RchiOBHm_Chr3g0464971

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000166
Physical Location & Seq
Reverse (-)
11901674 .. 11904067
2394 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43115

Sequence Viewer

Length: 2394 bp
ATGAAGTACAGAGCTTTTTCAGTCTCCTTTCTATGTCTTCTCTGTTTTGCAACTGCAAAAACCCTAGGTAGTCTAAAGAGAGGATCTTCTCTTTCAGTGGAGGATGATTCAGATTTCCTAACCTCACCAGACAAGTCTTTCACGTGTGGGTTTCATGGGGTTGGCACAAATGCCTACTGGTTCTCAATTTGGTTCACAAGCTCAAAAGACAGGACCATTGTTTGGATGGCCAACAGGGACAAGCCAGTCAATGGCTTGGGGTCTAGAGTCTATCTGAGCCGAGATGGCTCGATGGTCTTGACTGATGTAGATGGAGCCATCATCTGGAAGAGCAGCACCAACTCGAGTACCAGTACTGTTGCTGAAAGAGCTGAGCTTTTGGATTCTGGCAACCTTGTTCTGAAGGACCCCAGTGGTAAAATTCTATGGCAAAGCTTTGATTTTCCTACTGATACTTTGCTCCCAAACCAACGCTTTAGAAAGACCAATAAGTTGATTTCTAATTTGGGAAGAGGGGATTTTGGTACTGGCTATTTTAGTTTCTATTTTGATAATGATAATGTTTTGAAGTTGATGTATGATGGTCCTGATATTTCTAGCTTGTACTGGCCTGACCTTGATTATAGTGTGTTTCAGAATGGCAGAAATGCTTATAATAGTAGTAGAGTTGCAGTTTTAGATGAACTTGGTAGTTTTTCGTCTAGTGATGAACTGCAATTTAGTGCTTTTGACATGGGTTTGAGAGTGAAAAGGAGGTTGTCGATGGATTATGATGGAAATCTAAGACTTTATAGTCTTAATAGCTCAACAGGATTGTGGATAATCACATGGCAAGCGATGGTGGAGCTTTGTAAGGTTCATGGGATATGTGGGCAAAATGGGATTTGTATATATACACCAGGGCCAAAGTGTTCATGTCCTCCTGGCTATGAAGTAGCTGATCCAAGTAACTTAAACTTGGGCTGCAAGCGTAAGTTCAAGAAGCGTACATGCTCGAAGTCCCAAGAAGAGAAATTTGTGCAGATTCCGCAAGTAGATTTCTATGGATTTGATCTCAATTTCAGTAACACAGTTTCAATTGATGATTGCAGACAGCTCTGCTTGGGGGATTGCCGGTGTGAGGCATTTAGCTATAGGCTAAATGGGGAAGGGAGGTGTTACACCAAAAGTGCTCTTTTCAATGGCTACAAGTCTCCAGATTTTGTGGGCAGTATATACTTGAGAATGCCTGTGAGTGTGGAAGCACCATTACTAGTCACCAGGCTCAATGCCCTGGATTCATGTAAGAGTACTGAGGCCCAAAAAATGGGTTCTGCTTCAATGTATGACAATACTAGTAAAAGGGTAAGATGGGCATATCTGTATTGGTTTGCTACTGCAGCTGGTGCAGTTGAAATTCTCTTCATACTTTCAGGTTGGTGGTTACTTTTCAGAAGACATGGCGCTAGAGCTCCTATCGAAGATGGATATCATGTGATTTCGAGTCAATTTAGAATGTTTCGGTACGCTGAGCTCAAGAAGGCGACCAAAACATTCAAGGAAGAGCTGGGAAGAGGGGCTTCTGGGGCTGTGTTTAAGGGTGTTCTGGAAGATGAGAGAGTGGTTGCTGTGAAGAAATTGGCAGACATTTATCAAGGTGAAGATGTGTTTTGGGCGGAAGTAAGCATAATTGGTAAAATCAATCACATGAACCTAGTGAGAATATGGGGATTCTGTTCAGAAGATAAACACAGACTCCTGGTGTCTGAGTTTATTGAAAATGGATCACTAGACAAGCACTTGTTCCCCCCAAATTTTCTTGGATGGCAAGAAAGGTTTAAAGTTGCAATAGGGGTTGCAAAGGGTTTAGCCTATCTTCACCATGAGTGTCTAGAATGGGTTATACATTGTGATGTGAAGCCTGAAAATATACTCTTAGACAGTAACTTTGAGGCAAAGATTGCAGATTTCGGGCTAGCAAAGTTGACTCAGAGAGGCAGCCAGAGCTCTATGTTCTCAAAAGTTCGAGGAACAAAAGGGTATATGGCCCCGGAGTGGGCTCTAAACCTTCCAATCACTGCGAAAGTGGATGTTTACAGTTACGGAGTGGTGATTCTAGAGTTGGTGAAGGGCATTCGACTTTCGAATTGGGCATTGGAGGATAGCGAGGAGCAAGAGGCAGAGCTGACTAGGTGTGTGAGGATAGTGAAAAGGAAGATTCAATGTGGAGAAGATTCATGGATGGAGGATATGTTGGATCCAAGACTAAAAGGGCAGTTCAGCAGGAAACAAGCAGAAAAGATGGTTGAGATTGGTATTTCTTGTGTGGAAGAAGATAGGAGCAGAAGACCAACAATGGATTCAGTATTACAAGATTTGCTAGAATGTGAAGGTGAGTCCTATGTGCATCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

797

Amino Acids

90.12

Weight (kDa)

7.09

Isoelectric Point (pI)

34.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 162 1.6e-25 D-mannose binding lectin
S_locus_glycop PF00954 234 - 311 1e-09 S-locus glycoprotein domain
PAN_2 PF08276 331 - 389 1.3e-06 PAN-like domain
PAN_1 PF00024 338 - 390 8.9e-06 PAN domain
PK_Tyr_Ser-Thr PF07714 512 - 786 4.3e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 513 - 785 2.9e-51 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 654
AasI GACNNNNNNGTC 2 cut(s) 245, 792
AccB7I CCANNNNNTGG 4 cut(s) 222, 251, 324, 1306
AciI CCGC 2 cut(s) 1028, 1655
AclWI GGATC 5 cut(s) 91, 935, 1771, 2231, 2244
AcoI YGGCCR 1 cut(s) 228
AcsI RAATTY 4 cut(s) 420, 1013, 1395, 1792
AcuI CTGAAG 1 cut(s) 422
AcvI CACGTG 1 cut(s) 144
AfaI GTAC 8 cut(s) 8, 349, 355, 526, 605, 988, 1291, 1505
AfiI CCNNNNNNNGG 7 cut(s) 222, 251, 324, 1120, 1306, 2034, 2035
AflIII ACRYGT 1 cut(s) 143
AgsI TTSAA 9 cut(s) 568, 979, 1077, 1180, 1320, 1394, 1537, 1757, 2201
AhlI ACTAGT 2 cut(s) 1252, 1334
AjnI CCWGG 5 cut(s) 898, 922, 1259, 1272, 1737
AjuI GAANNNNNNNTTGG 4 cut(s) 2117, 2149, 2323, 2355
Alw21I GWGCWC 4 cut(s) 1174, 1453, 1515, 1988
Alw26I GTCTC 2 cut(s) 28, 1197
AlwI GGATC 5 cut(s) 91, 935, 1771, 2231, 2244
Ama87I CYCGRG 1 cut(s) 343
AoxI GGCC 5 cut(s) 228, 608, 902, 1296, 2025
ApeKI GCWGC 4 cut(s) 333, 963, 1379, 1977
ApoI RAATTY 4 cut(s) 420, 1013, 1395, 1792
ArsI GACNNNNNNTTYG 2 cut(s) 1910, 1942
AspA2I CCTAGG 1 cut(s) 64
AspLEI GCGC 1 cut(s) 1445
AspS9I GGNCC 6 cut(s) 213, 406, 584, 902, 1297, 2026
AsuC2I CCSGG 1 cut(s) 2030
AsuHPI GGTGA 7 cut(s) 117, 1249, 1649, 1850, 2101, 2116, 2384
AsuII TTCGAA 1 cut(s) 2123
AsuNHI GCTAGC 1 cut(s) 1954
