Receptor protein kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B_lectin | PF01453 | 82 - 167 | 5.4e-22 | D-mannose binding lectin |
| S_locus_glycop | PF00954 | 254 - 323 | 1.3e-08 | S-locus glycoprotein domain |
| B_lectin | PF01453 | 647 - 733 | 6.1e-22 | D-mannose binding lectin |
| S_locus_glycop | PF00954 | 818 - 885 | 3.1e-07 | S-locus glycoprotein domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1080, 1179 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 275, 1970 |
| AatII | GACGTC | 1 cut(s) | 3531 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1947, 1976, 2049 |
| AccI | GTMKAC | 3 cut(s) | 627, 671, 3121 |
| AccII | CGCG | 3 cut(s) | 1549, 3244, 3623 |
| AciI | CCGC | 5 cut(s) | 147, 510, 1549, 1857, 3244 |
| AclI | AACGTT | 1 cut(s) | 2046 |
| AclWI | GGATC | 6 cut(s) | 12, 914, 1715, 2555, 2817, 2953 |
| AcoI | YGGCCR | 2 cut(s) | 36, 1953 |
| AcsI | RAATTY | 4 cut(s) | 888, 1376, 1667, 3071 |
| AcuI | CTGAAG | 3 cut(s) | 452, 1313, 2052 |
| AcyI | GRCGYC | 2 cut(s) | 2352, 3528 |
| AdeI | CACNNNGTG | 1 cut(s) | 134 |
| AfaI | GTAC | 9 cut(s) | 102, 1088, 1157, 1456, 1687, 1700, 2765, 3179, 3368 |
| AfeI | AGCGCT | 1 cut(s) | 290 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 281, 354, 929, 930, 1947, 1976, 2049, 2621 |
| AflII | CTTAAG | 2 cut(s) | 2086, 3230 |
| AflIII | ACRYGT | 1 cut(s) | 1158 |
| AjnI | CCWGG | 4 cut(s) | 130, 829, 952, 2644 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 43, 75, 1109, 1141 |
| Alw21I | GWGCWC | 1 cut(s) | 1536 |
| AlwI | GGATC | 6 cut(s) | 12, 914, 1715, 2555, 2817, 2953 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 909 |
| Ama87I | CYCGRG | 3 cut(s) | 1334, 2227, 2750 |
| Aor51HI | AGCGCT | 1 cut(s) | 290 |
| AoxI | GGCC | 6 cut(s) | 36, 607, 632, 1953, 2344, 2514 |
| ApoI | RAATTY | 4 cut(s) | 888, 1376, 1667, 3071 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3527, 3559 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 117, 1479, 2632 |
| AspA2I | CCTAGG | 1 cut(s) | 2401 |
| AspLEI | GCGC | 1 cut(s) | 291 |
| AspS9I | GGNCC | 7 cut(s) | 357, 608, 633, 2052, 2361, 2514, 2588 |
| AsuC2I | CCSGG | 4 cut(s) | 1507, 1861, 2513, 2523 |
| AsuII | TTCGAA | 1 cut(s) | 3585 |
| AvaI | CYCGRG | 3 cut(s) | 1334, 2227, 2750 |
| AvaII | GGWCC | 4 cut(s) | 357, 2052, 2361, 2588 |
| AvrII | CCTAGG | 1 cut(s) | 2401 |
| AxyI | CCTNAGG | 1 cut(s) | 709 |
| BaeGI | GKGCMC | 1 cut(s) | 1215 |
