Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011162.1

Orthogroup ID

OG0000314

Physical Location & Seq

Genomic Coordinates Reverse (-)

4435 .. 5856

Gene Structure 1422 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011162.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1296 bp

atggccagtgttgccaccaattatgacgacattacaacagaagaggcttttgtttcgaagtctatcccagaaggagcgactttcgacgagacaattgcgatccttatggagaatgtcgagaaccatcgcaagaagatggacgcggatcttgccagagaaactgaaaaatcagaaaggctccgccgcgagtttgagcagcgtatgactctatacgcggagagtaccaggcagcaggttacacgaacagagggtgccttgaaggcgcaagctataaccatcgctgccgagcaggatgagcgtcataagacaattttgaacgccatcgtgagcccaaacaagcatacctcatcggagttcgcgaccttgcgcaaggaaggtcccagcttgactactcaagtcggttcacagcaaggtgaattggaaagccagaaatcttcgctcgaagaggttgtttctgaggttgaattgcccacaggtggcaataaacctaaatgcctcattgatgagtcacggccttacatagaggctttgcatggagaagatggtcaacaagattgttcctctgacaatataattgtttcagaacaaatatatgatttctccactgatcaggccaaatacgtggctactgatcagatgcatggggggcatgatattgtccaggttcacccccttaataaccagaagcggttgtatgatcaatttaattatggttatgctactggacgtcatcctgaccaagataatcaaagccacaatcaacttaattatgaattaagttgttatatggctgctagacgtcctcatcatgcagaaggtcaagagtgtgtcagtggctttgaaatttgtaaagaaggattcggtgaccccaagtccagtcttgacacagagccaatctatgatgaatatgatggtgattacaatttaattatgggttccaaaaatcatatgcagcagttcaaatcccttgaacaagtggtcaaatacagtagccagtctgtggcttattctgaagacaccatgttctatgacatggtagttggcgacaaagccgatcttgggacgtcatcatctccaaaattgcaattgaggatctcgcttcgtcaaccaacaaagagacttgaggggcaatattactccttctatgagccagatttcttccaagttttcgacgcgaaatatctttgttgctttcctacaagctcttacaagagggattttcatgctataaattttaatacgtcggaggttggagtgaagcatagatggcctcccccgtggccttctagaggttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004652 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006276 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0031123 GO:0031124 GO:0034641 GO:0043170 GO:0043412 GO:0043631 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0070566 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PolyA_pol PolyA_pol_RNAbd

Protein Analysis

431

Amino Acids

49.02

Weight (kDa)

5.05

Isoelectric Point (pI)

