FvH4_2g33870

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000166
Physical Location & Seq
Reverse (-)
25293501 .. 25295945
2445 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g33870.t1

Sequence Viewer

Length: 2367 bp
ATGGATCCTCGGTTTCTCATTCTACTTCTCTCTCTGGCCATCACTTCTCCAACTTCATCTTCCACCTCCGACTTATTGAGTGAAGGCTCATCCCTCTCTGTAGAGAAACCAGAAGATGTTCTGGTTTCACCTGGCCGTGTTTTCAAAGCCGGCTTTCATCAAGTTGGCAACAACTCATACTGCTTTGCCATTTGGTTCAACGAACCATCAGACTCGTACCAGAACCGAACCATAGTCTGGATGGCAAATCGTGACCAACCAGTCAACGGGAAGCGCTCAAAGCTTTCCCTCCTCAAAACTGGTAATGTCATCTTAACTGATGCTGCTCAATCCCACGTTTGGACCACAACCACCAGCTCACTCTCCCCTGCACGTTTAAGTCTCCACGACTCCGGTAATCTGGTTCTGCTGGATCTGAAGACCAAGGTTGTCCTATGGCAGAGCTTTGACTCCCCAACTGATACCCTTCTTCCACTCCAACCCTTCACCAGAACCGCAAAACTTGTCTCCACCAGAAGCCAGAGCAACTTCTCCTCTGGCTTCTATAAGCTCTTCTTCGACAATGATAACCTTATGAGGCTACTCTTTGATGGCCCTGAGATTTCTAGTGCCTACTGGCCCAACCCTGCATATGTGAGCTGGGATAATGCAAGGTCTACTTACAACAGCACTAGAACTGCCGTGCTTGATTCCTTAGGCAGTTTTGCATCTTCGGATAATTTGACCTTTCTTGCAGCTGATTATGGTGCAAAGTTGCAGAGAAGGTTGACTATTGATTTTGATGGAAATGTTCGATTGTACAGTCGTGAAAAGCCAGGAGAGAACTGGAAAGTGACATGGCAGGCGTTTTCTGATCCATGTGTGATTCACGGAATTTGTGGAGCTAACAGTGTCTGTAGCTACGATCCTAGTTCTGGTAGGAAATGTTCATGCCTTCCCGGGTATCAGATGCAAAATCATACTGATTGGTCTCTTGGTTGTCAACCGGAATTCCAATTCTCTTATGGAGAAGGCGAGTCTCGTTTTCTCCAGCTTAGTCAAGTTGAGTTCTATGGCTATGATTACAATGAGTACCAAAACTATAGCTATGATGATTGCGAACAAAGATGCTTGGAACTGGATAACTGCAAGGGGTTTCAGTACACATTTGCTTCTGGTGTTTATAAATGTAATCCCAAGACGCAGTTGCGAAGTGGGCACAGCTGGAACACTCAAGGTTACTTCTATCTGAGACTGCCGAAGGCCCACCTCTTTTCTAACATAGACATCAATCCAATGAAGAACCTTGGGTTAAGTTGCACAGAAAAAGTTGTTGATCTCGAGAGGGAGTATGTTAAAAATCGAGTCAGTAAGCCGGTGAGGTTCCTGCTCTGGTTTGCCTGTGGAGTTGGGGGTGTTGAAATCATTTGTATTGTTCTGGTTTGGGGTTTGTTGAAATCAAACGAGGATATTCATGGCTATGCTGTTACTGCAACCGGGTTCAAAAGGTTCGGCTACGCTGAGCTCAAGACTGCGACTCGGGGTTTCAGTGAAGAAATTGGAAGAGGCGCAGGAGGAGTTGTTTACAAAGGTGTATTGGCTGATCAGCGAGTGGCAGCGATTAAGGTACTCTACGAAGCTAATCAAGGAGAAGCAGAATTTCTAGCAGAAGCTAGTACTATTGGGAAGGTGAATCATATGAACTTGATAGAGATGTGGGGATATTGCTCAGAGGGAAAGCACAGGATTCTTGTTTATGAGTACATGGAGCATGGTTCCTTGGCACAAAAGTTAGCTTCCAATGTGCTTGATTGGGAGAAGAGGTTTGATATTGCTGTAGGCACTGCAAAAGGTCTAGCTTATTTGCATGAAGAGTGCTTGGAGTGGGTTTTACACTGTGATGTTAAGCCTCAAAACATATTGTTGGACTCCAATTACCAACCAAAAGTTGCAGATTTCGGCCTCTCCAAGCTACTTAACAGAGATGAGCTGAAAAATTCAAGCTTTTCAAGAATACGAGGAACCAGAGGTTACATTGCTCCAGAATGGGTGTATAATCTTCCCATCACATCCAAAGTGGATGTGTACAGCTATGGAGTGGTTGTGTTGGAGATGGTGACCGGAAAGAACCCGACAATGGTGATGGAAATGAGTGATGCTGAGCAGAGAAGACTAATTACGTGGGTGAGGGAGAAACTAAATGGAACTGATAATATTACGTCCAGGATGGGAGAGATCATAGACCCCTCATTTGAAGATAACTACGATGTCGAAAAGATGGAAATTCTGTTAACAATAGCTTTACATTGTGTTGAAGAAGACAAAGATTCACGACCAAGCATGAGTCAAGTCGTTGAGAGACTTCTACACCACGGCAAAGATTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

