RLG00000024662

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000166
Physical Location & Seq
Forward (+)
38002466 .. 38004889
2424 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024662

Sequence Viewer

Length: 2424 bp
ATGGAAGTTCCCAAGTTTATTCTTCTTTTGCTATTTGCAGCAACCTTTGCTTGGAGTCGAGCACGGTTAGAAGGGCTGCCAAGCTTAAAGCAAGGGAACTCCTTGAAAGTTGAGGAAGAGAGCAACTTCTTGGTTTCACCAAATGGAACCTTTTCGAGCGGATTTTACAAAGTTGGCGCCAATGCCTCCTGTTATTCAATATGGTTCACAAATAGTGCTGACAAAACAGTTGTCTGGATGGCTAATCGAGATAAGCCTGTCAGCGAAAGACGCTCGAAGCTAACCCTCAATGGAAATGGCAACCTGGTCTTGACTGATGCACTAGGTTCAGTTGTGTGGTCAACCAACACAATCTCTACGAAAGTCATGGAACTTCAGCTTCGTGAAACAGGAAACTTGGTGCTGAGGAACCAAGACGACAGGGTCATCTGGCAGAGTTTTGATTCTCCAACGGATACACTTCTACCATCACAGCCACTCACCAAGAACACAACCTTGGTGTCCATGAGAAGCCAAGGTACATACTTATCTGGATTCTATAACTTCAAGTTCGATGATAACAGTATCTTGTTTCTCATCTACAATGGCCCTCTACTTTCTAGTGTTTATTGGCCCCAGATTGTTTCAACTGTTTTTGAAAGTGGTAGAAATCCTTACAACAGCTCTAGAGTGGCAATTTTAGATGTGGCTGGACAATTTATATCTAGTGACAATATGCAGTTCTATGCATCTGACTATGGGGTTGGTCCAAAGCGGCGTTTAACAATGGATTATGATGGCATCTTAAGATTGTACAGTCTTGATGAATCAGCCGGGAATTGGAAACTGTCATGGTTGCCTGATGGTGTCGATGCCTGCCTGGTTCAGGGCTTGTGTGGTGAATATGGTATTTGCACTTACAAACCACTACCTACTTGTACTTGCCCTTCAGGGTTTTCCCTAAACGATCCCTCAGACTGGTCCAAAGGCTGCTCACCTCCCTTCAATTTGACCCAAGATACAAGCAAGCTAGACTTCCTGGAGCTCCCTTACACAGATTACTATGGATATGACTTGGAAACCTATCAACTTGGAATTTCTTTTGAAGCATGCAGAAATTCATGCCTAGTGGATTCAAGATGCTTGGGATTCGGATATGCGCTGGACGGATTAGGACAATGTTACCCTAAGAGTCTTCTGCTTAATGGATACCGTATGTCAAATGTTAAGAGCATCTTGCATGTTAAGATTCCAAAAGATTTTCTGACCCCTGGTGCAGTCCAAAGCAAACTAGAAGCACATGATTTGAGTTGTTCCGCAGCTCAGTTTTTTGTAAGTAGTGATCTTGAAACAGAAAAGGGCAATGGAAATCAGTATATGAAATACCTTATCGGATTTGTGAGTTCCTTTGCAATAATTGAAGCAATCTGCATTGGTTTGGCGTGGTGGTATGTGTTCCGAAAACAAGCTCATGAGGAACTGGTGAACATGGGTTACATGACATTAGCCATAAATGCTGTAGGATTTAAACATTTCACCTATGCAGAACTAAAGAAAGCAACCAATGACTTCAAACAGGAGATAGGAAAAGGAGGGTTCGGAACAGTCTATAAAGGGGTTCTGGATGGTGAAAGATTTGTAGCTGTGAAGAGATTAGAAGGCATTCTGCAAGGAGATGCAGAATTTTGGGCAGAGGTGAGTGTCATAGGGAATATCAATCATATGAACTTGGTTAAACTATATGGTTTCTGTGCTGATAATAATCATAAGCTATTGGTGTATGAGTACCTGGAGAATGGATCCTTGGATAAACTCTTGTTCTCAGATGTTGAACTTGGATTGGAAAAGCGGTACAAGATTGCATTAGGCACCGCAAAGGGTTTGTCATATCTACATGAGGAGTGCCTTGAATGGGTACTCCACTGTGATGTAAAGCCTCAAAATATACTGTTAGACAACCATCTTGAACCCAAGGTGGCAGATTTTGGCATGTCCAAGTTGTTCAAAGACATTAATGATGAAGGCATTGGATTTTCTAGAGTTCGAGGCACCAGAGGTTATATGGCTCCAGAGTGGATGGTGAATCTGAAAATTGATGCAAAGGCAGATGTCTACAGCTATGGGATTGTTCTGTTGGAGCTACTGACTGGAAAGAGTGCTTCTATTCTGCTTTCAGCTTTTGCACAAGAGTACATTGAGCACAACCAACTGGTACGATGTGTGACTGAAAAGATCAGAGTCGAAGGGATTAAGGAAGTGATAGATCCTCGACTTCATCATGATTTCAACAAAAAGAAGCTCGAAAGATTGATGAAGGTTGCTCTTTTGTGTGTACAAGAAGATCGGAGTGCAAGACCTGCCATGAGTAAGGTGGTGGAGCTTCTACTTGAGTCAAGGGTAGATAATAAAGGAACTGAAGATCAGGGAATGAATACTACAGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

808

Amino Acids

90.46

Weight (kDa)

5.72

Isoelectric Point (pI)

34.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 164 1.4e-25 D-mannose binding lectin
S_locus_glycop PF00954 251 - 313 2.2e-08 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 517 - 788 1.6e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 518 - 785 1.2e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 422
Acc36I ACCTGC 1 cut(s) 2344
AccB1I GGYRCC 3 cut(s) 176, 1847, 2027
AccBSI CCGCTC 1 cut(s) 159
AccI GTMKAC 1 cut(s) 2091
AciI CCGC 5 cut(s) 159, 754, 1296, 1828, 1851
AclWI GGATC 4 cut(s) 941, 1773, 1786, 2237
AcsI RAATTY 3 cut(s) 1074, 1096, 1661
AcuI CTGAAG 3 cut(s) 359, 912, 2415
AcyI GRCGYC 1 cut(s) 177
AfaI GTAC 9 cut(s) 520, 794, 919, 1766, 1832, 1896, 2171, 2193, 2313
AfiI CCNNNNNNNGG 5 cut(s) 51, 819, 865, 957, 1891
AflII CTTAAG 1 cut(s) 784
AjnI CCWGG 5 cut(s) 303, 858, 1017, 1249, 1767
AjuI GAANNNNNNNTTGG 4 cut(s) 479, 511, 1766, 1798
Alw21I GWGCWC 3 cut(s) 64, 1026, 2181
AlwI GGATC 4 cut(s) 941, 1773, 1786, 2237
AoxI GGCC 2 cut(s) 586, 611
ApeKI GCWGC 4 cut(s) 38, 76, 969, 1298
ApoI RAATTY 3 cut(s) 1074, 1096, 1661
ArsI GACNNNNNNTTYG 4 cut(s) 216, 248, 1847, 1879
AseI ATTAAT 1 cut(s) 1992
Asp700I GAANNNNTTC 2 cut(s) 151, 1641
AspLEI GCGC 2 cut(s) 179, 1141
AspS9I GGNCC 4 cut(s) 587, 612, 746, 960
AsuC2I CCSGG 1 cut(s) 814
AsuHPI GGTGA 9 cut(s) 129, 472, 890, 966, 1474, 1507, 1619, 1687, 2071
AvaII GGWCC 2 cut(s) 746, 960
BamHI GGATCC 1 cut(s) 1778
