Rmu_sc0006475.1_g000001

Blue copper

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006475.1
OG0000314
Physical Location & Seq
Forward (+)
1143 .. 4733
3591 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006475.1_g000001.1.cds

Sequence Viewer

Length: 1860 bp
atggcctatttccagctcttcaccatccttgccatattagcaattttttccccatcaatttcggccaaaaattatgttgttggggacgaacaaggctggaccgttgaaattgactatgaagcttgggctaagggaaagcaattttatgttggtgacaaccttattttcaagtatctaccaggagttcacaatgtggttgaagtgaaggaaaaagagtttaaggagtgtgcagctccttctagcaccaagccattaacaactggagaggatttgatcaagcttgcaaccccaggaaagaaatggttcatttgtagtgttggtaagcattgtgaattggggaaccagaaggttgctgtaactgttttgtcatcaccttcctcttctcctagctcaatcccaagcagctcaagtccaaatgctgccccaagtccgagtacctcaagcctaacttccccaggcccagatgcctcaagccagagtgcacgaagcccaagtatctcaagcccgagtggaccaagcccaagtacctcaagcccgagtacctcagcggcaaccgtcggaaagatatatgggtggctggtaattgttagtggcattgtaggtcctagtctctccaagagccgactgtctgcttcaccagatcaatccggcgaccgtgcttccagtcctagtctcctcgcgagccgactgccagtactactgccaccgatacaaccagcgaagcaagggcaaaagtctttttccgaaaggttagagaagaaccttgtgacgaggttggtgctctcctcatccacagtgcttgaagaagaagccaggtcaagggactaccccaacgactgcaccccgcggtgctggcacgcctgcgcaatcactcgctcaaaagagacagtttgcacaccagctggttttggagccaaacatgcttcaaggccaagcggtggctttgatatatgtggaggatacatctgcgacccaccttgcaagaagggccagaataattattctagtggccaatttgtccttcgcggctgtaagttggagtatcgtcaatacaagttaactcttgtttacagttattcaaatttcatgcaaaaggaatttttctatgatgatactaaacagtccattgaggcttctcaatatgatgcctggaaggaaaatagaggcacacaaatatttgatatgcctatttttgaagaagagattgattcaccaattttcgctgattctaaatatgatctcaacatggagccaatatatgatgagtatgatgataattgtaatttaattattggttccaataatcatatacagcagttcaaattccttgaacaagtggttaaatgcaaaagccaatttgtggcttattctgaagacaccatgttctatgacatggtagttggcgacaaagccgattttgggacatcttcatctccaaaactgcaattgaagatcatgcttcgtcaaccaacaaagatacttggggggcaatatcactcctcctatgagccaaatttctttcaagtttttgacgcgaaatatctttcgagcactcgcgaggaacattgtctcaagaagcagagctcgctgaatacaggtggcctgagcctcgctagcgaagttcgatccggcgaagcgcttggcagaacttcctccaataagatgtgcacacaagggcgaagtcgatctgaggccagcgagtgggtttttgatggacagcatgccagttacagtggcagacgtcaaggcagggacgagagggaggttttcgatgccacagcagtttcagggagaggttaccccgtcggcgaggagaggcaaaatcgaactgcaggagaagacatattgaatccagattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu_bind_like

Protein Analysis

619

Amino Acids

67.95

Weight (kDa)

6.32

Isoelectric Point (pI)

