pycom04g12520

Receptor protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
15445950 .. 15454435
8486 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g12520.38

Sequence Viewer

Length: 6351 bp
ATGAAGGAAAGCCTAATGATGCCAATTAAAAGGGGACTTGGCCGAAGCCCAACATTGAGCCTAGAGACTAACCTACTACCAGCCAAAGAACACTTTCCAGTGGCATTACAAAGCAAAGTTACAGCAGTCAGGCCAAAAATGCCTATAAAAGGAAGAAGAGGCCCCAAAGACAAGGACACTCAACTAATCAAACAAACAACATACAAACTCTGCTCTCAATCATTTTTAAGCGATAGTTCTTTAGAAAGCTATCTCTTGTCTAGATTAAAAGCTTTGATATCTCCCTCAATGCATATAACCCTTGTAACTTCAAAGAGAAGTGATTGCAAGAAGTTCAACCTTGCCAAACAAGGTGAAATCTTGCCTGAAGCTCTTTGTTTGTTTTCTAAATTAGTAGATCTATTACTTAATGCATTCTCCAATATGTATTCAAGATATTTCCACTTGTTTTTATATTTTAAGAAGTCCATTTGCATCTGGATTTGGGCTCTGGACTCTTTTCATTTGAACATACAAGACCATGAACTAAAAGTCCTTGTTTACAAGCCTTTGATAACAAGAAGTTTGAGTAACTTGGGGCATAGTAGTGGCACGCCTAGCACTTACTTAGTTTTGATCGTGAGCCTCAAGATCAACAAGCAAGAGCCCGACTACACATCCAAAAGTGCCAATCCCTTAGGGAGCTATGTTGAGGTCCAAGGAGCCTTCTCCAAAGAAATCTTTGCTCGAACAACTCTTTCGAGAAGTTCTTCACTCTCCGCCAAACATGATTCCAACTTCCTAACTTCCCCAGCTAAATCCTTCACTTGTGGTTTCTATGGTGTAGGCACAAATACGACCAACAGAGATAGATCAATCAACCGCCTTGGCTCCAGAATCTACCTCATTCGAGACAACGCCATGGCCTTGACGGGCGTCGATGGAACATCCATTTGGGATACCACTGCGAACTCTAGCAGCTCTAGAGTTGAAACGACCGTGCTTATGAATTCTAGCGACCTTGTCTTGAGAGACAAGCAAGGTAAATTTCAGTGGCAAAGTTTTGATTTTCCAACTCACATTTTTCTTCCAACCCAGCTTTTTACAAAGACTTCTTTTTTTGACAATGACAATGTTTTGAAGCTCATGTTTGACGATCCTGACACACTGAGCTTGTACTGGCCTGATCCTAAGATCGATCACACCGTTTTCGTCATCAGTCAAACAAACTACAACAATAACAGGGTTATTTTGGAGGAATCGGGGAATTTTTTGTCTAGTGATAAATTGCAATTCAGAGCTTTTGACGTGGGTTCCAGTGCTAAAAGGTGGTTGATGATGGACTATGATGGAAACCTCAAGCTTTATATCATGATGGAGCTGTGTAAGGTGCATGGGATTTATAGGAGAAATGGGATTTCTATTAACACGCGGCAGCCAAAATGCTCGTGCCCTATTAGTTACGAAGTAGCTGACATAAAGAAATTCGTGCAGATTGAGCATGTAGATTTCTATGGTTTTGATCTCAATTATATTAGCTATGGAATAGCAGAAGCAAAATGTTGTACAAAAAGTGCTATTTTCAGTGGGTACAGGTCTCTAAATTTTTCAAGGAGTATGTACATAAGACTGCCTTTAAGTGTCGAAACATCGCTGCCTGTCAATCTCAAGGCCTTATATACATGCAAGAAGAATTTGATAAAGGTTGTAGTCGGTTCTCCTTCGATGTATGGAAATATTGCAAAAAGGGTAAGATGGGTGTATTTGTATAGCTTTGCTTCTGCATTACTTTTCCGAAGGCACAGTGCAGTAACTCTGACCGAAGATGGATATCACGTAATTTCAAGTCAATTTAGAAAGTTTCACTATGCTCAGCTCAAGAAAGCAACCAAAAATCTCAATGAAGTTCTTGGAAGAGGGGTCTCCGGTGCTGTGTACAAGGGCGTTCTAGCGGACTTAAAAGTGGTGGCTGTGAAGAAATTGGCGGATTTATATCAAGGGGAAGGTGTGTTTTGGGCAAAAGTTAGCACAATTGGGAGAATTAATCACATGAACCTAGTGAGAATTTGGGGATTCTATTCTGATGATAAGCACAAACTCCTCATCTTTAAGCACATAAAAAATGGCTCATTGCACAAGCACTTGTTCCCCCAAAATTTACTGGGATGGCAAAAAAGGTTTAAAGTTGCAATTGGAATAGTTATCCATTATGATGTGAAGCCCGAGAACATACTTCTAGGTGGAAATTTCGAAGGCAACAAGAGCTTAGTTTTTTCTCAAATTCATGGAACCAAAAGGTATATGGCCCCCAAGTGGGCTTTGAACCTTCTGATCACTGCAAAAGTGGATGTTTATAGTTTTGGAGTGGTAATTCTAGAGTTAGTGAAGGACATTTGCCTTTTAAGTTGGGTAGTTGAGGACACCAATGATCCAGAGTCGGAGTTGACAAGGTTCGTGAAGGTAGCAAAGCAAAAAATTCAATGTGGAAAGATTTGTGGATCGAGGATAAGATGGATCCAGGCTGATGGGATTTCTTGTGTGGAGGAAGAGAAGAGGAAAAGACCAACCATGGATTTAGTAGTTAAAATTTTACTAGAATCAAGCAATTTAAGCTTTGGAGAGATAAATATATATTCATACAATCATATTAGTTTTCACACCTGTATAAGAATTCATGTAAAATTTGAAAACCAATATATGAGAAAGTATGAAACAGTTGGTCCAATTGTTGGGGATTCAGATGCGTGTAAGGGGACATATAAGATAGCTGAAGAGAAGATAGATGTGAGAACCCTAATATATAAACTTAGGGATTTAGGAACGTCAAGATTGTTTCTGAGCAGGAATGATCCCGCCAAGTTGTTACAAGATAAATATGAATTCTCACTGACAAAAGTTAATGGGAGGAGGTTAGGACTAGAAAACAACTGTGTCTCTCGGCCCAAAGCTAGAGATTATTTCTCCCAGAACACTAGATACACACAAAACATTGTACATAGTCTTTCCAAATGTAGGTACATATATCTCAAAGACATCTTCATAGTTCATAAGCAGTATATAATCATCCATCACATATACTACAAAGAACATAAGTTCGATAAAATATGGTATTCCAAAATATTCTCAGTAAGCATGATAACCATAAAGTGTAAATCTAATTTACTCATAAAACTTTTCACAAAACTAAAACATGCATTTCAGAAGAGGTCCACTCACAGATACTTCGCCGCCGAAGAGTCGCACAAACTAGTGAAGATGGAAACATCACAAATAATTGGCCCTAAGCACATAAAGGGTCCAATTAATAAAACTATACTCAAAAGATTGAATTTCGGAAAACGGACAAAAAAAAAAAAAAAAGATTCAGGATGTCGAATTACCCTAAGAAGGGTCTCGGGTAAATTTCAAAAAAGTCAACGGATCCATGACTTAGGCCCGATTCTTGGGTTTAGTTTAAACGGGCCGAAGGCCTTGGTGGGTAAAGGCCCACAGTTTGGGCTTGGCAACTGGGTTGGGCTCGACCCAGTCTCCTTTGTAAGTCGTTGGAGTCCAACGGAAGGGAAAGTTGATTTTTGGTCGGGAAAGCTCCCGACTCTGGCAGAGATCAAATCTCAATTAAAAAATATAATTTTTTCAGGTCCAGTCGTGGTCAAGAAGTGGCCGGAAAATTTCTACAAAACTAGAGTTCCTTGCCGGAAATTGGGGAGCAATTCCCCCAAGTTGAAACTAACAACTAAGAGAAAAAAAAGGAGTGCAAGTCCTTACCTCGTTGGAAAAGTCTACAGATCGCCGGAGTTCATCGAGGGAGAAAAGTATAGTGGCCTTTGCCACTGTCGAAGTTTTGTAAGCTTGTCGGAGGTAACCCCTGGGGTCGAGGTGGCGTGGGGCGCTGCTTGGCTCCACCTTTATCTTATAGAGATTGGGACCAGGAGACAAACCCAAACGCAATGGGCCCCCTTGGCACACAAACTAAGATCAAAAAGTAAACCCCAAAACAAAAACTCCCAATTTTCACGGGTTGTTACACTGTGTGTAAGTCTCGCCATCATATTTTTGTTGACTTTTATGAGTCGTTGTGAGTGGTTAGACTTTCATTGTCGAGGGTGTTACGTTAGGAGAAATTTGTCCTTGGTGGGAAATTTTAATTTATATGTTATTAATTTTTTAATACAAGAATCTCACCACTTTGAAAAATCTCTCCTAGGCAGGGCCAGAGTTAGGTCCCCGTGGAAAATTGAGATGCCCTCTTCGCCGTACTCTTTGGGCAGTAAAAATCAAGGTCAACCCTTTCACACAACAATTATTCTTTCAAATGCTTTCAATATAATAAATAAATCTTCCAATTTCTTTAGGAGGACCAGGACATTGAACTTATATATCGATCTTAGCCACATTAACCTGCTTGTCACAAATTCTGATGTGAATCCAAGACTGAAAGTAACTAAGTTGGACTCAGACTATGACTTATGTATATTGAATGGAATGGATGCTTCTTATTCACCAAACTTGAGAAAAATGAAGCAACAATTTGTTCCATCTCCAAACTCTCTCTCTTTTCTTACCTTTGCATTCATCACTCTATTCTCCCACTCTTCTTCTGCAACTCCGAAGACCCAAAACAGTCTTTTGAGAGACTCTTCGCTCTCTACCAAACACGATTTTGACTTCCTAACTTCCCCATATGAATCTTTCACTTGTGGTTTCTATGGTGTAGGGACAAATGCTTACTGGTTTTCGATATGGCTTACGAAATCCAGGGACAGAACTCTCGTTTGGACGGCCAACAGACAGACCAGTCAACAACTTCGGCTCCAGAATCTCCCTCAACCGAGACGGCGCCATGGTCTTGACAGACGTCGATGGAACAGCCGTCTGGGGGACCACCACGAACTCCAACAGCTCCGGCAGACAAGCAAGGTAAAGTTTTGTGGCAGAGTTTTGATTTTCCAACTCACTCTTCTCCCAAACCAACGATTTACAAAGAGCAAGAAGCTGACATCTACTTTGGGAAGAAGGCACTTTTGGGACCGCCGGACCGGCTATTTCAACTTCTCTTTCGACAATGACAATGTGTTGAAGCTCATGTTCGACGGCCCTAACACTTCGAGCTTATACTGGCCTGATCCTGATTACTCCGTTTTCTGCAACGATCTACCAAACTACAACAGCAGTAGGGTTGCTGTTTTGGATGAGTTGGGGAATCTTTTCTCCAGTGATAGACTGCAATTCAGAGCTTCCGACGCGGGTTCAAGTGCAGAGAGGCGAAGTGACTGGAAAAAGGGTTGCAAGCCTATGTTTAATTGCTCGAATTTGTGGTCCCAGCAAGTAAAATTCGTGCAGATTGAGCCAGTAGATTTCTACGGTTTTGATCTCAATTATGCCGAACCCATCTCGTCTGAAAATTGCAGGAATCTCTGCGTGGATGATTTTCGGTGCGAAGCATTTAGTTATCGGAAAACAGGAGAAAGGAAATGTTTTACAAAGATTGCTCTTTTTCAATGGACTGCCTCTGAGTGTGGAAACATCGTTGCCTGTCAATCTCAAGGCCTCAAATACATGCAGGAGGATGTAATAATGATTGTTGTGGATTCTCCTTCAATGTATAGAAGTACAGCCAAAAGGGTAAGATGGGTGTATTTGTATAGATTTGCTTTTGCAGTTGGTGCACTTGACATTCTTTTCATAGCTTTGGCCTACTGGCTACTTTTCCAAAGGCACAATGCAGCAGCTCCGACAGAAGATGGATATCACGTAATTTCAAGTCATTTTAGAAAGTTTCGCTACACTGAGCTCAAGAAAGCAACCAAAAACTTCAAGGAAGAGCTTGGAAGAGGGAGTGGTGGCCGAGAAAAAACTGGCGGACATATATCAAGGGTAAGGTGTGTTTTGGGCAGAAAATTTGAAGATTATGTTCTGAAGATAAGCACAAACTCCTGGTCTTTGAGCACGTCGAAAATGGCTCATTGGACAAGCACCTGTTACCCCCAAATTTCCTTGGATGGCAAGATGTTGAATAGTGGCCAAATTAATGGCCAACTTGGCATCCACTCTCGGTTGGTAAACAAAGGAAAAGAAAAATGGTGGACATCATTCCTTGTTTTGGGGAAGAAAATATGGGTTGTTTTTTCTTTTGTCTACCACCCAAAGGGAGCTCATTATTCGGTTTTGAAAGAGAAGAAAGAGAGCCTTTTCTTTTTGGTATATAGGGAGAAAAGCTCATTGTTTTCGGATGTGGGGGGAGCGGCAGATGAGAGAAACAAGGGAGAGCATTCGGTTCTCCCATTTGAATATGAGCTGCTCCTTCCCACCATTTGTAATAATCCCATTTTGTTAGTAATCACTCAATCAAAGATGTTGGTGCTACTTGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

2117

Amino Acids

242.9

Weight (kDa)

9.77

Isoelectric Point (pI)

42.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 4773
AatII GACGTC 1 cut(s) 4837
Acc36I ACCTGC 1 cut(s) 4386
AccB1I GGYRCC 1 cut(s) 4815
AccB7I CCANNNNNTGG 2 cut(s) 2708, 3473
AccBSI CCGCTC 1 cut(s) 6221
AccI GTMKAC 2 cut(s) 3759, 6114
AccII CGCG 2 cut(s) 1411, 5222
AcoI YGGCCR 6 cut(s) 40, 3638, 4758, 5821, 5998, 6010
AcuI CTGAAG 3 cut(s) 387, 2769, 5915
AcyI GRCGYC 3 cut(s) 915, 4816, 4834
AdeI CACNNNGTG 1 cut(s) 4010
AfaI GTAC 9 cut(s) 1157, 1546, 1571, 1601, 1916, 2973, 2996, 4235, 5590
AhlI ACTAGT 1 cut(s) 3226
AjiI CACGTC 2 cut(s) 1288, 5928
AjnI CCWGG 6 cut(s) 2496, 3844, 3905, 4337, 4733, 5912
AjuI GAANNNNNNNTTGG 8 cut(s) 916, 948, 4735, 4767, 4920, 4952, 4984, 5016
AloI GAACNNNNNNTCC 2 cut(s) 516, 548
Alw21I GWGCWC 4 cut(s) 5647, 5772, 5927, 6133