BanI GGYRCC 3 cut(s) 176, 1847, 2027
BanII GRGCYC 1 cut(s) 1026
BarI GAAGNNNNNNTAC 4 cut(s) 502, 534, 910, 942
BbsI GAAGAC 1 cut(s) 1166
Bbv12I GWGCWC 3 cut(s) 64, 1026, 2181
BbvCI CCTCAGC 1 cut(s) 404
BbvI GCAGC 4 cut(s) 50, 63, 956, 1310
BccI CCATC 7 cut(s) 232, 475, 770, 836, 1598, 1947, 2050
BciT130I CCWGG 5 cut(s) 305, 860, 1019, 1251, 1769
BciVI GTATCC 2 cut(s) 448, 1181
BcnI CCSGG 1 cut(s) 814
BfaI CTAG 8 cut(s) 323, 600, 666, 705, 1010, 1106, 1271, 2016
BfmI CTRYAG 3 cut(s) 1497, 2092, 2415
BfoI RGCGCY 1 cut(s) 180
BfrI CTTAAG 1 cut(s) 784
BfuAI ACCTGC 1 cut(s) 2344
BfuI GTATCC 2 cut(s) 448, 1181
BisI GCNGC 5 cut(s) 39, 77, 755, 970, 1299
BlsI GCNGC 5 cut(s) 40, 78, 756, 971, 1300
Bme1390I CCNGG 6 cut(s) 305, 814, 860, 1019, 1251, 1769
Bme18I GGWCC 2 cut(s) 746, 960
BmgT120I GGNCC 4 cut(s) 587, 612, 746, 960
BmiI GGNNCC 8 cut(s) 148, 178, 410, 614, 1780, 1849, 2029, 2046
BmrFI CCNGG 6 cut(s) 305, 814, 860, 1019, 1251, 1769
BmsI GCATC 8 cut(s) 307, 737, 789, 841, 1109, 1221, 1645, 2065
BpiI GAAGAC 1 cut(s) 1166
BpmI CTGGAG 3 cut(s) 1040, 1790, 2031
Bpu10I CCTNAGC 1 cut(s) 404
BpuEI CTTGAG 1 cut(s) 2387
BpuMI CCSGG 1 cut(s) 814
BsaBI GATNNNNATC 1 cut(s) 1740
BsaHI GRCGYC 1 cut(s) 177
BsaJI CCNNGG 5 cut(s) 495, 514, 1249, 1782, 1950
Bsc4I CCNNNNNNNGG 5 cut(s) 51, 819, 865, 957, 1891
Bse1I ACTGG 4 cut(s) 962, 1464, 2131, 2193
Bse3DI GCAATG 1 cut(s) 1348
Bse8I GATNNNNATC 1 cut(s) 1740
BseBI CCWGG 5 cut(s) 305, 860, 1019, 1251, 1769
BseDI CCNNGG 5 cut(s) 495, 514, 1249, 1782, 1950
BseGI GGATG 3 cut(s) 243, 1609, 2061
BseJI GATNNNNATC 1 cut(s) 1740
BseLI CCNNNNNNNGG 5 cut(s) 51, 819, 865, 957, 1891
BseMI GCAATG 1 cut(s) 1348
BseMII CTCAG 4 cut(s) 395, 966, 1316, 1815
BseNI ACTGG 4 cut(s) 962, 1464, 2131, 2193
BseRI GAGGAG 1 cut(s) 1892
BseXI GCAGC 4 cut(s) 50, 63, 956, 1310
BsgI GTGCAG 1 cut(s) 1275
BshFI GGCC 2 cut(s) 588, 613
BshNI GGYRCC 3 cut(s) 176, 1847, 2027
BsiHKAI GWGCWC 3 cut(s) 64, 1026, 2181
BsiSI CCGG 1 cut(s) 813
BslI CCNNNNNNNGG 5 cut(s) 51, 819, 865, 957, 1891
BsmI GAATGC 1 cut(s) 1641
BsnI GGCC 2 cut(s) 588, 613
Bsp1286I GDGCHC 3 cut(s) 64, 1026, 2181
Bsp1407I TGTACA 2 cut(s) 792, 2311
Bsp143I GATC 7 cut(s) 946, 1321, 1778, 2211, 2242, 2320, 2398
BspACI CCGC 5 cut(s) 159, 754, 1296, 1828, 1851
BspANI GGCC 2 cut(s) 588, 613
BspCNI CTCAG 4 cut(s) 396, 965, 1315, 1814
BspHI TCATGA 2 cut(s) 1450, 2257
BspLI GGNNCC 8 cut(s) 148, 178, 410, 614, 1780, 1849, 2029, 2046
BspMI ACCTGC 1 cut(s) 2344
BspPI GGATC 4 cut(s) 941, 1773, 1786, 2237
BspT107I GGYRCC 3 cut(s) 176, 1847, 2027
BspTI CTTAAG 1 cut(s) 784
BsrBI CCGCTC 1 cut(s) 159
BsrDI GCAATG 1 cut(s) 1348
BsrGI TGTACA 2 cut(s) 792, 2311
BsrI ACTGG 4 cut(s) 962, 1464, 2131, 2193
BssECI CCNNGG 5 cut(s) 495, 514, 1249, 1782, 1950
BssMI GATC 7 cut(s) 946, 1321, 1778, 2211, 2242, 2320, 2398
BssNI GRCGYC 1 cut(s) 177
BssT1I CCWWGG 4 cut(s) 495, 514, 1782, 1950
Bst2UI CCWGG 5 cut(s) 305, 860, 1019, 1251, 1769
Bst6I CTCTTC 2 cut(s) 111, 1622
BstACI GRCGYC 1 cut(s) 177
BstAFI CTTAAG 1 cut(s) 784
BstAPI GCANNNNNTGC 2 cut(s) 47, 2336
BstAUI TGTACA 2 cut(s) 792, 2311
BstC8I GCNNGC 3 cut(s) 856, 1007, 1090
BstDEI CTNAG 5 cut(s) 404, 952, 1167, 1302, 1801
BstENI CCTNNNNNAGG 1 cut(s) 863
BstF5I GGATG 3 cut(s) 243, 1609, 2061
BstH2I RGCGCY 1 cut(s) 180
BstHHI GCGC 2 cut(s) 179, 1141
BstKTI GATC 7 cut(s) 949, 1324, 1781, 2214, 2245, 2323, 2401
BstMBI GATC 7 cut(s) 946, 1321, 1778, 2211, 2242, 2320, 2398
BstMWI GCNNNNNNNGC 4 cut(s) 47, 270, 1493, 2336
BstNI CCWGG 5 cut(s) 305, 860, 1019, 1251, 1769
BstNSI RCATGY 3 cut(s) 1092, 1223, 1972
BstSCI CCNGG 6 cut(s) 303, 812, 858, 1017, 1249, 1767
BstSFI CTRYAG 3 cut(s) 1497, 2092, 2415
BstV1I GCAGC 4 cut(s) 50, 63, 956, 1310
BstV2I GAAGAC 1 cut(s) 1166
BstX2I RGATCY 2 cut(s) 1778, 2242
BstYI RGATCY 2 cut(s) 1778, 2242
BsuI GTATCC 2 cut(s) 448, 1181
BsuRI GGCC 2 cut(s) 588, 613
BtsCI GGATG 3 cut(s) 243, 1609, 2061
BtsIMutI CAGTG 1 cut(s) 1900
BveI ACCTGC 1 cut(s) 2344
Cac8I GCNNGC 3 cut(s) 856, 1007, 1090
CciI TCATGA 2 cut(s) 1450, 2257
CfoI GCGC 2 cut(s) 179, 1141
Cfr13I GGNCC 4 cut(s) 587, 612, 746, 960
CseI GACGC 1 cut(s) 279
CsiI ACCWGGT 1 cut(s) 303
Csp6I GTAC 9 cut(s) 519, 793, 918, 1765, 1831, 1895, 2170, 2192, 2312
