Rorug03G0074700

Receptor protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
5868496 .. 5869596
1101 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0074700.1

Sequence Viewer

Length: 582 bp
ATGCCAATTAGCCCTGAACAAGAAGCTCTTGAAGCGCAGAAGGATGCGCAGGAAGTGCACAGGTATGCGGTATGGGGCCTCCTACCAGAGAATGCGAACACAAGGATCAAGAAGGTGATGGAGGCGCTCCGGGAAGAATTTGGTGGGCCGGAGATCGAGCCCCACATCACCATAGTCGGATCCTGCCTAATGACGGAAGATGAAGCGATCGGCTCATTTAGAGAAGGTTGTAACTCGGTCAAGCAAATCTATTGCAAAGTCGAAAACTTCGAGACTAGTAAATTCTATTTCCAGTGTCTTTCTCTCGTCATGGAAATAACCGAGGACCTAAAGGCTCAAACTCGTTGGTTTGCCGGATGTATGAATCGCCCTTTCCCTGCTATGCCACATTTGAGCCTCCTATATGGGAATTTGACAGCTGAAGAGAAAAAAAGAGCTAAAGAGAAAGTTCTTGCTATGGATGAGAGCATTGCTGGACTAACATTCCTCTTAAGTAGGATGGCATTGTACAGAGTCAACTTTGCAGATAGAACTCAAAAATCCTGGGAGAGGATTCTTGAGGGCCACCTTCGAGTCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

193

Amino Acids

22.14

Weight (kDa)

5.68

Isoelectric Point (pI)