Alw44I GTGCAC 1 cut(s) 5643
Ama87I CYCGRG 2 cut(s) 2201, 3373
ApaI GGGCCC 1 cut(s) 3934
ApaLI GTGCAC 1 cut(s) 5643
ApeKI GCWGC 7 cut(s) 957, 1414, 1633, 3869, 5702, 5705, 6274
ArsI GACNNNNNNTTYG 6 cut(s) 4966, 4998, 5279, 5311, 5900, 5932
AseI ATTAAT 4 cut(s) 2022, 3282, 4137, 6006
Asp700I GAANNNNTTC 3 cut(s) 93, 748, 5183
AspA2I CCTAGG 1 cut(s) 4180
AspLEI GCGC 2 cut(s) 3869, 4818
AsuHPI GGTGA 3 cut(s) 365, 4151, 4470
AsuII TTCGAA 1 cut(s) 2229
AvaI CYCGRG 2 cut(s) 2201, 3373
AvrII CCTAGG 1 cut(s) 4180
AxyI CCTNAGG 1 cut(s) 676
BaeGI GKGCMC 3 cut(s) 1433, 3934, 5647
BalI TGGCCA 2 cut(s) 6000, 6012
BamHI GGATCC 2 cut(s) 2493, 3399
BanI GGYRCC 1 cut(s) 4815
BanII GRGCYC 6 cut(s) 490, 648, 3498, 3934, 5772, 6133
BauI CACGAG 1 cut(s) 1426
BbsI GAAGAC 1 cut(s) 4595
Bbv12I GWGCWC 4 cut(s) 5647, 5772, 5927, 6133
BbvI GCAGC 7 cut(s) 969, 1426, 1620, 3856, 5714, 5717, 6261
BceAI ACGGC 5 cut(s) 4216, 4773, 4829, 4833, 5086
BciT130I CCWGG 6 cut(s) 2498, 3846, 3907, 4339, 4735, 5914
BciVI GTATCC 1 cut(s) 931
BclI TGATCA 1 cut(s) 2310
BcuI ACTAGT 1 cut(s) 3226
BfmI CTRYAG 1 cut(s) 3760
BfoI RGCGCY 2 cut(s) 3870, 4819
BfuAI ACCTGC 1 cut(s) 4386
BfuI GTATCC 1 cut(s) 931
BglI GCCNNNNNGGC 3 cut(s) 3938, 5016, 6018
BglII AGATCT 1 cut(s) 397
BlnI CCTAGG 1 cut(s) 4180
BlpI GCTNAGC 1 cut(s) 1851
Bme1390I CCNGG 6 cut(s) 2498, 3846, 3907, 4339, 4735, 5914
BmeT110I CYCGRG 2 cut(s) 2201, 3373
BmgBI CACGTC 2 cut(s) 1288, 5928
BmrFI CCNGG 6 cut(s) 2498, 3846, 3907, 4339, 4735, 5914
BmrI ACTGGG 3 cut(s) 2150, 3496, 3497
BmsI GCATC 6 cut(s) 9, 483, 2710, 4209, 4456, 6030
BmuI ACTGGG 3 cut(s) 2150, 3496, 3497
BoxI GACNNNNGTC 2 cut(s) 914, 4833
BpiI GAAGAC 1 cut(s) 4595
BplI GAGNNNNNCTC 6 cut(s) 3175, 3207, 4208, 4240, 6179, 6211
BpmI CTGGAG 3 cut(s) 856, 4775, 5173
Bpu10I CCTNAGC 1 cut(s) 3261
Bpu1102I GCTNAGC 1 cut(s) 1851
Bpu14I TTCGAA 1 cut(s) 2229
BpuEI CTTGAG 8 cut(s) 611, 1027, 1322, 1631, 1841, 4507, 5505, 5756
Bsa29I ATCGAT 2 cut(s) 1176, 4359
BsaAI YACGTR 2 cut(s) 1816, 5731
BsaBI GATNNNNATC 4 cut(s) 1809, 1971, 4401, 5724
BsaHI GRCGYC 3 cut(s) 915, 4816, 4834
BsaI GGTCTC 3 cut(s) 1581, 1906, 3376
BsaWI WCCGGW 1 cut(s) 1904
BsaXI ACNNNNNCTCC 8 cut(s) 3491, 3521, 3721, 3751, 3965, 3995, 4773, 4803
Bse118I RCCGGY 1 cut(s) 5015
Bse21I CCTNAGG 1 cut(s) 676
Bse3DI GCAATG 2 cut(s) 2108, 3932
Bse8I GATNNNNATC 4 cut(s) 1809, 1971, 4401, 5724
BseBI CCWGG 6 cut(s) 2498, 3846, 3907, 4339, 4735, 5914
BseCI ATCGAT 2 cut(s) 1176, 4359
BseJI GATNNNNATC 4 cut(s) 1809, 1971, 4401, 5724
