Prupe.6G263000_v2.0.a1

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000166
Physical Location & Seq
Forward (+)
25282178 .. 25284786
2609 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G263000.1

Sequence Viewer

Length: 2433 bp
ATGAGGTACCAAGTTGTTTCATCCCCAAAAAATGTTGTCCGGTTTCTTACTTTACTAACCATCACTGTGTTTTTCCACTGTTCTGCTACTGCAAAAACGCAGAATAGTCTGAAAAGAGGCTCTTCTCTCTCAGTTGAAGATGACTCGGACTTCCTAACTTCCCCAGACGAGTCTTTCACATGTGGGTTCTATGGGGTGGGCACAAATGCTTACTGGTTCTCAATATGGTTCACAAACTCTAAAAGCAGATCAGTTGTTTGGATGGCTAACAGAGACAAGCCTGTCAATAGCCTTGGCTCCAGAGTTTCGCTTCGAAAAGATGGCTCGTTGGTCTTGACCGATGTGGATGGCGCAACTGTCTGGCAGACCAGCACCAACTCCAGTAGCCTTGATGTTGAGAGAGCAGAGCTTTTGAATTCTGGCAACCTTGTTCTGAAAGATGCTCATGGTAAAATTCTGTGGCAAAGCTTTGATTTTCCCACTGATACCCTTCTCCCAAACCAACCCTTTACAAAGAGCAAGAAGCTGATATCCACTTTAGGAAGAGGGACTTTTGGTACTGGCTATTTCAGTTTCTATTTTGATAATGATAATGTTCTCAAGTTGATGTATGATGGTCCTGACATTTCAAGCTTATATTGGCCTGATCCTGATTATGGTGTATTTTTAAATGGTAGAACAAACTATAACAGTAGCAGGATAGCTGTGTTAGATGACTCTGGCAATTTTTTGTCCAGTGATAAATTGCAATTCAGTGCTTCTGACATGGGTGTAGGCGTAAAAAGGCGGTTGACGATGGATTATGATGGAAACCTAAGACTTTATAGTCTCAACAGTTTGACAGGATTCTGGGTGATCACCTGGGAAGCTATGGCAGAGCTGTGCAAGGTGCATGGCATCTGTGGAAGAAATGGGATTTGTATTTATACACCAAAGCCCAAGTGCTCATGCCCTCCTGGCTATGATGTAGTTGACACAAGTAACTTGAACAAGGGTTGCAAGCCCAAGTTTAATCTTACATGCTCACAGTCCCAGCAAGTGAAATTTGTGCAGATTCAGCAAGTAGATTTCTATGGATTTGATCTCAACTATAGTGAACCCATTTCATTTGACAATTGCAGAAAATTTTGCTTGGAGGATTGCCGGTGCGAAGCATTTAGCTATAGGCTAACAGGGGAAGGTAGGTGTTATACAAAGAGTGCTCTTTTCAATGGGTACAAGTCTCCAAATTTTCCGGGGAGCATATACTTAAGACTGCCTATGAGTGTGGAAGCATCACTATCTACCAAACTAAATGCCTCTGACGCATGCAGCAGGACCAATGTGACCAAGGTTGTAGTAGGTTCTCCTTCCATGTATTCCATTAAAAGGTTAAGATGGGTGTATATGTATTGGTTTGCTTTTGCAGTTGGTGCGGTTGAAATTCTCTTCATACTTTCAGCTTGGTGGCTACTTTTCAGAAGACGTGGTGCAGCAGCTCCAATAGAAGATGGATATCATGTGATTTCAAGTCAATTTAGAATGTTTCACTATCCTGAGCTCAAGAAGGCAACCAAAAACTTCAAGGAAGAGCTGGGAAGAGGGGCTTCTGGGGCTGTTTACAAGGGTGTGCTGGCAGATGAAAGAGTGGTAGCTGTCAAGAAATTGGCAGATATATATCAAGGGGAAGATGTATTTTGGGCAGAAGTAAGCACAATTGGAAAAATCAACCACATGAACCTAGTGAGAATATGGGGATTCTGTTCAGATGATAAACACAGACTCCTAGTCTCTGAGTATGTTGAAAATGGTTCCTTGGACAAGCACCTCTTCCCCCAAAACTTTCTTGGATGGAATGAGAGGTTTAAAGTTGCAATAGGGATAGCTAAGGGTTTAGCCTATCTTCACCATGAGTGTCTAGAATGGGTTATCCATTGTGACGTGAAACCTGAGAACATACTCCTAGACAGTAACTTTGAGCCAAAGATTGCAGATTTCGGGCTAGCAAAGTTATCTCAGAGAGGCAGCCTCAGTTCAATGTTCTCTCGAATTCGCGGAACAAAAGGGTATATGGCTCCAGAGTGGGCTTTGAACCTTCCAATCACAGCCAAAGTGGATGTTTATAGTTATGGAGTGCTGATTTTAGAGATGGTGAAGGGGATCCGACTCTCGAGTTGGGTGGTGGAGGATAGTGATGATCAAGAAGCAGAGCTGACAAGGTTTGTGAGGGTGGCTAAAAAGAAAATCCGATGTGGGGAAGACCAATGGATAGAGGATATGTTGGATCCAAGGTTAGAAGGGCAGTTCAGCAGAAACCAAGCAGCAAAGATGGTTGAGATTGGTGTTTCCTGTGTGGAGGAAGATAGGAGCAAAAGACCAGCAATGGATTCAGTGGTACAAGAGTTGCTAGAATGTGCAGATGAATCTCATGCTGGTTCTCCACACAGGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

811

Amino Acids

91.39

Weight (kDa)

8.07

Isoelectric Point (pI)

34.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 281, 825
Acc65I GGTACC 1 cut(s) 6
AccB1I GGYRCC 1 cut(s) 6
AccII CGCG 1 cut(s) 2034
AciI CCGC 3 cut(s) 787, 1415, 2034
AclWI GGATC 5 cut(s) 641, 2134, 2147, 2258, 2271
AcsI RAATTY 7 cut(s) 415, 453, 1043, 1124, 1228, 1422, 2028
AfaI GTAC 4 cut(s) 8, 559, 1217, 2376
AfiI CCNNNNNNNGG 3 cut(s) 656, 1368, 2233
AflII CTTAAG 1 cut(s) 1249
AflIII ACRYGT 1 cut(s) 179
AhdI GACNNNNNGTC 1 cut(s) 1766
AjiI CACGTC 2 cut(s) 1466, 1921
AjnI CCWGG 2 cut(s) 860, 955
Alw21I GWGCWC 3 cut(s) 947, 1204, 1542
Alw26I GTCTC 4 cut(s) 267, 833, 1227, 1774
AlwI GGATC 5 cut(s) 641, 2134, 2147, 2258, 2271
Ama87I CYCGRG 1 cut(s) 2149
AoxI GGCC 1 cut(s) 641
ApeKI GCWGC 5 cut(s) 1311, 1472, 1475, 2004, 2300
ApoI RAATTY 7 cut(s) 415, 453, 1043, 1124, 1228, 1422, 2028
ArsI GACNNNNNNTTYG 2 cut(s) 1937, 1969
Asp718I GGTACC 1 cut(s) 6
AspLEI GCGC 1 cut(s) 353
AspS9I GGNCC 2 cut(s) 617, 1317
AsuC2I CCSGG 1 cut(s) 1236
AsuHPI GGTGA 4 cut(s) 850, 865, 1877, 2143
AsuII TTCGAA 1 cut(s) 313
AsuNHI GCTAGC 1 cut(s) 1981
AvaI CYCGRG 1 cut(s) 2149
AvaII GGWCC 2 cut(s) 617, 1317
BaeGI GKGCMC 1 cut(s) 203
BaeI ACNNNNGTAYC 2 cut(s) 2366, 2399
BamHI GGATCC 2 cut(s) 2139, 2263
BanI GGYRCC 1 cut(s) 6
BanII GRGCYC 1 cut(s) 1542
BbsI GAAGAC 2 cut(s) 1468, 2244
Bbv12I GWGCWC 3 cut(s) 947, 1204, 1542
