Rroxscaffold_7G00160020

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000166
Physical Location & Seq
Reverse (-)
3051152 .. 3053748
2597 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00160020.1

Sequence Viewer

Length: 2400 bp
ATGGCTTCTCTGTTTCACATTTTTCTTCTTTTTCTTGCAATTTATTCCCAAATATCGTCTTCAACCTCCGATACTCTGAATAAAGGCTCATCCCTATCTGTAGAGAAACCAGACGATGTTTTAACTTCACCGGATGGAGTTTTCACCGCCGGGTTTCACCAAGTCGGCAACAATTCATTTTGCTTTGCTATTTGGTTCAGTGAGCCATTTGACCACTACAAATACAGAACCATAGTCTGGATGGCCAACCGTGACCAACCAGTCAATGGCAAACACTCAAAGCTCTCCCTCCTCAAAACTGGTGATCTCATCTTAACCGACGCTGGTCAATCCAATGTTTGGTCCACAGCCACCACTTCAGTCTCTCCAGCGAACTTAAGCCTCCACAATTCCGGCAATCTTGTTTTGCTCAACTCGGAGCATGTCATTCTATGGCAGAGCTTTGGTTACCCTACTGATACTCTTCTTTCGAGCCAACCACTCACCAGAAGCACAATCCTTGTCTCCATGAGAAGCCCGAGCAACTACTCCTCAGGCTTCTACAAGCTCTTCTTTGACAATGACAACCTTCTCCACCTACTCTTCGACGGTCTTGAGGTTTCAAGTGTGTATTGGTTTGAGCCGTGGCTCACAGGCCGAAACGCCGGAAGGTCCACAGATAACAGCAGTAGAGTTGCCGTGATGGATTCCCTAGGCAAGTTTACTTCATCGGACACCTATACTTTGATCGCTTCCGATTATGGTGCAGCTTCGCAGAGAAGACTGACGGTCGATTGTGATGGAAATGTTCGGTTGCACAGCCGGGCCAAACCCGGAGACAGATGGATTGTGACAGGGCAGATCATTCAAGATCCTTGTAAGATTCATGGGGTTTGTGGTCCTAATAGTGTGTGCAGCTATGAGCCTAGCACCGGAAGAAAATGTTCTTGCATTCCTGGTTACAAAATTTCAAATCTTACTGATTGGTATTATGGTTGTGAACCTGAGTTCAATTACACTTGCGGTAGAGGTGAGTCTAGTTTCTTCAAGCTCTCGAAGCTCGAGTTTTTCGGGTACGATTACGGATACTTCACCAACTACACCATTATGGAGTGTCAGGATCTTTGTTTGCAGCTGTGTAACTGCAAAGGGTTCCAATACTCTCGAATCCCAAGCCTTAGCATATATAGCTGTTATCCGAAAACAGTGTTGCTCAATGGTTACAGGTCTCCTAGCTTTTTCGGAGACATATATTTGAGAGTGCCAAAGATCCATCTGTCATCTTATGGATTGCCACAACAAGATTATAGTTTGAGTTGCTTAGATAAGGTGGTTGAGCTAGACAGAACCTATGAGAAGAGCCGTGTAACTGGTCTAGTGAAATTTTTGCTCTGGTTTGCCTGTGGAGTTGGAGGGTTCGAGATCATTTGTATACTTTTGGTTTTGGGTCTAATAACTCGAAACCGGAGAGATTCCAATGAGGATAAGTACGGTTACCATCTTGCTGCAACTGGATTCACGAGGTTTAGCTACGCTGAGCTTAAGAAGGCGACGCGGGGTTTTAGTGAAGAAATTGGAAGAGGAGCAGGAGGTGTTGTTTACAAAGCTGTGTTGGCTGATCATCGAGTTGCAGCGATCAAGAGGCTTAATGAAACCAACCAAGGAGAAGGTGAGTTTTCAGCAGAAGTCAACACTATTGGGAGGCTGAACCATATGCATTTGATTGAGATGTGGGGATATTGCTCGGAGGGAAAGCACAGGCTTCTTGTTTATGAGTACATGGAGCATGGTTCCTTGGCACAAAAGTTAGCTACCAATGTCCTTGATTGGGAAAAGAGGTTTGAGATTGCTCTAGGCACTGCAAAGGGTCTTGCTTATTTGCATGAAGAATGTTTGGAGTGGGTTTTACATTGTGATGTCAAGCCTCAAAACATACTCTTGGACTCCAATTATCAACCAAAGGTTGCAGATTTTGGCCTATCCAAGCTCCTCAACAGAGATGACCGTAAGAACTGGAGCTTTTCGAGGATTCGAGGAACTAGAGGTTACATTGCTCCGGAGTGGGTTTACAATTTGCCCATCACATCCAAAGTGGATGTGTACAGCTATGGGGTTGTGGTGTTGGAGATGGTGACCGGAAAGAACCCAATAAAGCCGGATGTGGATGCCATTGATGGGGAGCAGAGAAGGCTGATCATGTGGGTGAGGGAGAAATTACATAATGGAACTTCTGCTAGTGAAATTGAAGCTCGGATAGGAGACGTCATAGACCCTTCGTTTGAAGGTAAATATGATGTAAAAAAGATGGGGATTCTGTTGGAAGTGGCCTTGCATTGCGTAGAGGAAGACAGAGACGCGAGACCAACTATGAGCCAAGTCGTTGAGATGCTTGTGCTGCTTGACAAAGACCAAGAGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

799

Amino Acids

90.11

Weight (kDa)

6.26

Isoelectric Point (pI)

36.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 77 - 163 7.5e-22 D-mannose binding lectin
S_locus_glycop PF00954 246 - 316 1.4e-07 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 514 - 790 3.9e-39 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 515 - 788 2.2e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 260
AatII GACGTC 1 cut(s) 2244
AccB7I CCANNNNNTGG 3 cut(s) 237, 266, 339
AccI GTMKAC 1 cut(s) 1411
AccII CGCG 2 cut(s) 1534, 2336
AccIII TCCGGA 1 cut(s) 2035
AciI CCGC 3 cut(s) 147, 1002, 1534
AclWI GGATC 3 cut(s) 845, 1107, 1243
AcoI YGGCCR 1 cut(s) 243
AcsI RAATTY 2 cut(s) 945, 1361
AcuI CTGAAG 1 cut(s) 342
AcyI GRCGYC 1 cut(s) 2241
AfaI GTAC 4 cut(s) 1055, 1469, 1757, 2081
AfiI CCNNNNNNNGG 6 cut(s) 237, 266, 339, 911, 1807, 2154
AflII CTTAAG 2 cut(s) 376, 1520
AgsI TTSAA 8 cut(s) 63, 603, 848, 951, 991, 1027, 2225, 2261
AhdI GACNNNNNGTC 1 cut(s) 767
AjnI CCWGG 1 cut(s) 934
Alw26I GTCTC 8 cut(s) 367, 508, 810, 1212, 1218, 2232, 2325, 2332
AlwI GGATC 3 cut(s) 845, 1107, 1243
Ama87I CYCGRG 2 cut(s) 517, 1040
Aor13HI TCCGGA 1 cut(s) 2035
AoxI GGCC 5 cut(s) 243, 634, 804, 1954, 2304
ApeKI GCWGC 6 cut(s) 746, 894, 1111, 1484, 1610, 2374
ApoI RAATTY 2 cut(s) 945, 1361
ArsI GACNNNNNNTTYG 2 cut(s) 2240, 2272
Asp700I GAANNNNTTC 1 cut(s) 922
AspA2I CCTAGG 1 cut(s) 691
AspS9I GGNCC 4 cut(s) 342, 651, 804, 878
AsuC2I CCSGG 3 cut(s) 151, 803, 813
AvaI CYCGRG 2 cut(s) 517, 1040
AvaII GGWCC 3 cut(s) 342, 651, 878
AvrII CCTAGG 1 cut(s) 691
AxyI CCTNAGG 1 cut(s) 532
