Prupe.5G116800_v2.0.a1

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000166
Physical Location & Seq
Reverse (-)
11858303 .. 11861819
3517 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G116800.1

Sequence Viewer

Length: 2412 bp
ATGGCATACCACCAAACCGCGTCATCTCCAAAATTTCCCTGCTTTCTTATTCTTCTAGTCATCACTGTATTTTGTTGTTGTTTTGCAACAGCAAAAACCCAGAAGAGTTTAAAAAGAGGCTCTTCTTTTTCAGTTGAAGATGATTCTGGTTTCCTAACTTCCCCACATAAGTCTTTTACATGTGGGTTCTATGGGGTGGGCACAAATGCCTACTGGTTCTCCATTTGGTTCACAAATTCCGAGAACAAGACCCTTGTTTGGATGGCTAACAGAGACAGACCAGTCAATGCTTTGGGGTCCAGAGTTTCACTGAGTCGAGATGGCACCATGATCTTGACTGATGTGGACGGCAAAATTGTCTGGGATAGCAGCACCAACTCAACTCCCACTGGTGCTGAAAGGGCGGAGCTTTTGAATTCTGGCAACCTTGTTTTGAAAAACCCACTAGGTAAAATTCTCTGGCAAAGCTTTGATTTTCCCACTGATACTCTCCTCCCAAATCAACCCTTTACAAAGACCATGAAGCTGACATCTAGTTTGGGAAGAGGCAACTTTGGTACTGGATATTTTAGTTTCTATTTTGATAATGACAATGTTTTGAGGTTGATTTATGATGGTCCTGACATATCAAGTGTGTATTGGCCTGGGCCTGGTTTGAGTGTATATCAGAATGGTAGAACAGACTACAATAGTAGTAGAATTGCTGTTTTTGATGAAATGGGCAATTTTGTATCCAGTGATGACTTGATATTCAGTGCTTCTGACATGGGTGCAAGGGTGAAACGAAGGTTGACAACGGATTATGATGGAAACCTGAGACTTTATAGTCTAAACTCGACAGGATCATGGGTGATCACCTGGGAAGCTCTAGCACAGCAGTGCAGGGTGCATGGGATCTGTGGGAGAAATGGGATTTGTGTTTATACACCAGAGCTTAAGTGCTCGTGCCTTCCTGGCTATGAGGCAGTGGATACAAGTAACTGGAACAAGGGTTGCAAGCCTAAGTTCAAGCCTACATGCTCTCAGTCCCAGAGAGTGAAATTCAAGCAGATTCAGTACGTAGATTTCTATGGATTTGATCTCAATTACAGTGAATCCACTTCCATTCAGAATTGCACAAAACTCTGTGTCGAGGATTGCCGTTGTGAAGCATTTGTCTATAGGGGACAGAAGTGTTACACAAAAGGTGCTCTCTTCAGTGGGCTCAGGTCTCCAACTATCGAGGGCAGTCTATACTTAAGGCTGCCTGAGCCTCTGAGTATGGAAACCTCACCAGCGGCCAATCTCACTGTATTTAATTCATGCAGGACTAATGCTGTTAAAATAGGTACTTCTTCAATGTATGACAATCCCAGTAAAACGGTGAGATGGGTATATCTGTATTCTTTTGCTGCTGCAATCGGTGCTGTTGAATTTCTCTTCATATTATCAGGTTGGTGGTTCTTTTTCAGAAGATCACAAGGTATGTCAGCTCCCTTGGTAGATAAATATCGCTTGATTTCAAGTAACTTTAGAATGTATCTCTATGCTGAGCTGAAGAAAGCAACCAGAAACTTCAAGGAAGAACTGGGAAGAGGGGGTTCTGGGACTGTATATAAGGGTGTTTTGGCCGATGAAAGAGTGATAGCTGTCAAGGCATTGGCAGATATTTATCAAGCGGAAGAAGTATTTTGGGCAGAAGTCAGCACAATTGAAAAAATCAATCACATGAACCTAGTGAGAACTTGGGGATTCTGTTCTGAAGGTAAACACAGACTTCTAATCTCTGAATATGTTGAAAATGGATCCTTGGATAAGCACTTGTTTCCCCCAAATTTTCTTGGATGGAAAGAGAGGTTCAAAGTTGCAATCGGGATAGCTAAAGGTTTAGCCTATCTTCACCATGAGTGTCTAGAATGGGTTATCCATTGTGATGTGAAGCCTGAAAATATACTCCTAGACAGTAATTTTGAACCAAAGATTGCAGATTTCGGGCTGGCAAAGTTATTCCAGAGAGGCGGCCTCAATGCAGTGTCCTCTCACATTCGAGGAACAAAAGGGTATATGGCCCCGGAGTGGGCTCTGAACCTTTCAATCACTGCAAAAGTGGATGTTTACAGTTATGGTGTAGTGCTTCTAGAGATAGTGAAGGGCATTCGACTTTCAAATCGGGTGGTGGATACTGCTGAGGAGGAAGAAGCAGAGATGAAGAGGTTTGTCAGGATAGCCAGAAGGAAAATTCAATGTGGGGAAGATGAATGGATAGAGGATATGTTGGATCCAAGATTGGAAGGGCAGTTCGGCAGGAACCAAGCAGCAAAGATGGTTGAGGTTGGTATTTCCTGTGTAGAGGAAGATAGGAACAAAAGACCAACAATGGATTCAGTAGTGCAAATGTTGCTAGAATGTGAAGAGGAATCCAACATTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

804

Amino Acids

90.58

Weight (kDa)

7.88

Isoelectric Point (pI)

35.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 281, 825
AccB1I GGYRCC 1 cut(s) 323
AccII CGCG 1 cut(s) 20
AciI CCGC 5 cut(s) 18, 404, 1277, 1658, 1998
AclWI GGATC 6 cut(s) 850, 902, 1779, 1792, 2252, 2265
AcoI YGGCCR 2 cut(s) 1278, 1608
AcsI RAATTY 8 cut(s) 32, 235, 415, 453, 1040, 1412, 1813, 2217
AcuI CTGAAG 3 cut(s) 1180, 1556, 1761
AfaI GTAC 3 cut(s) 559, 1058, 1330
AfiI CCNNNNNNNGG 4 cut(s) 258, 650, 2055, 2056
AflII CTTAAG 2 cut(s) 935, 1237
AflIII ACRYGT 1 cut(s) 179
AjnI CCWGG 4 cut(s) 643, 649, 857, 952
AjuI GAANNNNNNNTTGG 2 cut(s) 2344, 2376
AleI CACNNNNGTG 1 cut(s) 877
AloI GAACNNNNNNTCC 2 cut(s) 2261, 2293
AluBI AGCT 9 cut(s) 409, 468, 526, 866, 934, 1472, 1534, 1628, 1859
AluI AGCT 9 cut(s) 409, 468, 526, 866, 934, 1472, 1534, 1628, 1859
Alw21I GWGCWC 2 cut(s) 944, 1192
Alw26I GTCTC 3 cut(s) 267, 811, 1215
AlwI GGATC 6 cut(s) 850, 902, 1779, 1792, 2252, 2265
AoxI GGCC 6 cut(s) 641, 647, 1278, 1608, 1999, 2046
ApeKI GCWGC 5 cut(s) 369, 1243, 1391, 1394, 2294
ApoI RAATTY 8 cut(s) 32, 235, 415, 453, 1040, 1412, 1813, 2217
ArsI GACNNNNNNTTYG 4 cut(s) 520, 552, 1931, 1963
AspS9I GGNCC 4 cut(s) 297, 617, 647, 2047
AsuC2I CCSGG 1 cut(s) 2051
AsuHPI GGTGA 6 cut(s) 790, 847, 862, 1263, 1375, 1871
AvaII GGWCC 2 cut(s) 297, 617
BaeGI GKGCMC 1 cut(s) 203
