Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001744.1

Orthogroup ID

OG0000314

Physical Location & Seq

Genomic Coordinates Forward (+)

990 .. 4467

Gene Structure 3478 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001744.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2724 bp

atggaggccatcgcgaaccaaaacaagcagacctcatcggagttcgcgaccttgcgcaaagaaggttccagcttggttactcaagtcagttcgcatcaaagtgaattggaaagtcaaaaatctgcacgcaaagaggtcatttctgccactgacttgcctataggtggtaatcaacctaagggtctcattgttgaatcacagccttacatagaggctgcacttagagatgatggtccacaaaattgttcttctaacgatattgtcactaaacatatctttgatatctctactgatgaagccatatgtgtggatactggtcagatacatagggggaaagattatgcccatgtttactcctctgatcatccagggggccttcgcgaattgataaaagtaaacaagagccaagaagtgagtaagcatggtctaggggaccaatcggctatttacaacagagagggcccactagatgggcttattcaaaaagctactgacctatgtaaagaacatggccaagaagatgacgaaggtggccatcatattgctcaaatacaaggccgtgatagtggctttcttcacggcacatatattcaacaaccaagctgtggctttgatatatttgggagatatattcgcgtcccaaatttcgagaatgtccaaactcgatattcaaatggccagtttatcatagtgggatgtgaactaacatatcatcagtgcaagttaactcttgtttataattaccaagctttaaatttcttgcaaaatgaatttgcctatgatagtactatacagtccgtagatgcatctcaatataattcctggaaagaaaatagaggcaaacaaatatttgaaatgcctatttttgaagaagagatcaattcaccactctttggtgactctaaatatgatctcgatacaaagccagtgtatgatggatatgatgataattataatttaattattggttccaagaatcatatgaaggagttcaagttctttgaggctcttgatcatgaaaatttagaccagcaagtggtcatctgcaaaagccaattcgtggcttattttgaagacaccatgttctatgacatggtagttggtgacaaagccgatcttgggacattattatctccaaaattaggtgaccgcgaaggaggtggctgcgagcgactacccgcgaaggagatgaccgcgaatgttcgcggggaacatttcgcgaacgcttttctagcaagcaacgatcgcgtgaagcaggcctcgctgatatacatcgcctgggccttgccagcgagcttcaccataaatttccagcaagatatgcatactctgaatagaagtcgattgataatctggatgccagcaagtagctttagtggaagtaggccaattgcaatggcagcgtacattggttcgcacagaaggggaatacatgggatgttgcatagctctagtttgttttggaagtttcagaggttcgcgaaccaaaacaagcagacctcatcggagttcgcgaccttgcgcaaagaaggttccagcttggttactcaagtcagtttgcatcaaagtgaattggaaagtcaaaaatctgcacgcaaagaggtcatttctgccactgacttgcctataggtggtaatcaacctaagggtctcattgttgaatcacagccttacatagaggctgcacttagagatgatggtccacaaaattgttcttctaacgatattgtcactaaacatatctttgatatctctactgatgaagccatatgtgtggatactggtcagatacatagggggaaagattatgcccatgtttactcctctgatcatccagggggccttcgcgaattgataaaagtaaacaagagccaagaagtgagtaagcatggtctaggggaccaatcggctatttacaacagagagggcccactagatgggcttattcaaaaagctactgacctatgtaaagaacatggccaagaagatgacgaaggtggccatcatattgctcaaatacaaggccgtgatagtggctttcttcacggcacatatattcaacaaccaagctgtggctttgatatatttgggagatatattcgcgtcccaaatttcgagaatgtccaaactcgatattcaaatggccagtttatcatagtgggatgtgaactaacatatcatcagtgcaagttaactcttgtttataattaccaagctttaaatttcttgcaaaatgaatttgcctatgatagtactatacagtccgtagatgcatctcaatataattcctggaaagaaaatagaggcaaacaaatatttgaaatgcctatttttgaagaagagatcaattcaccactctttggtgactctaaatatgatctcgatacaaagccagtgtatgatggatatgatgataattataatttaattattggttccaagaatcatatgaaggagttcaagttctttgaggctcttgatcatgaaaatttagaccagcaagtggtcatctgcaaaagccaattcgtggcttattttgaagacaccatgttctatgacatggtagttggtgacaaagccgatcttgggacattattatctccaaaattaggtgaccgcgaaggaggtggctgcgagcgactacccgcgaaggagatgaccgcgaatgttcgcggggaacatttcgcgagcgcttttctaacaagcagcgatcgcgtgaagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004652 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006276 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0034641 GO:0043170 GO:0043412 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070566 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

