pycom12g14510

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0000166
Physical Location & Seq
Forward (+)
17033703 .. 17037546
3844 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g14510.2

Sequence Viewer

Length: 2880 bp
ATGGAAGATGGATATCACGTGATTTCAAGTCAGTTTAGAAGTTTTGCTATGCTAGGCTCACGTAAGCAACCAAAAACTTCAAGGAAGAGCTTGGAAGAGGAACCTCCGGTGCTGAGTACAAGGGCGTTCTGGCGGACGAAGGAGTGGTGGCTTAAGCACAAACTCCTTGTCTCTGAGCACGTCGAAAATGGCTCGTTGGACAAGCACCAGTTCCCCCCAAATTTCCTTGGATGGCAAGAAAGGTTTAAAGTTGGACGAAAGGATATATCATTTGGGGCTTTCGAGTTGGCTCTGAACCTTCCAATCACTGCGAAAGCGGATGTCTATAGTTACGGAGTGGTGATTCTAGAGATGGTGAAGGGCATTCGACTATCCAGTTGGGCACTGGAGAACACTGAGGATCAAGAATCGGAGCTGACTATCCAGTTCGTGAGGGTAGCGAAGCGGAAAATTCAATGCGGGGAAGATCGGTGGATCGAGGATATGATGGATTCAAAGCTGAATGGACAGTTCAGCAGGGAACAAGCAGCAAAGATGGTAGAGATTGGAATTTCCTCCACGGTTGGTCGGAGTCAAGCAGGGTTAATAGGGCTACAAAGCCTAAGGCCGGGGAGCTCTTTGACAGTTGAGGAAGAAGGTGACTTCTTGGTTTCGCCCAACGGAACTTTCTCTGCTGGATTTTACCGCGTTGGCAGCAGTGCATCTTGTTATTCAATATGGTTCACAAAGTCAGCCAATAAAACAGTGCTTTGGATGGCGAATAGAGACAGCCCGGTCAGCGTACGAGGATCCAAGCTAACCTTCCACAGAAGTGGCAACCTGGTCTTAACTGATGGGGTTGGATCGATTATATGGTCAACCAACACTTTCTCCAACACGGGCTTGGAAGCACGGCTTCTTGAGACCGGAAACTTGGTGCTGCTCAACCAAGAAAAGAAGGTCATCTGGCAGAGTTTTGATTTTCCCACGGATACACTTCTACCGTCACAGAAATTTGTCAAGAACACAACCTTGGTGTCTATGAGAAGTCAAGGTACATACTTATCTGGATTTTACAACTTCAAATTTGACGATAATAATGTACTAAAGCTTAGATACAATGGCGCTCTATTTTCAAGTGTTTATTGGCCAAAGACGGACCTAACTATTTTCGAGAGTGGTAGAACAATTTACAATAGTTCTAGACTAGCAATTCTGGATGAGGCCGGACAATTTATATCGAGTGACAATTTGATGTTCAATGCATCTGATTACGGGGTTGGTCCAAAACGCCGTTTAACAATGGATTATGATGGCATCTTAAGGTTGTACAGTCTAAATGAGTCATCCGGGTTTTGGGAACTGTCATGGTTGCCTGATGGTGTCGATGCGTGCTTGGTTCACGGCTTGTGTGGTGAATATGGTGTTTGCACTTACAAACCACAACCTAGTTGTGTTTGCCCTCATGGTTTCACCAGAAACGATCGATCAGATGGGTCGAAAGGCTGCTCGCCAGTGTTCAATTTGAGCCATGATTCGATCAATTCAGAATTCATGGAGCTTCCCAACACAGATTACCATGGATATGACTTGGAAACTTATTCTCCTAAAGTTTCTTTTCAAGAATGCCAGAAATTGTGCCAAAACGATACAAGATGTAAAGGGTTCGGATATACTCTGGATGGACTTGGACATTGTTTCCCTAAAAGTTTACTCCTTAACGGATTTAGCATGCCAAACACTCTCCAAATCATGCATATCAAAATTCCGAAAGGCTTTCTGAGCAATGAAGTCCTAAACGGGCCAGTAACATACGATTTGAACTGTTCAGCGGCACAAGTTGTTCTCCAAAGTAGCAATAAAAATCGGTACATGGATTACCTGATTGGTTTTGTGAGCTCATTTGCGGTAATTGAAGCAATCTGCATTGGCTTGACATGGTGGTACATCTTCCGAAAGCAGGCTAAAGAGGAATTTGTGAACATGGGTTACATAGCATTAGCCATGGGATTCAAGCGCTTCACGTACGCAGAACTAAAAAAAGCAACCAATAATTTCAAGCAGGAGATAGGAAAAGGAGGCTTTGGAACCGTGTATAAAGGGGTCCTAGACGACGAAAGAGTTGTAGCTGTGAAGAGACTAGATGGTGTCTTGCAAGGAGATGCAGAGTTTTGGGCAGAGGTGAGTGTGATAGGGAATATCAATCACCGAAACTTGGTTAAACTGTGGGGTTTCTGCGCAGACAATCAGCATAAGCTTCTCGTCTATGAGTACCTTGAGAATGGATCATTGGACAAAATCTTGTTCTCAGATGCGGAACTAGGATTGGAGCAGAGATACAAGATTGCGGTAGGCACTGCAAAGGGTTTGTCGTATTTACACGAGGAGTGCCTCGAGTGGGTGCTCCACTGCGATGTAAAGCCTCAAAACATACTGTTAGATGATCAGCTTGAACCTAAAGTGGCAGACTTTGGGATGTCAAAGCTATTCACAGATATCCATGGCATCAAAGACATGCAAGGGACAGGATTTTCAAAAGCGCGGGGCACCAGAGGTTATATGGCTCCAGAGTGGATGATGAACCTGAACATTGATGCCAAGGCGGATGTGTACAGCTATGGAATTGTTTTGCTGGAACTGCTGAGTGGAAAGAGCGCTTCGATTCTCATTTCAGCGCTTGCCAAAGAGTTCAATGAGTGCAACCAACTGGTTCAATATGTGACTGAAAAGATAAAAAAGGAAGGGCTTAAGCAAGTGATTGACCCAAGACTACTGCCTGAATTCGAATTGAAGAAGCTCGAAAGATTGATGAAAGTTGCCCTGTTGTGTGTTCACGAGGACCGCAATGCAAGGCCAGCCATGAGTAAGGTTGTCGAGATTCTGCTTGAAAATATTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

960

Amino Acids

108.17

Weight (kDa)

6.43

Isoelectric Point (pI)

39.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 773
Acc16I TGCGCA 1 cut(s) 2218
AccB1I GGYRCC 1 cut(s) 2525
AccII CGCG 2 cut(s) 687, 2521
AclWI GGATC 6 cut(s) 408, 482, 783, 796, 850, 2272
AcoI YGGCCR 1 cut(s) 1127
AcsI RAATTY 9 cut(s) 220, 450, 549, 992, 1064, 1529, 1743, 1952, 2759
AcvI CACGTG 1 cut(s) 19
AfeI AGCGCT 3 cut(s) 1997, 2635, 2655
AfiI CCNNNNNNNGG 5 cut(s) 607, 1335, 1939, 2194, 2377
AflII CTTAAG 3 cut(s) 152, 1300, 2726
AjiI CACGTC 1 cut(s) 181
AjnI CCWGG 1 cut(s) 819
AjuI GAANNNNNNNTTGG 8 cut(s) 650, 682, 785, 817, 995, 1027, 2252, 2284
AleI CACNNNNGTG 1 cut(s) 810
Alw21I GWGCWC 4 cut(s) 180, 617, 1880, 2385
Alw26I GTCTC 4 cut(s) 175, 759, 896, 2110
AlwI GGATC 6 cut(s) 408, 482, 783, 796, 850, 2272
Ama87I CYCGRG 1 cut(s) 2372
Aor51HI AGCGCT 3 cut(s) 1997, 2635, 2655
AoxI GGCC 5 cut(s) 605, 1127, 1203, 1781, 2831
ApeKI GCWGC 4 cut(s) 527, 693, 919, 1485
ApoI RAATTY 9 cut(s) 220, 450, 549, 992, 1064, 1529, 1743, 1952, 2759
ArsI GACNNNNNNTTYG 4 cut(s) 153, 185, 2333, 2365
AspLEI GCGC 6 cut(s) 1106, 1998, 2219, 2521, 2636, 2656