BamHI GGATCC 2 cut(s) 1784, 2257
BanI GGYRCC 1 cut(s) 323
BanII GRGCYC 2 cut(s) 1206, 2062
BauI CACGAG 1 cut(s) 943
Bbv12I GWGCWC 2 cut(s) 944, 1192
BbvCI CCTCAGC 1 cut(s) 2166
BbvI GCAGC 5 cut(s) 381, 1230, 1378, 1381, 2306
BccI CCATC 7 cut(s) 256, 314, 608, 800, 1362, 1818, 2296
BceAI ACGGC 2 cut(s) 364, 1125
BciT130I CCWGG 4 cut(s) 645, 651, 859, 954
BciVI GTATCC 3 cut(s) 742, 964, 2152
BclI TGATCA 1 cut(s) 852
BcnI CCSGG 1 cut(s) 2051
BcoDI GTCTC 3 cut(s) 267, 811, 1215
BfaI CTAG 9 cut(s) 56, 446, 534, 869, 1715, 1892, 1937, 2117, 2381
BfmI CTRYAG 1 cut(s) 1159
BfrI CTTAAG 2 cut(s) 935, 1237
BfuI GTATCC 3 cut(s) 742, 964, 2152
BglI GCCNNNNNGGC 1 cut(s) 954
BisI GCNGC 7 cut(s) 370, 1244, 1278, 1392, 1395, 1999, 2295
BlpI GCTNAGC 1 cut(s) 1530
BlsI GCNGC 7 cut(s) 371, 1245, 1279, 1393, 1396, 2000, 2296
Bme1390I CCNGG 5 cut(s) 645, 651, 859, 954, 2051
Bme18I GGWCC 2 cut(s) 297, 617
BmgT120I GGNCC 4 cut(s) 297, 617, 647, 2047
BmiI GGNNCC 6 cut(s) 298, 325, 1786, 2049, 2259, 2288
BmrFI CCNGG 5 cut(s) 645, 651, 859, 954, 2051
BmrI ACTGGG 2 cut(s) 1347, 1577
BmuI ACTGGG 2 cut(s) 1347, 1577
BplI GAGNNNNNCTC 2 cut(s) 1986, 2018
Bpu10I CCTNAGC 3 cut(s) 1205, 1248, 2166
Bpu1102I GCTNAGC 1 cut(s) 1530
BpuMI CCSGG 1 cut(s) 2051
BsaAI YACGTR 1 cut(s) 1060
BsaBI GATNNNNATC 2 cut(s) 1488, 1650
BsaI GGTCTC 1 cut(s) 1215
BsaJI CCNNGG 5 cut(s) 644, 858, 1476, 1788, 2049
BsaXI ACNNNNNCTCC 2 cut(s) 203, 233
Bsc4I CCNNNNNNNGG 4 cut(s) 258, 650, 2055, 2056
Bse1I ACTGG 8 cut(s) 218, 281, 394, 565, 735, 986, 1353, 1572
Bse8I GATNNNNATC 2 cut(s) 1488, 1650
BseBI CCWGG 4 cut(s) 645, 651, 859, 954
BseDI CCNNGG 5 cut(s) 644, 858, 1476, 1788, 2049
BseGI GGATG 3 cut(s) 267, 1829, 2095
BseJI GATNNNNATC 2 cut(s) 1488, 1650
BseLI CCNNNNNNNGG 4 cut(s) 258, 650, 2055, 2056
BseMII CTCAG 8 cut(s) 302, 806, 1037, 1219, 1239, 1247, 1521, 2157
BseNI ACTGG 8 cut(s) 218, 281, 394, 565, 735, 986, 1353, 1572
BseRI GAGGAG 2 cut(s) 482, 2183
BseSI GKGCMC 1 cut(s) 203
BseXI GCAGC 5 cut(s) 381, 1230, 1378, 1381, 2306
BsgI GTGCAG 1 cut(s) 901
