Prupe.1G429600_v2.0.a1

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000166
Physical Location & Seq
Forward (+)
36850324 .. 36853456
3133 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G429600.1

Sequence Viewer

Length: 2400 bp
ATGGGTACTCTGTTTCTCATTTTTCTTCTCTCTCTGGCCATTCATTCTCCACTTTCTTCTTCAACCTCCGACTCATTGAGCAGAGGCTCCTCCCTCTCTGTAGAGAAACCAGAAGATGTTTTAGTTTCAGCTGATGGTGTTTTCACTGCTGGCTTCCATCAAGTGGGCAACAATTCATTTTGCTTTGCCATTTGGTTCACAGAGCCATCAATCTCCGACCACTATCGAAACCGCACCGTTGTCTGGATGGCCAATCGTGACCAACCGGTGAACGGAAAACGCTCAAAGCTCTCCCTCCAAAAAACTAGTAACCTCATCTTAACTGATGCGGGTCAGTCCATTGTTTGGGCCACAACCACTACTTCTTTCTCACCAGCTCACTTGAGCCTCCAAAACTCTGGTAATCTGGTTCTACTTCACTCGGGGAGTGTCGTTTTATGGCAAAGCTTTGATTCTCCAACTGATACCCTCCTCCCACTCCAACCCTTCACCAGAAAAGCAACACTTATCTCCACCAGAAGCCAGAGCAACTTCTCCTCTGGTTTCTATAAGCTGTTCTTCAACAATGACAACCTTCTTCGTCTTCTTTTCGACGGTCTCGAGATTTCCAGTGTTTATTGGCCCGACCCTTCTCGTGTGAGTTGGGATAATGCAAGGTCCACCTACAACAACAGCAGAAATGCCATGCTTGATTCCTTAGGCAGTTTTATCTCATCAGACAACTTGACTTTTCTGTCAGCCGATTATGGCGCAAAGCGGCAGAGAAGACTGAGGATTGATTTTGATGGTAATGTTCGATTGTATAGTCGAGAAAATTCAGGAGAGAAATGGGTAGTTTCATGGCAGGCCATCTCGGATTCTTGCATGATCCATGGGATTTGCGGAGCAAACAGCGTGTGTAGCTATGACCCTGGTTTTGGTAGAAAATGCTCATGCCTTCCAGGATATCAGATTATAAATCATACTGATTGGTCTTTTGGGTGTGAACCACAATTCAACCACTCCTACACCAAAGTTAATGAGTCCAGTTTCCTAAAACTTTCTCAAGTTGAGTTCTCTGGTTACGATTATAGCTCCTACCAAAATCGCACCTATGGAGAGTGCGAGAGCGTATGCTTGGACCTGTATAACTGCAGGGGGTTCCAATACACATTTGACAGTGGAAGTGGTGTTTATAACTGCAACCCGAAGACGCAGTTACGAAGTGGTCGCAGATCGGATTTACAAGGATACCTTTATCTAAGATTGCCTAAAGCCTACCTCTTCTCAAATCACTCTGACATGAAGTACCTAAAACAATTTGGGCTTAATTGCGCAGACACAGTTATTTATCTTGACCGGCAGTATGTAAAAAAGCATGTTAGTAAGCCAGTAAAATTCCTGCTGTGGTTTGGCTGTGGATTGGGAGGGTTTGAGATCATTTGTCTCCTTTTGTTTTTCGGTTTGTTAACTAGTAGAACCCGGAAAAGTTCCAAGCAGGATATGCATGATGGATACCTTCTTGCTGCAACTGGGTTCAAAAGATTTAGCTATGCGGAGCTCAAGAAGGCGACACGGGGTTTTAGTGAAGAAATTGGAAGAGGTGCCGGAGGAATTGTGTACAAGGGTGTATTGGCTGATGAACGAGTTGCAGCAATTAAGTTGCTTAATGAAGCTATTCAAGGAGAAGCTGAGTTTCTAGCTGAAGCTAGCACCCTTGGGAGGCTGAACCATATGCACTTGATAGAAATGTGGGGATACTGCTCAGAAAGAAAGCGAAAGCTGCTTGTTTATGAGTACATGGAGCATGGTTCCTTGGCACACAATTTGTCTTCCAATGTTCTTAATTGGGAGAAGAGGTTTGAGATTGCTGTAGGCACAGCGAAAGGTCTTGCTTATCTGCATGAAGAGTGCTTGGAGTGGGTTTTACACTGTGATGTCAAGCCTCAAAACATACTCTTGGACTCGAATTACCAACCAAAGGTGGCAGATTTTGGCCTCTCCAAGCTATTCAACAGAGGGGAGCTTAAGAATTCAAGCTTTTCAAGGATAAGAGGAACCAGAGGTTACATTGCTCCAGAGTGGGTTTACAATCTGCCTATCACATCCAAAGTGGATGTATACAGCTACGGGATTGTTGTGTTGGAGATGGTAACCGGAAAGAACCCGACAATGGGCGTGGATGCTATTGACAGGGAGCAGAGAAGACTGATCATGTCTGTTAGGGAGAAGGTAAATGGAACTAGTGCTATTGGACCACAGATGGGAATGATCATGGACCCCTCGTTTGAAGGTGAATACGATGTGGAGAAGATGGAAATTCTTCTAAGGGTCGCGTTACAATGCGTAGAGGAAGACAAAGATGCAAGACCCACCATGAGACAAGTTGTTGAGATGCTTCTGCACCATGACAAGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

800

Amino Acids

90.23

Weight (kDa)

7.98

Isoelectric Point (pI)

40.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 956, 1176
AasI GACNNNNNNGTC 1 cut(s) 733
Acc16I TGCGCA 1 cut(s) 1315
AccB1I GGYRCC 1 cut(s) 1583
AccB7I CCANNNNNTGG 2 cut(s) 163, 345
AccI GTMKAC 1 cut(s) 2100
AccII CGCG 1 cut(s) 2315
AciI CCGC 5 cut(s) 232, 329, 757, 882, 1535
AclWI GGATC 1 cut(s) 862
AcoI YGGCCR 2 cut(s) 36, 249
AcsI RAATTY 4 cut(s) 814, 1376, 2011, 2298
AcuI CTGAAG 1 cut(s) 1704
AfaI GTAC 4 cut(s) 7, 1289, 1601, 1778
AflII CTTAAG 1 cut(s) 2006
AgeI ACCGGT 1 cut(s) 265
AgsI TTSAA 9 cut(s) 63, 562, 997, 1519, 1661, 1993, 2016, 2025, 2270
AhlI ACTAGT 3 cut(s) 305, 1451, 2222
AjnI CCWGG 2 cut(s) 910, 940
Alw21I GWGCWC 1 cut(s) 1542
Alw26I GTCTC 3 cut(s) 602, 1430, 2353
AlwI GGATC 1 cut(s) 862
Ama87I CYCGRG 2 cut(s) 421, 599
AoxI GGCC 6 cut(s) 36, 249, 348, 620, 846, 1975
ApeKI GCWGC 3 cut(s) 1505, 1631, 1762
ApoI RAATTY 4 cut(s) 814, 1376, 2011, 2298
ArsI GACNNNNNNTTYG 4 cut(s) 899, 931, 2249, 2281
AsiGI ACCGGT 1 cut(s) 265
Asp700I GAANNNNTTC 2 cut(s) 1656, 2301
AspLEI GCGC 2 cut(s) 752, 1316
AspS9I GGNCC 6 cut(s) 348, 621, 657, 1120, 2234, 2257
AsuC2I CCSGG 1 cut(s) 1462
AsuHPI GGTGA 4 cut(s) 280, 363, 481, 2285
AsuNHI GCTAGC 1 cut(s) 1688
AvaI CYCGRG 2 cut(s) 421, 599
AvaII GGWCC 4 cut(s) 657, 1120, 2234, 2257
AxyI CCTNAGG 1 cut(s) 697
BalI TGGCCA 2 cut(s) 38, 251
BanI GGYRCC 1 cut(s) 1583
BanII GRGCYC 1 cut(s) 1542
BauI CACGAG 1 cut(s) 633
BbsI GAAGAC 6 cut(s) 575, 772, 1196, 1803, 2191, 2340
Bbv12I GWGCWC 1 cut(s) 1542
BbvI GCAGC 3 cut(s) 1492, 1643, 1749
BciT130I CCWGG 2 cut(s) 912, 942
BciVI GTATCC 3 cut(s) 1223, 1487, 1730
