RLG00000010634

Receptor protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
3168230 .. 3168780
551 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010634

Sequence Viewer

Length: 426 bp
ATGAAGATATTCACGGCTACCTTCTTACTGCAACCGGGTTCAAAAGATTTAGCTACGTTGAGCTCAAGACTGCAACGCGGGGTTTTAGTGAAGAAATTGGGAGAGAAGCAGGAGGAGTTGTGTACAAAGGCATATTGGCTGATCAAGGGAAAGCCCAGGCTTCTTGTTTATGAGTACATGGAGCATGGTTCCTTGGCACAGAAGTTAGCTTCCCATGAGCTTGATTGGGAGATGAGGTTTGAGATTGCTGTCGGCACTGCAAAGGGTCTAACTTATTTGCACGAAGAGTGCTTGGAGTGGGTTCTACATTGTGATGTAAAGCCTCAAAACATACTGTTGGACTCCAATTTTCAACCAAAGGTTGCAGATTTCGGGCTCTCCAAGATTCTTAACAGAGATGAGCTCAGGAATTCAAGCTTTTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

142

Amino Acids

16.19

Weight (kDa)

7.72

Isoelectric Point (pI)

37.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 39 - 135 3.9e-18 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 39 - 134 2.9e-16 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 78
AciI CCGC 1 cut(s) 78
AcsI RAATTY 1 cut(s) 409
AfaI GTAC 2 cut(s) 124, 176
AgsI TTSAA 3 cut(s) 42, 353, 414
AjnI CCWGG 1 cut(s) 155
AluBI AGCT 6 cut(s) 53, 63, 209, 220, 403, 417
AluI AGCT 6 cut(s) 53, 63, 209, 220, 403, 417
Alw21I GWGCWC 2 cut(s) 65, 405
ApoI RAATTY 1 cut(s) 409
Asp700I GAANNNNTTC 1 cut(s) 8
AsuC2I CCSGG 1 cut(s) 36
BanII GRGCYC 3 cut(s) 65, 378, 405
Bbv12I GWGCWC 2 cut(s) 65, 405
BceAI ACGGC 1 cut(s) 30
BciT130I CCWGG 1 cut(s) 157
BclI TGATCA 1 cut(s) 141
BcnI CCSGG 1 cut(s) 36
Bme1390I CCNGG 2 cut(s) 36, 157
BmiI GGNNCC 1 cut(s) 190
BmrFI CCNGG 2 cut(s) 36, 157
BplI GAGNNNNNCTC 2 cut(s) 387, 419
Bpu10I CCTNAGC 1 cut(s) 404
BpuEI CTTGAG 1 cut(s) 49
BpuMI CCSGG 1 cut(s) 36
BsaJI CCNNGG 2 cut(s) 155, 192
BsaXI ACNNNNNCTCC 4 cut(s) 104, 134, 221, 251
BseBI CCWGG 1 cut(s) 157
BseDI CCNNGG 2 cut(s) 155, 192
BseMII CTCAG 1 cut(s) 418
BseRI GAGGAG 1 cut(s) 128
Bsh1236I CGCG 1 cut(s) 78
BsiHKAI GWGCWC 2 cut(s) 65, 405
BsiSI CCGG 1 cut(s) 35
Bsp1286I GDGCHC 3 cut(s) 65, 378, 405
Bsp1407I TGTACA 1 cut(s) 122
Bsp143I GATC 1 cut(s) 141
BspACI CCGC 1 cut(s) 78
BspCNI CTCAG 1 cut(s) 417
BspFNI CGCG 1 cut(s) 78
BspLI GGNNCC 1 cut(s) 190
BsrGI TGTACA 1 cut(s) 122
BssECI CCNNGG 2 cut(s) 155, 192
BssMI GATC 1 cut(s) 141
BssT1I CCWWGG 1 cut(s) 192
Bst2UI CCWGG 1 cut(s) 157
Bst4CI ACNGT 1 cut(s) 336
Bst6I CTCTTC 1 cut(s) 279
BstAUI TGTACA 1 cut(s) 122
BstDEI CTNAG 1 cut(s) 404
BstFNI CGCG 1 cut(s) 78
BstKTI GATC 1 cut(s) 144
BstMBI GATC 1 cut(s) 141
BstNI CCWGG 1 cut(s) 157
BstSCI CCNGG 2 cut(s) 34, 155
BstUI CGCG 1 cut(s) 78
BtsI GCAGTG 1 cut(s) 255
BtsIMutI CAGTG 1 cut(s) 255
Csp6I GTAC 2 cut(s) 123, 175
CviAII CATG 3 cut(s) 178, 185, 215
CviQI GTAC 2 cut(s) 123, 175
DdeI CTNAG 1 cut(s) 404
DpnI GATC 1 cut(s) 143
