RchiOBHm_Chr3g0465001

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000166
Physical Location & Seq
Reverse (-)
11910245 .. 11913529
3285 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43118

Sequence Viewer

Length: 2079 bp
ATGGAAGTTCCCAAGTTTATTCTTGTTTTGCTATTTGCAGCAACCTTTGCTTGGAGTCGAGCACAGTTAGAAGGGATGCCAAGCTTAAAGCAAGGGAACTCCTTGAAAGTTGAGGAAGAGAGCAACTTCTTGGTTTCACCAAATGGAACCTTTTCGAGCGGATTTTACAAAGTTGGCGCCAATGCCTCCTGTTATTCAATATGGTTCACAAATAGTGCCGACAAAACAGTTGTCTGGATGCCTAATCGAGATAAGCCTGTCAGCGAAAGACGCTCGAAGCTAACCCTCCATGGAAATGGCAACCTAGTTTTGACTGATGCACTAGGTTCGGTTGTGTGGTCAACCAACACAATCTCTAAGGAAGACATGGAACTTCAGCTTCTTGAAACAGGAAACTTGGTGCTGAGTAACCAAGACGACAGGATCATCTGGCAGAGTTTTGATTCTCCAACGGATACACTTCTGCCATCTCAGCCACTCACCAAGAACACAACCTTAGTGTCCATGAGAGGCCAAGGTACATACTTATCTGGATTCTATAACTTCAAGTTCGATGATAACAGTATCTTGTTTCTCATCTACAATGGCCCTCTACTTTCTAGTGTTTATTGGCCCCAGATTGTTTCAACTGTTTTTGAAAGTGGTAGAAATCCTTACAACAGCTCTAGAGTGGCAATTTTAGATGTGGCTGGACAATTTATATCTAGTGACAATATGCAGTTCTATGCATCTGACTATGGGGTTGGTCCAAAGCGGCGTTTAACAATGGATTATGATGGCATCGTAAGATTGTACAGTCTTGATGACTCAACTGGGAATTGGAAACTGTCATGGTTGCCTGATGGTGAATTCTTGCCTAGTGGATTCGAGATGCTTGGGATTCGGATATGCGCTGGTCGGATTGGACAATGTTACCCTAAGAGTCTTCTGCTTAATGGATACCGTATGTCAAATGTTAAGAGCATCTTGTATGTTAAGATTCGAAAAGATTTTCTGACCCCTGGTGCAGTCCAAAGCAAACTAGAAGCACATGATTTGAGTTGTTCCGCAGCACAGTTTTTTGTAAGTTGTGATCTTGAAACAGAAAAGGGCAATGGAAATCAGTATATGAAATACCTTATCGGAGTTGTGAGTTCCTTTGCAATAATTGAAGCAATCTGCATTGGTTTGGCATGGTGGTATGTGTTCCGAAAACAAGCTCATGAGGAACTGGTGAGCATGGGTTACATGACATTAGCCATAAATGCTGTAGGATTTAAACATTTCACCTATGCAGAACTAAAGAAAGCAACCAATGACTTCAAACAGGAGATAGGAAAAGGAAGGTTCGGAACAGTCTATAAAGGGGTTCTGGATGGTGAAAGATTTGTAGCTGTGAAGAGATTAGAAGGCATTCTGCAAGGAGATGCCGAATTTTGGGCAGAGGTGAGTGTAATAGGGAATATCAATCATATGAACTTGGTTAAACTATATGGTTTCTGTGCGGATAATAATCATAAGCTATTGGTGTATGAGTACCTGGAGAATGGATCCTTGGATAAACTCTTGTTCTCAGAAGTTGAACTTGGATTGGAAAAGCGGTACAAGATTGCATTAGGCACCGCAAAGGGTTTGTCATATCTACATGAGGAGTGCCTTGAATGGGTACTCCACTGTGATGTAAAGCCTCAAAATATACTGTTAGACGACCATCTTGAACCTAAGGTGGCAGATTTTGGTATGTCCAAGTTGTTCAAAGACATTAATGATGAAGGCAATGGATTTTCTAGAGTTCGAGGTACCAGAGGTTATATGGCTCCAGACTATGGGATTGTTCTGTTGGAGCTACTGACTGGAAAGAGTGCTTCTATTCTGCTTTCAGCTTTTGCACGAGAGTACATTGAACACAACCAACTGGTACAATGTGTGACTGAAAAGATCAGAGTCGAAGGGATTAAGGAAGTGATAGATCTGCGACTTCATCATGATTTCAACAAAAAGAAGCTTGAAAGATTGATGAAGGTTGCTCTTTTGTGTGTACAAGAAGATCGAAGTGCAAGACCTGCCATGAGTAAGGTGGTGGAGCTTCTACTTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