| BalI | TGGCCA | 2 cut(s) | 38, 1955 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 1536 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3579, 3611 |
| BbsI | GAAGAC | 4 cut(s) | 440, 1761, 2476, 3618 |
| Bbv12I | GWGCWC | 1 cut(s) | 1536 |
| BceAI | ACGGC | 5 cut(s) | 622, 1501, 2317, 2372, 3036 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1618, 1652, 2435, 2469 |
| BciT130I | CCWGG | 4 cut(s) | 132, 831, 954, 2646 |
| BciVI | GTATCC | 1 cut(s) | 2768 |
| BclI | TGATCA | 3 cut(s) | 1612, 3307, 3459 |
| BcnI | CCSGG | 4 cut(s) | 1507, 1861, 2513, 2523 |
| BfmI | CTRYAG | 3 cut(s) | 246, 910, 1809 |
| BfoI | RGCGCY | 1 cut(s) | 292 |
| BfrI | CTTAAG | 2 cut(s) | 2086, 3230 |
| BfuI | GTATCC | 1 cut(s) | 2768 |
| BlnI | CCTAGG | 1 cut(s) | 2401 |
| BlpI | GCTNAGC | 2 cut(s) | 1530, 3225 |
| BmcAI | AGTACT | 2 cut(s) | 1687, 1700 |
| Bme1390I | CCNGG | 8 cut(s) | 132, 831, 954, 1507, 1861, 2513, 2523, 2646 |
| Bme18I | GGWCC | 4 cut(s) | 357, 2052, 2361, 2588 |
| BmeT110I | CYCGRG | 3 cut(s) | 1334, 2227, 2750 |
| BmgT120I | GGNCC | 7 cut(s) | 357, 608, 633, 2052, 2361, 2514, 2588 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrFI | CCNGG | 8 cut(s) | 132, 831, 954, 1507, 1861, 2513, 2523, 2646 |
| BmrI | ACTGGG | 1 cut(s) | 918 |
| BmsI | GCATC | 5 cut(s) | 325, 1112, 2450, 3421, 3642 |
| BmuI | ACTGGG | 1 cut(s) | 918 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2034 |
| BpiI | GAAGAC | 4 cut(s) | 440, 1761, 2476, 3618 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1530, 3225 |
| Bpu14I | TTCGAA | 1 cut(s) | 3585 |
| BpuEI | CTTGAG | 3 cut(s) | 1212, 1520, 2324 |
| BpuMI | CCSGG | 4 cut(s) | 1507, 1861, 2513, 2523 |
| BsaHI | GRCGYC | 2 cut(s) | 2352, 3528 |
| BsaI | GGTCTC | 3 cut(s) | 990, 2922, 3619 |
| BsaJI | CCNNGG | 5 cut(s) | 1254, 1300, 2333, 2401, 3349 |
| BsaWI | WCCGGW | 5 cut(s) | 407, 1840, 2621, 3153, 3401 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1543, 1573, 1575, 1605, 3270, 3300 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 281, 354, 929, 930, 1947, 1976, 2049, 2621 |
| Bse118I | RCCGGY | 3 cut(s) | 149, 1369, 2077 |
| Bse21I | CCTNAGG | 1 cut(s) | 709 |
| Bse3DI | GCAATG | 1 cut(s) | 3598 |
| BseBI | CCWGG | 4 cut(s) | 132, 831, 954, 2646 |
| BseDI | CCNNGG | 5 cut(s) | 1254, 1300, 2333, 2401, 3349 |
| BseGI | GGATG | 8 cut(s) | 89, 261, 1799, 1849, 1956, 2441, 3367, 3436 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 281, 354, 929, 930, 1947, 1976, 2049, 2621 |
| BseMI | GCAATG | 1 cut(s) | 3598 |