62.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000314)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02272 FvH4_1g22661 FvH4_2g10242 FvH4_2g34051 FvH4_3g19221 FvH4_3g29651 FvH4_3g30891 FvH4_4g11061 FvH4_5g09250 FvH4_5g15302 FvH4_5g15303 FvH4_5g15304 FvH4_5g28521 FvH4_6g23591 FvH4_7g05710 FvH4_7g19520
pyrus_communis pycom07g06330
rosa_chinensis RchiOBHm_Chr5g0027301 RchiOBHm_Chr6g0251451 RchiOBHm_Chr6g0274861
rosa_laevigata RLG00000007850
rosa_multiflora Rmu_co8230721.1_g000001 Rmu_sc0000271.1_g000027 Rmu_sc0000303.1_g000024 Rmu_sc0000368.1_g000024 Rmu_sc0000621.1_g000037 Rmu_sc0000693.1_g000081 Rmu_sc0001229.1_g000006 Rmu_sc0001373.1_g000003 Rmu_sc0001459.1_g000001 Rmu_sc0001744.1_g000002 Rmu_sc0001909.1_g000002 Rmu_sc0002053.1_g000012 Rmu_sc0002060.1_g000015 Rmu_sc0002119.1_g000036 Rmu_sc0002177.1_g000007 Rmu_sc0002822.1_g000024 Rmu_sc0002965.1_g000015 Rmu_sc0003363.1_g000051 Rmu_sc0003500.1_g000013 Rmu_sc0004191.1_g000020 Rmu_sc0004904.1_g000032 Rmu_sc0005325.1_g000008 Rmu_sc0005947.1_g000040 Rmu_sc0006475.1_g000001 Rmu_sc0006522.1_g000019 Rmu_sc0007102.1_g000005 Rmu_sc0007810.1_g000003 Rmu_sc0008339.1_g000025 Rmu_sc0008698.1_g000004 Rmu_sc0009313.1_g000006 Rmu_sc0009850.1_g000006 Rmu_sc0010598.1_g000003 Rmu_sc0011162.1_g000002 Rmu_sc0011824.1_g000004 Rmu_sc0011900.1_g000010 Rmu_sc0012291.1_g000006 Rmu_sc0012619.1_g000003 Rmu_sc0014679.1_g000001 Rmu_sc0019053.1_g000001 Rmu_sc0021462.1_g000003 Rmu_sc0024172.1_g000001 Rmu_sc0024173.1_g000001 Rmu_ssc0000052.1_g000016 Rmu_ssc0000392.1_g000010 Rmu_ssc0000421.1_g000062 Rmu_ssc0000479.1_g000006
rosa_roxburghii Rroxscaffold_153G00436600 Rroxscaffold_1G00008580 Rroxscaffold_1G00016770 Rroxscaffold_1G00029550 Rroxscaffold_1G00036450 Rroxscaffold_1G00040410 Rroxscaffold_1G00047110 Rroxscaffold_1G00060570 Rroxscaffold_2G00081500 Rroxscaffold_2G00081510 Rroxscaffold_2G00086080 Rroxscaffold_2G00099620 Rroxscaffold_2G00099630 Rroxscaffold_2G00099640 Rroxscaffold_2G00109170 Rroxscaffold_2G00127750 Rroxscaffold_2G00128590 Rroxscaffold_2G00130780 Rroxscaffold_2G00131040 Rroxscaffold_2G00143160 Rroxscaffold_3G00229280 Rroxscaffold_3G00229290 Rroxscaffold_3G00229970 Rroxscaffold_3G00242860 Rroxscaffold_3G00242890 Rroxscaffold_3G00242900 Rroxscaffold_3G00248200 Rroxscaffold_4G00284550 Rroxscaffold_4G00288780 Rroxscaffold_4G00298620 Rroxscaffold_4G00298630 Rroxscaffold_4G00312420 Rroxscaffold_4G00320310 Rroxscaffold_4G00322220 Rroxscaffold_4G00323600 Rroxscaffold_4G00331830 Rroxscaffold_4G00332010 Rroxscaffold_4G00332020 Rroxscaffold_5G00344470 Rroxscaffold_5G00345310 Rroxscaffold_5G00356120 Rroxscaffold_5G00368700 Rroxscaffold_5G00379820 Rroxscaffold_5G00382480 Rroxscaffold_6G00395080 Rroxscaffold_6G00405520 Rroxscaffold_6G00428210 Rroxscaffold_7G00193460