692

Amino Acids

77.91

Weight (kDa)

6.14

Isoelectric Point (pI)

31.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 164 1.8e-25 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 434 - 689 2.5e-31 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 435 - 601 1e-36 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2050
Acc65I GGTACC 1 cut(s) 1778
AccB1I GGYRCC 3 cut(s) 176, 1598, 1778
AccB7I CCANNNNNTGG 1 cut(s) 1805
AccBSI CCGCTC 1 cut(s) 159
AciI CCGC 6 cut(s) 159, 754, 1047, 1484, 1579, 1602
AclWI GGATC 3 cut(s) 431, 1524, 1537
AcsI RAATTY 2 cut(s) 848, 1412
AcuI CTGAAG 1 cut(s) 359
AcyI GRCGYC 1 cut(s) 177
AfaI GTAC 9 cut(s) 520, 794, 1517, 1583, 1647, 1780, 1877, 1899, 2019
AfiI CCNNNNNNNGG 4 cut(s) 51, 1416, 1642, 1805
AjnI CCWGG 2 cut(s) 1000, 1518
AjuI GAANNNNNNNTTGG 4 cut(s) 1517, 1548, 1549, 1580
Alw21I GWGCWC 1 cut(s) 64
AlwI GGATC 3 cut(s) 431, 1524, 1537
AoxI GGCC 3 cut(s) 511, 586, 611
ApeKI GCWGC 2 cut(s) 38, 1049
ApoI RAATTY 2 cut(s) 848, 1412
ArsI GACNNNNNNTTYG 4 cut(s) 216, 248, 1598, 1630
AseI ATTAAT 1 cut(s) 1743
Asp700I GAANNNNTTC 2 cut(s) 151, 1392
Asp718I GGTACC 1 cut(s) 1778
AspLEI GCGC 2 cut(s) 179, 893
AspS9I GGNCC 3 cut(s) 587, 612, 746
AsuHPI GGTGA 7 cut(s) 129, 472, 857, 1225, 1258, 1370, 1438
AsuII TTCGAA 1 cut(s) 982
AvaII GGWCC 1 cut(s) 746
AxyI CCTNAGG 1 cut(s) 1701
BamHI GGATCC 1 cut(s) 1529
BanI GGYRCC 3 cut(s) 176, 1598, 1778
BauI CACGAG 1 cut(s) 1869
BbsI GAAGAC 2 cut(s) 369, 917
Bbv12I GWGCWC 1 cut(s) 64
BbvI GCAGC 2 cut(s) 50, 1061
BccI CCATC 5 cut(s) 475, 770, 836, 1349, 1698
BcgI CGANNNNNNTGC 2 cut(s) 309, 343
BciT130I CCWGG 2 cut(s) 1002, 1520
BciVI GTATCC 2 cut(s) 448, 932
BfaI CTAG 8 cut(s) 305, 323, 600, 666, 705, 858, 1022, 1767
BfmI CTRYAG 1 cut(s) 1248
BfoI RGCGCY 1 cut(s) 180
BfuAI ACCTGC 1 cut(s) 2050
BfuI GTATCC 2 cut(s) 448, 932
BglII AGATCT 1 cut(s) 1948
BisI GCNGC 3 cut(s) 39, 755, 1050
BlsI GCNGC 3 cut(s) 40, 756, 1051
Bme1390I CCNGG 2 cut(s) 1002, 1520
Bme18I GGWCC 1 cut(s) 746