BalI TGGCCA 1 cut(s) 245
BauI CACGAG 1 cut(s) 1498
BbsI GAAGAC 3 cut(s) 51, 766, 2331
BbvI GCAGC 6 cut(s) 758, 906, 1123, 1471, 1622, 2361
BceAI ACGGC 3 cut(s) 607, 662, 1326
BcgI CGANNNNNNTGC 2 cut(s) 725, 759
BciT130I CCWGG 1 cut(s) 936
BciVI GTATCC 1 cut(s) 1058
BclI TGATCA 2 cut(s) 1597, 2172
BcnI CCSGG 3 cut(s) 151, 803, 813
BcoDI GTCTC 8 cut(s) 367, 508, 810, 1212, 1218, 2232, 2325, 2332
BfaI CTAG 9 cut(s) 692, 906, 1017, 1212, 1319, 1355, 1832, 2019, 2214
BfmI CTRYAG 1 cut(s) 99
BfrI CTTAAG 2 cut(s) 376, 1520
BfuI GTATCC 1 cut(s) 1058
BisI GCNGC 6 cut(s) 747, 895, 1112, 1485, 1611, 2375
BlnI CCTAGG 1 cut(s) 691
BlpI GCTNAGC 1 cut(s) 1515
BlsI GCNGC 6 cut(s) 748, 896, 1113, 1486, 1612, 2376
Bme1390I CCNGG 4 cut(s) 151, 803, 813, 936
Bme18I GGWCC 3 cut(s) 342, 651, 878
BmeRI GACNNNNNGTC 1 cut(s) 767
BmeT110I CYCGRG 2 cut(s) 517, 1040
BmgT120I GGNCC 4 cut(s) 342, 651, 804, 878
BmiI GGNNCC 2 cut(s) 1133, 1771
BmrFI CCNGG 4 cut(s) 151, 803, 813, 936
BmsI GCATC 2 cut(s) 2134, 2355
BoxI GACNNNNGTC 1 cut(s) 324
BpiI GAAGAC 3 cut(s) 51, 766, 2331
BpmI CTGGAG 2 cut(s) 351, 2014
Bpu10I CCTNAGC 1 cut(s) 1157
Bpu1102I GCTNAGC 1 cut(s) 1515
BpuEI CTTGAG 1 cut(s) 614
BpuMI CCSGG 3 cut(s) 151, 803, 813
BsaHI GRCGYC 1 cut(s) 2241
BsaI GGTCTC 2 cut(s) 1212, 2332
BsaJI CCNNGG 4 cut(s) 623, 691, 1639, 1773
BsaWI WCCGGW 5 cut(s) 130, 911, 1443, 2035, 2114
BsaXI ACNNNNNCTCC 2 cut(s) 1560, 1590
Bsc4I CCNNNNNNNGG 6 cut(s) 237, 266, 339, 911, 1807, 2154
Bse1I ACTGG 5 cut(s) 260, 304, 1354, 1495, 1997
Bse21I CCTNAGG 1 cut(s) 532
Bse3DI GCAATG 2 cut(s) 2028, 2311
BseAI TCCGGA 1 cut(s) 2035
BseBI CCWGG 1 cut(s) 936
BseDI CCNNGG 4 cut(s) 623, 691, 1639, 1773
BseGI GGATG 7 cut(s) 89, 139, 246, 2063, 2080, 2143, 2149
BseLI CCNNNNNNNGG 6 cut(s) 237, 266, 339, 911, 1807, 2154
BseMI GCAATG 2 cut(s) 2028, 2311
BseMII CTCAG 3 cut(s) 546, 975, 1506
BseNI ACTGG 5 cut(s) 260, 304, 1354, 1495, 1997
BseRI GAGGAG 4 cut(s) 281, 520, 1575, 1958
BseXI GCAGC 6 cut(s) 758, 906, 1123, 1471, 1622, 2361
BsgI GTGCAG 2 cut(s) 765, 913
Bsh1236I CGCG 2 cut(s) 1534, 2336
Bsh1285I CGRYCG 1 cut(s) 771
BshFI GGCC 5 cut(s) 245, 636, 806, 1956, 2306