BbvI GCAGC 5 cut(s) 1323, 1484, 1487, 2016, 2312
BciT130I CCWGG 2 cut(s) 862, 957
BclI TGATCA 2 cut(s) 855, 2176
BcnI CCSGG 1 cut(s) 1236
BcoDI GTCTC 4 cut(s) 267, 833, 1227, 1774
BfaI CTAG 6 cut(s) 1721, 1766, 1898, 1943, 1982, 2387
BfmI CTRYAG 2 cut(s) 1090, 1162
BfrI CTTAAG 1 cut(s) 1249
BglI GCCNNNNNGGC 1 cut(s) 957
BisI GCNGC 5 cut(s) 1312, 1473, 1476, 2005, 2301
BlsI GCNGC 5 cut(s) 1313, 1474, 1477, 2006, 2302
Bme1390I CCNGG 3 cut(s) 862, 957, 1236
Bme18I GGWCC 2 cut(s) 617, 1317
BmeRI GACNNNNNGTC 1 cut(s) 1766
BmeT110I CYCGRG 1 cut(s) 2149
BmgBI CACGTC 2 cut(s) 1466, 1921
BmgT120I GGNCC 2 cut(s) 617, 1317
BmiI GGNNCC 6 cut(s) 8, 298, 1792, 2055, 2141, 2265
BmrFI CCNGG 3 cut(s) 862, 957, 1236
BmsI GCATC 3 cut(s) 430, 906, 1283
BmtI GCTAGC 1 cut(s) 1985
BpiI GAAGAC 2 cut(s) 1468, 2244
BplI GAGNNNNNCTC 2 cut(s) 1992, 2024
BpmI CTGGAG 3 cut(s) 283, 364, 2040
Bpu10I CCTNAGC 2 cut(s) 1536, 1866
Bpu14I TTCGAA 1 cut(s) 313
BpuEI CTTGAG 2 cut(s) 584, 1526
BpuMI CCSGG 1 cut(s) 1236
BsaBI GATNNNNATC 2 cut(s) 1494, 1656
BsaJI CCNNGG 6 cut(s) 292, 861, 1235, 1329, 1794, 2267
BsaWI WCCGGW 1 cut(s) 39
BsaXI ACNNNNNCTCC 2 cut(s) 1746, 1776
Bsc4I CCNNNNNNNGG 3 cut(s) 656, 1368, 2233
Bse118I RCCGGY 1 cut(s) 1143
Bse1I ACTGG 4 cut(s) 218, 381, 565, 735
Bse3DI GCAATG 1 cut(s) 2367
Bse8I GATNNNNATC 2 cut(s) 1494, 1656
BseBI CCWGG 2 cut(s) 862, 957
BseDI CCNNGG 6 cut(s) 292, 861, 1235, 1329, 1794, 2267
BseGI GGATG 5 cut(s) 20, 267, 352, 1835, 2101
BseJI GATNNNNATC 2 cut(s) 1494, 1656
BseLI CCNNNNNNNGG 3 cut(s) 656, 1368, 2233
BseMI GCAATG 1 cut(s) 2367
BseMII CTCAG 6 cut(s) 144, 1527, 1764, 1920, 2009, 2023
BseNI ACTGG 4 cut(s) 218, 381, 565, 735
BseSI GKGCMC 1 cut(s) 203
BseXI GCAGC 5 cut(s) 1323, 1484, 1487, 2016, 2312
BseYI CCCAGC 2 cut(s) 1032, 1573
BsgI GTGCAG 3 cut(s) 1070, 1491, 2415
Bsh1236I CGCG 1 cut(s) 2034
BshFI GGCC 1 cut(s) 643
BshNI GGYRCC 1 cut(s) 6
BsiHKAI GWGCWC 3 cut(s) 947, 1204, 1542
BsiHKCI CYCGRG 1 cut(s) 2149
BsiSI CCGG 3 cut(s) 40, 1144, 1235
BslFI GGGAC 2 cut(s) 562, 1015
BslI CCNNNNNNNGG 3 cut(s) 656, 1368, 2233