Bsh1236I CGCG 1 cut(s) 20
BshFI GGCC 6 cut(s) 643, 649, 1280, 1610, 2001, 2048
BshNI GGYRCC 1 cut(s) 323
BsiHKAI GWGCWC 2 cut(s) 944, 1192
BsiSI CCGG 1 cut(s) 2051
BslFI GGGAC 3 cut(s) 1012, 1179, 1600
BslI CCNNNNNNNGG 4 cut(s) 258, 650, 2055, 2056
BsmAI GTCTC 3 cut(s) 267, 811, 1215
BsmFI GGGAC 3 cut(s) 1012, 1179, 1600
BsmI GAATGC 1 cut(s) 2133
BsnI GGCC 6 cut(s) 643, 649, 1280, 1610, 2001, 2048
Bso31I GGTCTC 1 cut(s) 1215
Bsp1286I GDGCHC 5 cut(s) 203, 944, 1192, 1206, 2062
Bsp143I GATC 8 cut(s) 330, 842, 852, 894, 1078, 1454, 1784, 2257
Bsp1720I GCTNAGC 1 cut(s) 1530
BspACI CCGC 5 cut(s) 18, 404, 1277, 1658, 1998
BspANI GGCC 6 cut(s) 643, 649, 1280, 1610, 2001, 2048
BspCNI CTCAG 8 cut(s) 303, 807, 1036, 1218, 1240, 1248, 1522, 2158
BspFNI CGCG 1 cut(s) 20
BspLI GGNNCC 6 cut(s) 298, 325, 1786, 2049, 2259, 2288
BspPI GGATC 6 cut(s) 850, 902, 1779, 1792, 2252, 2265
BspQI GCTCTTC 1 cut(s) 127
BspT107I GGYRCC 1 cut(s) 323
BspTI CTTAAG 2 cut(s) 935, 1237
BspTNI GGTCTC 1 cut(s) 1215
BsrI ACTGG 8 cut(s) 218, 281, 394, 565, 735, 986, 1353, 1572
BssECI CCNNGG 5 cut(s) 644, 858, 1476, 1788, 2049
BssMI GATC 8 cut(s) 330, 842, 852, 894, 1078, 1454, 1784, 2257
BssSI CACGAG 1 cut(s) 943
BssT1I CCWWGG 2 cut(s) 1476, 1788
Bst2BI CACGAG 1 cut(s) 943
Bst2UI CCWGG 4 cut(s) 645, 651, 859, 954
Bst4CI ACNGT 7 cut(s) 67, 1091, 1291, 1363, 1591, 1943, 2099
Bst6I CTCTTC 8 cut(s) 98, 127, 538, 1199, 1424, 1567, 2183, 2385
BstAFI CTTAAG 2 cut(s) 935, 1237
BstAPI GCANNNNNTGC 2 cut(s) 1403, 2377
BstBAI YACGTR 1 cut(s) 1060
BstC8I GCNNGC 2 cut(s) 998, 1977
BstDEI CTNAG 9 cut(s) 311, 815, 1002, 1023, 1205, 1248, 1256, 1530, 2166
BstF5I GGATG 3 cut(s) 267, 1829, 2095
BstFNI CGCG 1 cut(s) 20
BstKTI GATC 8 cut(s) 333, 845, 855, 897, 1081, 1457, 1787, 2260
BstMAI GTCTC 3 cut(s) 267, 811, 1215
BstMBI GATC 8 cut(s) 330, 842, 852, 894, 1078, 1454, 1784, 2257
BstMWI GCNNNNNNNGC 6 cut(s) 401, 954, 1249, 1403, 1634, 2377
BstNI CCWGG 4 cut(s) 645, 651, 859, 954
BstNSI RCATGY 2 cut(s) 183, 1020
BstSCI CCNGG 5 cut(s) 643, 649, 857, 952, 2049