907

Amino Acids

101.98

Weight (kDa)

5.26

Isoelectric Point (pI)

38.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000314)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02272 FvH4_1g22661 FvH4_2g10242 FvH4_2g34051 FvH4_3g19221 FvH4_3g29651 FvH4_3g30891 FvH4_4g11061 FvH4_5g09250 FvH4_5g15302 FvH4_5g15303 FvH4_5g15304 FvH4_5g28521 FvH4_6g23591 FvH4_7g05710 FvH4_7g19520
pyrus_communis	pycom07g06330
rosa_chinensis	RchiOBHm_Chr5g0027301 RchiOBHm_Chr6g0251451 RchiOBHm_Chr6g0274861
rosa_laevigata	RLG00000007850
rosa_multiflora	Rmu_co8230721.1_g000001 Rmu_sc0000271.1_g000027 Rmu_sc0000303.1_g000024 Rmu_sc0000368.1_g000024 Rmu_sc0000621.1_g000037 Rmu_sc0000693.1_g000081 Rmu_sc0001229.1_g000006 Rmu_sc0001373.1_g000003 Rmu_sc0001459.1_g000001 Rmu_sc0001744.1_g000002 Rmu_sc0001909.1_g000002 Rmu_sc0002053.1_g000012 Rmu_sc0002060.1_g000015 Rmu_sc0002119.1_g000036 Rmu_sc0002177.1_g000007 Rmu_sc0002822.1_g000024 Rmu_sc0002965.1_g000015 Rmu_sc0003363.1_g000051 Rmu_sc0003500.1_g000013 Rmu_sc0004191.1_g000020 Rmu_sc0004904.1_g000032 Rmu_sc0005325.1_g000008 Rmu_sc0005947.1_g000040 Rmu_sc0006475.1_g000001 Rmu_sc0006522.1_g000019 Rmu_sc0007102.1_g000005 Rmu_sc0007810.1_g000003 Rmu_sc0008339.1_g000025 Rmu_sc0008698.1_g000004 Rmu_sc0009313.1_g000006 Rmu_sc0009850.1_g000006 Rmu_sc0010598.1_g000003 Rmu_sc0011162.1_g000002 Rmu_sc0011824.1_g000004 Rmu_sc0011900.1_g000010 Rmu_sc0012291.1_g000006 Rmu_sc0012619.1_g000003 Rmu_sc0014679.1_g000001 Rmu_sc0019053.1_g000001 Rmu_sc0021462.1_g000003 Rmu_sc0024172.1_g000001 Rmu_sc0024173.1_g000001 Rmu_ssc0000052.1_g000016 Rmu_ssc0000392.1_g000010 Rmu_ssc0000421.1_g000062 Rmu_ssc0000479.1_g000006
rosa_roxburghii	Rroxscaffold_153G00436600 Rroxscaffold_1G00008580 Rroxscaffold_1G00016770 Rroxscaffold_1G00029550 Rroxscaffold_1G00036450 Rroxscaffold_1G00040410 Rroxscaffold_1G00047110 Rroxscaffold_1G00060570 Rroxscaffold_2G00081500 Rroxscaffold_2G00081510 Rroxscaffold_2G00086080 Rroxscaffold_2G00099620 Rroxscaffold_2G00099630 Rroxscaffold_2G00099640 Rroxscaffold_2G00109170 Rroxscaffold_2G00127750 Rroxscaffold_2G00128590 Rroxscaffold_2G00130780 Rroxscaffold_2G00131040 Rroxscaffold_2G00143160 Rroxscaffold_3G00229280 Rroxscaffold_3G00229290 