57.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000314)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02272 FvH4_1g22661 FvH4_2g10242 FvH4_2g34051 FvH4_3g19221 FvH4_3g29651 FvH4_3g30891 FvH4_4g11061 FvH4_5g09250 FvH4_5g15302 FvH4_5g15303 FvH4_5g15304 FvH4_5g28521 FvH4_6g23591 FvH4_7g05710 FvH4_7g19520
pyrus_communis	pycom07g06330
rosa_chinensis	RchiOBHm_Chr5g0027301 RchiOBHm_Chr6g0251451 RchiOBHm_Chr6g0274861
rosa_laevigata	RLG00000007850
rosa_multiflora	Rmu_co8230721.1_g000001 Rmu_sc0000271.1_g000027 Rmu_sc0000303.1_g000024 Rmu_sc0000368.1_g000024 Rmu_sc0000621.1_g000037 Rmu_sc0000693.1_g000081 Rmu_sc0001229.1_g000006 Rmu_sc0001373.1_g000003 Rmu_sc0001459.1_g000001 Rmu_sc0001744.1_g000002 Rmu_sc0001909.1_g000002 Rmu_sc0002053.1_g000012 Rmu_sc0002060.1_g000015 Rmu_sc0002119.1_g000036 Rmu_sc0002177.1_g000007 Rmu_sc0002822.1_g000024 Rmu_sc0002965.1_g000015 Rmu_sc0003363.1_g000051 Rmu_sc0003500.1_g000013 Rmu_sc0004191.1_g000020 Rmu_sc0004904.1_g000032 Rmu_sc0005325.1_g000008 Rmu_sc0005947.1_g000040 Rmu_sc0006475.1_g000001 Rmu_sc0006522.1_g000019 Rmu_sc0007102.1_g000005 Rmu_sc0007810.1_g000003 Rmu_sc0008339.1_g000025 Rmu_sc0008698.1_g000004 Rmu_sc0009313.1_g000006 Rmu_sc0009850.1_g000006 Rmu_sc0010598.1_g000003 Rmu_sc0011162.1_g000002 Rmu_sc0011824.1_g000004 Rmu_sc0011900.1_g000010 Rmu_sc0012291.1_g000006 Rmu_sc0012619.1_g000003 Rmu_sc0014679.1_g000001 Rmu_sc0019053.1_g000001 Rmu_sc0021462.1_g000003 Rmu_sc0024172.1_g000001 Rmu_sc0024173.1_g000001 Rmu_ssc0000052.1_g000016 Rmu_ssc0000392.1_g000010 Rmu_ssc0000421.1_g000062 Rmu_ssc0000479.1_g000006
rosa_roxburghii	Rroxscaffold_153G00436600 Rroxscaffold_1G00008580 Rroxscaffold_1G00016770 Rroxscaffold_1G00029550 Rroxscaffold_1G00036450 Rroxscaffold_1G00040410 Rroxscaffold_1G00047110 Rroxscaffold_1G00060570 Rroxscaffold_2G00081500 Rroxscaffold_2G00081510 Rroxscaffold_2G00086080 Rroxscaffold_2G00099620 Rroxscaffold_2G00099630 Rroxscaffold_2G00099640 Rroxscaffold_2G00109170 Rroxscaffold_2G00127750 Rroxscaffold_2G00128590 Rroxscaffold_2G00130780 Rroxscaffold_2G00131040 Rroxscaffold_2G00143160 Rroxscaffold_3G00229280 Rroxscaffold_3G00229290 Rroxscaffold_3G00229970 Rroxscaffold_3G00242860 Rroxscaffold_3G00242890 Rroxscaffold_3G00242900 Rroxscaffold_3G00248200 Rroxscaffold_4G00284550 Rroxscaffold_4G00288780 Rroxscaffold_4G00298620 Rroxscaffold_4G00298630 Rroxscaffold_4G00312420 Rroxscaffold_4G00320310 Rroxscaffold_4G00322220 Rroxscaffold_4G00323600 Rroxscaffold_4G00331830 Rroxscaffold_4G00332010 Rroxscaffold_4G00332020 Rroxscaffold_5G00344470 Rroxscaffold_5G00345310 Rroxscaffold_5G00356120 Rroxscaffold_5G00368700 Rroxscaffold_5G00379820 Rroxscaffold_5G00382480 Rroxscaffold_6G00395080 Rroxscaffold_6G00405520 Rroxscaffold_6G00428210 Rroxscaffold_7G00193460