AspS9I GGNCC 5 cut(s) 1138, 1262, 1781, 2083, 2818
AsuC2I CCSGG 3 cut(s) 609, 773, 1330
AsuHPI GGTGA 7 cut(s) 352, 367, 650, 1406, 1444, 2173, 2177
AsuII TTCGAA 1 cut(s) 2763
AvaI CYCGRG 1 cut(s) 2372
AvaII GGWCC 4 cut(s) 1138, 1262, 2083, 2818
AxyI CCTNAGG 1 cut(s) 602
BaeGI GKGCMC 2 cut(s) 385, 2528
BalI TGGCCA 1 cut(s) 1129
BamHI GGATCC 1 cut(s) 788
BanI GGYRCC 1 cut(s) 2525
BanII GRGCYC 2 cut(s) 617, 1880
BarI GAAGNNNNNNTAC 2 cut(s) 1018, 1050
BauI CACGAG 2 cut(s) 2360, 2813
BbrPI CACGTG 1 cut(s) 19
Bbv12I GWGCWC 4 cut(s) 180, 617, 1880, 2385
BbvI GCAGC 4 cut(s) 539, 705, 906, 1472
BceAI ACGGC 3 cut(s) 908, 1257, 1399
BciT130I CCWGG 1 cut(s) 821
BciVI GTATCC 1 cut(s) 964
BclI TGATCA 1 cut(s) 2422
BcnI CCSGG 3 cut(s) 609, 773, 1330
BcoDI GTCTC 4 cut(s) 175, 759, 896, 2110
BfaI CTAG 8 cut(s) 53, 347, 1182, 1187, 1428, 2087, 2120, 2300
BfmI CTRYAG 1 cut(s) 325
BfoI RGCGCY 4 cut(s) 1107, 1999, 2637, 2657
BfrI CTTAAG 3 cut(s) 152, 1300, 2726
BfuI GTATCC 1 cut(s) 964
BisI GCNGC 5 cut(s) 528, 694, 920, 1486, 1812
BlsI GCNGC 5 cut(s) 529, 695, 921, 1487, 1813
Bme1390I CCNGG 4 cut(s) 609, 773, 821, 1330
Bme18I GGWCC 4 cut(s) 1138, 1262, 2083, 2818
BmeT110I CYCGRG 1 cut(s) 2372
BmgBI CACGTC 1 cut(s) 181
BmgT120I GGNCC 5 cut(s) 1138, 1262, 1781, 2083, 2818
BmiI GGNNCC 6 cut(s) 102, 790, 2068, 2084, 2527, 2544
BmrFI CCNGG 4 cut(s) 609, 773, 821, 1330
BmsI GCATC 8 cut(s) 710, 1253, 1305, 1357, 2131, 2281, 2493, 2563
BpmI CTGGAG 2 cut(s) 407, 2529
Bpu14I TTCGAA 1 cut(s) 2763
BpuEI CTTGAG 2 cut(s) 920, 2276
BpuMI CCSGG 3 cut(s) 609, 773, 1330
Bsa29I ATCGAT 2 cut(s) 845, 1465
BsaAI YACGTR 3 cut(s) 19, 62, 2004
BsaBI GATNNNNATC 1 cut(s) 12
BsaI GGTCTC 1 cut(s) 896
BsaJI CCNNGG 9 cut(s) 226, 558, 608, 966, 1011, 1558, 1983, 2479, 2577
BsaWI WCCGGW 2 cut(s) 106, 905
BsaXI ACNNNNNCTCC 4 cut(s) 854, 884, 1567, 1597
Bsc4I CCNNNNNNNGG 5 cut(s) 607, 1335, 1939, 2194, 2377
Bse1I ACTGG 7 cut(s) 208, 375, 390, 424, 1493, 1784, 2691
Bse21I CCTNAGG 1 cut(s) 602
Bse3DI GCAATG 2 cut(s) 1771, 2830
Bse8I GATNNNNATC 1 cut(s) 12
BseBI CCWGG 1 cut(s) 821
BseCI ATCGAT 2 cut(s) 845, 1465
BseDI CCNNGG 9 cut(s) 226, 558, 608, 966, 1011, 1558, 1983, 2479, 2577