BmgT120I GGNCC 3 cut(s) 587, 612, 746
BmiI GGNNCC 7 cut(s) 148, 178, 614, 1531, 1600, 1780, 1797
BmrFI CCNGG 2 cut(s) 1002, 1520
BmrI ACTGGG 1 cut(s) 822
BmsI GCATC 8 cut(s) 66, 228, 307, 737, 789, 861, 972, 1396
BmuI ACTGGG 1 cut(s) 822
BpiI GAAGAC 2 cut(s) 369, 917
BpmI CTGGAG 2 cut(s) 1541, 1782
Bpu14I TTCGAA 1 cut(s) 982
BsaBI GATNNNNATC 1 cut(s) 1491
BsaHI GRCGYC 1 cut(s) 177
BsaJI CCNNGG 4 cut(s) 289, 514, 1000, 1533
Bsc4I CCNNNNNNNGG 4 cut(s) 51, 1416, 1642, 1805
Bse1I ACTGG 4 cut(s) 817, 1215, 1837, 1899
Bse21I CCTNAGG 1 cut(s) 1701
Bse3DI GCAATG 2 cut(s) 1099, 1762
Bse8I GATNNNNATC 1 cut(s) 1491
BseBI CCWGG 2 cut(s) 1002, 1520
BseDI CCNNGG 4 cut(s) 289, 514, 1000, 1533
BseGI GGATG 3 cut(s) 81, 243, 1360
BseJI GATNNNNATC 1 cut(s) 1491
BseLI CCNNNNNNNGG 4 cut(s) 51, 1416, 1642, 1805
BseMI GCAATG 2 cut(s) 1099, 1762
BseMII CTCAG 3 cut(s) 395, 485, 1566
BseNI ACTGG 4 cut(s) 817, 1215, 1837, 1899
BseRI GAGGAG 1 cut(s) 1643
BseXI GCAGC 2 cut(s) 50, 1061
BsgI GTGCAG 1 cut(s) 1026
BshFI GGCC 3 cut(s) 513, 588, 613
BshNI GGYRCC 3 cut(s) 176, 1598, 1778
BsiHKAI GWGCWC 1 cut(s) 64
BslI CCNNNNNNNGG 4 cut(s) 51, 1416, 1642, 1805
BsmI GAATGC 1 cut(s) 1392
BsnI GGCC 3 cut(s) 513, 588, 613
Bsp119I TTCGAA 1 cut(s) 982
Bsp1286I GDGCHC 1 cut(s) 64
Bsp1407I TGTACA 2 cut(s) 792, 2017
Bsp143I GATC 6 cut(s) 423, 1072, 1529, 1917, 1948, 2026
Bsp19I CCATGG 1 cut(s) 289
BspACI CCGC 6 cut(s) 159, 754, 1047, 1484, 1579, 1602
BspANI GGCC 3 cut(s) 513, 588, 613
BspCNI CTCAG 3 cut(s) 396, 484, 1565
BspHI TCATGA 2 cut(s) 1201, 1963
BspLI GGNNCC 7 cut(s) 148, 178, 614, 1531, 1600, 1780, 1797
BspMI ACCTGC 1 cut(s) 2050
BspPI GGATC 3 cut(s) 431, 1524, 1537
BspT104I TTCGAA 1 cut(s) 982
BspT107I GGYRCC 3 cut(s) 176, 1598, 1778
BsrBI CCGCTC 1 cut(s) 159
BsrDI GCAATG 2 cut(s) 1099, 1762
BsrGI TGTACA 2 cut(s) 792, 2017
BsrI ACTGG 4 cut(s) 817, 1215, 1837, 1899
BssECI CCNNGG 4 cut(s) 289, 514, 1000, 1533
BssMI GATC 6 cut(s) 423, 1072, 1529, 1917, 1948, 2026
BssNI GRCGYC 1 cut(s) 177
BssSI CACGAG 1 cut(s) 1869
BssT1I CCWWGG 3 cut(s) 289, 514, 1533
Bst2BI CACGAG 1 cut(s) 1869
Bst2UI CCWGG 2 cut(s) 1002, 1520
Bst6I CTCTTC 2 cut(s) 111, 1373
BstACI GRCGYC 1 cut(s) 177
BstAPI GCANNNNNTGC 2 cut(s) 47, 2042