rosa_samantha	Rh7CG413200 Rh7DG284900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	3 cut(s)	730, 802, 1067
Acc16I	TGCGCA	1 cut(s)	368
Acc36I	ACCTGC	1 cut(s)	223
AccB1I	GGYRCC	1 cut(s)	251
AccB7I	CCANNNNNTGG	1 cut(s)	1000
AccII	CGCG	5 cut(s)	143, 186, 215, 359, 1175
AciI	CCGC	5 cut(s)	143, 181, 184, 215, 688
AclWI	GGATC	3 cut(s)	94, 153, 1100
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	843, 1231
AcuI	CTGAAG	1 cut(s)	1032
AcyI	GRCGYC	3 cut(s)	727, 799, 1064
AfaI	GTAC	1 cut(s)	223
AfiI	CCNNNNNNNGG	4 cut(s)	476, 1000, 1059, 1289
AgsI	TTSAA	6 cut(s)	259, 316, 464, 842, 961, 971
AhdI	GACNNNNNGTC	1 cut(s)	871
AjnI	CCWGG	2 cut(s)	224, 660
AluBI	AGCT	3 cut(s)	269, 384, 1203
AluI	AGCT	3 cut(s)	269, 384, 1203
Alw26I	GTCTC	2 cut(s)	83, 1111
AlwI	GGATC	3 cut(s)	94, 153, 1100
AoxI	GGCC	5 cut(s)	3, 512, 612, 1268, 1280
ApeKI	GCWGC	5 cut(s)	196, 229, 281, 791, 952
ApoI	RAATTY	2 cut(s)	843, 1231
AspLEI	GCGC	2 cut(s)	265, 369
AspS9I	GGNCC	1 cut(s)	377
AsuHPI	GGTGA	4 cut(s)	425, 659, 875, 926
AsuII	TTCGAA	1 cut(s)	56
AvaII	GGWCC	1 cut(s)	377
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	251
BanII	GRGCYC	1 cut(s)	332
BbsI	GAAGAC	1 cut(s)	1020
BbvI	GCAGC	5 cut(s)	208, 241, 268, 778, 964
BccI	CCATC	7 cut(s)	130, 132, 284, 329, 536, 905, 1260
BceAI	ACGGC	1 cut(s)	527
BcgI	CGANNNNNNTGC	2 cut(s)	77, 111
BciT130I	CCWGG	2 cut(s)	226, 662
BclI	TGATCA	3 cut(s)	607, 631, 697
BcoDI	GTCTC	2 cut(s)	83, 1111
BfaI	CTAG	2 cut(s)	795, 1287
BfuAI	ACCTGC	1 cut(s)	223
BglI	GCCNNNNNGGC	1 cut(s)	260
BisI	GCNGC	6 cut(s)	184, 197, 230, 282, 792, 953
BlsI	GCNGC	6 cut(s)	185, 198, 231, 283, 793, 954
Bme1390I	CCNGG	2 cut(s)	226, 662
Bme18I	GGWCC	1 cut(s)	377
BmeRI	GACNNNNNGTC	1 cut(s)	871
BmgT120I	GGNCC	1 cut(s)	377
BmiI	GGNNCC	4 cut(s)	179, 253, 379, 937
BmrFI	CCNGG	2 cut(s)	226, 662
BmsI	GCATC	1 cut(s)	627
BpiI	GAAGAC	1 cut(s)	1020
Bpu14I	TTCGAA	1 cut(s)	56
BpuEI	CTTGAG	2 cut(s)	378, 1142
BsaAI	YACGTR	1 cut(s)	622
BsaHI	GRCGYC	3 cut(s)	727, 799, 1064
BsaJI	CCNNGG	1 cut(s)	1277
Bsc4I	CCNNNNNNNGG	4 cut(s)	476, 1000, 1059, 1289
Bse1I	ACTGG	4 cut(s)	6, 727, 876, 994
BseBI	CCWGG	2 cut(s)	226, 662
BseDI	CCNNGG	1 cut(s)	1277
BseGI	GGATG	2 cut(s)	298, 730
BseLI	CCNNNNNNNGG	4 cut(s)	476, 1000, 1059, 1289
BseMII	CTCAG	1 cut(s)	447
BseNI	ACTGG	4 cut(s)	6, 727, 876, 994
BseXI	GCAGC	5 cut(s)	208, 241, 268, 778, 964
BseYI	CCCAGC	1 cut(s)	380
Bsh1236I	CGCG	5 cut(s)	143, 186, 215, 359, 1175