| BseMII | CTCAG | 7 cut(s) | 603, 1235, 1521, 1654, 2685, 3159, 3216 |
| BseRI | GAGGAG | 8 cut(s) | 36, 296, 538, 1590, 1599, 1991, 2230, 3285 |
| BseSI | GKGCMC | 1 cut(s) | 1215 |
| BseYI | CCCAGC | 1 cut(s) | 654 |
| BsgI | GTGCAG | 3 cut(s) | 383, 2475, 2623 |
| Bsh1236I | CGCG | 3 cut(s) | 1549, 3244, 3623 |
| BshFI | GGCC | 6 cut(s) | 38, 609, 634, 1955, 2346, 2516 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1536 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1334, 2227, 2750 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 281, 354, 929, 930, 1947, 1976, 2049, 2621 |
| BsmBI | CGTCTC | 3 cut(s) | 2343, 3519, 3612 |
| BsmI | GAATGC | 1 cut(s) | 2640 |
| BsnI | GGCC | 6 cut(s) | 38, 609, 634, 1955, 2346, 2516 |
| Bso31I | GGTCTC | 3 cut(s) | 990, 2922, 3619 |
| BsoBI | CYCGRG | 3 cut(s) | 1334, 2227, 2750 |
| Bsp119I | TTCGAA | 1 cut(s) | 3585 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1215, 1536 |
| Bsp1407I | TGTACA | 2 cut(s) | 100, 3366 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1530, 3225 |
| BspACI | CCGC | 5 cut(s) | 147, 510, 1549, 1857, 3244 |
| BspANI | GGCC | 6 cut(s) | 38, 609, 634, 1955, 2346, 2516 |
| BspCNI | CTCAG | 7 cut(s) | 604, 1236, 1522, 1653, 2686, 3160, 3217 |
| BspFNI | CGCG | 3 cut(s) | 1549, 3244, 3623 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspMAI | CTGCAG | 1 cut(s) | 914 |
| BspPI | GGATC | 6 cut(s) | 12, 914, 1715, 2555, 2817, 2953 |
| BspQI | GCTCTTC | 2 cut(s) | 2264, 3041 |
| BspT104I | TTCGAA | 1 cut(s) | 3585 |
| BspTI | CTTAAG | 2 cut(s) | 2086, 3230 |
| BspTNI | GGTCTC | 3 cut(s) | 990, 2922, 3619 |
| BsrDI | GCAATG | 1 cut(s) | 3598 |
| BsrFI | RCCGGY | 3 cut(s) | 149, 1369, 2077 |
| BsrGI | TGTACA | 2 cut(s) | 100, 3366 |
| BssAI | RCCGGY | 3 cut(s) | 149, 1369, 2077 |
| BssECI | CCNNGG | 5 cut(s) | 1254, 1300, 2333, 2401, 3349 |
| BssNAI | GTATAC | 1 cut(s) | 3122 |
| BssNI | GRCGYC | 2 cut(s) | 2352, 3528 |
| BssT1I | CCWWGG | 4 cut(s) | 1254, 1300, 2401, 3349 |
| Bst1107I | GTATAC | 1 cut(s) | 3122 |
| Bst2UI | CCWGG | 4 cut(s) | 132, 831, 954, 2646 |
| Bst4CI | ACNGT | 5 cut(s) | 1961, 2300, 2479, 2896, 3182 |
| Bst6I | CTCTTC | 6 cut(s) | 730, 1271, 2178, 2264, 3041, 3262 |
| BstACI | GRCGYC | 2 cut(s) | 2352, 3528 |
| BstAFI | CTTAAG | 2 cut(s) | 2086, 3230 |
| BstAUI | TGTACA | 2 cut(s) | 100, 3366 |
| BstBI | TTCGAA | 1 cut(s) | 3585 |
| BstC8I | GCNNGC | 4 cut(s) | 151, 398, 858, 3446 |
| BstDSI | CCRYGG | 1 cut(s) | 2333 |
