s)	414, 468

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.