BsmAI GTCTC 4 cut(s) 267, 833, 1227, 1774
BsmFI GGGAC 2 cut(s) 562, 1015
BsnI GGCC 1 cut(s) 643
BsoBI CYCGRG 1 cut(s) 2149
Bsp119I TTCGAA 1 cut(s) 313
Bsp1286I GDGCHC 4 cut(s) 203, 947, 1204, 1542
Bsp143I GATC 7 cut(s) 248, 646, 855, 1081, 2139, 2176, 2263
BspACI CCGC 3 cut(s) 787, 1415, 2034
BspANI GGCC 1 cut(s) 643
BspCNI CTCAG 6 cut(s) 143, 1528, 1765, 1921, 2008, 2022
BspFNI CGCG 1 cut(s) 2034
BspLI GGNNCC 6 cut(s) 8, 298, 1792, 2055, 2141, 2265
BspOI GCTAGC 1 cut(s) 1985
BspPI GGATC 5 cut(s) 641, 2134, 2147, 2258, 2271
BspQI GCTCTTC 2 cut(s) 127, 1563
BspT104I TTCGAA 1 cut(s) 313
BspT107I GGYRCC 1 cut(s) 6
BspTI CTTAAG 1 cut(s) 1249
BsrDI GCAATG 1 cut(s) 2367
BsrFI RCCGGY 1 cut(s) 1143
BsrI ACTGG 4 cut(s) 218, 381, 565, 735
BssAI RCCGGY 1 cut(s) 1143
BssECI CCNNGG 6 cut(s) 292, 861, 1235, 1329, 1794, 2267
BssMI GATC 7 cut(s) 248, 646, 855, 1081, 2139, 2176, 2263
BssT1I CCWWGG 4 cut(s) 292, 1329, 1794, 2267
Bst2UI CCWGG 2 cut(s) 862, 957
Bst4CI ACNGT 7 cut(s) 67, 80, 358, 692, 836, 1029, 1949
Bst6I CTCTTC 6 cut(s) 127, 538, 1433, 1563, 1573, 1814
BstAFI CTTAAG 1 cut(s) 1249
BstAPI GCANNNNNTGC 1 cut(s) 1412
BstBI TTCGAA 1 cut(s) 313
BstC8I GCNNGC 4 cut(s) 1001, 1309, 1614, 1983
BstDEI CTNAG 8 cut(s) 130, 815, 1536, 1773, 1866, 1929, 1995, 2009
BstF5I GGATG 5 cut(s) 20, 267, 352, 1835, 2101
BstFNI CGCG 1 cut(s) 2034
BstHHI GCGC 1 cut(s) 353
BstKTI GATC 7 cut(s) 251, 649, 858, 1084, 2142, 2179, 2266
BstMAI GTCTC 4 cut(s) 267, 833, 1227, 1774
BstMBI GATC 7 cut(s) 248, 646, 855, 1081, 2139, 2176, 2263
BstMWI GCNNNNNNNGC 5 cut(s) 957, 1057, 1304, 1412, 1592
BstNI CCWGG 2 cut(s) 862, 957
BstNSI RCATGY 3 cut(s) 183, 1023, 1311
BstSCI CCNGG 3 cut(s) 860, 955, 1234
BstSFI CTRYAG 2 cut(s) 1090, 1162
BstSLI GKGCMC 1 cut(s) 203
BstUI CGCG 1 cut(s) 2034
BstV1I GCAGC 5 cut(s) 1323, 1484, 1487, 2016, 2312
BstV2I GAAGAC 2 cut(s) 1468, 2244
BstX2I RGATCY 2 cut(s) 2139, 2263
BstYI RGATCY 2 cut(s) 2139, 2263
BsuRI GGCC 1 cut(s) 643
BtrI CACGTC 2 cut(s) 1466, 1921
BtsCI GGATG 5 cut(s) 20, 267, 352, 1835, 2101
BtsIMutI CAGTG 6 cut(s) 63, 76, 480, 742, 760, 2376