BseGI GGATG 9 cut(s) 236, 325, 759, 1204, 1325, 1666, 2460, 2559, 2590
BseJI GATNNNNATC 1 cut(s) 12
BseLI CCNNNNNNNGG 5 cut(s) 607, 1335, 1939, 2194, 2377
BseMI GCAATG 2 cut(s) 1771, 2830
BseMII CTCAG 6 cut(s) 104, 165, 387, 1751, 2301, 2612
BseNI ACTGG 7 cut(s) 208, 375, 390, 424, 1493, 1784, 2691
BseRI GAGGAG 1 cut(s) 2378
BseSI GKGCMC 2 cut(s) 385, 2528
BseXI GCAGC 4 cut(s) 539, 705, 906, 1472
Bsh1236I CGCG 2 cut(s) 687, 2521
Bsh1285I CGRYCG 1 cut(s) 1465
BshFI GGCC 5 cut(s) 607, 1129, 1205, 1783, 2833
BshNI GGYRCC 1 cut(s) 2525
BshVI ATCGAT 2 cut(s) 845, 1465
BsiEI CGRYCG 1 cut(s) 1465
BsiHKAI GWGCWC 4 cut(s) 180, 617, 1880, 2385
BsiHKCI CYCGRG 1 cut(s) 2372
BsiSI CCGG 6 cut(s) 107, 608, 773, 906, 1206, 1329
BsiWI CGTACG 2 cut(s) 781, 2004
BslFI GGGAC 1 cut(s) 2515
BslI CCNNNNNNNGG 5 cut(s) 607, 1335, 1939, 2194, 2377
BsmAI GTCTC 4 cut(s) 175, 759, 896, 2110
BsmFI GGGAC 1 cut(s) 2515
BsmI GAATGC 2 cut(s) 363, 1610
BsnI GGCC 5 cut(s) 607, 1129, 1205, 1783, 2833
Bso31I GGTCTC 1 cut(s) 896
BsoBI CYCGRG 1 cut(s) 2372
Bsp119I TTCGAA 1 cut(s) 2763
Bsp1286I GDGCHC 6 cut(s) 180, 385, 617, 1880, 2385, 2528
Bsp1407I TGTACA 2 cut(s) 1308, 2589
Bsp19I CCATGG 3 cut(s) 1558, 1983, 2479
BspANI GGCC 5 cut(s) 607, 1129, 1205, 1783, 2833
BspCNI CTCAG 6 cut(s) 105, 166, 388, 1752, 2300, 2613
BspDI ATCGAT 2 cut(s) 845, 1465
BspFNI CGCG 2 cut(s) 687, 2521
BspLI GGNNCC 6 cut(s) 102, 790, 2068, 2084, 2527, 2544
BspPI GGATC 6 cut(s) 408, 482, 783, 796, 850, 2272
BspQI GCTCTTC 1 cut(s) 80
BspT104I TTCGAA 1 cut(s) 2763
BspT107I GGYRCC 1 cut(s) 2525
BspTI CTTAAG 3 cut(s) 152, 1300, 2726
BspTNI GGTCTC 1 cut(s) 896
BsrDI GCAATG 2 cut(s) 1771, 2830
BsrGI TGTACA 2 cut(s) 1308, 2589
BsrI ACTGG 7 cut(s) 208, 375, 390, 424, 1493, 1784, 2691
BssECI CCNNGG 9 cut(s) 226, 558, 608, 966, 1011, 1558, 1983, 2479, 2577
BssSI CACGAG 2 cut(s) 2360, 2813
BssT1I CCWWGG 6 cut(s) 226, 1011, 1558, 1983, 2479, 2577
Bst2BI CACGAG 2 cut(s) 2360, 2813
Bst2UI CCWGG 1 cut(s) 821
Bst6I CTCTTC 3 cut(s) 80, 90, 2108
BstAFI CTTAAG 3 cut(s) 152, 1300, 2726
BstAUI TGTACA 2 cut(s) 1308, 2589
BstBAI YACGTR 3 cut(s) 19, 62, 2004
BstBI TTCGAA 1 cut(s) 2763