AvaI CYCGRG 1 cut(s) 343
AvaII GGWCC 3 cut(s) 213, 406, 584
AvrII CCTAGG 1 cut(s) 64
BaeI ACNNNNGTAYC 2 cut(s) 331, 364
BalI TGGCCA 1 cut(s) 230
BamHI GGATCC 1 cut(s) 2236
BanII GRGCYC 4 cut(s) 1453, 1515, 1988, 2041
BarI GAAGNNNNNNTAC 2 cut(s) 1233, 1265
BbrPI CACGTG 1 cut(s) 144
BbsI GAAGAC 3 cut(s) 29, 1441, 2332
Bbv12I GWGCWC 4 cut(s) 1174, 1453, 1515, 1988
BbvI GCAGC 4 cut(s) 345, 950, 1391, 1989
BciT130I CCWGG 5 cut(s) 900, 924, 1261, 1274, 1739
BcnI CCSGG 1 cut(s) 2030
BcoDI GTCTC 2 cut(s) 28, 1197
BcuI ACTAGT 2 cut(s) 1252, 1334
BfmI CTRYAG 2 cut(s) 1132, 1377
BfoI RGCGCY 1 cut(s) 1446
BglI GCCNNNNNGGC 1 cut(s) 285
BisI GCNGC 4 cut(s) 334, 964, 1380, 1978
BlnI CCTAGG 1 cut(s) 64
BlpI GCTNAGC 2 cut(s) 372, 1509
BlsI GCNGC 4 cut(s) 335, 965, 1381, 1979
BmcAI AGTACT 2 cut(s) 355, 1291
Bme1390I CCNGG 6 cut(s) 900, 924, 1261, 1274, 1739, 2030
Bme18I GGWCC 3 cut(s) 213, 406, 584
BmeT110I CYCGRG 1 cut(s) 343
BmgT120I GGNCC 6 cut(s) 213, 406, 584, 902, 1297, 2026
BmiI GGNNCC 4 cut(s) 316, 408, 2028, 2238
BmrFI CCNGG 6 cut(s) 900, 924, 1261, 1274, 1739, 2030
BmrI ACTGGG 1 cut(s) 405
BmtI GCTAGC 1 cut(s) 1958
BmuI ACTGGG 1 cut(s) 405
BpiI GAAGAC 3 cut(s) 29, 1441, 2332
BpmI CTGGAG 1 cut(s) 1179
Bpu1102I GCTNAGC 2 cut(s) 372, 1509
Bpu14I TTCGAA 1 cut(s) 2123
BpuEI CTTGAG 2 cut(s) 1240, 1499
BpuMI CCSGG 1 cut(s) 2030
BsaAI YACGTR 1 cut(s) 144
BsaBI GATNNNNATC 2 cut(s) 777, 1467
BsaJI CCNNGG 4 cut(s) 64, 899, 1272, 2028
BsaXI ACNNNNNCTCC 4 cut(s) 1719, 1749, 2216, 2246
Bsc4I CCNNNNNNNGG 7 cut(s) 222, 251, 324, 1120, 1306, 2034, 2035
Bse118I RCCGGY 1 cut(s) 1113
Bse1I ACTGG 6 cut(s) 182, 245, 351, 411, 532, 611
Bse8I GATNNNNATC 2 cut(s) 777, 1467
BseBI CCWGG 5 cut(s) 900, 924, 1261, 1274, 1739
BseDI CCNNGG 4 cut(s) 64, 899, 1272, 2028
BseGI GGATG 5 cut(s) 109, 231, 1808, 2074, 2226
BseJI GATNNNNATC 2 cut(s) 777, 1467
BseLI CCNNNNNNNGG 7 cut(s) 222, 251, 324, 1120, 1306, 2034, 2035
BseMII CTCAG 6 cut(s) 266, 363, 1284, 1500, 1737, 1982
BseNI ACTGG 6 cut(s) 182, 245, 351, 411, 532, 611
BseRI GAGGAG 1 cut(s) 2162
BseXI GCAGC 4 cut(s) 345, 950, 1391, 1989
BseYI CCCAGC 1 cut(s) 1546
BsgI GTGCAG 2 cut(s) 1040, 1407
BshFI GGCC 5 cut(s) 230, 610, 904, 1298, 2027