789

Amino Acids

88.91

Weight (kDa)

5.82

Isoelectric Point (pI)

37.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 77 - 165 4.2e-23 D-mannose binding lectin
S_locus_glycop PF00954 241 - 318 4.1e-09 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 509 - 781 1.2e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 510 - 779 7.4e-51 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1164
AasI GACNNNNNNGTC 1 cut(s) 260
AccB7I CCANNNNNTGG 1 cut(s) 237
AccI GTMKAC 1 cut(s) 656
AciI CCGC 1 cut(s) 495
AclWI GGATC 4 cut(s) 12, 420, 848, 899
AcoI YGGCCR 2 cut(s) 36, 133
AcsI RAATTY 5 cut(s) 873, 989, 1637, 1975, 2262
AcuI CTGAAG 1 cut(s) 437
AfaI GTAC 8 cut(s) 218, 800, 1073, 1142, 1608, 1657, 1742, 2066
AfeI AGCGCT 1 cut(s) 275
AfiI CCNNNNNNNGG 5 cut(s) 237, 266, 339, 914, 2116
AgsI TTSAA 9 cut(s) 145, 199, 1400, 1435, 1483, 1980, 1989, 2234, 2294
AjnI CCWGG 3 cut(s) 130, 814, 2201
AjuI GAANNNNNNNTTGG 2 cut(s) 43, 75
Alw21I GWGCWC 1 cut(s) 1506
Alw26I GTCTC 6 cut(s) 386, 511, 975, 1023, 1225, 2332
AlwI GGATC 4 cut(s) 12, 420, 848, 899
AlwNI CAGNNNCTG 1 cut(s) 894
Ama87I CYCGRG 3 cut(s) 938, 1319, 1518
Aor51HI AGCGCT 1 cut(s) 275
AoxI GGCC 6 cut(s) 36, 133, 592, 617, 1242, 1939
ApeKI GCWGC 3 cut(s) 323, 734, 1595
ApoI RAATTY 5 cut(s) 873, 989, 1637, 1975, 2262
ArsI GACNNNNNNTTYG 2 cut(s) 2213, 2245
Asp700I GAANNNNTTC 1 cut(s) 117
AspLEI GCGC 2 cut(s) 276, 1550
AspS9I GGNCC 4 cut(s) 342, 593, 618, 1243
AsuC2I CCSGG 3 cut(s) 939, 940, 1477
AsuHPI GGTGA 7 cut(s) 120, 478, 1369, 1681, 2107, 2131, 2176
AvaI CYCGRG 3 cut(s) 938, 1319, 1518
AvaII GGWCC 1 cut(s) 342
AxyI CCTNAGG 1 cut(s) 694
BaeGI GKGCMC 1 cut(s) 1200
BalI TGGCCA 1 cut(s) 38
BamHI GGATCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 1506
BarI GAAGNNNNNNTAC 2 cut(s) 2140, 2172
BbsI GAAGAC 3 cut(s) 425, 2155, 2304
Bbv12I GWGCWC 1 cut(s) 1506
BbvI GCAGC 3 cut(s) 310, 746, 1607
BceAI ACGGC 2 cut(s) 120, 665
BciT130I CCWGG 3 cut(s) 132, 816, 2203
BclI TGATCA 1 cut(s) 1582
BcnI CCSGG 3 cut(s) 939, 940, 1477