BstC8I GCNNGC 6 cut(s) 1372, 1490, 1712, 1941, 2658, 2835
BstDEI CTNAG 8 cut(s) 113, 174, 396, 602, 1091, 1760, 2287, 2621
BstDSI CCRYGG 5 cut(s) 558, 966, 1558, 1983, 2479
BstF5I GGATG 9 cut(s) 236, 325, 759, 1204, 1325, 1666, 2460, 2559, 2590
BstFNI CGCG 2 cut(s) 687, 2521
BstH2I RGCGCY 4 cut(s) 1107, 1999, 2637, 2657
BstHHI GCGC 6 cut(s) 1106, 1998, 2219, 2521, 2636, 2656
BstMAI GTCTC 4 cut(s) 175, 759, 896, 2110
BstMCI CGRYCG 1 cut(s) 1465
BstMWI GCNNNNNNNGC 5 cut(s) 693, 777, 1761, 2617, 2834
BstNI CCWGG 1 cut(s) 821
BstNSI RCATGY 2 cut(s) 1714, 2497
BstSCI CCNGG 4 cut(s) 607, 771, 819, 1328
BstSFI CTRYAG 1 cut(s) 325
BstSLI GKGCMC 2 cut(s) 385, 2528
BstUI CGCG 2 cut(s) 687, 2521
BstV1I GCAGC 4 cut(s) 539, 705, 906, 1472
BstX2I RGATCY 1 cut(s) 788
BstXI CCANNNNNNTGG 1 cut(s) 812
BstYI RGATCY 1 cut(s) 788
Bsu15I ATCGAT 2 cut(s) 845, 1465
Bsu36I CCTNAGG 1 cut(s) 602
BsuI GTATCC 1 cut(s) 964
BsuRI GGCC 5 cut(s) 607, 1129, 1205, 1783, 2833
BsuTUI ATCGAT 2 cut(s) 845, 1465
BtgI CCRYGG 5 cut(s) 558, 966, 1558, 1983, 2479
BtgZI GCGATG 1 cut(s) 2406
BtrI CACGTC 1 cut(s) 181
BtsCI GGATG 9 cut(s) 236, 325, 759, 1204, 1325, 1666, 2460, 2559, 2590
BtsI GCAGTG 4 cut(s) 306, 703, 2334, 2386
BtsIMutI CAGTG 8 cut(s) 306, 383, 393, 703, 750, 1500, 2334, 2386
Cac8I GCNNGC 6 cut(s) 1372, 1490, 1712, 1941, 2658, 2835
CfoI GCGC 6 cut(s) 1106, 1998, 2219, 2521, 2636, 2656
Cfr13I GGNCC 5 cut(s) 1138, 1262, 1781, 2083, 2818
ClaI ATCGAT 2 cut(s) 845, 1465
CsiI ACCWGGT 1 cut(s) 819
DdeI CTNAG 8 cut(s) 113, 174, 396, 602, 1091, 1760, 2287, 2621
DraI TTTAAA 1 cut(s) 247
DrdI GACNNNNNNGTC 1 cut(s) 773
DseDI GACNNNNNNGTC 1 cut(s) 773
EaeI YGGCCR 1 cut(s) 1127
Eam1104I CTCTTC 3 cut(s) 80, 90, 2108
EarI CTCTTC 3 cut(s) 80, 90, 2108
EciI GGCGGA 2 cut(s) 148, 2597
Ecl136II GAGCTC 2 cut(s) 615, 1878
Eco130I CCWWGG 6 cut(s) 226, 1011, 1558, 1983, 2479, 2577
Eco24I GRGCYC 2 cut(s) 617, 1880
Eco31I GGTCTC 1 cut(s) 896
Eco32I GATATC 2 cut(s) 14, 2476
Eco47I GGWCC 4 cut(s) 1138, 1262, 2083, 2818
Eco47III AGCGCT 3 cut(s) 1997, 2635, 2655
Eco53kI GAGCTC 2 cut(s) 615, 1878
Eco72I CACGTG 1 cut(s) 19
Eco81I CCTNAGG 1 cut(s) 602
Eco88I CYCGRG 1 cut(s) 2372