Cac8I GCNNGC 4 cut(s) 1001, 1309, 1614, 1983
CfoI GCGC 1 cut(s) 353
Cfr10I RCCGGY 1 cut(s) 1143
Cfr13I GGNCC 2 cut(s) 617, 1317
CseI GACGC 1 cut(s) 1313
Csp6I GTAC 4 cut(s) 7, 558, 1216, 2375
CviQI GTAC 4 cut(s) 7, 558, 1216, 2375
DdeI CTNAG 8 cut(s) 130, 815, 1536, 1773, 1866, 1929, 1995, 2009
DpnI GATC 7 cut(s) 250, 648, 857, 1083, 2141, 2178, 2265
DpnII GATC 7 cut(s) 248, 646, 855, 1081, 2139, 2176, 2263
DraI TTTAAA 2 cut(s) 669, 1846
DrdI GACNNNNNNGTC 2 cut(s) 281, 825
DriI GACNNNNNGTC 1 cut(s) 1766
DseDI GACNNNNNNGTC 2 cut(s) 281, 825
Eam1104I CTCTTC 6 cut(s) 127, 538, 1433, 1563, 1573, 1814
Eam1105I GACNNNNNGTC 1 cut(s) 1766
EarI CTCTTC 6 cut(s) 127, 538, 1433, 1563, 1573, 1814
Ecl136II GAGCTC 1 cut(s) 1540
Eco130I CCWWGG 4 cut(s) 292, 1329, 1794, 2267
Eco24I GRGCYC 1 cut(s) 1542
Eco32I GATATC 2 cut(s) 531, 1496
Eco47I GGWCC 2 cut(s) 617, 1317
Eco53kI GAGCTC 1 cut(s) 1540
Eco88I CYCGRG 1 cut(s) 2149
EcoICRI GAGCTC 1 cut(s) 1540
EcoRI GAATTC 2 cut(s) 415, 2028
EcoRII CCWGG 2 cut(s) 860, 955
EcoRV GATATC 2 cut(s) 531, 1496
EcoT14I CCWWGG 4 cut(s) 292, 1329, 1794, 2267
EcoT38I GRGCYC 1 cut(s) 1542
ErhI CCWWGG 4 cut(s) 292, 1329, 1794, 2267
FalI AAGNNNNNCTT 8 cut(s) 106, 138, 535, 567, 1570, 1602, 1793, 1825
FaqI GGGAC 2 cut(s) 562, 1015
FbaI TGATCA 2 cut(s) 855, 2176
Fnu4HI GCNGC 5 cut(s) 1312, 1473, 1476, 2005, 2301
FokI GGATG 5 cut(s) 7, 274, 359, 1842, 2108
FriOI GRGCYC 1 cut(s) 1542
Fsp4HI GCNGC 5 cut(s) 1312, 1473, 1476, 2005, 2301
FspBI CTAG 6 cut(s) 1721, 1766, 1898, 1943, 1982, 2387
GlaI GCGC 1 cut(s) 352
GluI GCNGC 5 cut(s) 1312, 1473, 1476, 2005, 2301
GsaI CCCAGC 2 cut(s) 1036, 1577
GsuI CTGGAG 3 cut(s) 283, 364, 2040
HaeIII GGCC 1 cut(s) 643
HapII CCGG 3 cut(s) 40, 1144, 1235
HgaI GACGC 1 cut(s) 1313
HhaI GCGC 1 cut(s) 353
Hin6I GCGC 1 cut(s) 351
HinP1I GCGC 1 cut(s) 351
HincII GTYRAC 2 cut(s) 792, 973
HindII GTYRAC 2 cut(s) 792, 973
HindIII AAGCTT 2 cut(s) 466, 631
HpaII CCGG 3 cut(s) 40, 1144, 1235
HphI GGTGA 4 cut(s) 850, 865, 1877, 2143
Hpy166II GTNNAC 5 cut(s) 231, 792, 973, 1097, 1600
Hpy8I GTNNAC 5 cut(s) 231, 792, 973, 1097, 1600