BshFI	GGCC	5 cut(s)	5, 514, 614, 1270, 1282
BshNI	GGYRCC	1 cut(s)	251
BslFI	GGGAC	2 cut(s)	363, 1075
BslI	CCNNNNNNNGG	4 cut(s)	476, 1000, 1059, 1289
BsmAI	GTCTC	2 cut(s)	83, 1111
BsmFI	GGGAC	2 cut(s)	363, 1075
BsnI	GGCC	5 cut(s)	5, 514, 614, 1270, 1282
Bsp119I	TTCGAA	1 cut(s)	56
Bsp1286I	GDGCHC	1 cut(s)	332
Bsp143I	GATC	7 cut(s)	99, 145, 607, 631, 697, 1054, 1092
Bsp68I	TCGCGA	1 cut(s)	359
BspACI	CCGC	5 cut(s)	143, 181, 184, 215, 688
BspANI	GGCC	5 cut(s)	5, 514, 614, 1270, 1282
BspCNI	CTCAG	1 cut(s)	448
BspFNI	CGCG	5 cut(s)	143, 186, 215, 359, 1175
BspLI	GGNNCC	4 cut(s)	179, 253, 379, 937
BspMI	ACCTGC	1 cut(s)	223
BspPI	GGATC	3 cut(s)	94, 153, 1100
BspT104I	TTCGAA	1 cut(s)	56
BspT107I	GGYRCC	1 cut(s)	251
BsrI	ACTGG	4 cut(s)	6, 727, 876, 994
BssECI	CCNNGG	1 cut(s)	1277
BssMI	GATC	7 cut(s)	99, 145, 607, 631, 697, 1054, 1092
BssNI	GRCGYC	3 cut(s)	727, 799, 1064
Bst2UI	CCWGG	2 cut(s)	226, 662
Bst4CI	ACNGT	1 cut(s)	989
Bst6I	CTCTTC	2 cut(s)	36, 438
BstACI	GRCGYC	3 cut(s)	727, 799, 1064
BstBAI	YACGTR	1 cut(s)	622
BstBI	TTCGAA	1 cut(s)	56
BstC8I	GCNNGC	1 cut(s)	267
BstDEI	CTNAG	1 cut(s)	456
BstDSI	CCRYGG	1 cut(s)	1277
BstEII	GGTNACC	1 cut(s)	863
BstENI	CCTNNNNNAGG	1 cut(s)	1287
BstF5I	GGATG	2 cut(s)	298, 730
BstFNI	CGCG	5 cut(s)	143, 186, 215, 359, 1175
BstHHI	GCGC	2 cut(s)	265, 369
BstKTI	GATC	7 cut(s)	102, 148, 610, 634, 700, 1057, 1095
BstMAI	GTCTC	2 cut(s)	83, 1111
BstMBI	GATC	7 cut(s)	99, 145, 607, 631, 697, 1054, 1092
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 149, 260, 295, 646, 1267
BstNI	CCWGG	2 cut(s)	226, 662
BstPI	GGTNACC	1 cut(s)	863
BstSCI	CCNGG	2 cut(s)	224, 660
BstUI	CGCG	5 cut(s)	143, 186, 215, 359, 1175
BstV1I	GCAGC	5 cut(s)	208, 241, 268, 778, 964
BstV2I	GAAGAC	1 cut(s)	1020
BstX2I	RGATCY	2 cut(s)	145, 1092
BstXI	CCANNNNNNTGG	1 cut(s)	622
BstYI	RGATCY	2 cut(s)	145, 1092
BsuRI	GGCC	5 cut(s)	5, 514, 614, 1270, 1282
BtgI	CCRYGG	1 cut(s)	1277
BtgZI	GCGATG	2 cut(s)	110, 262
BtsCI	GGATG	2 cut(s)	298, 730
BtsIMutI	CAGTG	3 cut(s)	13, 603, 838
BtuMI	TCGCGA	1 cut(s)	359
BveI	ACCTGC	1 cut(s)	223
Cac8I	GCNNGC	1 cut(s)	267
CfoI	GCGC	2 cut(s)	265, 369
Cfr13I	GGNCC	1 cut(s)	377
CseI	GACGC	3 cut(s)	149, 287, 1181
Csp6I	GTAC	1 cut(s)	222
CviAII	CATG	7 cut(s)	533, 641, 650, 809, 1021, 1033, 1223
CviQI	GTAC	1 cut(s)	222
DdeI	CTNAG	1 cut(s)	456
DpnI	GATC	7 cut(s)	101, 147, 609, 633, 699, 1056, 1094
DpnII	GATC	7 cut(s)	99, 145, 607, 631, 697, 1054, 1092
DriI	GACNNNNNGTC	1 cut(s)	871
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	36, 438
Eam1105I	GACNNNNNGTC	1 cut(s)	871
EarI	CTCTTC	2 cut(s)	36, 438
EciI	GGCGGA	1 cut(s)	170
Eco24I	GRGCYC	1 cut(s)	332