BstSFI CTRYAG 1 cut(s) 1159
BstSLI GKGCMC 1 cut(s) 203
BstSNI TACGTA 1 cut(s) 1060
BstUI CGCG 1 cut(s) 20
BstV1I GCAGC 5 cut(s) 381, 1230, 1378, 1381, 2306
BstX2I RGATCY 3 cut(s) 894, 1784, 2257
BstYI RGATCY 3 cut(s) 894, 1784, 2257
BsuI GTATCC 3 cut(s) 742, 964, 2152
BsuRI GGCC 6 cut(s) 643, 649, 1280, 1610, 2001, 2048
BtsCI GGATG 3 cut(s) 267, 1829, 2095
BtsI GCAGTG 4 cut(s) 884, 972, 2016, 2076
Cac8I GCNNGC 2 cut(s) 998, 1977
Cfr13I GGNCC 4 cut(s) 297, 617, 647, 2047
CseI GACGC 1 cut(s) 9
Csp6I GTAC 3 cut(s) 558, 1057, 1329
CspCI CAANNNNNGTGG 2 cut(s) 2133, 2168
CviQI GTAC 3 cut(s) 558, 1057, 1329
DdeI CTNAG 9 cut(s) 311, 815, 1002, 1023, 1205, 1248, 1256, 1530, 2166
DpnI GATC 8 cut(s) 332, 844, 854, 896, 1080, 1456, 1786, 2259
DpnII GATC 8 cut(s) 330, 842, 852, 894, 1078, 1454, 1784, 2257
DraI TTTAAA 1 cut(s) 111
DrdI GACNNNNNNGTC 2 cut(s) 281, 825
DseDI GACNNNNNNGTC 2 cut(s) 281, 825
EaeI YGGCCR 2 cut(s) 1278, 1608
Eam1104I CTCTTC 8 cut(s) 98, 127, 538, 1199, 1424, 1567, 2183, 2385
EarI CTCTTC 8 cut(s) 98, 127, 538, 1199, 1424, 1567, 2183, 2385
EciI GGCGGA 1 cut(s) 419
Eco105I TACGTA 1 cut(s) 1060
Eco130I CCWWGG 2 cut(s) 1476, 1788
Eco24I GRGCYC 2 cut(s) 1206, 2062
Eco31I GGTCTC 1 cut(s) 1215
Eco47I GGWCC 2 cut(s) 297, 617
Eco57I CTGAAG 3 cut(s) 1180, 1556, 1761
EcoRI GAATTC 1 cut(s) 415
EcoRII CCWGG 4 cut(s) 643, 649, 857, 952
EcoT14I CCWWGG 2 cut(s) 1476, 1788
EcoT38I GRGCYC 2 cut(s) 1206, 2062
ErhI CCWWGG 2 cut(s) 1476, 1788
FalI AAGNNNNNCTT 2 cut(s) 106, 138
FaqI GGGAC 3 cut(s) 1012, 1179, 1600
FbaI TGATCA 1 cut(s) 852
Fnu4HI GCNGC 7 cut(s) 370, 1244, 1278, 1392, 1395, 1999, 2295
FokI GGATG 3 cut(s) 274, 1836, 2102
FriOI GRGCYC 2 cut(s) 1206, 2062
Fsp4HI GCNGC 7 cut(s) 370, 1244, 1278, 1392, 1395, 1999, 2295
FspBI CTAG 9 cut(s) 56, 446, 534, 869, 1715, 1892, 1937, 2117, 2381
GluI GCNGC 7 cut(s) 370, 1244, 1278, 1392, 1395, 1999, 2295
HaeIII GGCC 6 cut(s) 643, 649, 1280, 1610, 2001, 2048
HapII CCGG 1 cut(s) 2051
HgaI GACGC 1 cut(s) 9
HincII GTYRAC 1 cut(s) 792