| BstEII | GGTNACC | 2 cut(s) | 3182, 3397 |
| BstF5I | GGATG | 8 cut(s) | 89, 261, 1799, 1849, 1956, 2441, 3367, 3436 |
| BstFNI | CGCG | 3 cut(s) | 1549, 3244, 3623 |
| BstH2I | RGCGCY | 1 cut(s) | 292 |
| BstHHI | GCGC | 1 cut(s) | 291 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 295, 912, 1210, 1655, 2746, 3302, 3454 |
| BstNI | CCWGG | 4 cut(s) | 132, 831, 954, 2646 |
| BstNSI | RCATGY | 1 cut(s) | 2135 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2034 |
| BstPI | GGTNACC | 2 cut(s) | 3182, 3397 |
| BstSCI | CCNGG | 8 cut(s) | 130, 829, 952, 1505, 1859, 2511, 2521, 2644 |
| BstSFI | CTRYAG | 3 cut(s) | 246, 910, 1809 |
| BstSLI | GKGCMC | 1 cut(s) | 1215 |
| BstUI | CGCG | 3 cut(s) | 1549, 3244, 3623 |
| BstV2I | GAAGAC | 4 cut(s) | 440, 1761, 2476, 3618 |
| BstX2I | RGATCY | 4 cut(s) | 4, 2560, 2809, 2958 |
| BstYI | RGATCY | 4 cut(s) | 4, 2560, 2809, 2958 |
| BstZ17I | GTATAC | 1 cut(s) | 3122 |
| Bsu36I | CCTNAGG | 1 cut(s) | 709 |
| BsuI | GTATCC | 1 cut(s) | 2768 |
| BsuRI | GGCC | 6 cut(s) | 38, 609, 634, 1955, 2346, 2516 |
| BtgI | CCRYGG | 1 cut(s) | 2333 |
| BtsCI | GGATG | 8 cut(s) | 89, 261, 1799, 1849, 1956, 2441, 3367, 3436 |
| BtsIMutI | CAGTG | 3 cut(s) | 1648, 2901, 3165 |
| Cac8I | GCNNGC | 4 cut(s) | 151, 398, 858, 3446 |
| CaiI | CAGNNNCTG | 1 cut(s) | 909 |
| CfoI | GCGC | 1 cut(s) | 291 |
| Cfr10I | RCCGGY | 3 cut(s) | 149, 1369, 2077 |
| Cfr13I | GGNCC | 7 cut(s) | 357, 608, 633, 2052, 2361, 2514, 2588 |
| CseI | GACGC | 6 cut(s) | 80, 1204, 2039, 2360, 3250, 3629 |
| CsiI | ACCWGGT | 1 cut(s) | 130 |
| Csp6I | GTAC | 9 cut(s) | 101, 1087, 1156, 1455, 1686, 1699, 2764, 3178, 3367 |
| CviAII | CATG | 8 cut(s) | 697, 852, 884, 1711, 2132, 2218, 2576, 3463 |
| CviQI | GTAC | 9 cut(s) | 101, 1087, 1156, 1455, 1686, 1699, 2764, 3178, 3367 |
| DraIII | CACNNNGTG | 1 cut(s) | 134 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 275, 1970 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 275, 1970 |
| EaeI | YGGCCR | 2 cut(s) | 36, 1953 |
| Eam1104I | CTCTTC | 6 cut(s) | 730, 1271, 2178, 2264, 3041, 3262 |
| EarI | CTCTTC | 6 cut(s) | 730, 1271, 2178, 2264, 3041, 3262 |
| Ecl136II | GAGCTC | 1 cut(s) | 1534 |
| Eco130I | CCWWGG | 4 cut(s) | 1254, 1300, 2401, 3349 |
| Eco24I | GRGCYC | 1 cut(s) | 1536 |
| Eco31I | GGTCTC | 3 cut(s) | 990, 2922, 3619 |
| Eco32I | GATATC | 1 cut(s) | 959 |
| Eco47I | GGWCC | 4 cut(s) | 357, 2052, 2361, 2588 |
| Eco47III | AGCGCT | 1 cut(s) | 290 |