Eco47I	GGWCC	1 cut(s)	377
Eco57I	CTGAAG	1 cut(s)	1032
Eco91I	GGTNACC	1 cut(s)	863
EcoNI	CCTNNNNNAGG	1 cut(s)	1287
EcoO109I	RGGNCCY	1 cut(s)	377
EcoO65I	GGTNACC	1 cut(s)	863
EcoRII	CCWGG	2 cut(s)	224, 660
EcoT22I	ATGCAT	1 cut(s)	642
EcoT38I	GRGCYC	1 cut(s)	332
FaeI	CATG	7 cut(s)	536, 644, 653, 812, 1024, 1036, 1226
FalI	AAGNNNNNCTT	2 cut(s)	1041, 1073
FaqI	GGGAC	2 cut(s)	363, 1075
FatI	CATG	7 cut(s)	532, 640, 649, 808, 1020, 1032, 1222
FauNDI	CATATG	1 cut(s)	948
FbaI	TGATCA	3 cut(s)	607, 631, 697
Fnu4HI	GCNGC	6 cut(s)	184, 197, 230, 282, 792, 953
FokI	GGATG	2 cut(s)	305, 717
FriOI	GRGCYC	1 cut(s)	332
Fsp4HI	GCNGC	6 cut(s)	184, 197, 230, 282, 792, 953
FspBI	CTAG	2 cut(s)	795, 1287
FspI	TGCGCA	1 cut(s)	368
GlaI	GCGC	2 cut(s)	264, 368
GluI	GCNGC	6 cut(s)	184, 197, 230, 282, 792, 953
GsaI	CCCAGC	1 cut(s)	384
HaeIII	GGCC	5 cut(s)	5, 514, 614, 1270, 1282
HgaI	GACGC	3 cut(s)	149, 287, 1181
HhaI	GCGC	2 cut(s)	265, 369
Hin1I	GRCGYC	3 cut(s)	727, 799, 1064
Hin1II	CATG	7 cut(s)	536, 644, 653, 812, 1024, 1036, 1226
Hin6I	GCGC	2 cut(s)	263, 367
HinP1I	GCGC	2 cut(s)	263, 367
HincII	GTYRAC	2 cut(s)	548, 1106
HindII	GTYRAC	2 cut(s)	548, 1106
HinfI	GANTC	3 cut(s)	205, 506, 858
HphI	GGTGA	4 cut(s)	425, 659, 875, 926
Hpy166II	GTNNAC	4 cut(s)	404, 548, 667, 1106
Hpy188I	TCNGA	8 cut(s)	172, 352, 457, 565, 583, 636, 1012, 1246
Hpy188III	TCNNGA	7 cut(s)	118, 325, 358, 734, 821, 881, 1287
Hpy8I	GTNNAC	4 cut(s)	404, 548, 667, 1106
Hpy99I	CGWCG	3 cut(s)	89, 1175, 1246
HpyAV	CCTTC	7 cut(s)	65, 253, 368, 809, 848, 1150, 1293
HpyCH4III	ACNGT	1 cut(s)	989
HpyCH4IV	ACGT	5 cut(s)	621, 727, 799, 1064, 1241
HpyCH4V	TGCA	5 cut(s)	532, 640, 812, 952, 1084
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 149, 260, 295, 646, 1267
HpyF3I	CTNAG	1 cut(s)	456
HpySE526I	ACGT	5 cut(s)	621, 727, 799, 1064, 1241
Hsp92I	GRCGYC	3 cut(s)	727, 799, 1064
Hsp92II	CATG	7 cut(s)	536, 644, 653, 812, 1024, 1036, 1226
HspAI	GCGC	2 cut(s)	263, 367
Ksp22I	TGATCA	3 cut(s)	607, 631, 697
Kzo9I	GATC	7 cut(s)	99, 145, 607, 631, 697, 1054, 1092
LmnI	GCTCC	2 cut(s)	74, 183
Lsp1109I	GCAGC	5 cut(s)	208, 241, 268, 778, 964
LweI	GCATC	1 cut(s)	627
MaeI	CTAG	2 cut(s)	795, 1287
MaeII	ACGT	5 cut(s)	621, 727, 799, 1064, 1241
MaeIII	GTNAC	3 cut(s)	235, 507, 863
MalI	GATC	7 cut(s)	101, 147, 609, 633, 699, 1056, 1094
MboI	GATC	7 cut(s)	99, 145, 607, 631, 697, 1054, 1092
MboII	GAAGA	7 cut(s)	53, 145, 426, 455, 551, 1025, 1150
MfeI	CAATTG	2 cut(s)	93, 1085
MflI	RGATCY	2 cut(s)	145, 1092
MhlI	GDGCHC	1 cut(s)	332
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	199, 515
MmeI	TCCRAC	2 cut(s)	1224, 1231
