RchiOBHm_Chr6g0308531

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000166
Physical Location & Seq
Forward (+)
66600868 .. 66602636
1769 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27743

Sequence Viewer

Length: 1767 bp
ATGGATCCTCTGTTTCTCATTCTACTTCTCTTTCTGGCCATCACTTCTCCAACTTCATCTTCAACCTCCGACGCATTGAGTGAAGGCTCATCCCTCTCTGTAGAGAAACCAGAAGATGTTCTGATTTCACCTGCTGGTCTTTTCACTGCCGGCTTTCATCAAGTTGGCAACAACTCGTATTGCTTTGCCATTTGGTTCAATGAGCCATCATCATCGTCATCACCAGTCTCCTACCAGAACCGAACTATAGTCTGGATGGCAAATCGTGACCAACCAGTCAACGGGAAGCGCTCAAAGCTCTCCCTCCTCAAAACTGGTAATCTCATCTTAACTGATGCTGCTCAATCCCATGTTTGGACTACAACAACCACCTCAATCTCCCCTGCCCGTTTACGCCTCTACGACTCCGGTAATCTGGTTCTGCTTAATCTGAAGACGAAGGTTGTTCTATGGCAGAGCTTTGACTCCCCAACTGACACCCTTCTTCCACTCCAACCATTCACCAGAACCGCCATACTTGTCTCCTCCAGAAGCCAGAGCAACTTCTCCTCTGGCTTCTATAAGCTCTTCTTCGACAATGATAACCTTCTCCGGCTACTCTTTGACGGCCCTGAGATTTCTAGTGTCTACTGGCCCAACCCTGCATATGTGAGCTGGGATAATGCAAGGTCTACTTACAACAGCAGTAGAACTGCTGTGCTTGATTCCTTGGGCAGTTTTGCTTCTTCGGACAATCTGACTTTTCTTGCAGTTGATTATGGTGCAAAGTTGCAGAGAAGATTGACTATTGATTTTGATGGAAATGTTCGATTGTATAGCCGGAAAATGCCAGGAGAGAGTTGGGTGGTTTCATGGCAAGCCTTTTCAGACCCTTGTGTGATTCATGGAATTTGTGGAGCTAACAGCCTCTGCAGCTACGATCCCAGTTCTAGGAGGAAATGCTCTTGCCTTCCAGGATATCAGATGAAAAATCATACTGATTGGTCTTTGGGGTGTCAACCGGAGTTTCAATTCTCTTATGTAGAAGGTGAGTCTCGTTTTCTCCAACTTACGCAAGTTGAGTTCTATGGTTACGATTATAATGAGTACCAAAATTATAGCTATGGTGATTGTGAGAAAAGATGCTTGGAACTGGATAACTGCAAGGGCTTTCAGTACACGTTTGATTCTGGTGTTTATAAGTGTAATCCCAAGACGCAGTTGCGAAGTGGGCACAGGTGGAACACTCAAGGTTACTTCTATCTGAGACTGCCCAAGGCTCACCTCTTCTCTAACACAGACATAAAGCCCCCGAAGAACCTTGGTTTTAGTTGCACAGAAAAAGTTGTTGATCTCGAGAGGGAGTATGTTAAAGATCGAGTCAGTAAGCCGGTGAAATTCCTGCTCTGGTTTGCCTATGGAGTTGGGGGAGTTGAAATCATTTGTATCATTTTGGTTTGGGGTTTGTTGAGCAGTACATTCTCAAAATCAAATGAAGATATTCACGGCTACCTTCTTACTGCAACCGGGTTCAAAAGATTTAGCTACGCTGAGCTCAAGACTGCAACACGGGGTTTTAGTGATGAAATTGGGAGAGGAGCAGGAGGAGTTGTTTACAAAGGCGTATTGGCTGATCAGCGAGTGGCAGCGATTAAGCTGCTCAGTGAAGCTAATCAAGTAGAAGCAGAATTTCTAGCAGAAGCTAGTACTATTGGGAAGGTGAATCATATGAACTTGATAGAGATGTGGGGATATTGCTCAGAGGGAAAGCAGGCTTCTTGTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

588

Amino Acids

65.9

Weight (kDa)

7.04

Isoelectric Point (pI)