BclI TGATCA 2 cut(s) 2190, 2250
BcnI CCSGG 1 cut(s) 1462
BcoDI GTCTC 3 cut(s) 602, 1430, 2353
BcuI ACTAGT 3 cut(s) 305, 1451, 2222
BfaI CTAG 5 cut(s) 306, 1452, 1679, 1689, 2223
BfmI CTRYAG 3 cut(s) 99, 1132, 1851
BfrI CTTAAG 1 cut(s) 2006
BfuI GTATCC 3 cut(s) 1223, 1487, 1730
BisI GCNGC 4 cut(s) 758, 1506, 1632, 1763
BlsI GCNGC 4 cut(s) 759, 1507, 1633, 1764
Bme1390I CCNGG 3 cut(s) 912, 942, 1462
Bme18I GGWCC 4 cut(s) 657, 1120, 2234, 2257
BmeT110I CYCGRG 2 cut(s) 421, 599
BmgT120I GGNCC 6 cut(s) 348, 621, 657, 1120, 2234, 2257
BmiI GGNNCC 6 cut(s) 88, 1142, 1585, 1792, 2038, 2259
BmrFI CCNGG 3 cut(s) 912, 942, 1462
BmrI ACTGGG 1 cut(s) 1521
BmsI GCATC 4 cut(s) 316, 2152, 2332, 2364
BmtI GCTAGC 1 cut(s) 1692
BmuI ACTGGG 1 cut(s) 1521
BpiI GAAGAC 6 cut(s) 575, 772, 1196, 1803, 2191, 2340
BpmI CTGGAG 1 cut(s) 2040
BpuEI CTTGAG 3 cut(s) 403, 1029, 1526
BpuMI CCSGG 1 cut(s) 1462
BsaI GGTCTC 1 cut(s) 602
BsaJI CCNNGG 4 cut(s) 871, 910, 1696, 1794
BsaWI WCCGGW 2 cut(s) 265, 2135
BsaXI ACNNNNNCTCC 4 cut(s) 1581, 1611, 1823, 1853
Bse118I RCCGGY 2 cut(s) 265, 1338
Bse1I ACTGG 4 cut(s) 609, 1026, 1370, 1516
Bse21I CCTNAGG 1 cut(s) 697
Bse3DI GCAATG 1 cut(s) 2049
BseBI CCWGG 2 cut(s) 912, 942
BseDI CCNNGG 4 cut(s) 871, 910, 1696, 1794
BseGI GGATG 4 cut(s) 252, 2084, 2101, 2167
BseMI GCAATG 1 cut(s) 2049
BseMII CTCAG 3 cut(s) 761, 1662, 1758
BseNI ACTGG 4 cut(s) 609, 1026, 1370, 1516
BseRI GAGGAG 3 cut(s) 79, 461, 526
BseXI GCAGC 3 cut(s) 1492, 1643, 1749
BsgI GTGCAG 1 cut(s) 2366
Bsh1236I CGCG 1 cut(s) 2315
BshFI GGCC 6 cut(s) 38, 251, 350, 622, 848, 1977
BshNI GGYRCC 1 cut(s) 1583
BshTI ACCGGT 1 cut(s) 265
BsiHKAI GWGCWC 1 cut(s) 1542
BsiHKCI CYCGRG 2 cut(s) 421, 599
BsiSI CCGG 5 cut(s) 266, 1339, 1462, 1587, 2136
BsmAI GTCTC 3 cut(s) 602, 1430, 2353
BsnI GGCC 6 cut(s) 38, 251, 350, 622, 848, 1977
Bso31I GGTCTC 1 cut(s) 602
BsoBI CYCGRG 2 cut(s) 421, 599
Bsp1286I GDGCHC 1 cut(s) 1542
Bsp1407I TGTACA 1 cut(s) 1599
Bsp143I GATC 5 cut(s) 867, 1214, 1416, 2190, 2250
Bsp19I CCATGG 1 cut(s) 871
BspACI CCGC 5 cut(s) 232, 329, 757, 882, 1535
BspANI GGCC 6 cut(s) 38, 251, 350, 622, 848, 1977
BspCNI CTCAG 3 cut(s) 762, 1663, 1757
BspFNI CGCG 1 cut(s) 2315