EcoICRI GAGCTC 2 cut(s) 615, 1878
EcoO109I RGGNCCY 1 cut(s) 2083
EcoRI GAATTC 2 cut(s) 1529, 2759
EcoRII CCWGG 1 cut(s) 819
EcoRV GATATC 2 cut(s) 14, 2476
EcoT14I CCWWGG 6 cut(s) 226, 1011, 1558, 1983, 2479, 2577
EcoT22I ATGCAT 2 cut(s) 1246, 1737
EcoT38I GRGCYC 2 cut(s) 617, 1880
ErhI CCWWGG 6 cut(s) 226, 1011, 1558, 1983, 2479, 2577
FalI AAGNNNNNCTT 4 cut(s) 785, 817, 879, 911
FaqI GGGAC 1 cut(s) 2515
FauI CCCGC 2 cut(s) 452, 2514
FbaI TGATCA 1 cut(s) 2422
Fnu4HI GCNGC 5 cut(s) 528, 694, 920, 1486, 1812
FokI GGATG 9 cut(s) 243, 332, 766, 1211, 1312, 1673, 2467, 2566, 2597
FriOI GRGCYC 2 cut(s) 617, 1880
Fsp4HI GCNGC 5 cut(s) 528, 694, 920, 1486, 1812
FspBI CTAG 8 cut(s) 53, 347, 1182, 1187, 1428, 2087, 2120, 2300
FspI TGCGCA 1 cut(s) 2218
GlaI GCGC 6 cut(s) 1105, 1997, 2218, 2520, 2635, 2655
GluI GCNGC 5 cut(s) 528, 694, 920, 1486, 1812
GsuI CTGGAG 2 cut(s) 407, 2529
HaeII RGCGCY 4 cut(s) 1107, 1999, 2637, 2657
HaeIII GGCC 5 cut(s) 607, 1129, 1205, 1783, 2833
HapII CCGG 6 cut(s) 107, 608, 773, 906, 1206, 1329
HhaI GCGC 6 cut(s) 1106, 1998, 2219, 2521, 2636, 2656
Hin6I GCGC 6 cut(s) 1104, 1996, 2217, 2519, 2634, 2654
HinP1I GCGC 6 cut(s) 1104, 1996, 2217, 2519, 2634, 2654
HincII GTYRAC 1 cut(s) 858
HindII GTYRAC 1 cut(s) 858
HindIII AAGCTT 2 cut(s) 1088, 2234
HinfI GANTC 9 cut(s) 343, 407, 491, 571, 1322, 1514, 1989, 2641, 2857
HpaII CCGG 6 cut(s) 107, 608, 773, 906, 1206, 1329
HphI GGTGA 7 cut(s) 352, 367, 650, 1406, 1444, 2173, 2177
Hpy166II GTNNAC 7 cut(s) 723, 858, 1381, 1691, 1960, 2590, 2812
Hpy8I GTNNAC 7 cut(s) 723, 858, 1381, 1691, 1960, 2590, 2812
Hpy99I CGWCG 2 cut(s) 185, 2096
HpyAV CCTTC 7 cut(s) 133, 308, 352, 629, 811, 931, 2714
HpyCH4IV ACGT 4 cut(s) 18, 61, 180, 2003
HpyF10VI GCNNNNNNNGC 5 cut(s) 693, 777, 1761, 2617, 2834
HpyF3I CTNAG 8 cut(s) 113, 174, 396, 602, 1091, 1760, 2287, 2621
HpySE526I ACGT 4 cut(s) 18, 61, 180, 2003
HspAI GCGC 6 cut(s) 1104, 1996, 2217, 2519, 2634, 2654
Ksp22I TGATCA 1 cut(s) 2422
LguI GCTCTTC 1 cut(s) 80
LmnI GCTCC 6 cut(s) 412, 612, 1537, 2308, 2388, 2548
Lsp1109I GCAGC 4 cut(s) 539, 705, 906, 1472
LweI GCATC 8 cut(s) 710, 1253, 1305, 1357, 2131, 2281, 2493, 2563