HindII GTYRAC 1 cut(s) 792
HindIII AAGCTT 1 cut(s) 466
HinfI GANTC 7 cut(s) 143, 313, 1051, 1094, 1731, 2360, 2396
HpaII CCGG 1 cut(s) 2051
HphI GGTGA 6 cut(s) 790, 847, 862, 1263, 1375, 1871
Hpy166II GTNNAC 5 cut(s) 231, 346, 792, 1748, 2095
Hpy188I TCNGA 9 cut(s) 241, 669, 763, 1110, 1257, 1451, 1741, 1768, 2064
Hpy188III TCNNGA 9 cut(s) 300, 317, 334, 620, 1852, 1892, 1990, 2117, 2200
Hpy8I GTNNAC 5 cut(s) 231, 346, 792, 1748, 2095
HpyAV CCTTC 6 cut(s) 780, 959, 1736, 2122, 2205, 2264
HpyCH4III ACNGT 7 cut(s) 67, 1091, 1291, 1363, 1591, 1943, 2099
HpyCH4IV ACGT 1 cut(s) 1059
HpyF10VI GCNNNNNNNGC 6 cut(s) 401, 954, 1249, 1403, 1634, 2377
HpyF3I CTNAG 9 cut(s) 311, 815, 1002, 1023, 1205, 1248, 1256, 1530, 2166
HpySE526I ACGT 1 cut(s) 1059
Ksp22I TGATCA 1 cut(s) 852
Kzo9I GATC 8 cut(s) 330, 842, 852, 894, 1078, 1454, 1784, 2257
LguI GCTCTTC 1 cut(s) 127
LmnI GCTCC 2 cut(s) 406, 1477
Lsp1109I GCAGC 5 cut(s) 381, 1230, 1378, 1381, 2306
MaeI CTAG 9 cut(s) 56, 446, 534, 869, 1715, 1892, 1937, 2117, 2381
MaeII ACGT 1 cut(s) 1059
MaeIII GTNAC 3 cut(s) 977, 1175, 1505
MalI GATC 8 cut(s) 332, 844, 854, 896, 1080, 1456, 1786, 2259
MboI GATC 8 cut(s) 330, 842, 852, 894, 1078, 1454, 1784, 2257
MfeI CAATTG 1 cut(s) 1689
MflI RGATCY 3 cut(s) 894, 1784, 2257
MhlI GDGCHC 5 cut(s) 203, 944, 1192, 1206, 2062
MlyI GAGTC 1 cut(s) 322
MmeI TCCRAC 2 cut(s) 1238, 2235
MseI TTAA 5 cut(s) 110, 936, 1238, 1296, 1320
MslI CAYNNNNRTG 2 cut(s) 877, 1911
MspA1I CMGCKG 1 cut(s) 1277
MspCI CTTAAG 2 cut(s) 935, 1237
MspI CCGG 1 cut(s) 2051
MspR9I CCNGG 5 cut(s) 645, 651, 859, 954, 2051
MunI CAATTG 1 cut(s) 1689
Mva1269I GAATGC 1 cut(s) 2133
MvaI CCWGG 4 cut(s) 645, 651, 859, 954
MvnI CGCG 1 cut(s) 20
MwoI GCNNNNNNNGC 6 cut(s) 401, 954, 1249, 1403, 1634, 2377
NciI CCSGG 1 cut(s) 2051
NdeII GATC 8 cut(s) 330, 842, 852, 894, 1078, 1454, 1784, 2257
NlaIV GGNNCC 6 cut(s) 298, 325, 1786, 2049, 2259, 2288
NspI RCATGY 2 cut(s) 183, 1020
OliI CACNNNNGTG 1 cut(s) 877
PciI ACATGT 1 cut(s) 179
PciSI GCTCTTC 1 cut(s) 127
PctI GAATGC 1 cut(s) 2133