Rroxscaffold_3G00229970 Rroxscaffold_3G00242860 Rroxscaffold_3G00242890 Rroxscaffold_3G00242900 Rroxscaffold_3G00248200 Rroxscaffold_4G00284550 Rroxscaffold_4G00288780 Rroxscaffold_4G00298620 Rroxscaffold_4G00298630 Rroxscaffold_4G00312420 Rroxscaffold_4G00320310 Rroxscaffold_4G00322220 Rroxscaffold_4G00323600 Rroxscaffold_4G00331830 Rroxscaffold_4G00332010 Rroxscaffold_4G00332020 Rroxscaffold_5G00344470 Rroxscaffold_5G00345310 Rroxscaffold_5G00356120 Rroxscaffold_5G00368700 Rroxscaffold_5G00379820 Rroxscaffold_5G00382480 Rroxscaffold_6G00395080 Rroxscaffold_6G00405520 Rroxscaffold_6G00428210 Rroxscaffold_7G00193460
rosa_samantha	Rh7CG413200 Rh7DG284900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	738, 954, 2205, 2421
Acc16I	TGCGCA	2 cut(s)	56, 1523
AciI	CCGC	8 cut(s)	1150, 1179, 1194, 1206, 2617, 2646, 2661, 2673
AcoI	YGGCCR	6 cut(s)	511, 532, 676, 1978, 1999, 2143
AcsI	RAATTY	9 cut(s)	643, 754, 770, 1021, 1306, 2110, 2221, 2237, 2488
AfaI	GTAC	3 cut(s)	787, 1406, 2254
AfeI	AGCGCT	1 cut(s)	2692
AjnI	CCWGG	5 cut(s)	367, 821, 1277, 1834, 2288
AloI	GAACNNNNNNTCC	4 cut(s)	980, 1012, 2447, 2479
Alw26I	GTCTC	2 cut(s)	188, 1655
Aor51HI	AGCGCT	1 cut(s)	2692
ApaI	GGGCCC	2 cut(s)	464, 1931
ApeKI	GCWGC	6 cut(s)	215, 1164, 1400, 1682, 2631, 2706
ApoI	RAATTY	9 cut(s)	643, 754, 770, 1021, 1306, 2110, 2221, 2237, 2488
AsiSI	GCGATCGC	1 cut(s)	2713
Asp700I	GAANNNNTTC	2 cut(s)	989, 2456
AspLEI	GCGC	3 cut(s)	57, 1524, 2693
AsuHPI	GGTGA	9 cut(s)	876, 908, 1115, 1157, 1291, 2343, 2375, 2582, 2624
AvaII	GGWCC	4 cut(s)	233, 433, 1700, 1900
AxyI	CCTNAGG	2 cut(s)	177, 1644
BaeGI	GKGCMC	2 cut(s)	464, 1931
BalI	TGGCCA	6 cut(s)	513, 534, 678, 1980, 2001, 2145
BanII	GRGCYC	2 cut(s)	464, 1931
BbsI	GAAGAC	2 cut(s)	1080, 2547
BbvI	GCAGC	6 cut(s)	202, 1151, 1412, 1669, 2618, 2718
BccI	CCATC	9 cut(s)	17, 224, 464, 543, 929, 1691, 1931, 2010, 2396
BceAI	ACGGC	4 cut(s)	543, 595, 2010, 2062
BciT130I	CCWGG	5 cut(s)	369, 823, 1279, 1836, 2290
BciVI	GTATCC	2 cut(s)	304, 1771
BclI	TGATCA	4 cut(s)	361, 1012, 1828, 2479
BcoDI	GTCTC	2 cut(s)	188, 1655
BfaI	CTAG	6 cut(s)	428, 467, 1232, 1452, 1895, 1934
BfmI	CTRYAG	2 cut(s)	159, 1626
BfoI	RGCGCY	1 cut(s)	2694