BsiHKAI GWGCWC 4 cut(s) 1174, 1453, 1515, 1988
BsiHKCI CYCGRG 1 cut(s) 343
BsiSI CCGG 2 cut(s) 1114, 2030
BslFI GGGAC 2 cut(s) 251, 985
BslI CCNNNNNNNGG 7 cut(s) 222, 251, 324, 1120, 1306, 2034, 2035
BsmAI GTCTC 2 cut(s) 28, 1197
BsmFI GGGAC 2 cut(s) 251, 985
BsmI GAATGC 2 cut(s) 1230, 2112
BsnI GGCC 5 cut(s) 230, 610, 904, 1298, 2027
BsoBI CYCGRG 1 cut(s) 343
Bsp119I TTCGAA 1 cut(s) 2123
Bsp1286I GDGCHC 5 cut(s) 1174, 1453, 1515, 1988, 2041
Bsp143I GATC 5 cut(s) 83, 940, 1051, 1763, 2236
Bsp1720I GCTNAGC 2 cut(s) 372, 1509
BspACI CCGC 2 cut(s) 1028, 1655
BspANI GGCC 5 cut(s) 230, 610, 904, 1298, 2027
BspCNI CTCAG 6 cut(s) 267, 364, 1285, 1501, 1738, 1981
BspLI GGNNCC 4 cut(s) 316, 408, 2028, 2238
BspMAI CTGCAG 1 cut(s) 1381
BspOI GCTAGC 1 cut(s) 1958
BspPI GGATC 5 cut(s) 91, 935, 1771, 2231, 2244
BspQI GCTCTTC 2 cut(s) 323, 1536
BspT104I TTCGAA 1 cut(s) 2123
BsrFI RCCGGY 1 cut(s) 1113
BsrI ACTGG 6 cut(s) 182, 245, 351, 411, 532, 611
BssAI RCCGGY 1 cut(s) 1113
BssECI CCNNGG 4 cut(s) 64, 899, 1272, 2028
BssMI GATC 5 cut(s) 83, 940, 1051, 1763, 2236
BssT1I CCWWGG 1 cut(s) 64
Bst2UI CCWGG 5 cut(s) 900, 924, 1261, 1274, 1739
Bst4CI ACNGT 4 cut(s) 358, 1072, 1922, 2078
Bst6I CTCTTC 6 cut(s) 323, 505, 1002, 1406, 1536, 1546
BstAPI GCANNNNNTGC 2 cut(s) 1385, 1940
BstBAI YACGTR 1 cut(s) 144
BstBI TTCGAA 1 cut(s) 2123
BstC8I GCNNGC 3 cut(s) 834, 968, 1956
BstDEI CTNAG 8 cut(s) 275, 372, 782, 1293, 1509, 1746, 1915, 1968
BstF5I GGATG 5 cut(s) 109, 231, 1808, 2074, 2226
BstH2I RGCGCY 1 cut(s) 1446
BstHHI GCGC 1 cut(s) 1445
BstKTI GATC 5 cut(s) 86, 943, 1054, 1766, 2239
BstMAI GTCTC 2 cut(s) 28, 1197
BstMBI GATC 5 cut(s) 83, 940, 1051, 1763, 2236
BstMWI GCNNNNNNNGC 8 cut(s) 285, 368, 1027, 1379, 1385, 1565, 1940, 1983
BstNI CCWGG 5 cut(s) 900, 924, 1261, 1274, 1739
BstNSI RCATGY 1 cut(s) 993
BstSCI CCNGG 6 cut(s) 898, 922, 1259, 1272, 1737, 2028
BstSFI CTRYAG 2 cut(s) 1132, 1377
BstV1I GCAGC 4 cut(s) 345, 950, 1391, 1989
BstV2I GAAGAC 3 cut(s) 29, 1441, 2332
BstX2I RGATCY 2 cut(s) 83, 2236
BstYI RGATCY 2 cut(s) 83, 2236
BsuRI GGCC 5 cut(s) 230, 610, 904, 1298, 2027
BtgZI GCGATG 1 cut(s) 851
BtsCI GGATG 5 cut(s) 109, 231, 1808, 2074, 2226