46.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 82 - 167 3.1e-24 D-mannose binding lectin
S_locus_glycop PF00954 254 - 323 1e-08 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 520 - 584 3.1e-07 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 521 - 584 1.6e-06 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1080, 1179
AarI CACCTGC 1 cut(s) 139
AasI GACNNNNNNGTC 1 cut(s) 275
Acc36I ACCTGC 1 cut(s) 139
AccI GTMKAC 2 cut(s) 627, 671
AciI CCGC 1 cut(s) 510
AclWI GGATC 2 cut(s) 12, 914
AcoI YGGCCR 1 cut(s) 36
AcsI RAATTY 3 cut(s) 888, 1376, 1667
AcuI CTGAAG 1 cut(s) 452
AfaI GTAC 4 cut(s) 1088, 1157, 1456, 1687
AfeI AGCGCT 1 cut(s) 290
AfiI CCNNNNNNNGG 3 cut(s) 281, 354, 930
AflIII ACRYGT 1 cut(s) 1158
AgsI TTSAA 5 cut(s) 63, 199, 1010, 1415, 1513
AjnI CCWGG 2 cut(s) 829, 952
AjuI GAANNNNNNNTTGG 4 cut(s) 43, 75, 1109, 1141
Alw21I GWGCWC 1 cut(s) 1536
Alw26I GTCTC 4 cut(s) 232, 526, 1038, 1240
AlwI GGATC 2 cut(s) 12, 914
AlwNI CAGNNNCTG 1 cut(s) 909
Ama87I CYCGRG 1 cut(s) 1334
Aor51HI AGCGCT 1 cut(s) 290
AoxI GGCC 3 cut(s) 36, 607, 632
ApeKI GCWGC 4 cut(s) 338, 912, 1625, 1636
ApoI RAATTY 3 cut(s) 888, 1376, 1667
Asp700I GAANNNNTTC 2 cut(s) 117, 1479
AspLEI GCGC 1 cut(s) 291
AspS9I GGNCC 2 cut(s) 608, 633
AsuC2I CCSGG 1 cut(s) 1507
AsuHPI GGTGA 8 cut(s) 120, 213, 493, 1040, 1118, 1253, 1384, 1711
AvaI CYCGRG 1 cut(s) 1334
BaeGI GKGCMC 1 cut(s) 1215
BalI TGGCCA 1 cut(s) 38
BamHI GGATCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 1536
BbsI GAAGAC 1 cut(s) 440
Bbv12I GWGCWC 1 cut(s) 1536
BbvI GCAGC 4 cut(s) 325, 924, 1623, 1637
BccI CCATC 4 cut(s) 47, 214, 250, 791
BceAI ACGGC 2 cut(s) 622, 1501
BcgI CGANNNNNNTGC 2 cut(s) 1618, 1652
BciT130I CCWGG 2 cut(s) 831, 954
BclI TGATCA 1 cut(s) 1612
BcnI CCSGG 1 cut(s) 1507
BcoDI GTCTC 4 cut(s) 232, 526, 1038, 1240
BfaI CTAG 4 cut(s) 621, 930, 1673, 1683
BfmI CTRYAG 3 cut(s) 99, 246, 910
BfoI RGCGCY 1 cut(s) 292
BfuAI ACCTGC 1 cut(s) 139
BisI GCNGC 4 cut(s) 339, 913, 1626, 1637
BlpI GCTNAGC 1 cut(s) 1530
BlsI GCNGC 4 cut(s) 340, 914, 1627, 1638
BmcAI AGTACT 1 cut(s) 1687
Bme1390I CCNGG 3 cut(s) 831, 954, 1507
BmeT110I CYCGRG 1 cut(s) 1334
BmgT120I GGNCC 2 cut(s) 608, 633