BsiEI CGRYCG 1 cut(s) 771
BsiHKCI CYCGRG 2 cut(s) 517, 1040
BslI CCNNNNNNNGG 6 cut(s) 237, 266, 339, 911, 1807, 2154
BsmAI GTCTC 8 cut(s) 367, 508, 810, 1212, 1218, 2232, 2325, 2332
BsmBI CGTCTC 2 cut(s) 2232, 2325
BsmI GAATGC 1 cut(s) 930
BsnI GGCC 5 cut(s) 245, 636, 806, 1956, 2306
Bso31I GGTCTC 2 cut(s) 1212, 2332
BsoBI CYCGRG 2 cut(s) 517, 1040
Bsp13I TCCGGA 1 cut(s) 2035
Bsp1407I TGTACA 1 cut(s) 2079
Bsp1720I GCTNAGC 1 cut(s) 1515
BspACI CCGC 3 cut(s) 147, 1002, 1534
BspANI GGCC 5 cut(s) 245, 636, 806, 1956, 2306
BspCNI CTCAG 3 cut(s) 545, 976, 1507
BspEI TCCGGA 1 cut(s) 2035
BspFNI CGCG 2 cut(s) 1534, 2336
BspLI GGNNCC 2 cut(s) 1133, 1771
BspPI GGATC 3 cut(s) 845, 1107, 1243
BspQI GCTCTTC 2 cut(s) 554, 1331
BspTI CTTAAG 2 cut(s) 376, 1520
BspTNI GGTCTC 2 cut(s) 1212, 2332
BsrDI GCAATG 2 cut(s) 2028, 2311
BsrGI TGTACA 1 cut(s) 2079
BsrI ACTGG 5 cut(s) 260, 304, 1354, 1495, 1997
BssECI CCNNGG 4 cut(s) 623, 691, 1639, 1773
BssNAI GTATAC 1 cut(s) 1412
BssNI GRCGYC 1 cut(s) 2241
BssSI CACGAG 1 cut(s) 1498
BssT1I CCWWGG 3 cut(s) 691, 1639, 1773
Bst1107I GTATAC 1 cut(s) 1412
Bst2BI CACGAG 1 cut(s) 1498
Bst2UI CCWGG 1 cut(s) 936
Bst4CI ACNGT 6 cut(s) 251, 590, 769, 1186, 1472, 1985
Bst6I CTCTTC 5 cut(s) 468, 554, 587, 1331, 1552
BstACI GRCGYC 1 cut(s) 2241
BstAFI CTTAAG 2 cut(s) 376, 1520
BstAUI TGTACA 1 cut(s) 2079
BstDEI CTNAG 5 cut(s) 532, 984, 1157, 1300, 1515
BstDSI CCRYGG 1 cut(s) 623
BstEII GGTNACC 3 cut(s) 446, 1472, 2110
BstF5I GGATG 7 cut(s) 89, 139, 246, 2063, 2080, 2143, 2149
BstFNI CGCG 2 cut(s) 1534, 2336
BstMAI GTCTC 8 cut(s) 367, 508, 810, 1212, 1218, 2232, 2325, 2332
BstMCI CGRYCG 1 cut(s) 771
BstMWI GCNNNNNNNGC 5 cut(s) 1036, 1167, 1592, 2167, 2374
BstNI CCWGG 1 cut(s) 936
BstNSI RCATGY 1 cut(s) 425
BstPAI GACNNNNGTC 1 cut(s) 324
BstPI GGTNACC 3 cut(s) 446, 1472, 2110
BstSCI CCNGG 4 cut(s) 149, 801, 811, 934
BstSFI CTRYAG 1 cut(s) 99
BstUI CGCG 2 cut(s) 1534, 2336
BstV1I GCAGC 6 cut(s) 758, 906, 1123, 1471, 1622, 2361
BstV2I GAAGAC 3 cut(s) 51, 766, 2331
BstX2I RGATCY 3 cut(s) 850, 1099, 1248
BstYI RGATCY 3 cut(s) 850, 1099, 1248
BstZ17I GTATAC 1 cut(s) 1412