| Eco53kI | GAGCTC | 1 cut(s) | 1534 |
| Eco57I | CTGAAG | 3 cut(s) | 452, 1313, 2052 |
| Eco81I | CCTNAGG | 1 cut(s) | 709 |
| Eco88I | CYCGRG | 3 cut(s) | 1334, 2227, 2750 |
| Eco91I | GGTNACC | 2 cut(s) | 3182, 3397 |
| EcoICRI | GAGCTC | 1 cut(s) | 1534 |
| EcoO65I | GGTNACC | 2 cut(s) | 3182, 3397 |
| EcoRII | CCWGG | 4 cut(s) | 130, 829, 952, 2644 |
| EcoRV | GATATC | 1 cut(s) | 959 |
| EcoT14I | CCWWGG | 4 cut(s) | 1254, 1300, 2401, 3349 |
| EcoT38I | GRGCYC | 1 cut(s) | 1536 |
| ErhI | CCWWGG | 4 cut(s) | 1254, 1300, 2401, 3349 |
| Esp3I | CGTCTC | 3 cut(s) | 2343, 3519, 3612 |
| FaeI | CATG | 8 cut(s) | 700, 855, 887, 1714, 2135, 2221, 2579, 3466 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 658, 690, 2246, 2278 |
| FatI | CATG | 8 cut(s) | 696, 851, 883, 1710, 2131, 2217, 2575, 3462 |
| FauI | CCCGC | 1 cut(s) | 3237 |
| FauNDI | CATATG | 1 cut(s) | 646 |
| FbaI | TGATCA | 3 cut(s) | 1612, 3307, 3459 |
| FblI | GTMKAC | 3 cut(s) | 627, 671, 3121 |
| FokI | GGATG | 8 cut(s) | 76, 268, 1786, 1856, 1963, 2428, 3374, 3443 |
| FriOI | GRGCYC | 1 cut(s) | 1536 |
| GlaI | GCGC | 1 cut(s) | 290 |
| GsaI | CCCAGC | 1 cut(s) | 658 |
| HaeII | RGCGCY | 1 cut(s) | 292 |
| HaeIII | GGCC | 6 cut(s) | 38, 609, 634, 1955, 2346, 2516 |
| HgaI | GACGC | 6 cut(s) | 80, 1204, 2039, 2360, 3250, 3629 |
| HhaI | GCGC | 1 cut(s) | 291 |
| Hin1I | GRCGYC | 2 cut(s) | 2352, 3528 |
| Hin1II | CATG | 8 cut(s) | 700, 855, 887, 1714, 2135, 2221, 2579, 3466 |
| Hin6I | GCGC | 1 cut(s) | 289 |
| HinP1I | GCGC | 1 cut(s) | 289 |
| HincII | GTYRAC | 3 cut(s) | 280, 998, 3667 |
| HindII | GTYRAC | 3 cut(s) | 280, 998, 3667 |
| Hpy99I | CGWCG | 4 cut(s) | 74, 2033, 2300, 3244 |
| HpyCH4III | ACNGT | 5 cut(s) | 1961, 2300, 2479, 2896, 3182 |
| HpyCH4IV | ACGT | 4 cut(s) | 351, 1160, 2046, 3528 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 295, 912, 1210, 1655, 2746, 3302, 3454 |
| HpySE526I | ACGT | 4 cut(s) | 351, 1160, 2046, 3528 |
| Hsp92I | GRCGYC | 2 cut(s) | 2352, 3528 |
| Hsp92II | CATG | 8 cut(s) | 700, 855, 887, 1714, 2135, 2221, 2579, 3466 |
| HspAI | GCGC | 1 cut(s) | 289 |
| KroI | GCCGGC | 1 cut(s) | 149 |
| KroNI | GCCGGC | 1 cut(s) | 151 |
| Ksp22I | TGATCA | 3 cut(s) | 1612, 3307, 3459 |
| LguI | GCTCTTC | 2 cut(s) | 2264, 3041 |
| LmnI | GCTCC | 4 cut(s) | 896, 1577, 2128, 3272 |
| LweI | GCATC | 5 cut(s) | 325, 1112, 2450, 3421, 3642 |
| MabI | ACCWGGT | 1 cut(s) | 130 |
| MaeII | ACGT | 4 cut(s) | 351, 1160, 2046, 3528 |