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	642
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	6 cut(s)	675, 705, 765, 776, 926, 1236
Msp20I	TGGCCA	1 cut(s)	5
MspR9I	CCNGG	2 cut(s)	226, 662
MunI	CAATTG	2 cut(s)	93, 1085
MvaI	CCWGG	2 cut(s)	226, 662
MvnI	CGCG	5 cut(s)	143, 186, 215, 359, 1175
MwoI	GCNNNNNNNGC	6 cut(s)	11, 149, 260, 295, 646, 1267
NdeI	CATATG	1 cut(s)	948
NdeII	GATC	7 cut(s)	99, 145, 607, 631, 697, 1054, 1092
NlaIII	CATG	7 cut(s)	536, 644, 653, 812, 1024, 1036, 1226
NlaIV	GGNNCC	4 cut(s)	179, 253, 379, 937
NmeAIII	GCCGAG	1 cut(s)	310
NmuCI	GTSAC	2 cut(s)	507, 863
NruI	TCGCGA	1 cut(s)	359
NsbI	TGCGCA	1 cut(s)	368
NsiI	ATGCAT	1 cut(s)	642
NspV	TTCGAA	1 cut(s)	56
PcsI	WCGNNNNNNNCGW	1 cut(s)	356
PfeI	GAWTC	1 cut(s)	858
PflMI	CCANNNNNTGG	1 cut(s)	1000
PkrI	GCNGC	6 cut(s)	185, 198, 231, 283, 793, 954
PleI	GAGTC	2 cut(s)	199, 514
PpsI	GAGTC	2 cut(s)	199, 514
Ppu21I	YACGTR	1 cut(s)	622
PpuMI	RGGWCCY	1 cut(s)	377
Psp5II	RGGWCCY	1 cut(s)	377
Psp6I	CCWGG	2 cut(s)	224, 660
PspEI	GGTNACC	1 cut(s)	863
PspFI	CCCAGC	1 cut(s)	380
PspGI	CCWGG	2 cut(s)	224, 660
PspN4I	GGNNCC	4 cut(s)	179, 253, 379, 937
PspPI	GGNCC	1 cut(s)	377
PspPPI	RGGWCCY	1 cut(s)	377
PsuI	RGATCY	2 cut(s)	145, 1092
RruI	TCGCGA	1 cut(s)	359
RsaI	GTAC	1 cut(s)	223
RsaNI	GTAC	1 cut(s)	222
SaqAI	TTAA	6 cut(s)	675, 705, 765, 776, 926, 1236
SatI	GCNGC	6 cut(s)	184, 197, 230, 282, 792, 953
Sau3AI	GATC	7 cut(s)	99, 145, 607, 631, 697, 1054, 1092
Sau96I	GGNCC	1 cut(s)	377
SchI	GAGTC	2 cut(s)	199, 515
ScrFI	CCNGG	2 cut(s)	226, 662
SduI	GDGCHC	1 cut(s)	332
SfaNI	GCATC	1 cut(s)	627
SfuI	TTCGAA	1 cut(s)	56
SinI	GGWCC	1 cut(s)	377
SmlI	CTYRAG	2 cut(s)	393, 1121
SmoI	CTYRAG	2 cut(s)	393, 1121
SsiI	CCGC	5 cut(s)	143, 181, 184, 215, 688
SspI	AATATT	1 cut(s)	1133
SspMI	CTAG	2 cut(s)	795, 1287
StyD4I	CCNGG	2 cut(s)	224, 660
TaaI	ACNGT	1 cut(s)	989
TaiI	ACGT	5 cut(s)	624, 730, 802, 1067, 1244
TaqI	TCGA	5 cut(s)	56, 84, 117, 441, 1170
TauI	GCSGC	1 cut(s)	186
TfiI	GAWTC	1 cut(s)	858
Tru1I	TTAA	6 cut(s)	675, 705, 765, 776, 926, 1236
Tru9I	TTAA	6 cut(s)	675, 705, 765, 776, 926, 1236
TscAI	CASTG	3 cut(s)	13, 610, 838
TseFI	GTSAC	2 cut(s)	507, 863
TseI	GCWGC	5 cut(s)	196, 229, 281, 791, 952
Tsp45I	GTSAC	2 cut(s)	507, 863
TspDTI	ATGAA	3 cut(s)	786, 918, 1211
TspRI	CASTG	3 cut(s)	13, 610, 838
Van91I	CCANNNNNTGG	1 cut(s)	1000
VpaK11BI	GGWCC	1 cut(s)	377
XagI	CCTNNNNNAGG	1 cut(s)	1287
XapI	RAATTY	2 cut(s)	843, 1231
XbaI	TCTAGA	1 cut(s)	1286
XspI	CTAG	2 cut(s)	795, 1287
ZraI	GACGTC	3 cut(s)	728, 800, 1065
Zsp2I	ATGCAT	1 cut(s)	642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.