BfuI	GTATCC	2 cut(s)	304, 1771
BisI	GCNGC	6 cut(s)	216, 1165, 1401, 1683, 2632, 2707
BlsI	GCNGC	6 cut(s)	217, 1166, 1402, 1684, 2633, 2708
BmcAI	AGTACT	2 cut(s)	787, 2254
Bme1390I	CCNGG	5 cut(s)	369, 823, 1279, 1836, 2290
Bme18I	GGWCC	4 cut(s)	233, 433, 1700, 1900
BmrFI	CCNGG	5 cut(s)	369, 823, 1279, 1836, 2290
BmsI	GCATC	7 cut(s)	103, 793, 815, 1347, 1570, 2260, 2282
BpiI	GAAGAC	2 cut(s)	1080, 2547
BpuEI	CTTGAG	2 cut(s)	66, 1533
BsaBI	GATNNNNATC	1 cut(s)	1271
BsaI	GGTCTC	2 cut(s)	188, 1655
BsaJI	CCNNGG	3 cut(s)	368, 1278, 1835
BsaXI	ACNNNNNCTCC	4 cut(s)	980, 1010, 2447, 2477
Bse1I	ACTGG	6 cut(s)	319, 679, 926, 1786, 2146, 2393
Bse21I	CCTNAGG	2 cut(s)	177, 1644
Bse3DI	GCAATG	1 cut(s)	1401
Bse8I	GATNNNNATC	1 cut(s)	1271
BseBI	CCWGG	5 cut(s)	369, 823, 1279, 1836, 2290
BseDI	CCNNGG	3 cut(s)	368, 1278, 1835
BseGI	GGATG	6 cut(s)	364, 701, 1362, 1443, 1831, 2168
BseJI	GATNNNNATC	1 cut(s)	1271
BseMI	GCAATG	1 cut(s)	1401
BseNI	ACTGG	6 cut(s)	319, 679, 926, 1786, 2146, 2393
BseRI	GAGGAG	2 cut(s)	346, 1813
BseSI	GKGCMC	2 cut(s)	464, 1931
BseXI	GCAGC	6 cut(s)	202, 1151, 1412, 1669, 2618, 2718
BsgI	GTGCAG	4 cut(s)	108, 201, 1575, 1668
Bsh1285I	CGRYCG	2 cut(s)	1246, 2713
BsiEI	CGRYCG	2 cut(s)	1246, 2713
BslFI	GGGAC	6 cut(s)	446, 623, 1135, 1913, 2090, 2602
BsmAI	GTCTC	2 cut(s)	188, 1655
BsmFI	GGGAC	6 cut(s)	446, 623, 1135, 1913, 2090, 2602
Bso31I	GGTCTC	2 cut(s)	188, 1655
Bsp120I	GGGCCC	2 cut(s)	460, 1927
Bsp1286I	GDGCHC	2 cut(s)	464, 1931
Bsp68I	TCGCGA	8 cut(s)	14, 47, 381, 1220, 1481, 1514, 1848, 2687
BspACI	CCGC	8 cut(s)	1150, 1179, 1194, 1206, 2617, 2646, 2661, 2673
BspHI	TCATGA	2 cut(s)	1015, 2482
BspTNI	GGTCTC	2 cut(s)	188, 1655
BsrDI	GCAATG	1 cut(s)	1401
BsrI	ACTGG	6 cut(s)	319, 679, 926, 1786, 2146, 2393
BssECI	CCNNGG	3 cut(s)	368, 1278, 1835
Bst2UI	CCWGG	5 cut(s)	369, 823, 1279, 1836, 2290
Bst4CI	ACNGT	2 cut(s)	795, 2262
Bst6I	CTCTTC	2 cut(s)	867, 2334
BstAPI	GCANNNNNTGC	1 cut(s)	1321
BstDEI	CTNAG	4 cut(s)	177, 221, 1644, 1688
BstEII	GGTNACC	2 cut(s)	1145, 2612
BstF5I	GGATG	6 cut(s)	364, 701, 1362, 1443, 1831, 2168
BstH2I	RGCGCY	1 cut(s)	2694
BstHHI	GCGC	3 cut(s)	57, 1524, 2693
BstMAI	GTCTC	2 cut(s)	188, 1655
BstMCI	CGRYCG	2 cut(s)	1246, 2713