rosa_samantha Rh7CG413200 Rh7DG284900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1744
Acc16I TGCGCA 1 cut(s) 865
AccB7I CCANNNNNTGG 3 cut(s) 938, 1360, 1701
AccII CGCG 5 cut(s) 680, 847, 1026, 1535, 1557
AciI CCGC 5 cut(s) 548, 845, 847, 936, 1026
AclWI GGATC 1 cut(s) 1620
AcoI YGGCCR 2 cut(s) 63, 1009
AcsI RAATTY 4 cut(s) 1081, 1097, 1322, 1513
AcuI CTGAAG 1 cut(s) 1392
AcyI GRCGYC 1 cut(s) 1741
AdeI CACNNNGTG 1 cut(s) 193
AfaI GTAC 4 cut(s) 436, 526, 541, 696
AfeI AGCGCT 1 cut(s) 1638
AfiI CCNNNNNNNGG 5 cut(s) 819, 938, 1360, 1419, 1701
AjnI CCWGG 5 cut(s) 178, 289, 454, 812, 1148
AjuI GAANNNNNNNTTGG 2 cut(s) 1005, 1037
AluBI AGCT 8 cut(s) 16, 122, 233, 280, 390, 405, 902, 1584
AluI AGCT 8 cut(s) 16, 122, 233, 280, 390, 405, 902, 1584
Alw21I GWGCWC 5 cut(s) 484, 783, 1553, 1586, 1670
Alw26I GTCTC 4 cut(s) 614, 677, 878, 1574
Alw44I GTGCAC 2 cut(s) 480, 1666
AlwI GGATC 1 cut(s) 1620
Ama87I CYCGRG 2 cut(s) 505, 535
Aor51HI AGCGCT 1 cut(s) 1638
AoxI GGCC 8 cut(s) 3, 63, 457, 929, 988, 1009, 1600, 1692
ApaLI GTGCAC 2 cut(s) 480, 1666
ApeKI GCWGC 3 cut(s) 230, 402, 419
ApoI RAATTY 4 cut(s) 1081, 1097, 1322, 1513
Asp700I GAANNNNTTC 1 cut(s) 302
AspLEI GCGC 2 cut(s) 866, 1639
AspS9I GGNCC 5 cut(s) 99, 458, 512, 602, 988
AsuHPI GGTGA 5 cut(s) 13, 164, 363, 627, 1203
AsuNHI GCTAGC 1 cut(s) 1613
AvaI CYCGRG 2 cut(s) 505, 535
AvaII GGWCC 3 cut(s) 99, 512, 602
BaeGI GKGCMC 2 cut(s) 484, 1670
BalI TGGCCA 1 cut(s) 1011
BanII GRGCYC 1 cut(s) 1586
BbsI GAAGAC 2 cut(s) 1380, 1845
Bbv12I GWGCWC 5 cut(s) 484, 783, 1553, 1586, 1670
BbvCI CCTCAGC 1 cut(s) 544
BbvI GCAGC 3 cut(s) 242, 406, 414
BccI CCATC 3 cut(s) 32, 61, 1706
BcgI CGANNNNNNTGC 4 cut(s) 670, 704, 760, 794
BciT130I CCWGG 5 cut(s) 180, 291, 456, 814, 1150
BciVI GTATCC 1 cut(s) 953
BclI TGATCA 1 cut(s) 273
BcoDI GTCTC 4 cut(s) 614, 677, 878, 1574
BfaI CTAG 6 cut(s) 240, 387, 606, 669, 1005, 1614
BfmI CTRYAG 1 cut(s) 1830
BfoI RGCGCY 1 cut(s) 1640
BfuI GTATCC 1 cut(s) 953
BisI GCNGC 5 cut(s) 231, 403, 420, 549, 1027
BlsI GCNGC 5 cut(s) 232, 404, 421, 550, 1028
BmcAI AGTACT 1 cut(s) 696
Bme1390I CCNGG 5 cut(s) 180, 291, 456, 814, 1150
Bme18I GGWCC 3 cut(s) 99, 512, 602
BmeT110I CYCGRG 2 cut(s) 505, 535
BmgT120I GGNCC 5 cut(s) 99, 458, 512, 602, 988
BmiI GGNNCC 4 cut(s) 341, 913, 1251, 1297