BspLI GGNNCC 6 cut(s) 88, 1142, 1585, 1792, 2038, 2259
BspMAI CTGCAG 1 cut(s) 1136
BspOI GCTAGC 1 cut(s) 1692
BspPI GGATC 1 cut(s) 862
BspT107I GGYRCC 1 cut(s) 1583
BspTI CTTAAG 1 cut(s) 2006
BspTNI GGTCTC 1 cut(s) 602
BsrDI GCAATG 1 cut(s) 2049
BsrFI RCCGGY 2 cut(s) 265, 1338
BsrGI TGTACA 1 cut(s) 1599
BsrI ACTGG 4 cut(s) 609, 1026, 1370, 1516
BssAI RCCGGY 2 cut(s) 265, 1338
BssECI CCNNGG 4 cut(s) 871, 910, 1696, 1794
BssMI GATC 5 cut(s) 867, 1214, 1416, 2190, 2250
BssNAI GTATAC 1 cut(s) 2101
BssSI CACGAG 1 cut(s) 633
BssT1I CCWWGG 3 cut(s) 871, 1696, 1794
Bst1107I GTATAC 1 cut(s) 2101
Bst2BI CACGAG 1 cut(s) 633
Bst2UI CCWGG 2 cut(s) 912, 942
Bst4CI ACNGT 5 cut(s) 238, 596, 1160, 1324, 1913
Bst6I CTCTTC 4 cut(s) 1268, 1573, 1829, 1881
BstAFI CTTAAG 1 cut(s) 2006
BstAPI GCANNNNNTGC 1 cut(s) 1483
BstAUI TGTACA 1 cut(s) 1599
BstC8I GCNNGC 3 cut(s) 151, 846, 1690
BstDEI CTNAG 6 cut(s) 697, 770, 1241, 1671, 1744, 2306
BstDSI CCRYGG 1 cut(s) 871
BstEII GGTNACC 1 cut(s) 2131
BstF5I GGATG 4 cut(s) 252, 2084, 2101, 2167
BstFNI CGCG 1 cut(s) 2315
BstHHI GCGC 2 cut(s) 752, 1316
BstKTI GATC 5 cut(s) 870, 1217, 1419, 2193, 2253
BstMAI GTCTC 3 cut(s) 602, 1430, 2353
BstMBI GATC 5 cut(s) 867, 1214, 1416, 2190, 2250
BstMWI GCNNNNNNNGC 3 cut(s) 900, 1483, 1762
BstNI CCWGG 2 cut(s) 912, 942
BstNSI RCATGY 1 cut(s) 1361
BstPI GGTNACC 1 cut(s) 2131
BstSCI CCNGG 3 cut(s) 910, 940, 1460
BstSFI CTRYAG 3 cut(s) 99, 1132, 1851
BstUI CGCG 1 cut(s) 2315
BstV1I GCAGC 3 cut(s) 1492, 1643, 1749
BstV2I GAAGAC 6 cut(s) 575, 772, 1196, 1803, 2191, 2340
BstXI CCANNNNNNTGG 1 cut(s) 398
BstZ17I GTATAC 1 cut(s) 2101
Bsu36I CCTNAGG 1 cut(s) 697
BsuI GTATCC 3 cut(s) 1223, 1487, 1730
BsuRI GGCC 6 cut(s) 38, 251, 350, 622, 848, 1977
BtgI CCRYGG 1 cut(s) 871
BtsCI GGATG 4 cut(s) 252, 2084, 2101, 2167
BtsI GCAGTG 1 cut(s) 144
BtsIMutI CAGTG 4 cut(s) 144, 616, 1165, 1909
Cac8I GCNNGC 3 cut(s) 151, 846, 1690
CfoI GCGC 2 cut(s) 752, 1316
Cfr10I RCCGGY 2 cut(s) 265, 1338
Cfr13I GGNCC 6 cut(s) 348, 621, 657, 1120, 2234, 2257
CseI GACGC 1 cut(s) 1201
Csp6I GTAC 4 cut(s) 6, 1288, 1600, 1777
CspAI ACCGGT 1 cut(s) 265
CspCI CAANNNNNGTGG 2 cut(s) 2139, 2174