BcoDI GTCTC 6 cut(s) 386, 511, 975, 1023, 1225, 2332
BfaI CTAG 6 cut(s) 606, 672, 909, 1643, 1653, 1835
BfmI CTRYAG 4 cut(s) 99, 895, 1081, 1815
BfoI RGCGCY 1 cut(s) 277
BisI GCNGC 3 cut(s) 324, 735, 1596
BlpI GCTNAGC 2 cut(s) 1500, 2139
BlsI GCNGC 3 cut(s) 325, 736, 1597
BmcAI AGTACT 1 cut(s) 1657
Bme1390I CCNGG 6 cut(s) 132, 816, 939, 940, 1477, 2203
Bme18I GGWCC 1 cut(s) 342
BmeT110I CYCGRG 3 cut(s) 938, 1319, 1518
BmgT120I GGNCC 4 cut(s) 342, 593, 618, 1243
BmiI GGNNCC 4 cut(s) 6, 1364, 1756, 2002
BmrFI CCNGG 6 cut(s) 132, 816, 939, 940, 1477, 2203
BmsI GCATC 5 cut(s) 310, 716, 939, 1097, 2125
BpiI GAAGAC 3 cut(s) 425, 2155, 2304
BpmI CTGGAG 2 cut(s) 1013, 2004
Bpu1102I GCTNAGC 2 cut(s) 1500, 2139
BpuEI CTTGAG 2 cut(s) 1197, 1490
BpuMI CCSGG 3 cut(s) 939, 940, 1477
BsaAI YACGTR 1 cut(s) 2160
BsaI GGTCTC 1 cut(s) 975
BsaJI CCNNGG 6 cut(s) 8, 423, 938, 1285, 1758, 2350
BsaWI WCCGGW 3 cut(s) 392, 985, 2099
BsaXI ACNNNNNCTCC 6 cut(s) 1545, 1575, 1787, 1817, 2067, 2097
Bsc4I CCNNNNNNNGG 5 cut(s) 237, 266, 339, 914, 2116
Bse118I RCCGGY 2 cut(s) 149, 1354
Bse1I ACTGG 5 cut(s) 260, 304, 620, 830, 1122
Bse21I CCTNAGG 1 cut(s) 694
Bse3DI GCAATG 1 cut(s) 2013
BseBI CCWGG 3 cut(s) 132, 816, 2203
BseDI CCNNGG 6 cut(s) 8, 423, 938, 1285, 1758, 2350
BseGI GGATG 5 cut(s) 89, 246, 2048, 2065, 2211
BseLI CCNNNNNNNGG 5 cut(s) 237, 266, 339, 914, 2116
BseMI GCAATG 1 cut(s) 2013
BseMII CTCAG 5 cut(s) 588, 1220, 1491, 1722, 2130
BseNI ACTGG 5 cut(s) 260, 304, 620, 830, 1122
BseRI GAGGAG 3 cut(s) 281, 523, 1569
BseSI GKGCMC 1 cut(s) 1200
BseXI GCAGC 3 cut(s) 310, 746, 1607
BseYI CCCAGC 1 cut(s) 639
BsgI GTGCAG 1 cut(s) 354
BshFI GGCC 6 cut(s) 38, 135, 594, 619, 1244, 1941
BsiHKAI GWGCWC 1 cut(s) 1506
BsiHKCI CYCGRG 3 cut(s) 938, 1319, 1518
BsiSI CCGG 7 cut(s) 150, 393, 939, 986, 1355, 1476, 2100
BslI CCNNNNNNNGG 5 cut(s) 237, 266, 339, 914, 2116
BsmAI GTCTC 6 cut(s) 386, 511, 975, 1023, 1225, 2332
BsnI GGCC 6 cut(s) 38, 135, 594, 619, 1244, 1941
Bso31I GGTCTC 1 cut(s) 975
BsoBI CYCGRG 3 cut(s) 938, 1319, 1518
Bsp1286I GDGCHC 2 cut(s) 1200, 1506
Bsp1407I TGTACA 2 cut(s) 798, 2064
Bsp143I GATC 7 cut(s) 4, 412, 853, 904, 1315, 1582, 2214
Bsp1720I GCTNAGC 2 cut(s) 1500, 2139
BspACI CCGC 1 cut(s) 495
BspANI GGCC 6 cut(s) 38, 135, 594, 619, 1244, 1941
BspCNI CTCAG 5 cut(s) 589, 1221, 1492, 1721, 2131