BseMI GCAATG 2 cut(s) 2108, 3932
BseMII CTCAG 7 cut(s) 1139, 1865, 2807, 3117, 4446, 5481, 5757
BseRI GAGGAG 2 cut(s) 2069, 2899
BseSI GKGCMC 3 cut(s) 1433, 3934, 5647
BseXI GCAGC 7 cut(s) 969, 1426, 1620, 3856, 5714, 5717, 6261
BseYI CCCAGC 3 cut(s) 790, 1074, 5298
BsgI GTGCAG 4 cut(s) 1490, 1806, 5253, 5336
Bsh1236I CGCG 2 cut(s) 1411, 5222
Bsh1285I CGRYCG 1 cut(s) 978
BshNI GGYRCC 1 cut(s) 4815
BshVI ATCGAT 2 cut(s) 1176, 4359
BsiEI CGRYCG 1 cut(s) 978
BsiHKAI GWGCWC 4 cut(s) 5647, 5772, 5927, 6133
BsiHKCI CYCGRG 2 cut(s) 2201, 3373
BsiSI CCGG 7 cut(s) 1905, 3641, 3673, 3770, 4882, 5011, 5016
BslFI GGGAC 9 cut(s) 48, 2746, 3916, 4186, 4708, 4751, 4871, 5018, 5281
BsmBI CGTCTC 1 cut(s) 4804
BsmFI GGGAC 9 cut(s) 48, 2746, 3916, 4186, 4708, 4751, 4871, 5018, 5281
BsmI GAATGC 3 cut(s) 413, 4547, 6247
Bso31I GGTCTC 3 cut(s) 1581, 1906, 3376
BsoBI CYCGRG 2 cut(s) 2201, 3373
Bsp119I TTCGAA 1 cut(s) 2229
Bsp120I GGGCCC 1 cut(s) 3930
Bsp1286I GDGCHC 9 cut(s) 490, 648, 1433, 3498, 3934, 5647, 5772, 5927, 6133
Bsp1407I TGTACA 4 cut(s) 1544, 1599, 1914, 2971
Bsp1720I GCTNAGC 1 cut(s) 1851
Bsp19I CCATGG 3 cut(s) 900, 2547, 4819
BspCNI CTCAG 7 cut(s) 1140, 1864, 2808, 3116, 4445, 5482, 5758
BspDI ATCGAT 2 cut(s) 1176, 4359
BspFNI CGCG 2 cut(s) 1411, 5222
BspHI TCATGA 1 cut(s) 1350
BspMI ACCTGC 1 cut(s) 4386
BspQI GCTCTTC 1 cut(s) 5793
BspT104I TTCGAA 1 cut(s) 2229
BspT107I GGYRCC 1 cut(s) 4815
BspTNI GGTCTC 3 cut(s) 1581, 1906, 3376
BsrBI CCGCTC 1 cut(s) 6221
BsrDI GCAATG 2 cut(s) 2108, 3932
BsrFI RCCGGY 1 cut(s) 5015
BsrGI TGTACA 4 cut(s) 1544, 1599, 1914, 2971
BssAI RCCGGY 1 cut(s) 5015
BssNI GRCGYC 3 cut(s) 915, 4816, 4834
BssSI CACGAG 1 cut(s) 1426
Bst2BI CACGAG 1 cut(s) 1426
Bst2UI CCWGG 6 cut(s) 2498, 3846, 3907, 4339, 4735, 5914
BstACI GRCGYC 3 cut(s) 915, 4816, 4834
BstAPI GCANNNNNTGC 1 cut(s) 5642
BstAUI TGTACA 4 cut(s) 1544, 1599, 1914, 2971
BstBAI YACGTR 2 cut(s) 1816, 5731
BstBI TTCGAA 1 cut(s) 2229
BstC8I GCNNGC 2 cut(s) 593, 5267
BstDSI CCRYGG 4 cut(s) 900, 2547, 4205, 4819
BstEII GGTNACC 1 cut(s) 3838
BstENI CCTNNNNNAGG 1 cut(s) 147
BstFNI CGCG 2 cut(s) 1411, 5222
BstH2I RGCGCY 2 cut(s) 3870, 4819
BstHHI GCGC 2 cut(s) 3869, 4818
BstMCI CGRYCG 1 cut(s) 978
BstNI CCWGG 6 cut(s) 2498, 3846, 3907, 4339, 4735, 5914
BstNSI RCATGY 4 cut(s) 1484, 1665, 3173, 5539
BstPAI GACNNNNGTC 2 cut(s) 914, 4833
BstPI GGTNACC 1 cut(s) 3838
BstSCI CCNGG 6 cut(s) 2496, 3844, 3905, 4337, 4733, 5912
BstSFI CTRYAG 1 cut(s) 3760