BmrFI CCNGG 5 cut(s) 180, 291, 456, 814, 1150
BmsI GCATC 3 cut(s) 454, 1135, 1762
BmtI GCTAGC 1 cut(s) 1617
BpiI GAAGAC 2 cut(s) 1380, 1845
BpmI CTGGAG 1 cut(s) 282
Bpu10I CCTNAGC 3 cut(s) 129, 544, 1604
BpuEI CTTGAG 6 cut(s) 391, 424, 454, 484, 514, 1556
BsaHI GRCGYC 1 cut(s) 1741
BsaJI CCNNGG 3 cut(s) 289, 454, 845
Bsc4I CCNNNNNNNGG 5 cut(s) 819, 938, 1360, 1419, 1701
Bse1I ACTGG 4 cut(s) 265, 663, 692, 1725
BseBI CCWGG 5 cut(s) 180, 291, 456, 814, 1150
BseDI CCNNGG 3 cut(s) 289, 454, 845
BseGI GGATG 2 cut(s) 24, 788
BseLI CCNNNNNNNGG 5 cut(s) 819, 938, 1360, 1419, 1701
BseMII CTCAG 3 cut(s) 558, 1595, 1680
BseNI ACTGG 4 cut(s) 265, 663, 692, 1725
BseRI GAGGAG 4 cut(s) 665, 775, 1489, 1826
BseSI GKGCMC 2 cut(s) 484, 1670
BseXI GCAGC 3 cut(s) 242, 406, 414
BsgI GTGCAG 2 cut(s) 249, 823
Bsh1236I CGCG 5 cut(s) 680, 847, 1026, 1535, 1557
Bsh1285I CGRYCG 1 cut(s) 655
BshFI GGCC 8 cut(s) 5, 65, 459, 931, 990, 1011, 1602, 1694
BsiEI CGRYCG 1 cut(s) 655
BsiHKAI GWGCWC 5 cut(s) 484, 783, 1553, 1586, 1670
BsiHKCI CYCGRG 2 cut(s) 505, 535
BsiSI CCGG 2 cut(s) 648, 1629
BslFI GGGAC 4 cut(s) 98, 836, 1435, 1766
BslI CCNNNNNNNGG 5 cut(s) 819, 938, 1360, 1419, 1701
BsmAI GTCTC 4 cut(s) 614, 677, 878, 1574
BsmFI GGGAC 4 cut(s) 98, 836, 1435, 1766
BsnI GGCC 8 cut(s) 5, 65, 459, 931, 990, 1011, 1602, 1694
BsoBI CYCGRG 2 cut(s) 505, 535
Bsp1286I GDGCHC 5 cut(s) 484, 783, 1553, 1586, 1670
Bsp143I GATC 6 cut(s) 273, 640, 1237, 1452, 1625, 1685
Bsp68I TCGCGA 2 cut(s) 680, 1557
BspACI CCGC 5 cut(s) 548, 845, 847, 936, 1026
BspANI GGCC 8 cut(s) 5, 65, 459, 931, 990, 1011, 1602, 1694
BspCNI CTCAG 3 cut(s) 557, 1596, 1681
BspFNI CGCG 5 cut(s) 680, 847, 1026, 1535, 1557
BspLI GGNNCC 4 cut(s) 341, 913, 1251, 1297
BspMAI CTGCAG 1 cut(s) 1834
BspOI GCTAGC 1 cut(s) 1617
BspPI GGATC 1 cut(s) 1620
BspQI GCTCTTC 1 cut(s) 23
BsrI ACTGG 4 cut(s) 265, 663, 692, 1725
BssECI CCNNGG 3 cut(s) 289, 454, 845
BssMI GATC 6 cut(s) 273, 640, 1237, 1452, 1625, 1685
BssNI GRCGYC 1 cut(s) 1741
Bst2UI CCWGG 5 cut(s) 180, 291, 456, 814, 1150
Bst6I CTCTTC 3 cut(s) 23, 385, 1194
BstACI GRCGYC 1 cut(s) 1741
BstC8I GCNNGC 9 cut(s) 282, 682, 854, 858, 862, 1586, 1615, 1696, 1722
BstDEI CTNAG 4 cut(s) 129, 544, 1604, 1689
BstDSI CCRYGG 1 cut(s) 845
BstEII GGTNACC 1 cut(s) 1796
BstF5I GGATG 2 cut(s) 24, 788
BstFNI CGCG 5 cut(s) 680, 847, 1026, 1535, 1557
BstH2I RGCGCY 1 cut(s) 1640
BstHHI GCGC 2 cut(s) 866, 1639
BstKTI GATC 6 cut(s) 276, 643, 1240, 1455, 1628, 1688