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 3 cut(s) 831, 954, 1507
BmrI ACTGGG 1 cut(s) 918
BmsI GCATC 2 cut(s) 325, 1112
BmuI ACTGGG 1 cut(s) 918
BpiI GAAGAC 1 cut(s) 440
BpmI CTGGAG 1 cut(s) 511
Bpu1102I GCTNAGC 1 cut(s) 1530
BpuEI CTTGAG 2 cut(s) 1212, 1520
BpuMI CCSGG 1 cut(s) 1507
BsaJI CCNNGG 3 cut(s) 708, 1254, 1300
BsaWI WCCGGW 2 cut(s) 407, 1000
BsaXI ACNNNNNCTCC 2 cut(s) 1575, 1605
Bsc4I CCNNNNNNNGG 3 cut(s) 281, 354, 930
Bse118I RCCGGY 2 cut(s) 149, 1369
Bse1I ACTGG 6 cut(s) 224, 275, 319, 635, 924, 1137
BseBI CCWGG 2 cut(s) 831, 954
BseDI CCNNGG 3 cut(s) 708, 1254, 1300
BseGI GGATG 2 cut(s) 89, 261
BseLI CCNNNNNNNGG 3 cut(s) 281, 354, 930
BseMII CTCAG 5 cut(s) 603, 1235, 1521, 1654, 1752
BseNI ACTGG 6 cut(s) 224, 275, 319, 635, 924, 1137
BseRI GAGGAG 5 cut(s) 296, 514, 538, 1590, 1599
BseSI GKGCMC 1 cut(s) 1215
BseXI GCAGC 4 cut(s) 325, 924, 1623, 1637
BseYI CCCAGC 1 cut(s) 654
BshFI GGCC 3 cut(s) 38, 609, 634
BsiHKAI GWGCWC 1 cut(s) 1536
BsiHKCI CYCGRG 1 cut(s) 1334
BsiSI CCGG 7 cut(s) 150, 408, 592, 820, 1001, 1370, 1506
BslI CCNNNNNNNGG 3 cut(s) 281, 354, 930
BsmAI GTCTC 4 cut(s) 232, 526, 1038, 1240
BsnI GGCC 3 cut(s) 38, 609, 634
BsoBI CYCGRG 1 cut(s) 1334
Bsp1286I GDGCHC 2 cut(s) 1215, 1536
Bsp143I GATC 5 cut(s) 4, 919, 1330, 1354, 1612
Bsp1720I GCTNAGC 1 cut(s) 1530
BspACI CCGC 1 cut(s) 510
BspANI GGCC 3 cut(s) 38, 609, 634
BspCNI CTCAG 5 cut(s) 604, 1236, 1522, 1653, 1751
BspLI GGNNCC 1 cut(s) 6
BspMAI CTGCAG 1 cut(s) 914
BspMI ACCTGC 1 cut(s) 139
BspPI GGATC 2 cut(s) 12, 914
BspQI GCTCTTC 1 cut(s) 572
BsrFI RCCGGY 2 cut(s) 149, 1369
BsrI ACTGG 6 cut(s) 224, 275, 319, 635, 924, 1137
BssAI RCCGGY 2 cut(s) 149, 1369
BssECI CCNNGG 3 cut(s) 708, 1254, 1300
BssMI GATC 5 cut(s) 4, 919, 1330, 1354, 1612
BssT1I CCWWGG 3 cut(s) 708, 1254, 1300
Bst2UI CCWGG 2 cut(s) 831, 954
Bst6I CTCTTC 2 cut(s) 572, 1271
BstC8I GCNNGC 3 cut(s) 151, 858, 1752
BstDEI CTNAG 5 cut(s) 612, 1244, 1530, 1640, 1738
BstF5I GGATG 2 cut(s) 89, 261
BstH2I RGCGCY 1 cut(s) 292
BstHHI GCGC 1 cut(s) 291
BstKTI GATC 5 cut(s) 7, 922, 1333, 1357, 1615
BstMAI GTCTC 4 cut(s) 232, 526, 1038, 1240
BstMBI GATC 5 cut(s) 4, 919, 1330, 1354, 1612
BstMWI GCNNNNNNNGC 3 cut(s) 295, 912, 1210