Bsu36I CCTNAGG 1 cut(s) 532
BsuI GTATCC 1 cut(s) 1058
BsuRI GGCC 5 cut(s) 245, 636, 806, 1956, 2306
BtgI CCRYGG 1 cut(s) 623
BtsCI GGATG 7 cut(s) 89, 139, 246, 2063, 2080, 2143, 2149
BtsI GCAGTG 1 cut(s) 1836
BtsIMutI CAGTG 3 cut(s) 205, 1191, 1836
Cfr13I GGNCC 4 cut(s) 342, 651, 804, 878
CseI GACGC 3 cut(s) 329, 1540, 2342
Csp6I GTAC 4 cut(s) 1054, 1468, 1756, 2080
CviAII CATG 7 cut(s) 422, 508, 866, 1759, 1766, 1862, 2176
CviQI GTAC 4 cut(s) 1054, 1468, 1756, 2080
DdeI CTNAG 5 cut(s) 532, 984, 1157, 1300, 1515
DrdI GACNNNNNNGTC 1 cut(s) 260
DriI GACNNNNNGTC 1 cut(s) 767
DseDI GACNNNNNNGTC 1 cut(s) 260
EaeI YGGCCR 1 cut(s) 243
Eam1104I CTCTTC 5 cut(s) 468, 554, 587, 1331, 1552
Eam1105I GACNNNNNGTC 1 cut(s) 767
EarI CTCTTC 5 cut(s) 468, 554, 587, 1331, 1552
Eco130I CCWWGG 3 cut(s) 691, 1639, 1773
Eco31I GGTCTC 2 cut(s) 1212, 2332
Eco47I GGWCC 3 cut(s) 342, 651, 878
Eco57I CTGAAG 1 cut(s) 342
Eco81I CCTNAGG 1 cut(s) 532
Eco88I CYCGRG 2 cut(s) 517, 1040
Eco91I GGTNACC 3 cut(s) 446, 1472, 2110
EcoO65I GGTNACC 3 cut(s) 446, 1472, 2110
EcoRII CCWGG 1 cut(s) 934
EcoT14I CCWWGG 3 cut(s) 691, 1639, 1773
EcoT22I ATGCAT 1 cut(s) 1698
ErhI CCWWGG 3 cut(s) 691, 1639, 1773
Esp3I CGTCTC 2 cut(s) 2232, 2325
FaeI CATG 7 cut(s) 425, 511, 869, 1762, 1769, 1865, 2179
FalI AAGNNNNNCTT 2 cut(s) 536, 568
FatI CATG 7 cut(s) 421, 507, 865, 1758, 1765, 1861, 2175
FauI CCCGC 1 cut(s) 1527
FauNDI CATATG 1 cut(s) 1692
FbaI TGATCA 2 cut(s) 1597, 2172
FblI GTMKAC 1 cut(s) 1411
Fnu4HI GCNGC 6 cut(s) 747, 895, 1112, 1485, 1611, 2375
FokI GGATG 7 cut(s) 76, 146, 253, 2050, 2087, 2150, 2156
Fsp4HI GCNGC 6 cut(s) 747, 895, 1112, 1485, 1611, 2375
FspBI CTAG 9 cut(s) 692, 906, 1017, 1212, 1319, 1355, 1832, 2019, 2214
GluI GCNGC 6 cut(s) 747, 895, 1112, 1485, 1611, 2375
GsuI CTGGAG 2 cut(s) 351, 2014
HaeIII GGCC 5 cut(s) 245, 636, 806, 1956, 2306
HgaI GACGC 3 cut(s) 329, 1540, 2342
Hin1I GRCGYC 1 cut(s) 2241
Hin1II CATG 7 cut(s) 425, 511, 869, 1762, 1769, 1865, 2179
HincII GTYRAC 1 cut(s) 1669
HindII GTYRAC 1 cut(s) 1669
HinfI GANTC 9 cut(s) 686, 862, 1013, 1146, 1451, 1494, 1922, 2008, 2290
Hpy166II GTNNAC 9 cut(s) 345, 654, 702, 980, 1412, 1579, 1669, 2047, 2080