BspLI GGNNCC 4 cut(s) 6, 1364, 1756, 2002
BspPI GGATC 4 cut(s) 12, 420, 848, 899
BspQI GCTCTTC 1 cut(s) 557
BspTNI GGTCTC 1 cut(s) 975
BsrDI GCAATG 1 cut(s) 2013
BsrFI RCCGGY 2 cut(s) 149, 1354
BsrGI TGTACA 2 cut(s) 798, 2064
BsrI ACTGG 5 cut(s) 260, 304, 620, 830, 1122
BssAI RCCGGY 2 cut(s) 149, 1354
BssECI CCNNGG 6 cut(s) 8, 423, 938, 1285, 1758, 2350
BssMI GATC 7 cut(s) 4, 412, 853, 904, 1315, 1582, 2214
BssT1I CCWWGG 3 cut(s) 423, 1285, 1758
Bst2UI CCWGG 3 cut(s) 132, 816, 2203
Bst4CI ACNGT 3 cut(s) 803, 890, 1877
Bst6I CTCTTC 4 cut(s) 557, 1537, 1793, 1845
BstAUI TGTACA 2 cut(s) 798, 2064
BstBAI YACGTR 1 cut(s) 2160
BstC8I GCNNGC 2 cut(s) 151, 843
BstDEI CTNAG 8 cut(s) 597, 694, 1034, 1229, 1500, 1708, 2139, 2364
BstDSI CCRYGG 1 cut(s) 2350
BstEII GGTNACC 1 cut(s) 2095
BstF5I GGATG 5 cut(s) 89, 246, 2048, 2065, 2211
BstH2I RGCGCY 1 cut(s) 277
BstHHI GCGC 2 cut(s) 276, 1550
BstKTI GATC 7 cut(s) 7, 415, 856, 907, 1318, 1585, 2217
BstMAI GTCTC 6 cut(s) 386, 511, 975, 1023, 1225, 2332
BstMBI GATC 7 cut(s) 4, 412, 853, 904, 1315, 1582, 2214
BstMWI GCNNNNNNNGC 3 cut(s) 280, 1195, 1469
BstNI CCWGG 3 cut(s) 132, 816, 2203
BstPI GGTNACC 1 cut(s) 2095
BstSCI CCNGG 6 cut(s) 130, 814, 937, 938, 1475, 2201
BstSFI CTRYAG 4 cut(s) 99, 895, 1081, 1815
BstSLI GKGCMC 1 cut(s) 1200
BstV1I GCAGC 3 cut(s) 310, 746, 1607
BstV2I GAAGAC 3 cut(s) 425, 2155, 2304
BstX2I RGATCY 2 cut(s) 4, 412
BstYI RGATCY 2 cut(s) 4, 412
Bsu36I CCTNAGG 1 cut(s) 694
BsuRI GGCC 6 cut(s) 38, 135, 594, 619, 1244, 1941
BtgI CCRYGG 1 cut(s) 2350
BtsCI GGATG 5 cut(s) 89, 246, 2048, 2065, 2211
BtsI GCAGTG 1 cut(s) 1821
BtsIMutI CAGTG 4 cut(s) 895, 1534, 1821, 1873
Cac8I GCNNGC 2 cut(s) 151, 843
CaiI CAGNNNCTG 1 cut(s) 894
CfoI GCGC 2 cut(s) 276, 1550
Cfr10I RCCGGY 2 cut(s) 149, 1354
Cfr13I GGNCC 4 cut(s) 342, 593, 618, 1243
Cfr9I CCCGGG 1 cut(s) 938
CseI GACGC 1 cut(s) 1189
Csp6I GTAC 8 cut(s) 217, 799, 1072, 1141, 1607, 1656, 1741, 2065
CviAII CATG 8 cut(s) 837, 858, 930, 1454, 1744, 1751, 1847, 2320
CviQI GTAC 8 cut(s) 217, 799, 1072, 1141, 1607, 1656, 1741, 2065
DdeI CTNAG 8 cut(s) 597, 694, 1034, 1229, 1500, 1708, 2139, 2364
DpnI GATC 7 cut(s) 6, 414, 855, 906, 1317, 1584, 2216
DpnII GATC 7 cut(s) 4, 412, 853, 904, 1315, 1582, 2214
DrdI GACNNNNNNGTC 1 cut(s) 260
DseDI GACNNNNNNGTC 1 cut(s) 260
EaeI YGGCCR 2 cut(s) 36, 133