BstSLI GKGCMC 3 cut(s) 1433, 3934, 5647
BstUI CGCG 2 cut(s) 1411, 5222
BstV1I GCAGC 7 cut(s) 969, 1426, 1620, 3856, 5714, 5717, 6261
BstV2I GAAGAC 1 cut(s) 4595
BstX2I RGATCY 3 cut(s) 397, 2493, 3399
BstXI CCANNNNNNTGG 2 cut(s) 2504, 6008
BstYI RGATCY 3 cut(s) 397, 2493, 3399
Bsu15I ATCGAT 2 cut(s) 1176, 4359
Bsu36I CCTNAGG 1 cut(s) 676
BsuI GTATCC 1 cut(s) 931
BsuTUI ATCGAT 2 cut(s) 1176, 4359
BtgI CCRYGG 4 cut(s) 900, 2547, 4205, 4819
BtgZI GCGATG 1 cut(s) 1614
BtrI CACGTC 2 cut(s) 1288, 5928
BtsI GCAGTG 2 cut(s) 942, 2313
BveI ACCTGC 1 cut(s) 4386
Cac8I GCNNGC 2 cut(s) 593, 5267
CciI TCATGA 1 cut(s) 1350
CfoI GCGC 2 cut(s) 3869, 4818
Cfr10I RCCGGY 1 cut(s) 5015
ClaI ATCGAT 2 cut(s) 1176, 4359
CpoI CGGWCCG 1 cut(s) 5013
CseI GACGC 2 cut(s) 904, 5228
Csp6I GTAC 9 cut(s) 1156, 1545, 1570, 1600, 1915, 2972, 2995, 4234, 5589
CspI CGGWCCG 1 cut(s) 5013
CviQI GTAC 9 cut(s) 1156, 1545, 1570, 1600, 1915, 2972, 2995, 4234, 5589
DinI GGCGCC 1 cut(s) 4817
DraI TTTAAA 2 cut(s) 2161, 3435
DraIII CACNNNGTG 1 cut(s) 4010
DrdI GACNNNNNNGTC 1 cut(s) 4773
DseDI GACNNNNNNGTC 1 cut(s) 4773
EaeI YGGCCR 6 cut(s) 40, 3638, 4758, 5821, 5998, 6010
EciI GGCGGA 3 cut(s) 748, 1979, 5853
Ecl136II GAGCTC 2 cut(s) 5770, 6131
Eco147I AGGCCT 3 cut(s) 1652, 3449, 5526
Eco24I GRGCYC 6 cut(s) 490, 648, 3498, 3934, 5772, 6133
Eco31I GGTCTC 3 cut(s) 1581, 1906, 3376
Eco32I GATATC 3 cut(s) 279, 1811, 5726
Eco53kI GAGCTC 2 cut(s) 5770, 6131
Eco57I CTGAAG 3 cut(s) 387, 2769, 5915
Eco81I CCTNAGG 1 cut(s) 676
Eco88I CYCGRG 2 cut(s) 2201, 3373
Eco91I GGTNACC 1 cut(s) 3838
EcoICRI GAGCTC 2 cut(s) 5770, 6131
EcoNI CCTNNNNNAGG 1 cut(s) 147
EcoO109I RGGNCCY 3 cut(s) 161, 3931, 4200
EcoO65I GGTNACC 1 cut(s) 3838
EcoRI GAATTC 3 cut(s) 988, 2649, 2858
EcoRII CCWGG 6 cut(s) 2496, 3844, 3905, 4337, 4733, 5912
EcoRV GATATC 3 cut(s) 279, 1811, 5726
EcoT22I ATGCAT 3 cut(s) 294, 415, 3175
EcoT38I GRGCYC 6 cut(s) 490, 648, 3498, 3934, 5772, 6133
EgeI GGCGCC 1 cut(s) 4817
EheI GGCGCC 1 cut(s) 4817
Esp3I CGTCTC 1 cut(s) 4804
FalI AAGNNNNNCTT 4 cut(s) 1597, 1629, 6150, 6182
FaqI GGGAC 9 cut(s) 48, 2746, 3916, 4186, 4708, 4751, 4871, 5018, 5281
FauI CCCGC 2 cut(s) 2839, 5215
FauNDI CATATG 1 cut(s) 4660
FbaI TGATCA 1 cut(s) 2310
FblI GTMKAC 2 cut(s) 3759, 6114
FriOI GRGCYC 6 cut(s) 490, 648, 3498, 3934, 5772, 6133
GlaI GCGC 2 cut(s) 3868, 4817
GsaI CCCAGC 3 cut(s) 794, 1078, 5302
GsuI CTGGAG 3 cut(s) 856, 4775, 5173
HaeII RGCGCY 2 cut(s) 3870, 4819
HapII CCGG 7 cut(s) 1905, 3641, 3673, 3770, 4882, 5011, 5016