| MflI | RGATCY | 4 cut(s) | 4, 2560, 2809, 2958 |
| MhlI | GDGCHC | 2 cut(s) | 1215, 1536 |
| MlsI | TGGCCA | 2 cut(s) | 38, 1955 |
| MluNI | TGGCCA | 2 cut(s) | 38, 1955 |
| MlyI | GAGTC | 5 cut(s) | 398, 458, 1040, 1368, 2732 |
| MmeI | TCCRAC | 8 cut(s) | 74, 93, 517, 1069, 1803, 2067, 3079, 3369 |
| Mox20I | TGGCCA | 2 cut(s) | 38, 1955 |
| MroNI | GCCGGC | 1 cut(s) | 149 |
| MroXI | GAANNNNTTC | 3 cut(s) | 117, 1479, 2632 |
| MscI | TGGCCA | 2 cut(s) | 38, 1955 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2795, 3467 |
| Msp20I | TGGCCA | 2 cut(s) | 38, 1955 |
| MspA1I | CMGCKG | 2 cut(s) | 752, 2824 |
| MspCI | CTTAAG | 2 cut(s) | 2086, 3230 |
| MspR9I | CCNGG | 8 cut(s) | 132, 831, 954, 1507, 1861, 2513, 2523, 2646 |
| Mva1269I | GAATGC | 1 cut(s) | 2640 |
| MvaI | CCWGG | 4 cut(s) | 132, 831, 954, 2646 |
| MvnI | CGCG | 3 cut(s) | 1549, 3244, 3623 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 295, 912, 1210, 1655, 2746, 3302, 3454 |
| NaeI | GCCGGC | 1 cut(s) | 151 |
| NciI | CCSGG | 4 cut(s) | 1507, 1861, 2513, 2523 |
| NdeI | CATATG | 1 cut(s) | 646 |
| NgoMIV | GCCGGC | 1 cut(s) | 149 |
| NlaIII | CATG | 8 cut(s) | 700, 855, 887, 1714, 2135, 2221, 2579, 3466 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmeAIII | GCCGAG | 1 cut(s) | 2372 |
| NmuCI | GTSAC | 3 cut(s) | 1961, 2539, 3397 |
| NspI | RCATGY | 1 cut(s) | 2135 |
| NspV | TTCGAA | 1 cut(s) | 3585 |
| PaeR7I | CTCGAG | 2 cut(s) | 1334, 2750 |
| PciSI | GCTCTTC | 2 cut(s) | 2264, 3041 |
| PctI | GAATGC | 1 cut(s) | 2640 |
| PdiI | GCCGGC | 1 cut(s) | 151 |
| PdmI | GAANNNNTTC | 3 cut(s) | 117, 1479, 2632 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1947, 1976, 2049 |
| PfoI | TCCNGGA | 1 cut(s) | 952 |
| PleI | GAGTC | 5 cut(s) | 398, 458, 1039, 1367, 2731 |
| PpsI | GAGTC | 5 cut(s) | 398, 458, 1039, 1367, 2731 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2034 |
| PsiI | TTATAA | 2 cut(s) | 1080, 1179 |
| Psp124BI | GAGCTC | 1 cut(s) | 1536 |
| Psp1406I | AACGTT | 1 cut(s) | 2046 |
| Psp6I | CCWGG | 4 cut(s) | 130, 829, 952, 2644 |
| PspEI | GGTNACC | 2 cut(s) | 3182, 3397 |
| PspFI | CCCAGC | 1 cut(s) | 654 |
| PspGI | CCWGG | 4 cut(s) | 130, 829, 952, 2644 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PspPI | GGNCC | 7 cut(s) | 357, 608, 633, 2052, 2361, 2514, 2588 |
| PspXI | VCTCGAGB | 1 cut(s) | 2750 |
| PstI | CTGCAG | 1 cut(s) | 914 |
| PstNI | CAGNNNCTG | 1 cut(s) | 909 |
| PsuI | RGATCY | 4 cut(s) | 4, 2560, 2809, 2958 |