DpnII GATC 1 cut(s) 141
Eam1104I CTCTTC 1 cut(s) 279
EarI CTCTTC 1 cut(s) 279
Ecl136II GAGCTC 2 cut(s) 63, 403
Eco130I CCWWGG 1 cut(s) 192
Eco24I GRGCYC 3 cut(s) 65, 378, 405
Eco53kI GAGCTC 2 cut(s) 63, 403
EcoICRI GAGCTC 2 cut(s) 63, 403
EcoRI GAATTC 1 cut(s) 409
EcoRII CCWGG 1 cut(s) 155
EcoT14I CCWWGG 1 cut(s) 192
EcoT38I GRGCYC 3 cut(s) 65, 378, 405
ErhI CCWWGG 1 cut(s) 192
FaeI CATG 3 cut(s) 181, 188, 218
FaiI YATR 6 cut(s) 133, 171, 179, 186, 216, 332
FatI CATG 3 cut(s) 177, 184, 214
FauI CCCGC 1 cut(s) 71
FbaI TGATCA 1 cut(s) 141
FriOI GRGCYC 3 cut(s) 65, 378, 405
HapII CCGG 1 cut(s) 35
Hin1II CATG 3 cut(s) 181, 188, 218
HindIII AAGCTT 1 cut(s) 415
HinfI GANTC 2 cut(s) 341, 385
HpaII CCGG 1 cut(s) 35
Hpy166II GTNNAC 1 cut(s) 123
Hpy188III TCNNGA 3 cut(s) 66, 406, 423
Hpy8I GTNNAC 1 cut(s) 123
HpyAV CCTTC 1 cut(s) 31
HpyCH4III ACNGT 1 cut(s) 336
HpyCH4IV ACGT 1 cut(s) 56
HpyCH4V TGCA 5 cut(s) 31, 73, 260, 280, 365
HpyF3I CTNAG 1 cut(s) 404
HpySE526I ACGT 1 cut(s) 56
Hsp92II CATG 3 cut(s) 181, 188, 218
Ksp22I TGATCA 1 cut(s) 141
Kzo9I GATC 1 cut(s) 141
LmnI GCTCC 1 cut(s) 181
LpnPI CCDG 5 cut(s) 48, 95, 142, 169, 391
MaeII ACGT 1 cut(s) 56
MalI GATC 1 cut(s) 143
MboI GATC 1 cut(s) 141
MboII GAAGA 3 cut(s) 16, 103, 296
MhlI GDGCHC 3 cut(s) 65, 378, 405
MluCI AATT 3 cut(s) 95, 346, 409
MlyI GAGTC 1 cut(s) 335
MmeI TCCRAC 1 cut(s) 318
MnlI CCTC 3 cut(s) 106, 228, 333
MroXI GAANNNNTTC 1 cut(s) 8
MseI TTAA 1 cut(s) 390
MslI CAYNNNNRTG 1 cut(s) 312
MspI CCGG 1 cut(s) 35
MspR9I CCNGG 2 cut(s) 36, 157
MvaI CCWGG 1 cut(s) 157
MvnI CGCG 1 cut(s) 78
NciI CCSGG 1 cut(s) 36
NdeII GATC 1 cut(s) 141
NlaIII CATG 3 cut(s) 181, 188, 218
NlaIV GGNNCC 1 cut(s) 190
PdmI GAANNNNTTC 1 cut(s) 8
PfeI GAWTC 1 cut(s) 385
PleI GAGTC 1 cut(s) 335
PpsI GAGTC 1 cut(s) 335
Psp124BI GAGCTC 2 cut(s) 65, 405
Psp6I CCWGG 1 cut(s) 155
PspGI CCWGG 1 cut(s) 155
PspN4I GGNNCC 1 cut(s) 190
RsaI GTAC 2 cut(s) 124, 176
RsaNI GTAC 2 cut(s) 123, 175
RseI CAYNNNNRTG 1 cut(s) 312
SacI GAGCTC 2 cut(s) 65, 405
SaqAI TTAA 1 cut(s) 390
Sau3AI GATC 1 cut(s) 141
SchI GAGTC 1 cut(s) 335
ScrFI CCNGG 2 cut(s) 36, 157
SduI GDGCHC 3 cut(s) 65, 378, 405
SmiMI CAYNNNNRTG 1 cut(s) 312
SmlI CTYRAG 1 cut(s) 64
SmoI CTYRAG 1 cut(s) 64
Sse9I AATT 3 cut(s) 95, 346, 409
SsiI CCGC 1 cut(s) 78
SstI GAGCTC 2 cut(s) 65, 405
StyD4I CCNGG 2 cut(s) 34, 155
StyI CCWWGG 1 cut(s) 192
TaaI ACNGT 1 cut(s) 336
TaiI ACGT 1 cut(s) 59
TasI AATT 3 cut(s) 95, 346, 409
TatI WGTACW 2 cut(s) 122, 174
TfiI GAWTC 1 cut(s) 385
Tru1I TTAA 1 cut(s) 390
Tru9I TTAA 1 cut(s) 390
TscAI CASTG 1 cut(s) 262
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 262
XapI RAATTY 1 cut(s) 409
XmnI GAANNNNTTC 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.