HgaI GACGC 2 cut(s) 904, 5228
HhaI GCGC 2 cut(s) 3869, 4818
Hin1I GRCGYC 3 cut(s) 915, 4816, 4834
Hin6I GCGC 2 cut(s) 3867, 4816
HinP1I GCGC 2 cut(s) 3867, 4816
HincII GTYRAC 5 cut(s) 2424, 3395, 4038, 4262, 4778
HindII GTYRAC 5 cut(s) 2424, 3395, 4038, 4262, 4778
HindIII AAGCTT 4 cut(s) 270, 1340, 2590, 3826
HpaII CCGG 7 cut(s) 1905, 3641, 3673, 3770, 4882, 5011, 5016
HphI GGTGA 3 cut(s) 365, 4151, 4470
Hpy99I CGWCG 5 cut(s) 920, 4839, 5072, 5222, 5932
HpyCH4IV ACGT 7 cut(s) 1287, 1815, 2801, 4089, 4834, 5730, 5927
HpySE526I ACGT 7 cut(s) 1287, 1815, 2801, 4089, 4834, 5730, 5927
Hsp92I GRCGYC 3 cut(s) 915, 4816, 4834
HspAI GCGC 2 cut(s) 3867, 4816
KasI GGCGCC 1 cut(s) 4815
Ksp22I TGATCA 1 cut(s) 2310
LguI GCTCTTC 1 cut(s) 5793
Lsp1109I GCAGC 7 cut(s) 969, 1426, 1620, 3856, 5714, 5717, 6261
LweI GCATC 6 cut(s) 9, 483, 2710, 4209, 4456, 6030
MaeII ACGT 7 cut(s) 1287, 1815, 2801, 4089, 4834, 5730, 5927
MbiI CCGCTC 1 cut(s) 6221
MfeI CAATTG 3 cut(s) 2010, 2169, 2703
MflI RGATCY 3 cut(s) 397, 2493, 3399
MhlI GDGCHC 9 cut(s) 490, 648, 1433, 3498, 3934, 5647, 5772, 5927, 6133
MlsI TGGCCA 2 cut(s) 6000, 6012
MluNI TGGCCA 2 cut(s) 6000, 6012
Mly113I GGCGCC 1 cut(s) 4816
MlyI GAGTC 8 cut(s) 488, 2423, 3224, 3535, 3565, 4057, 4424, 4607
Mox20I TGGCCA 2 cut(s) 6000, 6012
Mph1103I ATGCAT 3 cut(s) 294, 415, 3175
MroXI GAANNNNTTC 3 cut(s) 93, 748, 5183
MscI TGGCCA 2 cut(s) 6000, 6012
MslI CAYNNNNRTG 2 cut(s) 585, 2190
Msp20I TGGCCA 2 cut(s) 6000, 6012
MspI CCGG 7 cut(s) 1905, 3641, 3673, 3770, 4882, 5011, 5016
MspR9I CCNGG 6 cut(s) 2498, 3846, 3907, 4339, 4735, 5914
MssI GTTTAAAC 1 cut(s) 3435
MunI CAATTG 3 cut(s) 2010, 2169, 2703
Mva1269I GAATGC 3 cut(s) 413, 4547, 6247
MvaI CCWGG 6 cut(s) 2498, 3846, 3907, 4339, 4735, 5914
MvnI CGCG 2 cut(s) 1411, 5222
NarI GGCGCC 1 cut(s) 4816
NcoI CCATGG 3 cut(s) 900, 2547, 4819
NdeI CATATG 1 cut(s) 4660
NmeAIII GCCGAG 2 cut(s) 2896, 5849
NmuCI GTSAC 2 cut(s) 4384, 5246
NsiI ATGCAT 3 cut(s) 294, 415, 3175
NspI RCATGY 4 cut(s) 1484, 1665, 3173, 5539
NspV TTCGAA 1 cut(s) 2229
PagI TCATGA 1 cut(s) 1350
PasI CCCWGGG 1 cut(s) 3845
PceI AGGCCT 3 cut(s) 1652, 3449, 5526
PciSI GCTCTTC 1 cut(s) 5793
PcsI WCGNNNNNNNCGW 1 cut(s) 1182
PctI GAATGC 3 cut(s) 413, 4547, 6247
PdmI GAANNNNTTC 3 cut(s) 93, 748, 5183
PflFI GACNNNGTC 2 cut(s) 1001, 3503
PflMI CCANNNNNTGG 2 cut(s) 2708, 3473
PleI GAGTC 8 cut(s) 488, 2422, 3223, 3534, 3565, 4056, 4424, 4607
PluTI GGCGCC 1 cut(s) 4819
PmeI GTTTAAAC 1 cut(s) 3435
PpsI GAGTC 8 cut(s) 488, 2422, 3223, 3534, 3565, 4056, 4424, 4607