BstAUI TGTACA 2 cut(s) 792, 2017
BstBI TTCGAA 1 cut(s) 982
BstDEI CTNAG 7 cut(s) 357, 404, 471, 496, 918, 1552, 1701
BstDSI CCRYGG 1 cut(s) 289
BstF5I GGATG 3 cut(s) 81, 243, 1360
BstH2I RGCGCY 1 cut(s) 180
BstHHI GCGC 2 cut(s) 179, 893
BstKTI GATC 6 cut(s) 426, 1075, 1532, 1920, 1951, 2029
BstMBI GATC 6 cut(s) 423, 1072, 1529, 1917, 1948, 2026
BstMWI GCNNNNNNNGC 5 cut(s) 47, 270, 472, 1244, 2042
BstNI CCWGG 2 cut(s) 1002, 1520
BstSCI CCNGG 2 cut(s) 1000, 1518
BstSFI CTRYAG 1 cut(s) 1248
BstV1I GCAGC 2 cut(s) 50, 1061
BstV2I GAAGAC 2 cut(s) 369, 917
BstX2I RGATCY 2 cut(s) 1529, 1948
BstXI CCANNNNNNTGG 1 cut(s) 296
BstYI RGATCY 2 cut(s) 1529, 1948
Bsu36I CCTNAGG 1 cut(s) 1701
BsuI GTATCC 2 cut(s) 448, 932
BsuRI GGCC 3 cut(s) 513, 588, 613
BtgI CCRYGG 1 cut(s) 289
BtsCI GGATG 3 cut(s) 81, 243, 1360
BtsIMutI CAGTG 1 cut(s) 1651
BveI ACCTGC 1 cut(s) 2050
CciI TCATGA 2 cut(s) 1201, 1963
CfoI GCGC 2 cut(s) 179, 893
Cfr13I GGNCC 3 cut(s) 587, 612, 746
CseI GACGC 1 cut(s) 279
Csp6I GTAC 9 cut(s) 519, 793, 1516, 1582, 1646, 1779, 1876, 1898, 2018
CviQI GTAC 9 cut(s) 519, 793, 1516, 1582, 1646, 1779, 1876, 1898, 2018
DdeI CTNAG 7 cut(s) 357, 404, 471, 496, 918, 1552, 1701
DinI GGCGCC 1 cut(s) 178
DpnI GATC 6 cut(s) 425, 1074, 1531, 1919, 1950, 2028
DpnII GATC 6 cut(s) 423, 1072, 1529, 1917, 1948, 2026
DraI TTTAAA 1 cut(s) 1258
Eam1104I CTCTTC 2 cut(s) 111, 1373
EarI CTCTTC 2 cut(s) 111, 1373
Eco130I CCWWGG 3 cut(s) 289, 514, 1533
Eco47I GGWCC 1 cut(s) 746
Eco57I CTGAAG 1 cut(s) 359
Eco81I CCTNAGG 1 cut(s) 1701
EcoRI GAATTC 1 cut(s) 848
EcoRII CCWGG 2 cut(s) 1000, 1518
EcoT14I CCWWGG 3 cut(s) 289, 514, 1533
EcoT22I ATGCAT 1 cut(s) 730
EgeI GGCGCC 1 cut(s) 178
EheI GGCGCC 1 cut(s) 178
ErhI CCWWGG 3 cut(s) 289, 514, 1533
FalI AAGNNNNNCTT 4 cut(s) 950, 982, 1548, 1580
FauNDI CATATG 1 cut(s) 1452
Fnu4HI GCNGC 3 cut(s) 39, 755, 1050
FokI GGATG 3 cut(s) 88, 250, 1367
Fsp4HI GCNGC 3 cut(s) 39, 755, 1050
FspBI CTAG 8 cut(s) 305, 323, 600, 666, 705, 858, 1022, 1767
GlaI GCGC 2 cut(s) 178, 892
GluI GCNGC 3 cut(s) 39, 755, 1050
GsuI CTGGAG 2 cut(s) 1541, 1782
HaeII RGCGCY 1 cut(s) 180
HaeIII GGCC 3 cut(s) 513, 588, 613
HgaI GACGC 1 cut(s) 279