CviQI GTAC 4 cut(s) 6, 1288, 1600, 1777
DdeI CTNAG 6 cut(s) 697, 770, 1241, 1671, 1744, 2306
DpnI GATC 5 cut(s) 869, 1216, 1418, 2192, 2252
DpnII GATC 5 cut(s) 867, 1214, 1416, 2190, 2250
DrdI GACNNNNNNGTC 1 cut(s) 733
DseDI GACNNNNNNGTC 1 cut(s) 733
EaeI YGGCCR 2 cut(s) 36, 249
Eam1104I CTCTTC 4 cut(s) 1268, 1573, 1829, 1881
EarI CTCTTC 4 cut(s) 1268, 1573, 1829, 1881
Ecl136II GAGCTC 1 cut(s) 1540
Eco130I CCWWGG 3 cut(s) 871, 1696, 1794
Eco24I GRGCYC 1 cut(s) 1542
Eco31I GGTCTC 1 cut(s) 602
Eco32I GATATC 1 cut(s) 947
Eco47I GGWCC 4 cut(s) 657, 1120, 2234, 2257
Eco53kI GAGCTC 1 cut(s) 1540
Eco57I CTGAAG 1 cut(s) 1704
Eco81I CCTNAGG 1 cut(s) 697
Eco88I CYCGRG 2 cut(s) 421, 599
Eco91I GGTNACC 1 cut(s) 2131
EcoICRI GAGCTC 1 cut(s) 1540
EcoO65I GGTNACC 1 cut(s) 2131
EcoRI GAATTC 1 cut(s) 2011
EcoRII CCWGG 2 cut(s) 910, 940
EcoRV GATATC 1 cut(s) 947
EcoT14I CCWWGG 3 cut(s) 871, 1696, 1794
EcoT22I ATGCAT 1 cut(s) 1488
EcoT38I GRGCYC 1 cut(s) 1542
ErhI CCWWGG 3 cut(s) 871, 1696, 1794
FalI AAGNNNNNCTT 6 cut(s) 489, 521, 542, 574, 1218, 1250
FauI CCCGC 1 cut(s) 322
FauNDI CATATG 1 cut(s) 1713
FbaI TGATCA 2 cut(s) 2190, 2250
FblI GTMKAC 1 cut(s) 2100
Fnu4HI GCNGC 4 cut(s) 758, 1506, 1632, 1763
FokI GGATG 4 cut(s) 259, 2071, 2108, 2174
FriOI GRGCYC 1 cut(s) 1542
Fsp4HI GCNGC 4 cut(s) 758, 1506, 1632, 1763
FspBI CTAG 5 cut(s) 306, 1452, 1679, 1689, 2223
FspI TGCGCA 1 cut(s) 1315
GlaI GCGC 2 cut(s) 751, 1315
GluI GCNGC 4 cut(s) 758, 1506, 1632, 1763
GsuI CTGGAG 1 cut(s) 2040
HaeIII GGCC 6 cut(s) 38, 251, 350, 622, 848, 1977
HapII CCGG 5 cut(s) 266, 1339, 1462, 1587, 2136
HgaI GACGC 1 cut(s) 1201
HhaI GCGC 2 cut(s) 752, 1316
Hin6I GCGC 2 cut(s) 750, 1314
HinP1I GCGC 2 cut(s) 750, 1314
HincII GTYRAC 1 cut(s) 1449
HindII GTYRAC 1 cut(s) 1449
HindIII AAGCTT 2 cut(s) 445, 2017
HinfI GANTC 6 cut(s) 71, 452, 692, 857, 1022, 1943
HpaI GTTAAC 1 cut(s) 1449
HpaII CCGG 5 cut(s) 266, 1339, 1462, 1587, 2136
HphI GGTGA 4 cut(s) 280, 363, 481, 2285
Hpy166II GTNNAC 8 cut(s) 198, 271, 660, 986, 1449, 1600, 2068, 2101
Hpy188I TCNGA 8 cut(s) 70, 217, 718, 856, 951, 1219, 1279, 1747
Hpy188III TCNNGA 9 cut(s) 244, 257, 599, 601, 809, 819, 1334, 1543, 2057