CviQI GTAC 9 cut(s) 519, 793, 918, 1765, 1831, 1895, 2170, 2192, 2312
DdeI CTNAG 5 cut(s) 404, 952, 1167, 1302, 1801
DinI GGCGCC 1 cut(s) 178
DpnI GATC 7 cut(s) 948, 1323, 1780, 2213, 2244, 2322, 2400
DpnII GATC 7 cut(s) 946, 1321, 1778, 2211, 2242, 2320, 2398
DraI TTTAAA 1 cut(s) 1507
DrdI GACNNNNNNGTC 1 cut(s) 422
DseDI GACNNNNNNGTC 1 cut(s) 422
Eam1104I CTCTTC 2 cut(s) 111, 1622
EarI CTCTTC 2 cut(s) 111, 1622
Ecl136II GAGCTC 1 cut(s) 1024
Eco130I CCWWGG 4 cut(s) 495, 514, 1782, 1950
Eco24I GRGCYC 1 cut(s) 1026
Eco47I GGWCC 2 cut(s) 746, 960
Eco53kI GAGCTC 1 cut(s) 1024
Eco57I CTGAAG 3 cut(s) 359, 912, 2415
EcoICRI GAGCTC 1 cut(s) 1024
EcoNI CCTNNNNNAGG 1 cut(s) 863
EcoRII CCWGG 5 cut(s) 303, 858, 1017, 1249, 1767
EcoT14I CCWWGG 4 cut(s) 495, 514, 1782, 1950
EcoT22I ATGCAT 1 cut(s) 730
EcoT38I GRGCYC 1 cut(s) 1026
EgeI GGCGCC 1 cut(s) 178
EheI GGCGCC 1 cut(s) 178
ErhI CCWWGG 4 cut(s) 495, 514, 1782, 1950
FalI AAGNNNNNCTT 4 cut(s) 998, 1030, 1199, 1231
FauNDI CATATG 1 cut(s) 1701
FblI GTMKAC 1 cut(s) 2091
Fnu4HI GCNGC 5 cut(s) 39, 77, 755, 970, 1299
FokI GGATG 3 cut(s) 250, 1616, 2068
FriOI GRGCYC 1 cut(s) 1026
Fsp4HI GCNGC 5 cut(s) 39, 77, 755, 970, 1299
FspBI CTAG 8 cut(s) 323, 600, 666, 705, 1010, 1106, 1271, 2016
GlaI GCGC 2 cut(s) 178, 1140
GluI GCNGC 5 cut(s) 39, 77, 755, 970, 1299
GsuI CTGGAG 3 cut(s) 1040, 1790, 2031
HaeII RGCGCY 1 cut(s) 180
HaeIII GGCC 2 cut(s) 588, 613
HapII CCGG 1 cut(s) 813
HgaI GACGC 1 cut(s) 279
HhaI GCGC 2 cut(s) 179, 1141
Hin1I GRCGYC 1 cut(s) 177
Hin6I GCGC 2 cut(s) 177, 1139
HinP1I GCGC 2 cut(s) 177, 1139
HincII GTYRAC 1 cut(s) 342
HindII GTYRAC 1 cut(s) 342
HindIII AAGCTT 1 cut(s) 82
HpaII CCGG 1 cut(s) 813
HphI GGTGA 9 cut(s) 129, 472, 890, 966, 1474, 1507, 1619, 1687, 2071
Hpy166II GTNNAC 5 cut(s) 207, 342, 1465, 2092, 2312
Hpy8I GTNNAC 5 cut(s) 207, 342, 1465, 2092, 2312
HpyAV CCTTC 7 cut(s) 65, 936, 991, 1631, 1994, 2216, 2287
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 270, 1493, 2336
HpyF3I CTNAG 5 cut(s) 404, 952, 1167, 1302, 1801
Hsp92I GRCGYC 1 cut(s) 177
HspAI GCGC 2 cut(s) 177, 1139
KasI GGCGCC 1 cut(s) 176