BtsI GCAGTG 1 cut(s) 2055
BtsIMutI CAGTG 3 cut(s) 102, 418, 2055
Cac8I GCNNGC 3 cut(s) 834, 968, 1956
CfoI GCGC 1 cut(s) 1445
Cfr10I RCCGGY 1 cut(s) 1113
Cfr13I GGNCC 6 cut(s) 213, 406, 584, 902, 1297, 2026
Csp6I GTAC 8 cut(s) 7, 348, 354, 525, 604, 987, 1290, 1504
CviQI GTAC 8 cut(s) 7, 348, 354, 525, 604, 987, 1290, 1504
DdeI CTNAG 8 cut(s) 275, 372, 782, 1293, 1509, 1746, 1915, 1968
DpnI GATC 5 cut(s) 85, 942, 1053, 1765, 2238
DpnII GATC 5 cut(s) 83, 940, 1051, 1763, 2236
DraI TTTAAA 1 cut(s) 1819
DrdI GACNNNNNNGTC 2 cut(s) 245, 792
DseDI GACNNNNNNGTC 2 cut(s) 245, 792
EaeI YGGCCR 1 cut(s) 228
Eam1104I CTCTTC 6 cut(s) 323, 505, 1002, 1406, 1536, 1546
EarI CTCTTC 6 cut(s) 323, 505, 1002, 1406, 1536, 1546
EciI GGCGGA 1 cut(s) 1670
Ecl136II GAGCTC 3 cut(s) 1451, 1513, 1986
Eco130I CCWWGG 1 cut(s) 64
Eco24I GRGCYC 4 cut(s) 1453, 1515, 1988, 2041
Eco32I GATATC 1 cut(s) 1469
Eco47I GGWCC 3 cut(s) 213, 406, 584
Eco53kI GAGCTC 3 cut(s) 1451, 1513, 1986
Eco57I CTGAAG 1 cut(s) 422
Eco72I CACGTG 1 cut(s) 144
Eco88I CYCGRG 1 cut(s) 343
EcoICRI GAGCTC 3 cut(s) 1451, 1513, 1986
EcoO109I RGGNCCY 1 cut(s) 406
EcoRII CCWGG 5 cut(s) 898, 922, 1259, 1272, 1737
EcoRV GATATC 1 cut(s) 1469
EcoT14I CCWWGG 1 cut(s) 64
EcoT38I GRGCYC 4 cut(s) 1453, 1515, 1988, 2041
ErhI CCWWGG 1 cut(s) 64
FalI AAGNNNNNCTT 2 cut(s) 1543, 1575
FaqI GGGAC 2 cut(s) 251, 985
Fnu4HI GCNGC 4 cut(s) 334, 964, 1380, 1978
FokI GGATG 5 cut(s) 116, 238, 1815, 2081, 2233
FriOI GRGCYC 4 cut(s) 1453, 1515, 1988, 2041
Fsp4HI GCNGC 4 cut(s) 334, 964, 1380, 1978
GlaI GCGC 1 cut(s) 1444
GluI GCNGC 4 cut(s) 334, 964, 1380, 1978
GsaI CCCAGC 1 cut(s) 1550
GsuI CTGGAG 1 cut(s) 1179
HaeII RGCGCY 1 cut(s) 1446
HaeIII GGCC 5 cut(s) 230, 610, 904, 1298, 2027
HapII CCGG 2 cut(s) 1114, 2030
HhaI GCGC 1 cut(s) 1445
Hin6I GCGC 1 cut(s) 1443
HinP1I GCGC 1 cut(s) 1443
HincII GTYRAC 1 cut(s) 1965
HindII GTYRAC 1 cut(s) 1965
HindIII AAGCTT 1 cut(s) 433
HpaII CCGG 2 cut(s) 1114, 2030
HphI GGTGA 7 cut(s) 117, 1249, 1649, 1850, 2101, 2116, 2384
Hpy166II GTNNAC 3 cut(s) 195, 1965, 2074
Hpy188I TCNGA 8 cut(s) 112, 276, 402, 636, 1433, 1720, 1747, 1971
Hpy8I GTNNAC 3 cut(s) 195, 1965, 2074
HpyAV CCTTC 6 cut(s) 397, 1142, 1513, 2057, 2101, 2363