Hpy8I GTNNAC 8 cut(s) 198, 271, 660, 986, 1449, 1600, 2068, 2101
Hpy99I CGWCG 1 cut(s) 596
HpyAV CCTTC 8 cut(s) 496, 584, 639, 947, 1508, 1540, 2203, 2264
HpyCH4III ACNGT 5 cut(s) 238, 596, 1160, 1324, 1913
HpyF10VI GCNNNNNNNGC 3 cut(s) 900, 1483, 1762
HpyF3I CTNAG 6 cut(s) 697, 770, 1241, 1671, 1744, 2306
HspAI GCGC 2 cut(s) 750, 1314
Ksp22I TGATCA 2 cut(s) 2190, 2250
KspAI GTTAAC 1 cut(s) 1449
Kzo9I GATC 5 cut(s) 867, 1214, 1416, 2190, 2250
LmnI GCTCC 8 cut(s) 92, 884, 1079, 1537, 1783, 2002, 2059, 2176
Lsp1109I GCAGC 3 cut(s) 1492, 1643, 1749
LweI GCATC 4 cut(s) 316, 2152, 2332, 2364
MaeI CTAG 5 cut(s) 306, 1452, 1679, 1689, 2223
MaeIII GTNAC 7 cut(s) 257, 308, 1061, 1197, 2045, 2131, 2316
MalI GATC 5 cut(s) 869, 1216, 1418, 2192, 2252
MboI GATC 5 cut(s) 867, 1214, 1416, 2190, 2250
MhlI GDGCHC 1 cut(s) 1542
MlsI TGGCCA 2 cut(s) 38, 251
MluNI TGGCCA 2 cut(s) 38, 251
MlyI GAGTC 3 cut(s) 65, 1031, 1937
MmeI TCCRAC 5 cut(s) 93, 240, 482, 505, 2103
Mox20I TGGCCA 2 cut(s) 38, 251
Mph1103I ATGCAT 1 cut(s) 1488
MroXI GAANNNNTTC 2 cut(s) 1656, 2301
MscI TGGCCA 2 cut(s) 38, 251
MseI TTAA 9 cut(s) 320, 1017, 1308, 1448, 1638, 1647, 1824, 2007, 2398
MslI CAYNNNNRTG 1 cut(s) 1914
Msp20I TGGCCA 2 cut(s) 38, 251
MspA1I CMGCKG 1 cut(s) 131
MspCI CTTAAG 1 cut(s) 2006
MspI CCGG 5 cut(s) 266, 1339, 1462, 1587, 2136
MspR9I CCNGG 3 cut(s) 912, 942, 1462
MvaI CCWGG 2 cut(s) 912, 942
MvnI CGCG 1 cut(s) 2315
MwoI GCNNNNNNNGC 3 cut(s) 900, 1483, 1762
NciI CCSGG 1 cut(s) 1462
NcoI CCATGG 1 cut(s) 871
NdeI CATATG 1 cut(s) 1713
NdeII GATC 5 cut(s) 867, 1214, 1416, 2190, 2250
NheI GCTAGC 1 cut(s) 1688
NlaIV GGNNCC 6 cut(s) 88, 1142, 1585, 1792, 2038, 2259
NmuCI GTSAC 1 cut(s) 257
NsbI TGCGCA 1 cut(s) 1315
NsiI ATGCAT 1 cut(s) 1488
NspI RCATGY 1 cut(s) 1361
PaeR7I CTCGAG 1 cut(s) 599
PcsI WCGNNNNNNNCGW 1 cut(s) 597
PdmI GAANNNNTTC 2 cut(s) 1656, 2301
PfeI GAWTC 3 cut(s) 452, 692, 857
PflMI CCANNNNNTGG 2 cut(s) 163, 345
PfoI TCCNGGA 1 cut(s) 940
PinAI ACCGGT 1 cut(s) 265
PkrI GCNGC 4 cut(s) 759, 1507, 1633, 1764
PleI GAGTC 3 cut(s) 65, 1030, 1937
PpsI GAGTC 3 cut(s) 65, 1030, 1937
PsiI TTATAA 2 cut(s) 956, 1176
Psp124BI GAGCTC 1 cut(s) 1542
Psp6I CCWGG 2 cut(s) 910, 940