BstMWI	GCNNNNNNNGC	7 cut(s)	1232, 1245, 1261, 1289, 1321, 1400, 2712
BstNI	CCWGG	5 cut(s)	369, 823, 1279, 1836, 2290
BstPI	GGTNACC	2 cut(s)	1145, 2612
BstSCI	CCNGG	5 cut(s)	367, 821, 1277, 1834, 2288
BstSFI	CTRYAG	2 cut(s)	159, 1626
BstSLI	GKGCMC	2 cut(s)	464, 1931
BstV1I	GCAGC	6 cut(s)	202, 1151, 1412, 1669, 2618, 2718
BstV2I	GAAGAC	2 cut(s)	1080, 2547
BstXI	CCANNNNNNTGG	2 cut(s)	307, 1774
Bsu36I	CCTNAGG	2 cut(s)	177, 1644
BsuI	GTATCC	2 cut(s)	304, 1771
BtgZI	GCGATG	1 cut(s)	1258
BtsCI	GGATG	6 cut(s)	364, 701, 1362, 1443, 1831, 2168
BtsIMutI	CAGTG	6 cut(s)	147, 722, 933, 1614, 2189, 2400
BtuMI	TCGCGA	8 cut(s)	14, 47, 381, 1220, 1481, 1514, 1848, 2687
CciI	TCATGA	2 cut(s)	1015, 2482
CfoI	GCGC	3 cut(s)	57, 1524, 2693
CseI	GACGC	2 cut(s)	625, 2092
Csp6I	GTAC	3 cut(s)	786, 1405, 2253
CviQI	GTAC	3 cut(s)	786, 1405, 2253
DdeI	CTNAG	4 cut(s)	177, 221, 1644, 1688
DraI	TTTAAA	2 cut(s)	753, 2220
EaeI	YGGCCR	6 cut(s)	511, 532, 676, 1978, 1999, 2143
Eam1104I	CTCTTC	2 cut(s)	867, 2334
EarI	CTCTTC	2 cut(s)	867, 2334
Eco147I	AGGCCT	1 cut(s)	1259
Eco24I	GRGCYC	2 cut(s)	464, 1931
Eco31I	GGTCTC	2 cut(s)	188, 1655
Eco32I	GATATC	2 cut(s)	283, 1750
Eco47I	GGWCC	4 cut(s)	233, 433, 1700, 1900
Eco47III	AGCGCT	1 cut(s)	2692
Eco81I	CCTNAGG	2 cut(s)	177, 1644
Eco91I	GGTNACC	2 cut(s)	1145, 2612
EcoO109I	RGGNCCY	4 cut(s)	373, 460, 1840, 1927
EcoO65I	GGTNACC	2 cut(s)	1145, 2612
EcoRII	CCWGG	5 cut(s)	367, 821, 1277, 1834, 2288
EcoRV	GATATC	2 cut(s)	283, 1750
EcoT22I	ATGCAT	3 cut(s)	808, 1326, 2275
EcoT38I	GRGCYC	2 cut(s)	464, 1931
FalI	AAGNNNNNCTT	4 cut(s)	1101, 1133, 2568, 2600
FaqI	GGGAC	6 cut(s)	446, 623, 1135, 1913, 2090, 2602
FauI	CCCGC	4 cut(s)	1186, 1199, 2653, 2666
FauNDI	CATATG	4 cut(s)	302, 981, 1769, 2448
FbaI	TGATCA	4 cut(s)	361, 1012, 1828, 2479
Fnu4HI	GCNGC	6 cut(s)	216, 1165, 1401, 1683, 2632, 2707
FokI	GGATG	6 cut(s)	351, 708, 1369, 1450, 1818, 2175
FriOI	GRGCYC	2 cut(s)	464, 1931
Fsp4HI	GCNGC	6 cut(s)	216, 1165, 1401, 1683, 2632, 2707
FspBI	CTAG	6 cut(s)	428, 467, 1232, 1452, 1895, 1934
FspI	TGCGCA	2 cut(s)	56, 1523
GlaI	GCGC	3 cut(s)	56, 1523, 2692
GluI	GCNGC	6 cut(s)	216, 1165, 1401, 1683, 2632, 2707
HaeII	RGCGCY	1 cut(s)	2694
HgaI	GACGC	2 cut(s)	625, 2092
HhaI	GCGC	3 cut(s)	57, 1524, 2693