Kzo9I GATC 7 cut(s) 946, 1321, 1778, 2211, 2242, 2320, 2398
LmnI GCTCC 5 cut(s) 1021, 1029, 2050, 2116, 2356
Lsp1109I GCAGC 4 cut(s) 50, 63, 956, 1310
LweI GCATC 8 cut(s) 307, 737, 789, 841, 1109, 1221, 1645, 2065
MabI ACCWGGT 1 cut(s) 303
MaeI CTAG 8 cut(s) 323, 600, 666, 705, 1010, 1106, 1271, 2016
MaeIII GTNAC 4 cut(s) 707, 1160, 1472, 2200
MalI GATC 7 cut(s) 948, 1323, 1780, 2213, 2244, 2322, 2400
MbiI CCGCTC 1 cut(s) 159
MboI GATC 7 cut(s) 946, 1321, 1778, 2211, 2242, 2320, 2398
MboII GAAGA 6 cut(s) 14, 128, 1166, 1639, 2330, 2408
MflI RGATCY 2 cut(s) 1778, 2242
MhlI GDGCHC 3 cut(s) 64, 1026, 2181
MluCI AATT 9 cut(s) 675, 695, 817, 985, 1074, 1096, 1395, 1661, 2070
Mly113I GGCGCC 1 cut(s) 177
MlyI GAGTC 4 cut(s) 64, 1180, 2226, 2378
MmeI TCCRAC 2 cut(s) 473, 2094
Mph1103I ATGCAT 1 cut(s) 730
MroXI GAANNNNTTC 2 cut(s) 151, 1641
MslI CAYNNNNRTG 1 cut(s) 1905
MspCI CTTAAG 1 cut(s) 784
MspI CCGG 1 cut(s) 813
MspR9I CCNGG 6 cut(s) 305, 814, 860, 1019, 1251, 1769
Mva1269I GAATGC 1 cut(s) 1641
MvaI CCWGG 5 cut(s) 305, 860, 1019, 1251, 1769
MwoI GCNNNNNNNGC 4 cut(s) 47, 270, 1493, 2336
NarI GGCGCC 1 cut(s) 177
NciI CCSGG 1 cut(s) 814
NdeI CATATG 1 cut(s) 1701
NdeII GATC 7 cut(s) 946, 1321, 1778, 2211, 2242, 2320, 2398
NlaIV GGNNCC 8 cut(s) 148, 178, 410, 614, 1780, 1849, 2029, 2046
NmuCI GTSAC 2 cut(s) 707, 2200
NsiI ATGCAT 1 cut(s) 730
NspI RCATGY 3 cut(s) 1092, 1223, 1972
PaeI GCATGC 1 cut(s) 1092
PagI TCATGA 2 cut(s) 1450, 2257
PctI GAATGC 1 cut(s) 1641
PdmI GAANNNNTTC 2 cut(s) 151, 1641
PfeI GAWTC 7 cut(s) 443, 534, 806, 1112, 1128, 1228, 2062
PflFI GACNNNGTC 1 cut(s) 422
PfoI TCCNGGA 1 cut(s) 1017
PkrI GCNGC 5 cut(s) 40, 78, 756, 971, 1300
PleI GAGTC 4 cut(s) 63, 1179, 2225, 2377
PluTI GGCGCC 1 cut(s) 180
PpsI GAGTC 4 cut(s) 63, 1179, 2225, 2377
PshBI ATTAAT 1 cut(s) 1992
Psp124BI GAGCTC 1 cut(s) 1026
Psp6I CCWGG 5 cut(s) 303, 858, 1017, 1249, 1767
PspGI CCWGG 5 cut(s) 303, 858, 1017, 1249, 1767
PspN4I GGNNCC 8 cut(s) 148, 178, 410, 614, 1780, 1849, 2029, 2046
PspPI GGNCC 4 cut(s) 587, 612, 746, 960
PsrI GAACNNNNNNTAC 2 cut(s) 1457, 1489