Hpy188I TCNGA 9 cut(s) 70, 78, 418, 712, 736, 1179, 1223, 1726, 2232
Hpy8I GTNNAC 9 cut(s) 345, 654, 702, 980, 1412, 1579, 1669, 2047, 2080
Hpy99I CGWCG 3 cut(s) 323, 590, 1534
HpyAV CCTTC 7 cut(s) 578, 642, 1519, 1640, 2160, 2255, 2262
HpyCH4III ACNGT 6 cut(s) 251, 590, 769, 1186, 1472, 1985
HpyCH4IV ACGT 1 cut(s) 2241
HpyF10VI GCNNNNNNNGC 5 cut(s) 1036, 1167, 1592, 2167, 2374
HpyF3I CTNAG 5 cut(s) 532, 984, 1157, 1300, 1515
HpySE526I ACGT 1 cut(s) 2241
Hsp92I GRCGYC 1 cut(s) 2241
Hsp92II CATG 7 cut(s) 425, 511, 869, 1762, 1769, 1865, 2179
Kpn2I TCCGGA 1 cut(s) 2035
Ksp22I TGATCA 2 cut(s) 1597, 2172
LguI GCTCTTC 2 cut(s) 554, 1331
LmnI GCTCC 7 cut(s) 418, 1562, 1762, 1971, 1995, 2038, 2158
Lsp1109I GCAGC 6 cut(s) 758, 906, 1123, 1471, 1622, 2361
LweI GCATC 2 cut(s) 2134, 2355
MaeI CTAG 9 cut(s) 692, 906, 1017, 1212, 1319, 1355, 1832, 2019, 2214
MaeII ACGT 1 cut(s) 2241
MflI RGATCY 3 cut(s) 850, 1099, 1248
MlsI TGGCCA 1 cut(s) 245
MluNI TGGCCA 1 cut(s) 245
MlyI GAGTC 2 cut(s) 1022, 1916
MmeI TCCRAC 3 cut(s) 1369, 2082, 2277
Mox20I TGGCCA 1 cut(s) 245
Mph1103I ATGCAT 1 cut(s) 1698
MroI TCCGGA 1 cut(s) 2035
MroXI GAANNNNTTC 1 cut(s) 922
MscI TGGCCA 1 cut(s) 245
MseI TTAA 5 cut(s) 122, 314, 377, 1521, 1626
MslI CAYNNNNRTG 3 cut(s) 1085, 1893, 2180
Msp20I TGGCCA 1 cut(s) 245
MspA1I CMGCKG 1 cut(s) 1114
MspCI CTTAAG 2 cut(s) 376, 1520
MspR9I CCNGG 4 cut(s) 151, 803, 813, 936
Mva1269I GAATGC 1 cut(s) 930
MvaI CCWGG 1 cut(s) 936
MvnI CGCG 2 cut(s) 1534, 2336
MwoI GCNNNNNNNGC 5 cut(s) 1036, 1167, 1592, 2167, 2374
NciI CCSGG 3 cut(s) 151, 803, 813
NdeI CATATG 1 cut(s) 1692
NlaIII CATG 7 cut(s) 425, 511, 869, 1762, 1769, 1865, 2179
NlaIV GGNNCC 2 cut(s) 1133, 1771
NmuCI GTSAC 3 cut(s) 251, 829, 2110
NsiI ATGCAT 1 cut(s) 1698
NspI RCATGY 1 cut(s) 425
PaeR7I CTCGAG 1 cut(s) 1040
PciSI GCTCTTC 2 cut(s) 554, 1331
PctI GAATGC 1 cut(s) 930
PdmI GAANNNNTTC 1 cut(s) 922
PfeI GAWTC 7 cut(s) 686, 862, 1146, 1451, 1494, 2008, 2290
PflMI CCANNNNNTGG 3 cut(s) 237, 266, 339
PkrI GCNGC 6 cut(s) 748, 896, 1113, 1486, 1612, 2376
PleI GAGTC 2 cut(s) 1021, 1916
PpsI GAGTC 2 cut(s) 1021, 1916