BstMAI GTCTC 4 cut(s) 614, 677, 878, 1574
BstMBI GATC 6 cut(s) 273, 640, 1237, 1452, 1625, 1685
BstMCI CGRYCG 1 cut(s) 655
BstMWI GCNNNNNNNGC 6 cut(s) 38, 853, 920, 987, 1585, 1614
BstNI CCWGG 5 cut(s) 180, 291, 456, 814, 1150
BstNSI RCATGY 2 cut(s) 923, 1724
BstPI GGTNACC 1 cut(s) 1796
BstSCI CCNGG 5 cut(s) 178, 289, 454, 812, 1148
BstSFI CTRYAG 1 cut(s) 1830
BstSLI GKGCMC 2 cut(s) 484, 1670
BstUI CGCG 5 cut(s) 680, 847, 1026, 1535, 1557
BstV1I GCAGC 3 cut(s) 242, 406, 414
BstV2I GAAGAC 2 cut(s) 1380, 1845
BsuI GTATCC 1 cut(s) 953
BsuRI GGCC 8 cut(s) 5, 65, 459, 931, 990, 1011, 1602, 1694
BtgI CCRYGG 1 cut(s) 845
BtsCI GGATG 2 cut(s) 24, 788
BtsIMutI CAGTG 2 cut(s) 801, 1738
BtuMI TCGCGA 2 cut(s) 680, 1557
Cac8I GCNNGC 9 cut(s) 282, 682, 854, 858, 862, 1586, 1615, 1696, 1722
CfoI GCGC 2 cut(s) 866, 1639
Cfr13I GGNCC 5 cut(s) 99, 458, 512, 602, 988
Cfr42I CCGCGG 1 cut(s) 848
CseI GACGC 1 cut(s) 1541
Csp6I GTAC 4 cut(s) 435, 525, 540, 695
CspCI CAANNNNNGTGG 2 cut(s) 781, 816
CviAII CATG 7 cut(s) 920, 1087, 1246, 1381, 1393, 1456, 1721
CviQI GTAC 4 cut(s) 435, 525, 540, 695
DdeI CTNAG 4 cut(s) 129, 544, 1604, 1689
DpnI GATC 6 cut(s) 275, 642, 1239, 1454, 1627, 1687
DpnII GATC 6 cut(s) 273, 640, 1237, 1452, 1625, 1685
DraIII CACNNNGTG 1 cut(s) 193
EaeI YGGCCR 2 cut(s) 63, 1009
Eam1104I CTCTTC 3 cut(s) 23, 385, 1194
EarI CTCTTC 3 cut(s) 23, 385, 1194
Ecl136II GAGCTC 1 cut(s) 1584
Eco24I GRGCYC 1 cut(s) 1586
Eco47I GGWCC 3 cut(s) 99, 512, 602
Eco47III AGCGCT 1 cut(s) 1638
Eco53kI GAGCTC 1 cut(s) 1584
Eco57I CTGAAG 1 cut(s) 1392
Eco88I CYCGRG 2 cut(s) 505, 535
Eco91I GGTNACC 1 cut(s) 1796
EcoICRI GAGCTC 1 cut(s) 1584
EcoO109I RGGNCCY 1 cut(s) 602
EcoO65I GGTNACC 1 cut(s) 1796
EcoRII CCWGG 5 cut(s) 178, 289, 454, 812, 1148
EcoT38I GRGCYC 1 cut(s) 1586
FaeI CATG 7 cut(s) 923, 1090, 1249, 1384, 1396, 1459, 1724
FalI AAGNNNNNCTT 2 cut(s) 433, 465
FaqI GGGAC 4 cut(s) 98, 836, 1435, 1766
FatI CATG 7 cut(s) 919, 1086, 1245, 1380, 1392, 1455, 1720
FauI CCCGC 1 cut(s) 852
FbaI TGATCA 1 cut(s) 273
Fnu4HI GCNGC 5 cut(s) 231, 403, 420, 549, 1027
FokI GGATG 2 cut(s) 11, 775
FriOI GRGCYC 1 cut(s) 1586
Fsp4HI GCNGC 5 cut(s) 231, 403, 420, 549, 1027
FspBI CTAG 6 cut(s) 240, 387, 606, 669, 1005, 1614
FspI TGCGCA 1 cut(s) 865
GlaI GCGC 2 cut(s) 865, 1638
GluI GCNGC 5 cut(s) 231, 403, 420, 549, 1027
GsuI CTGGAG 1 cut(s) 282
HaeII RGCGCY 1 cut(s) 1640
HaeIII GGCC 8 cut(s) 5, 65, 459, 931, 990, 1011, 1602, 1694
HapII CCGG 2 cut(s) 648, 1629