BstNI CCWGG 2 cut(s) 831, 954
BstSCI CCNGG 3 cut(s) 829, 952, 1505
BstSFI CTRYAG 3 cut(s) 99, 246, 910
BstSLI GKGCMC 1 cut(s) 1215
BstV1I GCAGC 4 cut(s) 325, 924, 1623, 1637
BstV2I GAAGAC 1 cut(s) 440
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
BsuRI GGCC 3 cut(s) 38, 609, 634
BtsCI GGATG 2 cut(s) 89, 261
BtsI GCAGTG 1 cut(s) 144
BtsIMutI CAGTG 2 cut(s) 144, 1648
BveI ACCTGC 1 cut(s) 139
Cac8I GCNNGC 3 cut(s) 151, 858, 1752
CaiI CAGNNNCTG 1 cut(s) 909
CfoI GCGC 1 cut(s) 291
Cfr10I RCCGGY 2 cut(s) 149, 1369
Cfr13I GGNCC 2 cut(s) 608, 633
CseI GACGC 2 cut(s) 80, 1204
Csp6I GTAC 4 cut(s) 1087, 1156, 1455, 1686
CviAII CATG 3 cut(s) 350, 852, 884
CviQI GTAC 4 cut(s) 1087, 1156, 1455, 1686
DdeI CTNAG 5 cut(s) 612, 1244, 1530, 1640, 1738
DpnI GATC 5 cut(s) 6, 921, 1332, 1356, 1614
DpnII GATC 5 cut(s) 4, 919, 1330, 1354, 1612
DrdI GACNNNNNNGTC 1 cut(s) 275
DseDI GACNNNNNNGTC 1 cut(s) 275
EaeI YGGCCR 1 cut(s) 36
Eam1104I CTCTTC 2 cut(s) 572, 1271
EarI CTCTTC 2 cut(s) 572, 1271
Ecl136II GAGCTC 1 cut(s) 1534
Eco130I CCWWGG 3 cut(s) 708, 1254, 1300
Eco24I GRGCYC 1 cut(s) 1536
Eco32I GATATC 1 cut(s) 959
Eco47III AGCGCT 1 cut(s) 290
Eco53kI GAGCTC 1 cut(s) 1534
Eco57I CTGAAG 1 cut(s) 452
Eco88I CYCGRG 1 cut(s) 1334
EcoICRI GAGCTC 1 cut(s) 1534
EcoRII CCWGG 2 cut(s) 829, 952
EcoRV GATATC 1 cut(s) 959
EcoT14I CCWWGG 3 cut(s) 708, 1254, 1300
EcoT38I GRGCYC 1 cut(s) 1536
ErhI CCWWGG 3 cut(s) 708, 1254, 1300
FaeI CATG 3 cut(s) 353, 855, 887
FalI AAGNNNNNCTT 4 cut(s) 554, 586, 658, 690
FatI CATG 3 cut(s) 349, 851, 883
FauNDI CATATG 2 cut(s) 646, 1707
FbaI TGATCA 1 cut(s) 1612
FblI GTMKAC 2 cut(s) 627, 671
Fnu4HI GCNGC 4 cut(s) 339, 913, 1626, 1637
FokI GGATG 2 cut(s) 76, 268
FriOI GRGCYC 1 cut(s) 1536
Fsp4HI GCNGC 4 cut(s) 339, 913, 1626, 1637
FspBI CTAG 4 cut(s) 621, 930, 1673, 1683
GlaI GCGC 1 cut(s) 290
GluI GCNGC 4 cut(s) 339, 913, 1626, 1637
GsaI CCCAGC 1 cut(s) 658
GsuI CTGGAG 1 cut(s) 511
HaeII RGCGCY 1 cut(s) 292
HaeIII GGCC 3 cut(s) 38, 609, 634
HapII CCGG 7 cut(s) 150, 408, 592, 820, 1001, 1370, 1506
HgaI GACGC 2 cut(s) 80, 1204
HhaI GCGC 1 cut(s) 291
Hin1II CATG 3 cut(s) 353, 855, 887
Hin6I GCGC 1 cut(s) 289
HinP1I GCGC 1 cut(s) 289