HhaI GCGC 2 cut(s) 179, 893
Hin1I GRCGYC 1 cut(s) 177
Hin6I GCGC 2 cut(s) 177, 891
HinP1I GCGC 2 cut(s) 177, 891
HincII GTYRAC 1 cut(s) 342
HindII GTYRAC 1 cut(s) 342
HindIII AAGCTT 2 cut(s) 82, 1982
HinfI GANTC 9 cut(s) 55, 443, 534, 806, 864, 880, 922, 979, 1923
HphI GGTGA 7 cut(s) 129, 472, 857, 1225, 1258, 1370, 1438
Hpy166II GTNNAC 3 cut(s) 207, 342, 2018
Hpy188I TCNGA 9 cut(s) 733, 885, 900, 996, 1124, 1190, 1331, 1555, 1922
Hpy8I GTNNAC 3 cut(s) 207, 342, 2018
HpyAV CCTTC 6 cut(s) 65, 1317, 1382, 1745, 1922, 1993
HpyF10VI GCNNNNNNNGC 5 cut(s) 47, 270, 472, 1244, 2042
HpyF3I CTNAG 7 cut(s) 357, 404, 471, 496, 918, 1552, 1701
Hsp92I GRCGYC 1 cut(s) 177
HspAI GCGC 2 cut(s) 177, 891
KasI GGCGCC 1 cut(s) 176
KpnI GGTACC 1 cut(s) 1782
Kzo9I GATC 6 cut(s) 423, 1072, 1529, 1917, 1948, 2026
LmnI GCTCC 3 cut(s) 1801, 1822, 2062
Lsp1109I GCAGC 2 cut(s) 50, 1061
LweI GCATC 8 cut(s) 66, 228, 307, 737, 789, 861, 972, 1396
MaeI CTAG 8 cut(s) 305, 323, 600, 666, 705, 858, 1022, 1767
MaeIII GTNAC 5 cut(s) 407, 707, 911, 1223, 1906
MalI GATC 6 cut(s) 425, 1074, 1531, 1919, 1950, 2028
MbiI CCGCTC 1 cut(s) 159
MboI GATC 6 cut(s) 423, 1072, 1529, 1917, 1948, 2026
MboII GAAGA 5 cut(s) 128, 374, 917, 1390, 2036
MflI RGATCY 2 cut(s) 1529, 1948
MhlI GDGCHC 1 cut(s) 64
MluCI AATT 6 cut(s) 675, 695, 817, 848, 1146, 1412
Mly113I GGCGCC 1 cut(s) 177
MlyI GAGTC 4 cut(s) 64, 800, 931, 1932
MmeI TCCRAC 3 cut(s) 473, 878, 1800
Mph1103I ATGCAT 1 cut(s) 730
MroXI GAANNNNTTC 2 cut(s) 151, 1392
MseI TTAA 9 cut(s) 86, 761, 933, 957, 975, 1257, 1464, 1743, 1935
MslI CAYNNNNRTG 2 cut(s) 294, 1656
MspR9I CCNGG 2 cut(s) 1002, 1520
Mva1269I GAATGC 1 cut(s) 1392
MvaI CCWGG 2 cut(s) 1002, 1520
MwoI GCNNNNNNNGC 5 cut(s) 47, 270, 472, 1244, 2042
NarI GGCGCC 1 cut(s) 177
NcoI CCATGG 1 cut(s) 289
NdeI CATATG 1 cut(s) 1452
NdeII GATC 6 cut(s) 423, 1072, 1529, 1917, 1948, 2026
NlaIV GGNNCC 7 cut(s) 148, 178, 614, 1531, 1600, 1780, 1797
NmuCI GTSAC 2 cut(s) 707, 1906
NsiI ATGCAT 1 cut(s) 730
NspV TTCGAA 1 cut(s) 982
PagI TCATGA 2 cut(s) 1201, 1963
PctI GAATGC 1 cut(s) 1392
PdmI GAANNNNTTC 2 cut(s) 151, 1392
PfeI GAWTC 5 cut(s) 443, 534, 864, 880, 979
PflMI CCANNNNNTGG 1 cut(s) 1805