Eam1104I CTCTTC 4 cut(s) 557, 1537, 1793, 1845
EarI CTCTTC 4 cut(s) 557, 1537, 1793, 1845
Ecl136II GAGCTC 1 cut(s) 1504
Eco130I CCWWGG 3 cut(s) 423, 1285, 1758
Eco24I GRGCYC 1 cut(s) 1506
Eco31I GGTCTC 1 cut(s) 975
Eco47I GGWCC 1 cut(s) 342
Eco47III AGCGCT 1 cut(s) 275
Eco53kI GAGCTC 1 cut(s) 1504
Eco57I CTGAAG 1 cut(s) 437
Eco81I CCTNAGG 1 cut(s) 694
Eco88I CYCGRG 3 cut(s) 938, 1319, 1518
Eco91I GGTNACC 1 cut(s) 2095
EcoICRI GAGCTC 1 cut(s) 1504
EcoO65I GGTNACC 1 cut(s) 2095
EcoRI GAATTC 1 cut(s) 989
EcoRII CCWGG 3 cut(s) 130, 814, 2201
EcoT14I CCWWGG 3 cut(s) 423, 1285, 1758
EcoT38I GRGCYC 1 cut(s) 1506
ErhI CCWWGG 3 cut(s) 423, 1285, 1758
FaeI CATG 8 cut(s) 840, 861, 933, 1457, 1747, 1754, 1850, 2323
FalI AAGNNNNNCTT 4 cut(s) 539, 571, 643, 675
FatI CATG 8 cut(s) 836, 857, 929, 1453, 1743, 1750, 1846, 2319
FauNDI CATATG 2 cut(s) 631, 1677
FbaI TGATCA 1 cut(s) 1582
FblI GTMKAC 1 cut(s) 656
Fnu4HI GCNGC 3 cut(s) 324, 735, 1596
FokI GGATG 5 cut(s) 76, 253, 2035, 2072, 2218
FriOI GRGCYC 1 cut(s) 1506
Fsp4HI GCNGC 3 cut(s) 324, 735, 1596
FspBI CTAG 6 cut(s) 606, 672, 909, 1643, 1653, 1835
GlaI GCGC 2 cut(s) 275, 1549
GluI GCNGC 3 cut(s) 324, 735, 1596
GsaI CCCAGC 1 cut(s) 643
GsuI CTGGAG 2 cut(s) 1013, 2004
HaeII RGCGCY 1 cut(s) 277
HaeIII GGCC 6 cut(s) 38, 135, 594, 619, 1244, 1941
HapII CCGG 7 cut(s) 150, 393, 939, 986, 1355, 1476, 2100
HgaI GACGC 1 cut(s) 1189
HhaI GCGC 2 cut(s) 276, 1550
Hin1II CATG 8 cut(s) 840, 861, 933, 1457, 1747, 1754, 1850, 2323
Hin6I GCGC 2 cut(s) 274, 1548
HinP1I GCGC 2 cut(s) 274, 1548
HincII GTYRAC 4 cut(s) 265, 768, 983, 2271
HindII GTYRAC 4 cut(s) 265, 768, 983, 2271
HindIII AAGCTT 2 cut(s) 281, 1981
HpaI GTTAAC 1 cut(s) 2271
HpaII CCGG 7 cut(s) 150, 393, 939, 986, 1355, 1476, 2100
HphI GGTGA 7 cut(s) 120, 478, 1369, 1681, 2107, 2131, 2176
Hpy166II GTNNAC 8 cut(s) 265, 657, 768, 983, 1143, 1564, 2065, 2271
Hpy188I TCNGA 8 cut(s) 70, 211, 417, 715, 853, 948, 1230, 1711
Hpy188III TCNNGA 9 cut(s) 238, 251, 806, 1319, 1321, 1507, 1989, 2021, 2310
Hpy8I GTNNAC 8 cut(s) 265, 657, 768, 983, 1143, 1564, 2065, 2271
HpyAV CCTTC 8 cut(s) 77, 476, 493, 756, 944, 1004, 1234, 1660
HpyCH4III ACNGT 3 cut(s) 803, 890, 1877
HpyCH4IV ACGT 4 cut(s) 336, 373, 2159, 2198
HpyF10VI GCNNNNNNNGC 3 cut(s) 280, 1195, 1469
HpyF3I CTNAG 8 cut(s) 597, 694, 1034, 1229, 1500, 1708, 2139, 2364