PsuI RGATCY 2 cut(s) 1778, 2242
PsyI GACNNNGTC 1 cut(s) 422
RsaI GTAC 9 cut(s) 520, 794, 919, 1766, 1832, 1896, 2171, 2193, 2313
RsaNI GTAC 9 cut(s) 519, 793, 918, 1765, 1831, 1895, 2170, 2192, 2312
RseI CAYNNNNRTG 1 cut(s) 1905
SacI GAGCTC 1 cut(s) 1026
SatI GCNGC 5 cut(s) 39, 77, 755, 970, 1299
Sau3AI GATC 7 cut(s) 946, 1321, 1778, 2211, 2242, 2320, 2398
Sau96I GGNCC 4 cut(s) 587, 612, 746, 960
SchI GAGTC 4 cut(s) 64, 1180, 2226, 2378
ScrFI CCNGG 6 cut(s) 305, 814, 860, 1019, 1251, 1769
SduI GDGCHC 3 cut(s) 64, 1026, 2181
SexAI ACCWGGT 1 cut(s) 303
SfaNI GCATC 8 cut(s) 307, 737, 789, 841, 1109, 1221, 1645, 2065
SfcI CTRYAG 3 cut(s) 1497, 2092, 2415
SfoI GGCGCC 1 cut(s) 178
SinI GGWCC 2 cut(s) 746, 960
SmiMI CAYNNNNRTG 1 cut(s) 1905
SmlI CTYRAG 2 cut(s) 784, 2366
SmoI CTYRAG 2 cut(s) 784, 2366
SphI GCATGC 1 cut(s) 1092
Sse9I AATT 9 cut(s) 675, 695, 817, 985, 1074, 1096, 1395, 1661, 2070
SsiI CCGC 5 cut(s) 159, 754, 1296, 1828, 1851
SspDI GGCGCC 1 cut(s) 176
SspMI CTAG 8 cut(s) 323, 600, 666, 705, 1010, 1106, 1271, 2016
SstI GAGCTC 1 cut(s) 1026
StyD4I CCNGG 6 cut(s) 303, 812, 858, 1017, 1249, 1767
StyI CCWWGG 4 cut(s) 495, 514, 1782, 1950
TasI AATT 9 cut(s) 675, 695, 817, 985, 1074, 1096, 1395, 1661, 2070
TatI WGTACW 4 cut(s) 792, 917, 2169, 2311
TauI GCSGC 1 cut(s) 757
TfiI GAWTC 7 cut(s) 443, 534, 806, 1112, 1128, 1228, 2062
TscAI CASTG 1 cut(s) 1907
TseFI GTSAC 2 cut(s) 707, 2200
TseI GCWGC 4 cut(s) 38, 76, 969, 1298
Tsp45I GTSAC 2 cut(s) 707, 2200
TspDTI ATGAA 8 cut(s) 819, 1089, 1373, 1718, 2013, 2243, 2306, 2423
TspGWI ACGGA 2 cut(s) 467, 1161
TspRI CASTG 1 cut(s) 1907
Tth111I GACNNNGTC 1 cut(s) 422
Vha464I CTTAAG 1 cut(s) 784
VpaK11BI GGWCC 2 cut(s) 746, 960
VspI ATTAAT 1 cut(s) 1992
XagI CCTNNNNNAGG 1 cut(s) 863
XapI RAATTY 3 cut(s) 1074, 1096, 1661
XbaI TCTAGA 2 cut(s) 665, 2015
XceI RCATGY 3 cut(s) 1092, 1223, 1972
XcmI CCANNNNNNNNNTGG 2 cut(s) 2038, 2347
XmiI GTMKAC 1 cut(s) 2091
XmnI GAANNNNTTC 2 cut(s) 151, 1641
XspI CTAG 8 cut(s) 323, 600, 666, 705, 1010, 1106, 1271, 2016
Zsp2I ATGCAT 1 cut(s) 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.