Ppu21I YACGTR 2 cut(s) 1816, 5731
PpuMI RGGWCCY 1 cut(s) 4200
PshAI GACNNNNGTC 2 cut(s) 914, 4833
PshBI ATTAAT 4 cut(s) 2022, 3282, 4137, 6006
Psp124BI GAGCTC 2 cut(s) 5772, 6133
Psp5II RGGWCCY 1 cut(s) 4200
Psp6I CCWGG 6 cut(s) 2496, 3844, 3905, 4337, 4733, 5912
PspEI GGTNACC 1 cut(s) 3838
PspFI CCCAGC 3 cut(s) 790, 1074, 5298
PspGI CCWGG 6 cut(s) 2496, 3844, 3905, 4337, 4733, 5912
PspOMI GGGCCC 1 cut(s) 3930
PspPPI RGGWCCY 1 cut(s) 4200
PsrI GAACNNNNNNTAC 2 cut(s) 2939, 2971
PsuI RGATCY 3 cut(s) 397, 2493, 3399
PsyI GACNNNGTC 2 cut(s) 1001, 3503
RsaI GTAC 9 cut(s) 1157, 1546, 1571, 1601, 1916, 2973, 2996, 4235, 5590
RsaNI GTAC 9 cut(s) 1156, 1545, 1570, 1600, 1915, 2972, 2995, 4234, 5589
RseI CAYNNNNRTG 2 cut(s) 585, 2190
Rsr2I CGGWCCG 1 cut(s) 5013
RsrII CGGWCCG 1 cut(s) 5013
SacI GAGCTC 2 cut(s) 5772, 6133
SapI GCTCTTC 1 cut(s) 5793
SchI GAGTC 8 cut(s) 488, 2423, 3224, 3535, 3565, 4057, 4424, 4607
ScrFI CCNGG 6 cut(s) 2498, 3846, 3907, 4339, 4735, 5914
SduI GDGCHC 9 cut(s) 490, 648, 1433, 3498, 3934, 5647, 5772, 5927, 6133
SfaNI GCATC 6 cut(s) 9, 483, 2710, 4209, 4456, 6030
SfcI CTRYAG 1 cut(s) 3760
SfoI GGCGCC 1 cut(s) 4817
SfuI TTCGAA 1 cut(s) 2229
SmiMI CAYNNNNRTG 2 cut(s) 585, 2190
SmlI CTYRAG 8 cut(s) 626, 1006, 1337, 1646, 1856, 4486, 5520, 5771
SmoI CTYRAG 8 cut(s) 626, 1006, 1337, 1646, 1856, 4486, 5520, 5771
SpeI ACTAGT 1 cut(s) 3226
SseBI AGGCCT 3 cut(s) 1652, 3449, 5526
SspDI GGCGCC 1 cut(s) 4815
SspI AATATT 2 cut(s) 1717, 3099
SstI GAGCTC 2 cut(s) 5772, 6133
StuI AGGCCT 3 cut(s) 1652, 3449, 5526
StyD4I CCNGG 6 cut(s) 2496, 3844, 3905, 4337, 4733, 5912
TaiI ACGT 7 cut(s) 1290, 1818, 2804, 4092, 4837, 5733, 5930
TaqII GACCGA 1 cut(s) 1814
TatI WGTACW 6 cut(s) 1155, 1544, 1599, 1914, 2971, 5588
TauI GCSGC 3 cut(s) 1414, 3209, 6224
TseFI GTSAC 2 cut(s) 4384, 5246
TseI GCWGC 7 cut(s) 957, 1414, 1633, 3869, 5702, 5705, 6274
Tsp45I GTSAC 2 cut(s) 4384, 5246
TspGWI ACGGA 4 cut(s) 3334, 3412, 3548, 5104
Tth111I GACNNNGTC 2 cut(s) 1001, 3503
Van91I CCANNNNNTGG 2 cut(s) 2708, 3473
VneI GTGCAC 1 cut(s) 5643
VspI ATTAAT 4 cut(s) 2022, 3282, 4137, 6006
XagI CCTNNNNNAGG 1 cut(s) 147
XbaI TCTAGA 3 cut(s) 260, 962, 2353
XceI RCATGY 4 cut(s) 1484, 1665, 3173, 5539
XcmI CCANNNNNNNNNTGG 1 cut(s) 2278
XmaJI CCTAGG 1 cut(s) 4180
XmiI GTMKAC 2 cut(s) 3759, 6114
XmnI GAANNNNTTC 3 cut(s) 93, 748, 5183
ZraI GACGTC 1 cut(s) 4835
Zsp2I ATGCAT 3 cut(s) 294, 415, 3175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.