HpySE526I ACGT 4 cut(s) 336, 373, 2159, 2198
Hsp92II CATG 8 cut(s) 840, 861, 933, 1457, 1747, 1754, 1850, 2323
HspAI GCGC 2 cut(s) 274, 1548
KroI GCCGGC 1 cut(s) 149
KroNI GCCGGC 1 cut(s) 151
Ksp22I TGATCA 1 cut(s) 1582
KspAI GTTAAC 1 cut(s) 2271
Kzo9I GATC 7 cut(s) 4, 412, 853, 904, 1315, 1582, 2214
LguI GCTCTTC 1 cut(s) 557
LmnI GCTCC 3 cut(s) 881, 1747, 2023
Lsp1109I GCAGC 3 cut(s) 310, 746, 1607
LweI GCATC 5 cut(s) 310, 716, 939, 1097, 2125
MaeI CTAG 6 cut(s) 606, 672, 909, 1643, 1653, 1835
MaeII ACGT 4 cut(s) 336, 373, 2159, 2198
MaeIII GTNAC 6 cut(s) 251, 832, 1217, 1465, 2009, 2095
MalI GATC 7 cut(s) 6, 414, 855, 906, 1317, 1584, 2216
MboI GATC 7 cut(s) 4, 412, 853, 904, 1315, 1582, 2214
MflI RGATCY 2 cut(s) 4, 412
MhlI GDGCHC 2 cut(s) 1200, 1506
MlsI TGGCCA 1 cut(s) 38
MluNI TGGCCA 1 cut(s) 38
MlyI GAGTC 8 cut(s) 206, 383, 443, 1025, 1353, 1510, 1901, 2332
MmeI TCCRAC 5 cut(s) 74, 93, 502, 1884, 2067
Mox20I TGGCCA 1 cut(s) 38
MroNI GCCGGC 1 cut(s) 149
MroXI GAANNNNTTC 1 cut(s) 117
MscI TGGCCA 1 cut(s) 38
MseI TTAA 8 cut(s) 314, 377, 1292, 1335, 1602, 1884, 1956, 2270
MslI CAYNNNNRTG 2 cut(s) 1458, 1878
Msp20I TGGCCA 1 cut(s) 38
MspA1I CMGCKG 2 cut(s) 737, 1203
MspI CCGG 7 cut(s) 150, 393, 939, 986, 1355, 1476, 2100
MspR9I CCNGG 6 cut(s) 132, 816, 939, 940, 1477, 2203
MvaI CCWGG 3 cut(s) 132, 816, 2203
MwoI GCNNNNNNNGC 3 cut(s) 280, 1195, 1469
NaeI GCCGGC 1 cut(s) 151
NciI CCSGG 3 cut(s) 939, 940, 1477
NdeI CATATG 2 cut(s) 631, 1677
NdeII GATC 7 cut(s) 4, 412, 853, 904, 1315, 1582, 2214
NgoMIV GCCGGC 1 cut(s) 149
NlaIII CATG 8 cut(s) 840, 861, 933, 1457, 1747, 1754, 1850, 2323
NlaIV GGNNCC 4 cut(s) 6, 1364, 1756, 2002
NmuCI GTSAC 3 cut(s) 251, 832, 2095
PaeR7I CTCGAG 1 cut(s) 1319
PciSI GCTCTTC 1 cut(s) 557
PdiI GCCGGC 1 cut(s) 151
PdmI GAANNNNTTC 1 cut(s) 117
PfeI GAWTC 6 cut(s) 689, 865, 1672, 1726, 2306, 2360
PflMI CCANNNNNTGG 1 cut(s) 237
PfoI TCCNGGA 1 cut(s) 2201
PkrI GCNGC 3 cut(s) 325, 736, 1597
PleI GAGTC 8 cut(s) 206, 383, 443, 1024, 1352, 1510, 1901, 2331
PpsI GAGTC 8 cut(s) 206, 383, 443, 1024, 1352, 1510, 1901, 2331
Ppu21I YACGTR 1 cut(s) 2160
PsiI TTATAA 1 cut(s) 1164
Psp124BI GAGCTC 1 cut(s) 1506
Psp6I CCWGG 3 cut(s) 130, 814, 2201
PspEI GGTNACC 1 cut(s) 2095
PspFI CCCAGC 1 cut(s) 639
PspGI CCWGG 3 cut(s) 130, 814, 2201
PspN4I GGNNCC 4 cut(s) 6, 1364, 1756, 2002