MabI ACCWGGT 1 cut(s) 819
MaeI CTAG 8 cut(s) 53, 347, 1182, 1187, 1428, 2087, 2120, 2300
MaeII ACGT 4 cut(s) 18, 61, 180, 2003
MaeIII GTNAC 7 cut(s) 329, 638, 984, 1223, 1786, 1967, 2698
MboII GAAGA 8 cut(s) 17, 97, 107, 476, 644, 1921, 2125, 2782
MflI RGATCY 1 cut(s) 788
MhlI GDGCHC 6 cut(s) 180, 385, 617, 1880, 2385, 2528
MlsI TGGCCA 1 cut(s) 1129
MluNI TGGCCA 1 cut(s) 1129
MlyI GAGTC 2 cut(s) 580, 1331
MmeI TCCRAC 5 cut(s) 177, 232, 548, 820, 897
Mox20I TGGCCA 1 cut(s) 1129
Mph1103I ATGCAT 2 cut(s) 1246, 1737
MscI TGGCCA 1 cut(s) 1129
MseI TTAA 9 cut(s) 153, 246, 584, 827, 1277, 1301, 1698, 2199, 2727
MslI CAYNNNNRTG 3 cut(s) 810, 1563, 2391
Msp20I TGGCCA 1 cut(s) 1129
MspA1I CMGCKG 1 cut(s) 1811
MspCI CTTAAG 3 cut(s) 152, 1300, 2726
MspI CCGG 6 cut(s) 107, 608, 773, 906, 1206, 1329
MspR9I CCNGG 4 cut(s) 609, 773, 821, 1330
Mva1269I GAATGC 2 cut(s) 363, 1610
MvaI CCWGG 1 cut(s) 821
MvnI CGCG 2 cut(s) 687, 2521
MwoI GCNNNNNNNGC 5 cut(s) 693, 777, 1761, 2617, 2834
NciI CCSGG 3 cut(s) 609, 773, 1330
NcoI CCATGG 3 cut(s) 1558, 1983, 2479
NlaIV GGNNCC 6 cut(s) 102, 790, 2068, 2084, 2527, 2544
NmuCI GTSAC 4 cut(s) 638, 984, 1223, 2698
NsbI TGCGCA 1 cut(s) 2218
NsiI ATGCAT 2 cut(s) 1246, 1737
NspI RCATGY 2 cut(s) 1714, 2497
NspV TTCGAA 1 cut(s) 2763
OliI CACNNNNGTG 1 cut(s) 810
PaeI GCATGC 1 cut(s) 1714
PaeR7I CTCGAG 1 cut(s) 2372
PciSI GCTCTTC 1 cut(s) 80
PctI GAATGC 2 cut(s) 363, 1610
PfeI GAWTC 7 cut(s) 343, 407, 491, 1514, 1989, 2641, 2857
Pfl23II CGTACG 2 cut(s) 781, 2004
PkrI GCNGC 5 cut(s) 529, 695, 921, 1487, 1813
Ple19I CGATCG 1 cut(s) 1465
PleI GAGTC 2 cut(s) 579, 1330
PmaCI CACGTG 1 cut(s) 19
PmlI CACGTG 1 cut(s) 19
PpsI GAGTC 2 cut(s) 579, 1330
Ppu21I YACGTR 3 cut(s) 19, 62, 2004
PpuMI RGGWCCY 1 cut(s) 2083
Psp124BI GAGCTC 2 cut(s) 617, 1880
Psp5II RGGWCCY 1 cut(s) 2083
Psp6I CCWGG 1 cut(s) 819
PspCI CACGTG 1 cut(s) 19
PspGI CCWGG 1 cut(s) 819
PspLI CGTACG 2 cut(s) 781, 2004
PspN4I GGNNCC 6 cut(s) 102, 790, 2068, 2084, 2527, 2544
PspPI GGNCC 5 cut(s) 1138, 1262, 1781, 2083, 2818
PspPPI RGGWCCY 1 cut(s) 2083
PspXI VCTCGAGB 1 cut(s) 2372
PsrI GAACNNNNNNTAC 2 cut(s) 1952, 1984
PsuI RGATCY 1 cut(s) 788