HgaI GACGC 1 cut(s) 1541
HhaI GCGC 2 cut(s) 866, 1639
Hin1I GRCGYC 1 cut(s) 1741
Hin1II CATG 7 cut(s) 923, 1090, 1249, 1384, 1396, 1459, 1724
Hin6I GCGC 2 cut(s) 864, 1637
HinP1I GCGC 2 cut(s) 864, 1637
HincII GTYRAC 2 cut(s) 1059, 1466
HindII GTYRAC 2 cut(s) 1059, 1466
HindIII AAGCTT 2 cut(s) 120, 278
HinfI GANTC 3 cut(s) 1208, 1226, 1849
HpaI GTTAAC 1 cut(s) 1059
HpaII CCGG 2 cut(s) 648, 1629
HphI GGTGA 5 cut(s) 13, 164, 363, 627, 1203
Hpy166II GTNNAC 7 cut(s) 187, 482, 512, 1059, 1069, 1466, 1668
Hpy188I TCNGA 5 cut(s) 432, 560, 745, 1372, 1690
Hpy188III TCNNGA 4 cut(s) 679, 1556, 1573, 1853
Hpy8I GTNNAC 7 cut(s) 187, 482, 512, 1059, 1069, 1466, 1668
Hpy99I CGWCG 2 cut(s) 560, 1808
HpyAV CCTTC 7 cut(s) 199, 246, 340, 384, 979, 1031, 1147
HpyCH4IV ACGT 1 cut(s) 1741
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 853, 920, 987, 1585, 1614
HpyF3I CTNAG 4 cut(s) 129, 544, 1604, 1689
HpySE526I ACGT 1 cut(s) 1741
Hsp92I GRCGYC 1 cut(s) 1741
Hsp92II CATG 7 cut(s) 923, 1090, 1249, 1384, 1396, 1459, 1724
HspAI GCGC 2 cut(s) 864, 1637
Ksp22I TGATCA 1 cut(s) 273
KspAI GTTAAC 1 cut(s) 1059
KspI CCGCGG 1 cut(s) 848
Kzo9I GATC 6 cut(s) 273, 640, 1237, 1452, 1625, 1685
LguI GCTCTTC 1 cut(s) 23
LmnI GCTCC 3 cut(s) 238, 911, 1249
Lsp1109I GCAGC 3 cut(s) 242, 406, 414
LweI GCATC 3 cut(s) 454, 1135, 1762
MaeI CTAG 6 cut(s) 240, 387, 606, 669, 1005, 1614
MaeII ACGT 1 cut(s) 1741
MaeIII GTNAC 5 cut(s) 152, 355, 766, 1727, 1796
MalI GATC 6 cut(s) 275, 642, 1239, 1454, 1627, 1687
MboI GATC 6 cut(s) 273, 640, 1237, 1452, 1625, 1685
MfeI CAATTG 1 cut(s) 1445
MhlI GDGCHC 5 cut(s) 484, 783, 1553, 1586, 1670
MlsI TGGCCA 1 cut(s) 1011
MluNI TGGCCA 1 cut(s) 1011
MmeI TCCRAC 2 cut(s) 538, 1017
Mox20I TGGCCA 1 cut(s) 1011
MroXI GAANNNNTTC 1 cut(s) 302
MscI TGGCCA 1 cut(s) 1011
MseI TTAA 6 cut(s) 219, 254, 1058, 1286, 1341, 1858
Msp20I TGGCCA 1 cut(s) 1011
MspA1I CMGCKG 3 cut(s) 548, 847, 902
MspI CCGG 2 cut(s) 648, 1629
MspR9I CCNGG 5 cut(s) 180, 291, 456, 814, 1150
MunI CAATTG 1 cut(s) 1445
MvaI CCWGG 5 cut(s) 180, 291, 456, 814, 1150
MvnI CGCG 5 cut(s) 680, 847, 1026, 1535, 1557
MwoI GCNNNNNNNGC 6 cut(s) 38, 853, 920, 987, 1585, 1614
NdeII GATC 6 cut(s) 273, 640, 1237, 1452, 1625, 1685
NheI GCTAGC 1 cut(s) 1613
NlaIII CATG 7 cut(s) 923, 1090, 1249, 1384, 1396, 1459, 1724
NlaIV GGNNCC 4 cut(s) 341, 913, 1251, 1297
NmuCI GTSAC 2 cut(s) 152, 766
NruI TCGCGA 2 cut(s) 680, 1557
NsbI TGCGCA 1 cut(s) 865