PshAI GACNNNNGTC 1 cut(s) 324
Psp6I CCWGG 1 cut(s) 934
PspEI GGTNACC 3 cut(s) 446, 1472, 2110
PspGI CCWGG 1 cut(s) 934
PspN4I GGNNCC 2 cut(s) 1133, 1771
PspPI GGNCC 4 cut(s) 342, 651, 804, 878
PspXI VCTCGAGB 1 cut(s) 1040
PsuI RGATCY 3 cut(s) 850, 1099, 1248
PvuII CAGCTG 1 cut(s) 1114
RsaI GTAC 4 cut(s) 1055, 1469, 1757, 2081
RsaNI GTAC 4 cut(s) 1054, 1468, 1756, 2080
RseI CAYNNNNRTG 3 cut(s) 1085, 1893, 2180
SapI GCTCTTC 2 cut(s) 554, 1331
SaqAI TTAA 5 cut(s) 122, 314, 377, 1521, 1626
SatI GCNGC 6 cut(s) 747, 895, 1112, 1485, 1611, 2375
Sau96I GGNCC 4 cut(s) 342, 651, 804, 878
SchI GAGTC 2 cut(s) 1022, 1916
ScrFI CCNGG 4 cut(s) 151, 803, 813, 936
SfaNI GCATC 2 cut(s) 2134, 2355
SfcI CTRYAG 1 cut(s) 99
Sfr274I CTCGAG 1 cut(s) 1040
SinI GGWCC 3 cut(s) 342, 651, 878
SlaI CTCGAG 1 cut(s) 1040
SmiMI CAYNNNNRTG 3 cut(s) 1085, 1893, 2180
SmlI CTYRAG 4 cut(s) 376, 593, 1040, 1520
SmoI CTYRAG 4 cut(s) 376, 593, 1040, 1520
SsiI CCGC 3 cut(s) 147, 1002, 1534
SspMI CTAG 9 cut(s) 692, 906, 1017, 1212, 1319, 1355, 1832, 2019, 2214
StyD4I CCNGG 4 cut(s) 149, 801, 811, 934
StyI CCWWGG 3 cut(s) 691, 1639, 1773
TaaI ACNGT 6 cut(s) 251, 590, 769, 1186, 1472, 1985
TaiI ACGT 1 cut(s) 2244
TatI WGTACW 2 cut(s) 1755, 2079
TfiI GAWTC 7 cut(s) 686, 862, 1146, 1451, 1494, 2008, 2290
Tru1I TTAA 5 cut(s) 122, 314, 377, 1521, 1626
Tru9I TTAA 5 cut(s) 122, 314, 377, 1521, 1626
TscAI CASTG 3 cut(s) 205, 1191, 1843
TseFI GTSAC 3 cut(s) 251, 829, 2110
TseI GCWGC 6 cut(s) 746, 894, 1111, 1484, 1610, 2374
Tsp45I GTSAC 3 cut(s) 251, 829, 2110
TspDTI ATGAA 5 cut(s) 165, 696, 854, 1644, 1878
TspGWI ACGGA 1 cut(s) 1077
TspRI CASTG 3 cut(s) 205, 1191, 1843
Van91I CCANNNNNTGG 3 cut(s) 237, 266, 339
Vha464I CTTAAG 2 cut(s) 376, 1520
VpaK11BI GGWCC 3 cut(s) 342, 651, 878
XapI RAATTY 2 cut(s) 945, 1361
XceI RCATGY 1 cut(s) 425
XcmI CCANNNNNNNNNTGG 2 cut(s) 238, 263
XhoI CTCGAG 1 cut(s) 1040
XmaJI CCTAGG 1 cut(s) 691
XmiI GTMKAC 1 cut(s) 1411
XmnI GAANNNNTTC 1 cut(s) 922
XspI CTAG 9 cut(s) 692, 906, 1017, 1212, 1319, 1355, 1832, 2019, 2214
ZraI GACGTC 1 cut(s) 2242
Zsp2I ATGCAT 1 cut(s) 1698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.