PspEI GGTNACC 1 cut(s) 2131
PspGI CCWGG 2 cut(s) 910, 940
PspN4I GGNNCC 6 cut(s) 88, 1142, 1585, 1792, 2038, 2259
PspPI GGNCC 6 cut(s) 348, 621, 657, 1120, 2234, 2257
PstI CTGCAG 1 cut(s) 1136
PvuII CAGCTG 1 cut(s) 131
RsaI GTAC 4 cut(s) 7, 1289, 1601, 1778
RsaNI GTAC 4 cut(s) 6, 1288, 1600, 1777
RseI CAYNNNNRTG 1 cut(s) 1914
SacI GAGCTC 1 cut(s) 1542
SaqAI TTAA 9 cut(s) 320, 1017, 1308, 1448, 1638, 1647, 1824, 2007, 2398
SatI GCNGC 4 cut(s) 758, 1506, 1632, 1763
Sau3AI GATC 5 cut(s) 867, 1214, 1416, 2190, 2250
Sau96I GGNCC 6 cut(s) 348, 621, 657, 1120, 2234, 2257
SchI GAGTC 3 cut(s) 65, 1031, 1937
ScrFI CCNGG 3 cut(s) 912, 942, 1462
SduI GDGCHC 1 cut(s) 1542
SfaNI GCATC 4 cut(s) 316, 2152, 2332, 2364
SfcI CTRYAG 3 cut(s) 99, 1132, 1851
Sfr274I CTCGAG 1 cut(s) 599
SinI GGWCC 4 cut(s) 657, 1120, 2234, 2257
SlaI CTCGAG 1 cut(s) 599
SmiMI CAYNNNNRTG 1 cut(s) 1914
SmlI CTYRAG 5 cut(s) 382, 599, 1044, 1541, 2006
SmoI CTYRAG 5 cut(s) 382, 599, 1044, 1541, 2006
SpeI ACTAGT 3 cut(s) 305, 1451, 2222
SsiI CCGC 5 cut(s) 232, 329, 757, 882, 1535
SspMI CTAG 5 cut(s) 306, 1452, 1679, 1689, 2223
SstI GAGCTC 1 cut(s) 1542
StyD4I CCNGG 3 cut(s) 910, 940, 1460
StyI CCWWGG 3 cut(s) 871, 1696, 1794
TaaI ACNGT 5 cut(s) 238, 596, 1160, 1324, 1913
TaqI TCGA 6 cut(s) 226, 591, 600, 796, 808, 1946
TatI WGTACW 2 cut(s) 1599, 1776
TauI GCSGC 1 cut(s) 760
TfiI GAWTC 3 cut(s) 452, 692, 857
Tru1I TTAA 9 cut(s) 320, 1017, 1308, 1448, 1638, 1647, 1824, 2007, 2398
Tru9I TTAA 9 cut(s) 320, 1017, 1308, 1448, 1638, 1647, 1824, 2007, 2398
TscAI CASTG 4 cut(s) 151, 616, 1165, 1916
TseFI GTSAC 1 cut(s) 257
TseI GCWGC 3 cut(s) 1505, 1631, 1762
Tsp45I GTSAC 1 cut(s) 257
TspDTI ATGAA 7 cut(s) 32, 165, 828, 1298, 1635, 1665, 1899
TspGWI ACGGA 1 cut(s) 288
TspRI CASTG 4 cut(s) 151, 616, 1165, 1916
Van91I CCANNNNNTGG 2 cut(s) 163, 345
Vha464I CTTAAG 1 cut(s) 2006
VpaK11BI GGWCC 4 cut(s) 657, 1120, 2234, 2257
XapI RAATTY 4 cut(s) 814, 1376, 2011, 2298
XceI RCATGY 1 cut(s) 1361
XhoI CTCGAG 1 cut(s) 599
XmiI GTMKAC 1 cut(s) 2100
XmnI GAANNNNTTC 2 cut(s) 1656, 2301
XspI CTAG 5 cut(s) 306, 1452, 1679, 1689, 2223
Zsp2I ATGCAT 1 cut(s) 1488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.