NspI RCATGY 2 cut(s) 923, 1724
PaeI GCATGC 1 cut(s) 1724
PciSI GCTCTTC 1 cut(s) 23
PdmI GAANNNNTTC 1 cut(s) 302
PfeI GAWTC 3 cut(s) 1208, 1226, 1849
PflMI CCANNNNNTGG 3 cut(s) 938, 1360, 1701
PkrI GCNGC 5 cut(s) 232, 404, 421, 550, 1028
PpuMI RGGWCCY 1 cut(s) 602
Psp124BI GAGCTC 1 cut(s) 1586
Psp5II RGGWCCY 1 cut(s) 602
Psp6I CCWGG 5 cut(s) 178, 289, 454, 812, 1148
PspEI GGTNACC 1 cut(s) 1796
PspGI CCWGG 5 cut(s) 178, 289, 454, 812, 1148
PspN4I GGNNCC 4 cut(s) 341, 913, 1251, 1297
PspPI GGNCC 5 cut(s) 99, 458, 512, 602, 988
PspPPI RGGWCCY 1 cut(s) 602
PstI CTGCAG 1 cut(s) 1834
PvuII CAGCTG 1 cut(s) 902
RruI TCGCGA 2 cut(s) 680, 1557
RsaI GTAC 4 cut(s) 436, 526, 541, 696
RsaNI GTAC 4 cut(s) 435, 525, 540, 695
SacI GAGCTC 1 cut(s) 1586
SacII CCGCGG 1 cut(s) 848
SapI GCTCTTC 1 cut(s) 23
SaqAI TTAA 6 cut(s) 219, 254, 1058, 1286, 1341, 1858
SatI GCNGC 5 cut(s) 231, 403, 420, 549, 1027
Sau3AI GATC 6 cut(s) 273, 640, 1237, 1452, 1625, 1685
Sau96I GGNCC 5 cut(s) 99, 458, 512, 602, 988
ScaI AGTACT 1 cut(s) 696
ScrFI CCNGG 5 cut(s) 180, 291, 456, 814, 1150
SduI GDGCHC 5 cut(s) 484, 783, 1553, 1586, 1670
SfaNI GCATC 3 cut(s) 454, 1135, 1762
SfcI CTRYAG 1 cut(s) 1830
Sfr303I CCGCGG 1 cut(s) 848
SgrBI CCGCGG 1 cut(s) 848
SinI GGWCC 3 cut(s) 99, 512, 602
SmlI CTYRAG 6 cut(s) 406, 439, 469, 499, 529, 1571
SmoI CTYRAG 6 cut(s) 406, 439, 469, 499, 529, 1571
SphI GCATGC 1 cut(s) 1724
SsiI CCGC 5 cut(s) 548, 845, 847, 936, 1026
SspI AATATT 1 cut(s) 1176
SspMI CTAG 6 cut(s) 240, 387, 606, 669, 1005, 1614
SstI GAGCTC 1 cut(s) 1586
StyD4I CCNGG 5 cut(s) 178, 289, 454, 812, 1148
TaiI ACGT 1 cut(s) 1744
TaqI TCGA 5 cut(s) 1547, 1624, 1684, 1770, 1825
TatI WGTACW 1 cut(s) 694
TauI GCSGC 2 cut(s) 551, 1029
TfiI GAWTC 3 cut(s) 1208, 1226, 1849
Tru1I TTAA 6 cut(s) 219, 254, 1058, 1286, 1341, 1858
Tru9I TTAA 6 cut(s) 219, 254, 1058, 1286, 1341, 1858
TscAI CASTG 2 cut(s) 801, 1738
TseFI GTSAC 2 cut(s) 152, 766
TseI GCWGC 3 cut(s) 230, 402, 419
Tsp45I GTSAC 2 cut(s) 152, 766
TspDTI ATGAA 4 cut(s) 132, 295, 1075, 1419
TspRI CASTG 2 cut(s) 801, 1738
Van91I CCANNNNNTGG 3 cut(s) 938, 1360, 1701
VneI GTGCAC 2 cut(s) 480, 1666
VpaK11BI GGWCC 3 cut(s) 99, 512, 602
XapI RAATTY 4 cut(s) 1081, 1097, 1322, 1513
XceI RCATGY 2 cut(s) 923, 1724
XcmI CCANNNNNNNNNTGG 1 cut(s) 297
XmnI GAANNNNTTC 1 cut(s) 302
XspI CTAG 6 cut(s) 240, 387, 606, 669, 1005, 1614
ZraI GACGTC 1 cut(s) 1742
ZrmI AGTACT 1 cut(s) 696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.