HpyCH4III ACNGT 4 cut(s) 358, 1072, 1922, 2078
HpyCH4IV ACGT 1 cut(s) 143
HpyF10VI GCNNNNNNNGC 8 cut(s) 285, 368, 1027, 1379, 1385, 1565, 1940, 1983
HpyF3I CTNAG 8 cut(s) 275, 372, 782, 1293, 1509, 1746, 1915, 1968
HpySE526I ACGT 1 cut(s) 143
HspAI GCGC 1 cut(s) 1443
Kzo9I GATC 5 cut(s) 83, 940, 1051, 1763, 2236
LguI GCTCTTC 2 cut(s) 323, 1536
LmnI GCTCC 6 cut(s) 314, 465, 844, 1456, 2149, 2319
Lsp1109I GCAGC 4 cut(s) 345, 950, 1391, 1989
MaeII ACGT 1 cut(s) 143
MaeIII GTNAC 7 cut(s) 947, 1064, 1157, 1255, 1422, 1922, 2078
MalI GATC 5 cut(s) 85, 942, 1053, 1765, 2238
MboI GATC 5 cut(s) 83, 940, 1051, 1763, 2236
MfeI CAATTG 1 cut(s) 1077
MflI RGATCY 2 cut(s) 83, 2236
MhlI GDGCHC 5 cut(s) 1174, 1453, 1515, 1988, 2041
MlsI TGGCCA 1 cut(s) 230
MluNI TGGCCA 1 cut(s) 230
MlyI GAGTC 5 cut(s) 276, 1492, 1728, 1960, 2384
MmeI TCCRAC 1 cut(s) 2214
Mox20I TGGCCA 1 cut(s) 230
MscI TGGCCA 1 cut(s) 230
MseI TTAA 4 cut(s) 798, 953, 1575, 1818
MslI CAYNNNNRTG 1 cut(s) 1890
Msp20I TGGCCA 1 cut(s) 230
MspA1I CMGCKG 1 cut(s) 1382
MspI CCGG 2 cut(s) 1114, 2030
MspR9I CCNGG 6 cut(s) 900, 924, 1261, 1274, 1739, 2030
MunI CAATTG 1 cut(s) 1077
Mva1269I GAATGC 2 cut(s) 1230, 2112
MvaI CCWGG 5 cut(s) 900, 924, 1261, 1274, 1739
MwoI GCNNNNNNNGC 8 cut(s) 285, 368, 1027, 1379, 1385, 1565, 1940, 1983
NciI CCSGG 1 cut(s) 2030
NdeII GATC 5 cut(s) 83, 940, 1051, 1763, 2236
NheI GCTAGC 1 cut(s) 1954
NlaIV GGNNCC 4 cut(s) 316, 408, 2028, 2238
NmeAIII GCCGAG 1 cut(s) 305
NmuCI GTSAC 1 cut(s) 1255
NspI RCATGY 1 cut(s) 993
NspV TTCGAA 1 cut(s) 2123
PaeR7I CTCGAG 1 cut(s) 343
PciSI GCTCTTC 2 cut(s) 323, 1536
PctI GAATGC 2 cut(s) 1230, 2112
PfeI GAWTC 9 cut(s) 107, 383, 1024, 1277, 1710, 2092, 2197, 2213, 2339
PflMI CCANNNNNTGG 4 cut(s) 222, 251, 324, 1306
PkrI GCNGC 4 cut(s) 335, 965, 1381, 1979
PleI GAGTC 5 cut(s) 275, 1491, 1728, 1960, 2383
PmaCI CACGTG 1 cut(s) 144
PmlI CACGTG 1 cut(s) 144
PpsI GAGTC 5 cut(s) 275, 1491, 1728, 1960, 2383
Ppu21I YACGTR 1 cut(s) 144
PpuMI RGGWCCY 1 cut(s) 406
PsiI TTATAA 1 cut(s) 654
Psp124BI GAGCTC 3 cut(s) 1453, 1515, 1988
Psp5II RGGWCCY 1 cut(s) 406
Psp6I CCWGG 5 cut(s) 898, 922, 1259, 1272, 1737
PspCI CACGTG 1 cut(s) 144