PvuI CGATCG 1 cut(s) 1465
RseI CAYNNNNRTG 3 cut(s) 810, 1563, 2391
SacI GAGCTC 2 cut(s) 617, 1880
SapI GCTCTTC 1 cut(s) 80
SaqAI TTAA 9 cut(s) 153, 246, 584, 827, 1277, 1301, 1698, 2199, 2727
SatI GCNGC 5 cut(s) 528, 694, 920, 1486, 1812
Sau96I GGNCC 5 cut(s) 1138, 1262, 1781, 2083, 2818
SchI GAGTC 2 cut(s) 580, 1331
ScrFI CCNGG 4 cut(s) 609, 773, 821, 1330
SduI GDGCHC 6 cut(s) 180, 385, 617, 1880, 2385, 2528
SexAI ACCWGGT 1 cut(s) 819
SfaNI GCATC 8 cut(s) 710, 1253, 1305, 1357, 2131, 2281, 2493, 2563
SfcI CTRYAG 1 cut(s) 325
Sfr274I CTCGAG 1 cut(s) 2372
SfuI TTCGAA 1 cut(s) 2763
SinI GGWCC 4 cut(s) 1138, 1262, 2083, 2818
SlaI CTCGAG 1 cut(s) 2372
SmiMI CAYNNNNRTG 3 cut(s) 810, 1563, 2391
SmlI CTYRAG 6 cut(s) 152, 899, 1300, 2255, 2372, 2726
SmoI CTYRAG 6 cut(s) 152, 899, 1300, 2255, 2372, 2726
SphI GCATGC 1 cut(s) 1714
SspI AATATT 1 cut(s) 2872
SspMI CTAG 8 cut(s) 53, 347, 1182, 1187, 1428, 2087, 2120, 2300
SstI GAGCTC 2 cut(s) 617, 1880
StyD4I CCNGG 4 cut(s) 607, 771, 819, 1328
StyI CCWWGG 6 cut(s) 226, 1011, 1558, 1983, 2479, 2577
TaiI ACGT 4 cut(s) 21, 64, 183, 2006
TatI WGTACW 4 cut(s) 116, 1081, 1308, 2589
TauI GCSGC 1 cut(s) 1814
TfiI GAWTC 7 cut(s) 343, 407, 491, 1514, 1989, 2641, 2857
Tru1I TTAA 9 cut(s) 153, 246, 584, 827, 1277, 1301, 1698, 2199, 2727
Tru9I TTAA 9 cut(s) 153, 246, 584, 827, 1277, 1301, 1698, 2199, 2727
TscAI CASTG 8 cut(s) 313, 390, 400, 703, 750, 1500, 2341, 2393
TseFI GTSAC 4 cut(s) 638, 984, 1223, 2698
TseI GCWGC 4 cut(s) 527, 693, 919, 1485
Tsp45I GTSAC 4 cut(s) 638, 984, 1223, 2698
TspDTI ATGAA 4 cut(s) 1522, 1782, 2573, 2804
TspGWI ACGGA 5 cut(s) 348, 675, 983, 1151, 1716
TspRI CASTG 8 cut(s) 313, 390, 400, 703, 750, 1500, 2341, 2393
Vha464I CTTAAG 3 cut(s) 152, 1300, 2726
VpaK11BI GGWCC 4 cut(s) 1138, 1262, 2083, 2818
XapI RAATTY 9 cut(s) 220, 450, 549, 992, 1064, 1529, 1743, 1952, 2759
XbaI TCTAGA 2 cut(s) 346, 1181
XceI RCATGY 2 cut(s) 1714, 2497
XcmI CCANNNNNNNNNTGG 3 cut(s) 382, 880, 2536
XhoI CTCGAG 1 cut(s) 2372
XspI CTAG 8 cut(s) 53, 347, 1182, 1187, 1428, 2087, 2120, 2300
Zsp2I ATGCAT 2 cut(s) 1246, 1737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.