HincII GTYRAC 2 cut(s) 280, 998
HindII GTYRAC 2 cut(s) 280, 998
HinfI GANTC 8 cut(s) 404, 464, 704, 880, 1031, 1166, 1359, 1702
HpaII CCGG 7 cut(s) 150, 408, 592, 820, 1001, 1370, 1506
HphI GGTGA 8 cut(s) 120, 213, 493, 1040, 1118, 1253, 1384, 1711
Hpy166II GTNNAC 7 cut(s) 280, 392, 628, 672, 998, 1158, 1594
Hpy188I TCNGA 9 cut(s) 70, 123, 432, 730, 738, 868, 963, 1245, 1741
Hpy188III TCNNGA 6 cut(s) 253, 266, 528, 1334, 1336, 1537
Hpy8I GTNNAC 7 cut(s) 280, 392, 628, 672, 998, 1158, 1594
Hpy99I CGWCG 1 cut(s) 74
HpyAV CCTTC 8 cut(s) 77, 433, 491, 596, 959, 1019, 1502, 1690
HpyCH4IV ACGT 1 cut(s) 1160
HpyF10VI GCNNNNNNNGC 3 cut(s) 295, 912, 1210
HpyF3I CTNAG 5 cut(s) 612, 1244, 1530, 1640, 1738
HpySE526I ACGT 1 cut(s) 1160
Hsp92II CATG 3 cut(s) 353, 855, 887
HspAI GCGC 1 cut(s) 289
KroI GCCGGC 1 cut(s) 149
KroNI GCCGGC 1 cut(s) 151
Ksp22I TGATCA 1 cut(s) 1612
Kzo9I GATC 5 cut(s) 4, 919, 1330, 1354, 1612
LguI GCTCTTC 1 cut(s) 572
LmnI GCTCC 2 cut(s) 896, 1577
Lsp1109I GCAGC 4 cut(s) 325, 924, 1623, 1637
LweI GCATC 2 cut(s) 325, 1112
MaeI CTAG 4 cut(s) 621, 930, 1673, 1683
MaeII ACGT 1 cut(s) 1160
MaeIII GTNAC 3 cut(s) 266, 1070, 1232
MalI GATC 5 cut(s) 6, 921, 1332, 1356, 1614
MboI GATC 5 cut(s) 4, 919, 1330, 1354, 1612
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 2 cut(s) 1215, 1536
MlsI TGGCCA 1 cut(s) 38
MluCI AATT 6 cut(s) 888, 1010, 1093, 1376, 1566, 1667
MluNI TGGCCA 1 cut(s) 38
MlyI GAGTC 4 cut(s) 398, 458, 1040, 1368
MmeI TCCRAC 4 cut(s) 74, 93, 517, 1069
Mox20I TGGCCA 1 cut(s) 38
MroNI GCCGGC 1 cut(s) 149
MroXI GAANNNNTTC 2 cut(s) 117, 1479
MscI TGGCCA 1 cut(s) 38
MseI TTAA 4 cut(s) 329, 426, 1350, 1632
Msp20I TGGCCA 1 cut(s) 38
MspI CCGG 7 cut(s) 150, 408, 592, 820, 1001, 1370, 1506
MspR9I CCNGG 3 cut(s) 831, 954, 1507
MvaI CCWGG 2 cut(s) 831, 954
MwoI GCNNNNNNNGC 3 cut(s) 295, 912, 1210
NaeI GCCGGC 1 cut(s) 151
NciI CCSGG 1 cut(s) 1507
NdeI CATATG 2 cut(s) 646, 1707
NdeII GATC 5 cut(s) 4, 919, 1330, 1354, 1612
NgoMIV GCCGGC 1 cut(s) 149
NlaIII CATG 3 cut(s) 353, 855, 887
NlaIV GGNNCC 1 cut(s) 6
NmuCI GTSAC 1 cut(s) 266
PaeR7I CTCGAG 1 cut(s) 1334
PaqCI CACCTGC 1 cut(s) 139
PciSI GCTCTTC 1 cut(s) 572