HpyAV CCTTC 7 cut(s) 500, 1172, 1359, 1540, 2084, 2128, 2270
HpyCH4III ACNGT 7 cut(s) 67, 80, 358, 692, 836, 1029, 1949
HpyCH4IV ACGT 2 cut(s) 1465, 1920
HpyF10VI GCNNNNNNNGC 5 cut(s) 957, 1057, 1304, 1412, 1592
HpyF3I CTNAG 8 cut(s) 130, 815, 1536, 1773, 1866, 1929, 1995, 2009
HpySE526I ACGT 2 cut(s) 1465, 1920
HspAI GCGC 1 cut(s) 351
KpnI GGTACC 1 cut(s) 10
Ksp22I TGATCA 2 cut(s) 855, 2176
Kzo9I GATC 7 cut(s) 248, 646, 855, 1081, 2139, 2176, 2263
LguI GCTCTTC 2 cut(s) 127, 1563
LmnI GCTCC 5 cut(s) 302, 1239, 1483, 2059, 2346
Lsp1109I GCAGC 5 cut(s) 1323, 1484, 1487, 2016, 2312
LweI GCATC 3 cut(s) 430, 906, 1283
MaeI CTAG 6 cut(s) 1721, 1766, 1898, 1943, 1982, 2387
MaeII ACGT 2 cut(s) 1465, 1920
MaeIII GTNAC 4 cut(s) 980, 1324, 1916, 1949
MalI GATC 7 cut(s) 250, 648, 857, 1083, 2141, 2178, 2265
MboI GATC 7 cut(s) 248, 646, 855, 1081, 2139, 2176, 2263
MfeI CAATTG 2 cut(s) 1114, 1695
MflI RGATCY 2 cut(s) 2139, 2263
MhlI GDGCHC 4 cut(s) 203, 947, 1204, 1542
MlyI GAGTC 5 cut(s) 137, 179, 710, 1755, 2139
MmeI TCCRAC 2 cut(s) 2167, 2241
MseI TTAA 6 cut(s) 668, 1011, 1250, 1365, 1373, 1845
MslI CAYNNNNRTG 1 cut(s) 65
MspCI CTTAAG 1 cut(s) 1249
MspI CCGG 3 cut(s) 40, 1144, 1235
MspR9I CCNGG 3 cut(s) 862, 957, 1236
MunI CAATTG 2 cut(s) 1114, 1695
MvaI CCWGG 2 cut(s) 862, 957
MvnI CGCG 1 cut(s) 2034
MwoI GCNNNNNNNGC 5 cut(s) 957, 1057, 1304, 1412, 1592
NciI CCSGG 1 cut(s) 1236
NdeII GATC 7 cut(s) 248, 646, 855, 1081, 2139, 2176, 2263
NheI GCTAGC 1 cut(s) 1981
NlaIV GGNNCC 6 cut(s) 8, 298, 1792, 2055, 2141, 2265
NmuCI GTSAC 2 cut(s) 1324, 1916
NspI RCATGY 3 cut(s) 183, 1023, 1311
NspV TTCGAA 1 cut(s) 313
PaeI GCATGC 1 cut(s) 1311
PaeR7I CTCGAG 1 cut(s) 2149
PciI ACATGT 1 cut(s) 179
PciSI GCTCTTC 2 cut(s) 127, 1563
PfeI GAWTC 5 cut(s) 846, 1054, 1737, 2366, 2402
PkrI GCNGC 5 cut(s) 1313, 1474, 1477, 2006, 2302
PleI GAGTC 5 cut(s) 137, 178, 710, 1755, 2139
PpsI GAGTC 5 cut(s) 137, 178, 710, 1755, 2139
PscI ACATGT 1 cut(s) 179
Psp124BI GAGCTC 1 cut(s) 1542
Psp6I CCWGG 2 cut(s) 860, 955
PspFI CCCAGC 2 cut(s) 1032, 1573