| PvuII | CAGCTG | 2 cut(s) | 752, 2824 |
| RsaI | GTAC | 9 cut(s) | 102, 1088, 1157, 1456, 1687, 1700, 2765, 3179, 3368 |
| RsaNI | GTAC | 9 cut(s) | 101, 1087, 1156, 1455, 1686, 1699, 2764, 3178, 3367 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2795, 3467 |
| SacI | GAGCTC | 1 cut(s) | 1536 |
| SapI | GCTCTTC | 2 cut(s) | 2264, 3041 |
| Sau96I | GGNCC | 7 cut(s) | 357, 608, 633, 2052, 2361, 2514, 2588 |
| ScaI | AGTACT | 2 cut(s) | 1687, 1700 |
| SchI | GAGTC | 5 cut(s) | 398, 458, 1040, 1368, 2732 |
| ScrFI | CCNGG | 8 cut(s) | 132, 831, 954, 1507, 1861, 2513, 2523, 2646 |
| SduI | GDGCHC | 2 cut(s) | 1215, 1536 |
| SexAI | ACCWGGT | 1 cut(s) | 130 |
| SfaNI | GCATC | 5 cut(s) | 325, 1112, 2450, 3421, 3642 |
| SfcI | CTRYAG | 3 cut(s) | 246, 910, 1809 |
| Sfr274I | CTCGAG | 2 cut(s) | 1334, 2750 |
| SfuI | TTCGAA | 1 cut(s) | 3585 |
| SgrAI | CRCCGGYG | 1 cut(s) | 2077 |
| SinI | GGWCC | 4 cut(s) | 357, 2052, 2361, 2588 |
| SlaI | CTCGAG | 2 cut(s) | 1334, 2750 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2795, 3467 |
| SmlI | CTYRAG | 7 cut(s) | 1227, 1334, 1535, 2086, 2303, 2750, 3230 |
| SmoI | CTYRAG | 7 cut(s) | 1227, 1334, 1535, 2086, 2303, 2750, 3230 |
| SsiI | CCGC | 5 cut(s) | 147, 510, 1549, 1857, 3244 |
| SstI | GAGCTC | 1 cut(s) | 1536 |
| StyD4I | CCNGG | 8 cut(s) | 130, 829, 952, 1505, 1859, 2511, 2521, 2644 |
| StyI | CCWWGG | 4 cut(s) | 1254, 1300, 2401, 3349 |
| TaaI | ACNGT | 5 cut(s) | 1961, 2300, 2479, 2896, 3182 |
| TaiI | ACGT | 4 cut(s) | 354, 1163, 2049, 3531 |
| TatI | WGTACW | 6 cut(s) | 100, 1155, 1454, 1685, 1698, 3366 |
| TscAI | CASTG | 3 cut(s) | 1648, 2901, 3172 |
| TseFI | GTSAC | 3 cut(s) | 1961, 2539, 3397 |
| Tsp45I | GTSAC | 3 cut(s) | 1961, 2539, 3397 |
| TspDTI | ATGAA | 9 cut(s) | 45, 146, 840, 872, 1488, 2008, 2406, 2564, 3354 |
| TspGWI | ACGGA | 1 cut(s) | 2787 |
| TspRI | CASTG | 3 cut(s) | 1648, 2901, 3172 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1947, 1976, 2049 |
| Vha464I | CTTAAG | 2 cut(s) | 2086, 3230 |
| VpaK11BI | GGWCC | 4 cut(s) | 357, 2052, 2361, 2588 |
| XapI | RAATTY | 4 cut(s) | 888, 1376, 1667, 3071 |
| XceI | RCATGY | 1 cut(s) | 2135 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 837, 1948, 1973 |
| XhoI | CTCGAG | 2 cut(s) | 1334, 2750 |
| XmaJI | CCTAGG | 1 cut(s) | 2401 |
| XmiI | GTMKAC | 3 cut(s) | 627, 671, 3121 |
| XmnI | GAANNNNTTC | 3 cut(s) | 117, 1479, 2632 |
| ZraI | GACGTC | 1 cut(s) | 3529 |
| ZrmI | AGTACT | 2 cut(s) | 1687, 1700 |