PkrI GCNGC 3 cut(s) 40, 756, 1051
PleI GAGTC 4 cut(s) 63, 800, 930, 1931
PluTI GGCGCC 1 cut(s) 180
PpsI GAGTC 4 cut(s) 63, 800, 930, 1931
PshBI ATTAAT 1 cut(s) 1743
Psp6I CCWGG 2 cut(s) 1000, 1518
PspGI CCWGG 2 cut(s) 1000, 1518
PspN4I GGNNCC 7 cut(s) 148, 178, 614, 1531, 1600, 1780, 1797
PspPI GGNCC 3 cut(s) 587, 612, 746
PsuI RGATCY 2 cut(s) 1529, 1948
RsaI GTAC 9 cut(s) 520, 794, 1517, 1583, 1647, 1780, 1877, 1899, 2019
RsaNI GTAC 9 cut(s) 519, 793, 1516, 1582, 1646, 1779, 1876, 1898, 2018
RseI CAYNNNNRTG 2 cut(s) 294, 1656
SaqAI TTAA 9 cut(s) 86, 761, 933, 957, 975, 1257, 1464, 1743, 1935
SatI GCNGC 3 cut(s) 39, 755, 1050
Sau3AI GATC 6 cut(s) 423, 1072, 1529, 1917, 1948, 2026
Sau96I GGNCC 3 cut(s) 587, 612, 746
SchI GAGTC 4 cut(s) 64, 800, 931, 1932
ScrFI CCNGG 2 cut(s) 1002, 1520
SduI GDGCHC 1 cut(s) 64
SfaNI GCATC 8 cut(s) 66, 228, 307, 737, 789, 861, 972, 1396
SfcI CTRYAG 1 cut(s) 1248
SfoI GGCGCC 1 cut(s) 178
SfuI TTCGAA 1 cut(s) 982
SinI GGWCC 1 cut(s) 746
SmiMI CAYNNNNRTG 2 cut(s) 294, 1656
SmlI CTYRAG 1 cut(s) 2072
SmoI CTYRAG 1 cut(s) 2072
Sse9I AATT 6 cut(s) 675, 695, 817, 848, 1146, 1412
SsiI CCGC 6 cut(s) 159, 754, 1047, 1484, 1579, 1602
SspDI GGCGCC 1 cut(s) 176
SspMI CTAG 8 cut(s) 305, 323, 600, 666, 705, 858, 1022, 1767
StyD4I CCNGG 2 cut(s) 1000, 1518
StyI CCWWGG 3 cut(s) 289, 514, 1533
TasI AATT 6 cut(s) 675, 695, 817, 848, 1146, 1412
TatI WGTACW 3 cut(s) 792, 1875, 2017
TauI GCSGC 1 cut(s) 757
TfiI GAWTC 5 cut(s) 443, 534, 864, 880, 979
Tru1I TTAA 9 cut(s) 86, 761, 933, 957, 975, 1257, 1464, 1743, 1935
Tru9I TTAA 9 cut(s) 86, 761, 933, 957, 975, 1257, 1464, 1743, 1935
TscAI CASTG 1 cut(s) 1658
TseFI GTSAC 2 cut(s) 707, 1906
TseI GCWGC 2 cut(s) 38, 1049
Tsp45I GTSAC 2 cut(s) 707, 1906
TspDTI ATGAA 5 cut(s) 1124, 1469, 1764, 1949, 2012
TspGWI ACGGA 1 cut(s) 467
TspRI CASTG 1 cut(s) 1658
Van91I CCANNNNNTGG 1 cut(s) 1805
VpaK11BI GGWCC 1 cut(s) 746
VspI ATTAAT 1 cut(s) 1743
XapI RAATTY 2 cut(s) 848, 1412
XbaI TCTAGA 2 cut(s) 665, 1766
XcmI CCANNNNNNNNNTGG 2 cut(s) 1789, 2053
XmnI GAANNNNTTC 2 cut(s) 151, 1392
XspI CTAG 8 cut(s) 305, 323, 600, 666, 705, 858, 1022, 1767
Zsp2I ATGCAT 1 cut(s) 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.