PfeI GAWTC 6 cut(s) 143, 1051, 1094, 1731, 2360, 2396
PkrI GCNGC 7 cut(s) 371, 1245, 1279, 1393, 1396, 2000, 2296
PleI GAGTC 1 cut(s) 321
PpsI GAGTC 1 cut(s) 321
Ppu21I YACGTR 1 cut(s) 1060
PscI ACATGT 1 cut(s) 179
Psp6I CCWGG 4 cut(s) 643, 649, 857, 952
PspGI CCWGG 4 cut(s) 643, 649, 857, 952
PspN4I GGNNCC 6 cut(s) 298, 325, 1786, 2049, 2259, 2288
PspPI GGNCC 4 cut(s) 297, 617, 647, 2047
PsuI RGATCY 3 cut(s) 894, 1784, 2257
RsaI GTAC 3 cut(s) 559, 1058, 1330
RsaNI GTAC 3 cut(s) 558, 1057, 1329
RseI CAYNNNNRTG 2 cut(s) 877, 1911
SapI GCTCTTC 1 cut(s) 127
SaqAI TTAA 5 cut(s) 110, 936, 1238, 1296, 1320
SatI GCNGC 7 cut(s) 370, 1244, 1278, 1392, 1395, 1999, 2295
Sau3AI GATC 8 cut(s) 330, 842, 852, 894, 1078, 1454, 1784, 2257
Sau96I GGNCC 4 cut(s) 297, 617, 647, 2047
SchI GAGTC 1 cut(s) 322
ScrFI CCNGG 5 cut(s) 645, 651, 859, 954, 2051
SduI GDGCHC 5 cut(s) 203, 944, 1192, 1206, 2062
SfcI CTRYAG 1 cut(s) 1159
SinI GGWCC 2 cut(s) 297, 617
SmiMI CAYNNNNRTG 2 cut(s) 877, 1911
SmlI CTYRAG 2 cut(s) 935, 1237
SmoI CTYRAG 2 cut(s) 935, 1237
SnaBI TACGTA 1 cut(s) 1060
SsiI CCGC 5 cut(s) 18, 404, 1277, 1658, 1998
SspMI CTAG 9 cut(s) 56, 446, 534, 869, 1715, 1892, 1937, 2117, 2381
StyD4I CCNGG 5 cut(s) 643, 649, 857, 952, 2049
StyI CCWWGG 2 cut(s) 1476, 1788
TaaI ACNGT 7 cut(s) 67, 1091, 1291, 1363, 1591, 1943, 2099
TaiI ACGT 1 cut(s) 1062
TaqI TCGA 6 cut(s) 316, 836, 1131, 1221, 2026, 2137
TauI GCSGC 2 cut(s) 1280, 2001
TfiI GAWTC 6 cut(s) 143, 1051, 1094, 1731, 2360, 2396
Tru1I TTAA 5 cut(s) 110, 936, 1238, 1296, 1320
Tru9I TTAA 5 cut(s) 110, 936, 1238, 1296, 1320
TseI GCWGC 5 cut(s) 369, 1243, 1391, 1394, 2294
TspDTI ATGAA 8 cut(s) 536, 729, 1290, 1411, 1629, 1724, 2201, 2250
TspGWI ACGGA 1 cut(s) 812
Vha464I CTTAAG 2 cut(s) 935, 1237
VpaK11BI GGWCC 2 cut(s) 297, 617
XapI RAATTY 8 cut(s) 32, 235, 415, 453, 1040, 1412, 1813, 2217
XbaI TCTAGA 2 cut(s) 1891, 2116
XceI RCATGY 2 cut(s) 183, 1020
XspI CTAG 9 cut(s) 56, 446, 534, 869, 1715, 1892, 1937, 2117, 2381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.