PspGI CCWGG 2 cut(s) 860, 955
PspN4I GGNNCC 6 cut(s) 8, 298, 1792, 2055, 2141, 2265
PspPI GGNCC 2 cut(s) 617, 1317
PsuI RGATCY 2 cut(s) 2139, 2263
RsaI GTAC 4 cut(s) 8, 559, 1217, 2376
RsaNI GTAC 4 cut(s) 7, 558, 1216, 2375
RseI CAYNNNNRTG 1 cut(s) 65
SacI GAGCTC 1 cut(s) 1542
SapI GCTCTTC 2 cut(s) 127, 1563
SaqAI TTAA 6 cut(s) 668, 1011, 1250, 1365, 1373, 1845
SatI GCNGC 5 cut(s) 1312, 1473, 1476, 2005, 2301
Sau3AI GATC 7 cut(s) 248, 646, 855, 1081, 2139, 2176, 2263
Sau96I GGNCC 2 cut(s) 617, 1317
SchI GAGTC 5 cut(s) 137, 179, 710, 1755, 2139
ScrFI CCNGG 3 cut(s) 862, 957, 1236
SduI GDGCHC 4 cut(s) 203, 947, 1204, 1542
SfaNI GCATC 3 cut(s) 430, 906, 1283
SfcI CTRYAG 2 cut(s) 1090, 1162
Sfr274I CTCGAG 1 cut(s) 2149
SfuI TTCGAA 1 cut(s) 313
SinI GGWCC 2 cut(s) 617, 1317
SlaI CTCGAG 1 cut(s) 2149
SmiMI CAYNNNNRTG 1 cut(s) 65
SmlI CTYRAG 4 cut(s) 599, 1249, 1541, 2149
SmoI CTYRAG 4 cut(s) 599, 1249, 1541, 2149
SphI GCATGC 1 cut(s) 1311
SsiI CCGC 3 cut(s) 787, 1415, 2034
SspMI CTAG 6 cut(s) 1721, 1766, 1898, 1943, 1982, 2387
SstI GAGCTC 1 cut(s) 1542
StyD4I CCNGG 3 cut(s) 860, 955, 1234
StyI CCWWGG 4 cut(s) 292, 1329, 1794, 2267
TaaI ACNGT 7 cut(s) 67, 80, 358, 692, 836, 1029, 1949
TaiI ACGT 2 cut(s) 1468, 1923
TaqI TCGA 3 cut(s) 313, 2026, 2150
TaqII GACCGA 1 cut(s) 353
TfiI GAWTC 5 cut(s) 846, 1054, 1737, 2366, 2402
Tru1I TTAA 6 cut(s) 668, 1011, 1250, 1365, 1373, 1845
Tru9I TTAA 6 cut(s) 668, 1011, 1250, 1365, 1373, 1845
TscAI CASTG 6 cut(s) 70, 83, 487, 742, 760, 2376
TseFI GTSAC 2 cut(s) 1324, 1916
TseI GCWGC 5 cut(s) 1311, 1472, 1475, 2004, 2300
Tsp45I GTSAC 2 cut(s) 1324, 1916
TspDTI ATGAA 6 cut(s) 9, 1095, 1420, 1635, 1730, 2415
TspRI CASTG 6 cut(s) 70, 83, 487, 742, 760, 2376
Vha464I CTTAAG 1 cut(s) 1249
VpaK11BI GGWCC 2 cut(s) 617, 1317
XapI RAATTY 7 cut(s) 415, 453, 1043, 1124, 1228, 1422, 2028
XbaI TCTAGA 1 cut(s) 1897
XceI RCATGY 3 cut(s) 183, 1023, 1311
XcmI CCANNNNNNNNNTGG 1 cut(s) 1823
XhoI CTCGAG 1 cut(s) 2149
XspI CTAG 6 cut(s) 1721, 1766, 1898, 1943, 1982, 2387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.