Hin6I	GCGC	3 cut(s)	55, 1522, 2691
HinP1I	GCGC	3 cut(s)	55, 1522, 2691
HincII	GTYRAC	2 cut(s)	726, 2193
HindII	GTYRAC	2 cut(s)	726, 2193
HindIII	AAGCTT	2 cut(s)	747, 2214
HinfI	GANTC	6 cut(s)	194, 899, 976, 1661, 2366, 2443
HpaI	GTTAAC	2 cut(s)	726, 2193
HphI	GGTGA	9 cut(s)	876, 908, 1115, 1157, 1291, 2343, 2375, 2582, 2624
Hpy188I	TCNGA	8 cut(s)	40, 321, 361, 1332, 1473, 1507, 1788, 1828
HpyCH4III	ACNGT	2 cut(s)	795, 2262
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1232, 1245, 1261, 1289, 1321, 1400, 2712
HpyF3I	CTNAG	4 cut(s)	177, 221, 1644, 1688
HspAI	GCGC	3 cut(s)	55, 1522, 2691
Ksp22I	TGATCA	4 cut(s)	361, 1012, 1828, 2479
KspAI	GTTAAC	2 cut(s)	726, 2193
Lsp1109I	GCAGC	6 cut(s)	202, 1151, 1412, 1669, 2618, 2718
LweI	GCATC	7 cut(s)	103, 793, 815, 1347, 1570, 2260, 2282
MaeI	CTAG	6 cut(s)	428, 467, 1232, 1452, 1895, 1934
MfeI	CAATTG	1 cut(s)	1389
MhlI	GDGCHC	2 cut(s)	464, 1931
MlsI	TGGCCA	6 cut(s)	513, 534, 678, 1980, 2001, 2145
MluNI	TGGCCA	6 cut(s)	513, 534, 678, 1980, 2001, 2145
MlyI	GAGTC	2 cut(s)	893, 2360
Mox20I	TGGCCA	6 cut(s)	513, 534, 678, 1980, 2001, 2145
Mph1103I	ATGCAT	3 cut(s)	808, 1326, 2275
MroXI	GAANNNNTTC	2 cut(s)	989, 2456
MscI	TGGCCA	6 cut(s)	513, 534, 678, 1980, 2001, 2145
MseI	TTAA	6 cut(s)	725, 752, 959, 2192, 2219, 2426
MslI	CAYNNNNRTG	4 cut(s)	99, 305, 1566, 1772
Msp20I	TGGCCA	6 cut(s)	513, 534, 678, 1980, 2001, 2145
MspR9I	CCNGG	5 cut(s)	369, 823, 1279, 1836, 2290
MunI	CAATTG	1 cut(s)	1389
MvaI	CCWGG	5 cut(s)	369, 823, 1279, 1836, 2290
MwoI	GCNNNNNNNGC	7 cut(s)	1232, 1245, 1261, 1289, 1321, 1400, 2712
NdeI	CATATG	4 cut(s)	302, 981, 1769, 2448
NmuCI	GTSAC	8 cut(s)	262, 896, 1103, 1145, 1729, 2363, 2570, 2612
NruI	TCGCGA	8 cut(s)	14, 47, 381, 1220, 1481, 1514, 1848, 2687
NsbI	TGCGCA	2 cut(s)	56, 1523
NsiI	ATGCAT	3 cut(s)	808, 1326, 2275
PagI	TCATGA	2 cut(s)	1015, 2482
PceI	AGGCCT	1 cut(s)	1259
PcsI	WCGNNNNNNNCGW	2 cut(s)	44, 1511
PdmI	GAANNNNTTC	2 cut(s)	989, 2456
PfeI	GAWTC	4 cut(s)	194, 976, 1661, 2443
PfoI	TCCNGGA	2 cut(s)	821, 2288
PkrI	GCNGC	6 cut(s)	217, 1166, 1402, 1684, 2633, 2708
Ple19I	CGATCG	2 cut(s)	1246, 2713
PleI	GAGTC	2 cut(s)	893, 2360
PpsI	GAGTC	2 cut(s)	893, 2360
PsiI	TTATAA	4 cut(s)	738, 954, 2205, 2421