53.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 48
AciI CCGC 1 cut(s) 68
AclWI GGATC 3 cut(s) 113, 174, 187
AcsI RAATTY 3 cut(s) 137, 281, 409
AcuI CTGAAG 1 cut(s) 441
AfaI GTAC 1 cut(s) 509
AfiI CCNNNNNNNGG 2 cut(s) 193, 549
AflII CTTAAG 1 cut(s) 490
AgsI TTSAA 1 cut(s) 32
AhlI ACTAGT 1 cut(s) 275
AjnI CCWGG 1 cut(s) 542
AluBI AGCT 3 cut(s) 26, 419, 437
AluI AGCT 3 cut(s) 26, 419, 437
Alw21I GWGCWC 1 cut(s) 60
Alw26I GTCTC 1 cut(s) 266
Alw44I GTGCAC 1 cut(s) 56
AlwI GGATC 3 cut(s) 113, 174, 187
AoxI GGCC 3 cut(s) 76, 146, 562
ApaLI GTGCAC 1 cut(s) 56
ApoI RAATTY 3 cut(s) 137, 281, 409
AspLEI GCGC 3 cut(s) 37, 49, 127
AspS9I GGNCC 4 cut(s) 76, 146, 325, 562
AsuC2I CCSGG 1 cut(s) 131
AsuHPI GGTGA 2 cut(s) 127, 160
AvaII GGWCC 1 cut(s) 325
BaeGI GKGCMC 1 cut(s) 60
BamHI GGATCC 1 cut(s) 179
BanII GRGCYC 1 cut(s) 162
Bbv12I GWGCWC 1 cut(s) 60
BccI CCATC 2 cut(s) 112, 493
BciT130I CCWGG 1 cut(s) 544
BcnI CCSGG 1 cut(s) 131
BcoDI GTCTC 1 cut(s) 266
BcuI ACTAGT 1 cut(s) 275
BfaI CTAG 1 cut(s) 276
BfoI RGCGCY 1 cut(s) 128
BfrI CTTAAG 1 cut(s) 490
Bme1390I CCNGG 2 cut(s) 131, 544
Bme18I GGWCC 1 cut(s) 325
BmgT120I GGNCC 4 cut(s) 76, 146, 325, 562
BmiI GGNNCC 2 cut(s) 77, 181
BmrFI CCNGG 2 cut(s) 131, 544
BmsI GCATC 1 cut(s) 34
BpuEI CTTGAG 1 cut(s) 578
BpuMI CCSGG 1 cut(s) 131
BsaJI CCNNGG 2 cut(s) 321, 543
Bsc4I CCNNNNNNNGG 2 cut(s) 193, 549
Bse1I ACTGG 1 cut(s) 292
Bse3DI GCAATG 1 cut(s) 468
BseBI CCWGG 1 cut(s) 544
BseDI CCNNGG 2 cut(s) 321, 543
BseGI GGATG 4 cut(s) 49, 362, 466, 504
BseLI CCNNNNNNNGG 2 cut(s) 193, 549
BseMI GCAATG 1 cut(s) 468
BseNI ACTGG 1 cut(s) 292
BseSI GKGCMC 1 cut(s) 60
Bsh1285I CGRYCG 1 cut(s) 210
BshFI GGCC 3 cut(s) 78, 148, 564
BsiEI CGRYCG 1 cut(s) 210
BsiHKAI GWGCWC 1 cut(s) 60
BsiSI CCGG 3 cut(s) 130, 149, 354
BslI CCNNNNNNNGG 2 cut(s) 193, 549
BsmAI GTCTC 1 cut(s) 266
BsmI GAATGC 1 cut(s) 97
BsnI GGCC 3 cut(s) 78, 148, 564
Bsp1286I GDGCHC 2 cut(s) 60, 162
Bsp1407I TGTACA 1 cut(s) 507
Bsp143I GATC 4 cut(s) 105, 153, 179, 207
BspACI CCGC 1 cut(s) 68
BspANI GGCC 3 cut(s) 78, 148, 564
BspLI GGNNCC 2 cut(s) 77, 181
BspPI GGATC 3 cut(s) 113, 174, 187
BspTI CTTAAG 1 cut(s) 490
BsrDI GCAATG 1 cut(s) 468
BsrGI TGTACA 1 cut(s) 507
BsrI ACTGG 1 cut(s) 292
BssECI CCNNGG 2 cut(s) 321, 543
BssMI GATC 4 cut(s) 105, 153, 179, 207
Bst2UI CCWGG 1 cut(s) 544
Bst6I CTCTTC 1 cut(s) 417
BstAFI CTTAAG 1 cut(s) 490
BstAPI GCANNNNNTGC 1 cut(s) 55
BstAUI TGTACA 1 cut(s) 507
BstENI CCTNNNNNAGG 1 cut(s) 547
BstF5I GGATG 4 cut(s) 49, 362, 466, 504
BstH2I RGCGCY 1 cut(s) 128
BstHHI GCGC 3 cut(s) 37, 49, 127
BstKTI GATC 4 cut(s) 108, 156, 182, 210
BstMAI GTCTC 1 cut(s) 266
BstMBI GATC 4 cut(s) 105, 153, 179, 207
BstMCI CGRYCG 1 cut(s) 210
BstMWI GCNNNNNNNGC 2 cut(s) 32, 55
BstNI CCWGG 1 cut(s) 544
BstSCI CCNGG 2 cut(s) 129, 542
BstSLI GKGCMC 1 cut(s) 60
BstX2I RGATCY 1 cut(s) 179
BstYI RGATCY 1 cut(s) 179
BsuRI GGCC 3 cut(s) 78, 148, 564
BtsCI GGATG 4 cut(s) 49, 362, 466, 504
BtsIMutI CAGTG 1 cut(s) 299
CfoI GCGC 3 cut(s) 37, 49, 127
Cfr13I GGNCC 4 cut(s) 76, 146, 325, 562
Csp6I GTAC 1 cut(s) 508
CviAII CATG 1 cut(s) 310
CviQI GTAC 1 cut(s) 508
DpnI GATC 4 cut(s) 107, 155, 181, 209
DpnII GATC 4 cut(s) 105, 153, 179, 207
Eam1104I CTCTTC 1 cut(s) 417
EarI CTCTTC 1 cut(s) 417
Eco24I GRGCYC 1 cut(s) 162
Eco47I GGWCC 1 cut(s) 325
Eco57I CTGAAG 1 cut(s) 441
EcoNI CCTNNNNNAGG 1 cut(s) 547
EcoO109I RGGNCCY 2 cut(s) 76, 325
EcoRII CCWGG 1 cut(s) 542
EcoT38I GRGCYC 1 cut(s) 162