PspFI CCCAGC 1 cut(s) 1546
PspGI CCWGG 5 cut(s) 898, 922, 1259, 1272, 1737
PspN4I GGNNCC 4 cut(s) 316, 408, 2028, 2238
PspPI GGNCC 6 cut(s) 213, 406, 584, 902, 1297, 2026
PspPPI RGGWCCY 1 cut(s) 406
PspXI VCTCGAGB 1 cut(s) 343
PstI CTGCAG 1 cut(s) 1381
PsuI RGATCY 2 cut(s) 83, 2236
PvuII CAGCTG 1 cut(s) 1382
RsaI GTAC 8 cut(s) 8, 349, 355, 526, 605, 988, 1291, 1505
RsaNI GTAC 8 cut(s) 7, 348, 354, 525, 604, 987, 1290, 1504
RseI CAYNNNNRTG 1 cut(s) 1890
SacI GAGCTC 3 cut(s) 1453, 1515, 1988
SapI GCTCTTC 2 cut(s) 323, 1536
SaqAI TTAA 4 cut(s) 798, 953, 1575, 1818
SatI GCNGC 4 cut(s) 334, 964, 1380, 1978
Sau3AI GATC 5 cut(s) 83, 940, 1051, 1763, 2236
Sau96I GGNCC 6 cut(s) 213, 406, 584, 902, 1297, 2026
ScaI AGTACT 2 cut(s) 355, 1291
SchI GAGTC 5 cut(s) 276, 1492, 1728, 1960, 2384
ScrFI CCNGG 6 cut(s) 900, 924, 1261, 1274, 1739, 2030
SduI GDGCHC 5 cut(s) 1174, 1453, 1515, 1988, 2041
SfcI CTRYAG 2 cut(s) 1132, 1377
Sfr274I CTCGAG 1 cut(s) 343
SfuI TTCGAA 1 cut(s) 2123
SinI GGWCC 3 cut(s) 213, 406, 584
SlaI CTCGAG 1 cut(s) 343
SmiMI CAYNNNNRTG 1 cut(s) 1890
SmlI CTYRAG 3 cut(s) 343, 1219, 1514
SmoI CTYRAG 3 cut(s) 343, 1219, 1514
SpeI ACTAGT 2 cut(s) 1252, 1334
SsiI CCGC 2 cut(s) 1028, 1655
SstI GAGCTC 3 cut(s) 1453, 1515, 1988
StyD4I CCNGG 6 cut(s) 898, 922, 1259, 1272, 1737, 2028
StyI CCWWGG 1 cut(s) 64
TaaI ACNGT 4 cut(s) 358, 1072, 1922, 2078
TaiI ACGT 1 cut(s) 146
TaqI TCGA 9 cut(s) 290, 344, 761, 995, 1458, 1481, 2005, 2116, 2123
TatI WGTACW 4 cut(s) 6, 353, 603, 1289
TfiI GAWTC 9 cut(s) 107, 383, 1024, 1277, 1710, 2092, 2197, 2213, 2339
Tru1I TTAA 4 cut(s) 798, 953, 1575, 1818
Tru9I TTAA 4 cut(s) 798, 953, 1575, 1818
TscAI CASTG 3 cut(s) 102, 418, 2062
TseFI GTSAC 1 cut(s) 1255
TseI GCWGC 4 cut(s) 333, 963, 1379, 1977
Tsp45I GTSAC 1 cut(s) 1255
TspGWI ACGGA 1 cut(s) 2097
TspRI CASTG 3 cut(s) 102, 418, 2062
Van91I CCANNNNNTGG 4 cut(s) 222, 251, 324, 1306
VpaK11BI GGWCC 3 cut(s) 213, 406, 584
XapI RAATTY 4 cut(s) 420, 1013, 1395, 1792
XbaI TCTAGA 3 cut(s) 263, 1870, 2095
XceI RCATGY 1 cut(s) 993
XcmI CCANNNNNNNNNTGG 1 cut(s) 223
XhoI CTCGAG 1 cut(s) 343
XmaJI CCTAGG 1 cut(s) 64
ZrmI AGTACT 2 cut(s) 355, 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.