Psp6I	CCWGG	5 cut(s)	367, 821, 1277, 1834, 2288
PspEI	GGTNACC	2 cut(s)	1145, 2612
PspGI	CCWGG	5 cut(s)	367, 821, 1277, 1834, 2288
PspOMI	GGGCCC	2 cut(s)	460, 1927
PvuI	CGATCG	2 cut(s)	1246, 2713
RgaI	GCGATCGC	1 cut(s)	2713
RruI	TCGCGA	8 cut(s)	14, 47, 381, 1220, 1481, 1514, 1848, 2687
RsaI	GTAC	3 cut(s)	787, 1406, 2254
RsaNI	GTAC	3 cut(s)	786, 1405, 2253
RseI	CAYNNNNRTG	4 cut(s)	99, 305, 1566, 1772
SaqAI	TTAA	6 cut(s)	725, 752, 959, 2192, 2219, 2426
SatI	GCNGC	6 cut(s)	216, 1165, 1401, 1683, 2632, 2707
ScaI	AGTACT	2 cut(s)	787, 2254
SchI	GAGTC	2 cut(s)	893, 2360
ScrFI	CCNGG	5 cut(s)	369, 823, 1279, 1836, 2290
SduI	GDGCHC	2 cut(s)	464, 1931
SfaAI	GCGATCGC	1 cut(s)	2713
SfaNI	GCATC	7 cut(s)	103, 793, 815, 1347, 1570, 2260, 2282
SfcI	CTRYAG	2 cut(s)	159, 1626
SgfI	GCGATCGC	1 cut(s)	2713
SinI	GGWCC	4 cut(s)	233, 433, 1700, 1900
SmiMI	CAYNNNNRTG	4 cut(s)	99, 305, 1566, 1772
SmlI	CTYRAG	2 cut(s)	81, 1548
SmoI	CTYRAG	2 cut(s)	81, 1548
SseBI	AGGCCT	1 cut(s)	1259
SsiI	CCGC	8 cut(s)	1150, 1179, 1194, 1206, 2617, 2646, 2661, 2673
SspI	AATATT	2 cut(s)	849, 2316
SspMI	CTAG	6 cut(s)	428, 467, 1232, 1452, 1895, 1934
StuI	AGGCCT	1 cut(s)	1259
StyD4I	CCNGG	5 cut(s)	367, 821, 1277, 1834, 2288
TaaI	ACNGT	2 cut(s)	795, 2262
TaqI	TCGA	7 cut(s)	648, 664, 915, 1342, 2115, 2131, 2382
TatI	WGTACW	2 cut(s)	785, 2252
TfiI	GAWTC	4 cut(s)	194, 976, 1661, 2443
Tru1I	TTAA	6 cut(s)	725, 752, 959, 2192, 2219, 2426
Tru9I	TTAA	6 cut(s)	725, 752, 959, 2192, 2219, 2426
TscAI	CASTG	6 cut(s)	154, 722, 933, 1621, 2189, 2400
TseFI	GTSAC	8 cut(s)	262, 896, 1103, 1145, 1729, 2363, 2570, 2612
TseI	GCWGC	6 cut(s)	215, 1164, 1400, 1682, 2631, 2706
Tsp45I	GTSAC	8 cut(s)	262, 896, 1103, 1145, 1729, 2363, 2570, 2612
TspDTI	ATGAA	8 cut(s)	309, 783, 998, 1032, 1776, 2250, 2465, 2499
TspGWI	ACGGA	2 cut(s)	787, 2254
TspRI	CASTG	6 cut(s)	154, 722, 933, 1621, 2189, 2400
VpaK11BI	GGWCC	4 cut(s)	233, 433, 1700, 1900
XapI	RAATTY	9 cut(s)	643, 754, 770, 1021, 1306, 2110, 2221, 2237, 2488
XmnI	GAANNNNTTC	2 cut(s)	989, 2456
XspI	CTAG	6 cut(s)	428, 467, 1232, 1452, 1895, 1934
ZrmI	AGTACT	2 cut(s)	787, 2254
Zsp2I	ATGCAT	3 cut(s)	808, 1326, 2275

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.