FaeI CATG 1 cut(s) 313
FaiI YATR 9 cut(s) 66, 73, 173, 311, 362, 383, 403, 405, 458
FalI AAGNNNNNCTT 2 cut(s) 12, 44
FatI CATG 1 cut(s) 309
FokI GGATG 4 cut(s) 56, 369, 473, 511
FriOI GRGCYC 1 cut(s) 162
FspBI CTAG 1 cut(s) 276
FspI TGCGCA 1 cut(s) 48
GlaI GCGC 3 cut(s) 36, 48, 126
HaeII RGCGCY 1 cut(s) 128
HaeIII GGCC 3 cut(s) 78, 148, 564
HapII CCGG 3 cut(s) 130, 149, 354
HhaI GCGC 3 cut(s) 37, 49, 127
Hin1II CATG 1 cut(s) 313
Hin6I GCGC 3 cut(s) 35, 47, 125
HinP1I GCGC 3 cut(s) 35, 47, 125
HincII GTYRAC 2 cut(s) 517, 577
HindII GTYRAC 2 cut(s) 517, 577
HinfI GANTC 4 cut(s) 364, 513, 553, 573
HpaII CCGG 3 cut(s) 130, 149, 354
HphI GGTGA 2 cut(s) 127, 160
Hpy166II GTNNAC 3 cut(s) 58, 517, 577
Hpy188I TCNGA 1 cut(s) 179
Hpy188III TCNNGA 4 cut(s) 29, 109, 271, 557
Hpy8I GTNNAC 3 cut(s) 58, 517, 577
HpyAV CCTTC 4 cut(s) 34, 106, 218, 578
HpyCH4V TGCA 3 cut(s) 58, 255, 524
HpyF10VI GCNNNNNNNGC 2 cut(s) 32, 55
Hsp92II CATG 1 cut(s) 313
HspAI GCGC 3 cut(s) 35, 47, 125
Kzo9I GATC 4 cut(s) 105, 153, 179, 207
LmnI GCTCC 1 cut(s) 132
LweI GCATC 1 cut(s) 34
MaeI CTAG 1 cut(s) 276
MaeIII GTNAC 1 cut(s) 230
MalI GATC 4 cut(s) 107, 155, 181, 209
MboI GATC 4 cut(s) 105, 153, 179, 207
MboII GAAGA 3 cut(s) 146, 209, 434
MflI RGATCY 1 cut(s) 179
MhlI GDGCHC 2 cut(s) 60, 162
MluCI AATT 4 cut(s) 6, 137, 281, 409
MlyI GAGTC 2 cut(s) 522, 582
MmeI TCCRAC 1 cut(s) 157
MnlI CCTC 7 cut(s) 89, 115, 316, 407, 497, 543, 553
MseI TTAA 1 cut(s) 491
MslI CAYNNNNRTG 1 cut(s) 63
MspA1I CMGCKG 1 cut(s) 419
MspCI CTTAAG 1 cut(s) 490
MspI CCGG 3 cut(s) 130, 149, 354
MspR9I CCNGG 2 cut(s) 131, 544
Mva1269I GAATGC 1 cut(s) 97
MvaI CCWGG 1 cut(s) 544
MwoI GCNNNNNNNGC 2 cut(s) 32, 55
NciI CCSGG 1 cut(s) 131
NdeII GATC 4 cut(s) 105, 153, 179, 207
NlaIII CATG 1 cut(s) 313
NlaIV GGNNCC 2 cut(s) 77, 181
NsbI TGCGCA 1 cut(s) 48
PcsI WCGNNNNNNNCGW 1 cut(s) 267
PctI GAATGC 1 cut(s) 97
PfeI GAWTC 2 cut(s) 364, 553
PfoI TCCNGGA 1 cut(s) 129
Ple19I CGATCG 1 cut(s) 210
PleI GAGTC 2 cut(s) 521, 581
PpsI GAGTC 2 cut(s) 521, 581
PpuMI RGGWCCY 1 cut(s) 325
Psp5II RGGWCCY 1 cut(s) 325
Psp6I CCWGG 1 cut(s) 542
PspGI CCWGG 1 cut(s) 542
PspN4I GGNNCC 2 cut(s) 77, 181
PspPI GGNCC 4 cut(s) 76, 146, 325, 562
PspPPI RGGWCCY 1 cut(s) 325
PsuI RGATCY 1 cut(s) 179
PvuI CGATCG 1 cut(s) 210
PvuII CAGCTG 1 cut(s) 419
RsaI GTAC 1 cut(s) 509
RsaNI GTAC 1 cut(s) 508
RseI CAYNNNNRTG 1 cut(s) 63
SaqAI TTAA 1 cut(s) 491
Sau3AI GATC 4 cut(s) 105, 153, 179, 207
Sau96I GGNCC 4 cut(s) 76, 146, 325, 562
SchI GAGTC 2 cut(s) 522, 582
ScrFI CCNGG 2 cut(s) 131, 544
SduI GDGCHC 2 cut(s) 60, 162
SetI ASST 8 cut(s) 28, 65, 117, 229, 330, 421, 439, 570
SfaNI GCATC 1 cut(s) 34
SinI GGWCC 1 cut(s) 325
SmiMI CAYNNNNRTG 1 cut(s) 63
SmlI CTYRAG 2 cut(s) 490, 557
SmoI CTYRAG 2 cut(s) 490, 557
SpeI ACTAGT 1 cut(s) 275
Sse9I AATT 4 cut(s) 6, 137, 281, 409
SsiI CCGC 1 cut(s) 68
SspMI CTAG 1 cut(s) 276
StyD4I CCNGG 2 cut(s) 129, 542
TaqI TCGA 4 cut(s) 156, 261, 270, 571
TaqII GACCGA 1 cut(s) 226
TasI AATT 4 cut(s) 6, 137, 281, 409
TatI WGTACW 1 cut(s) 507
TfiI GAWTC 2 cut(s) 364, 553
Tru1I TTAA 1 cut(s) 491
Tru9I TTAA 1 cut(s) 491
TscAI CASTG 1 cut(s) 299
TspDTI ATGAA 2 cut(s) 216, 377
TspGWI ACGGA 1 cut(s) 209
TspRI CASTG 1 cut(s) 299
Vha464I CTTAAG 1 cut(s) 490
VneI GTGCAC 1 cut(s) 56
VpaK11BI GGWCC 1 cut(s) 325
XagI CCTNNNNNAGG 1 cut(s) 547
XapI RAATTY 3 cut(s) 137, 281, 409
XspI CTAG 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.