PspPI GGNCC 4 cut(s) 342, 593, 618, 1243
PsrI GAACNNNNNNTAC 2 cut(s) 910, 942
PstNI CAGNNNCTG 1 cut(s) 894
PsuI RGATCY 2 cut(s) 4, 412
PvuII CAGCTG 2 cut(s) 737, 1203
RsaI GTAC 8 cut(s) 218, 800, 1073, 1142, 1608, 1657, 1742, 2066
RsaNI GTAC 8 cut(s) 217, 799, 1072, 1141, 1607, 1656, 1741, 2065
RseI CAYNNNNRTG 2 cut(s) 1458, 1878
SacI GAGCTC 1 cut(s) 1506
SapI GCTCTTC 1 cut(s) 557
SaqAI TTAA 8 cut(s) 314, 377, 1292, 1335, 1602, 1884, 1956, 2270
SatI GCNGC 3 cut(s) 324, 735, 1596
Sau3AI GATC 7 cut(s) 4, 412, 853, 904, 1315, 1582, 2214
Sau96I GGNCC 4 cut(s) 342, 593, 618, 1243
ScaI AGTACT 1 cut(s) 1657
SchI GAGTC 8 cut(s) 206, 383, 443, 1025, 1353, 1510, 1901, 2332
ScrFI CCNGG 6 cut(s) 132, 816, 939, 940, 1477, 2203
SduI GDGCHC 2 cut(s) 1200, 1506
SfaNI GCATC 5 cut(s) 310, 716, 939, 1097, 2125
SfcI CTRYAG 4 cut(s) 99, 895, 1081, 1815
Sfr274I CTCGAG 1 cut(s) 1319
SinI GGWCC 1 cut(s) 342
SlaI CTCGAG 1 cut(s) 1319
SmaI CCCGGG 1 cut(s) 940
SmiMI CAYNNNNRTG 2 cut(s) 1458, 1878
SmlI CTYRAG 3 cut(s) 1212, 1319, 1505
SmoI CTYRAG 3 cut(s) 1212, 1319, 1505
SsiI CCGC 1 cut(s) 495
SspI AATATT 1 cut(s) 2194
SspMI CTAG 6 cut(s) 606, 672, 909, 1643, 1653, 1835
SstI GAGCTC 1 cut(s) 1506
StyD4I CCNGG 6 cut(s) 130, 814, 937, 938, 1475, 2201
StyI CCWWGG 3 cut(s) 423, 1285, 1758
TaaI ACNGT 3 cut(s) 803, 890, 1877
TaiI ACGT 4 cut(s) 339, 376, 2162, 2201
TaqI TCGA 5 cut(s) 558, 793, 1320, 1342, 2250
TatI WGTACW 5 cut(s) 798, 1140, 1655, 1740, 2064
TfiI GAWTC 6 cut(s) 689, 865, 1672, 1726, 2306, 2360
Tru1I TTAA 8 cut(s) 314, 377, 1292, 1335, 1602, 1884, 1956, 2270
Tru9I TTAA 8 cut(s) 314, 377, 1292, 1335, 1602, 1884, 1956, 2270
TscAI CASTG 4 cut(s) 895, 1534, 1828, 1880
TseFI GTSAC 3 cut(s) 251, 832, 2095
TseI GCWGC 3 cut(s) 323, 734, 1595
Tsp45I GTSAC 3 cut(s) 251, 832, 2095
TspDTI ATGAA 7 cut(s) 45, 146, 918, 1292, 1442, 1694, 1863
TspGWI ACGGA 1 cut(s) 885
TspMI CCCGGG 1 cut(s) 938
TspRI CASTG 4 cut(s) 895, 1534, 1828, 1880
Van91I CCANNNNNTGG 1 cut(s) 237
VpaK11BI GGWCC 1 cut(s) 342
XapI RAATTY 5 cut(s) 873, 989, 1637, 1975, 2262
XcmI CCANNNNNNNNNTGG 3 cut(s) 238, 822, 1001
XhoI CTCGAG 1 cut(s) 1319
XmaI CCCGGG 1 cut(s) 938
XmiI GTMKAC 1 cut(s) 656
XmnI GAANNNNTTC 1 cut(s) 117
XspI CTAG 6 cut(s) 606, 672, 909, 1643, 1653, 1835
ZrmI AGTACT 1 cut(s) 1657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.