PdiI GCCGGC 1 cut(s) 151
PdmI GAANNNNTTC 2 cut(s) 117, 1479
PfeI GAWTC 4 cut(s) 704, 880, 1166, 1702
PfoI TCCNGGA 1 cut(s) 952
PkrI GCNGC 4 cut(s) 340, 914, 1627, 1638
PleI GAGTC 4 cut(s) 398, 458, 1039, 1367
PpsI GAGTC 4 cut(s) 398, 458, 1039, 1367
PsiI TTATAA 2 cut(s) 1080, 1179
Psp124BI GAGCTC 1 cut(s) 1536
Psp6I CCWGG 2 cut(s) 829, 952
PspFI CCCAGC 1 cut(s) 654
PspGI CCWGG 2 cut(s) 829, 952
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 2 cut(s) 608, 633
PstI CTGCAG 1 cut(s) 914
PstNI CAGNNNCTG 1 cut(s) 909
PsuI RGATCY 1 cut(s) 4
RsaI GTAC 4 cut(s) 1088, 1157, 1456, 1687
RsaNI GTAC 4 cut(s) 1087, 1156, 1455, 1686
SacI GAGCTC 1 cut(s) 1536
SapI GCTCTTC 1 cut(s) 572
SaqAI TTAA 4 cut(s) 329, 426, 1350, 1632
SatI GCNGC 4 cut(s) 339, 913, 1626, 1637
Sau3AI GATC 5 cut(s) 4, 919, 1330, 1354, 1612
Sau96I GGNCC 2 cut(s) 608, 633
ScaI AGTACT 1 cut(s) 1687
SchI GAGTC 4 cut(s) 398, 458, 1040, 1368
ScrFI CCNGG 3 cut(s) 831, 954, 1507
SduI GDGCHC 2 cut(s) 1215, 1536
SfaNI GCATC 2 cut(s) 325, 1112
SfcI CTRYAG 3 cut(s) 99, 246, 910
Sfr274I CTCGAG 1 cut(s) 1334
SlaI CTCGAG 1 cut(s) 1334
SmlI CTYRAG 3 cut(s) 1227, 1334, 1535
SmoI CTYRAG 3 cut(s) 1227, 1334, 1535
Sse9I AATT 6 cut(s) 888, 1010, 1093, 1376, 1566, 1667
SsiI CCGC 1 cut(s) 510
SspMI CTAG 4 cut(s) 621, 930, 1673, 1683
SstI GAGCTC 1 cut(s) 1536
StyD4I CCNGG 3 cut(s) 829, 952, 1505
StyI CCWWGG 3 cut(s) 708, 1254, 1300
TaiI ACGT 1 cut(s) 1163
TaqI TCGA 4 cut(s) 573, 808, 1335, 1357
TasI AATT 6 cut(s) 888, 1010, 1093, 1376, 1566, 1667
TatI WGTACW 3 cut(s) 1155, 1454, 1685
TfiI GAWTC 4 cut(s) 704, 880, 1166, 1702
Tru1I TTAA 4 cut(s) 329, 426, 1350, 1632
Tru9I TTAA 4 cut(s) 329, 426, 1350, 1632
TscAI CASTG 2 cut(s) 151, 1648
TseFI GTSAC 1 cut(s) 266
TseI GCWGC 4 cut(s) 338, 912, 1625, 1636
Tsp45I GTSAC 1 cut(s) 266
TspDTI ATGAA 8 cut(s) 45, 146, 840, 872, 980, 1488, 1578, 1724
TspRI CASTG 2 cut(s) 151, 1648
XapI RAATTY 3 cut(s) 888, 1376, 1667
XcmI CCANNNNNNNNNTGG 1 cut(s) 837
XhoI CTCGAG 1 cut(s) 1334
XmiI GTMKAC 2 cut(s) 627, 671
XmnI GAANNNNTTC 2 cut(s) 117, 1479
XspI CTAG 4 cut(s) 621, 930, 1673, 1683
ZrmI AGTACT 1 cut(s) 1687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.