Rroxscaffold_6G00415330

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000166
Physical Location & Seq
Forward (+)
37534249 .. 37536570
2322 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00415330.1

Sequence Viewer

Length: 1827 bp
ATGAAGTACAGAGCTTTTTCAGTCACCTTTCTATGTCTTCTCTGTTTTGCAACTGCAAAAACCCTAAGTAGTCTAAGGAGAGGATCTTCTCTTTCAGTGGAGGATGATTCAGATTTCCTAACCTCACCAGACAAGTCTTTCACCTGTGGGTTTCATGGGGTTGGCACAAATGCCTACTGGTTCTCAATTTGGTTCACAAAATCAAAAGACAGGACCATTGTTTGGATGGCCAACAGGGACAAGCCAGTCAATGGCTTGGGGTCTAGAGTCTATCTGAGCCGAGATGGCTCGATGGTCTTGGCTGATGTAGATGGAGACATCATCTGGAAGAGCAGCACCAACTGGAGTACTAGTACTGTTGCTGAAAGAGCTGAGCTTTTGGATTCTAGCAACCTTGTTCTGAAGGACCCTAGTGGTAAAATTCTATGGCAAAGCTTTGATTTTCCTACTGACACTTTGCTCCCAAACCAACACTTTAGAAAGAGCAATAAGTTGATTTCTAATTTGGGAAGAGGGGATTTTGGTACTGGCTATTTTAGTTTCTATTTTGATAATGATAATGTTTTGAAGTTGATGTATGATGGTCCTGATATTTCAAGCTTGTACTGGCCTAACCTTGATAATAATGTGTTTCAGAATGGTAGAAATGCTTACAATAGTAGTAGAGTTGCTGTTTTAGATGAACTTGGTAGTTTTTCGTCTAGTGATGAACTGCAATTTAGTGCTTTTGACATGGGTTTGAGAGTGAAAAGGAGGTTGACAATGGATTATGATGGAAATCTAAGACTTTATAGTCTTAATAGCTCAACAGGATTGTGGATAATCACATGGCAAGCTATGGTGGAGCTTTGTAAGGTTCATGGGATATGTGGGAAAAATGGGATTTGTATATATACACCAGGGCCAAAGTGTTCATGTCCTCCTGGCTATGAAGTAGCTGATGCAAGTAACTGGAACTTGGGTTGCAAGCCTAAGTTCAAGCGTACATGCTCGAAGTCCCAAGAAGAGAAATTTGTGCAGATTCCGCAAGTAGATTTCTATGGATTTGATCTCAATTATACCATAAAAATTTCAATTGATGATTGCAGACAGCTCTGCTTGGGGGATTGCCGGTGTGAGGCATTTAGCTATAGGCTAAATGGGGAAGGGTGGTGTTTCACCAAAAGTGCTCTTTTCAATGGCTACAAGTCTCCAGATTTTGTGGGCAGTATATACTTGAGAATGCCTGTGAGTGTGGAAGCACCATTACTAGTCATCAGGCTCAATGCCCTGGATTCGTGTAAGAGTACTGAGGCCCAAAAATGGGGTTCTGCTTCAATGTATGACAATACTAGTAAAAGGGTAAGATGGACATATCTGTATTGGTTTGCTACTGCAGCTGGTGCAGTTGAAATTCTCTTCATATTTTCAGGTTGGTGGTTACTTTTCAGAAGACATGGCGCTAGAGCTCCTATCGAAGATGGATATCATGTGATTTCGAGTCAATTTAGAATGTTTCGGTACGCTGAGCTCAAGAAGGCGACCAAAACATTCATGGAAGAGCTGGGAAGAGGGGCTTCTGGGGCTGTGTTTAAGGGTGTTCTGGAAGATGAGAGAGTGGTTGCTGTGAAGAAATTGGCAGACATTTATCAAGGTGAAGATGTGTTTTGGGCTGAAGTAAGCATAATTGGTAAAATCAATCACATGAACCTAGTGAGAATATGGGGATTCTGTTCAGAAGATAAACACAGACTCCTGGTGTCTGAGTTTATTGAAAATGGATCACTAGACAAGCACTTGTTCCCCCAAATTTTCTTGGATGGCAAGAAAGGTTTAAAGTTGCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

608

Amino Acids

68.95

Weight (kDa)

8.41

Isoelectric Point (pI)

30.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 163 1.7e-23 D-mannose binding lectin
S_locus_glycop PF00954 234 - 311 4.5e-10 S-locus glycoprotein domain
PAN_2 PF08276 330 - 388 2e-06 PAN-like domain
PK_Tyr_Ser-Thr PF07714 511 - 593 2.8e-14 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 512 - 595 2.2e-13 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 245, 792
AccB7I CCANNNNNTGG 2 cut(s) 222, 251
AciI CCGC 1 cut(s) 1025
AclWI GGATC 2 cut(s) 91, 1768
AcoI YGGCCR 1 cut(s) 228
AcsI RAATTY 5 cut(s) 420, 1010, 1068, 1392, 1788
AcuI CTGAAG 2 cut(s) 422, 1674
AfaI GTAC 8 cut(s) 8, 349, 355, 526, 605, 985, 1288, 1502
AfiI CCNNNNNNNGG 5 cut(s) 222, 251, 1117, 1302, 1303
AgsI TTSAA 8 cut(s) 568, 597, 979, 1074, 1177, 1317, 1391, 1754
AhlI ACTAGT 3 cut(s) 350, 1249, 1331
AjnI CCWGG 4 cut(s) 898, 922, 1269, 1734
Alw21I GWGCWC 3 cut(s) 1171, 1450, 1512
Alw26I GTCTC 2 cut(s) 309, 1194
AlwI GGATC 2 cut(s) 91, 1768
AoxI GGCC 4 cut(s) 228, 608, 902, 1293
ApeKI GCWGC 2 cut(s) 333, 1376
ApoI RAATTY 5 cut(s) 420, 1010, 1068, 1392, 1788
AspLEI GCGC 1 cut(s) 1442
AspS9I GGNCC 5 cut(s) 213, 406, 584, 902, 1294
AsuHPI GGTGA 5 cut(s) 16, 117, 133, 1150, 1646
AvaII GGWCC 3 cut(s) 213, 406, 584
BalI TGGCCA 1 cut(s) 230
BanII GRGCYC 2 cut(s) 1450, 1512
BarI GAAGNNNNNNTAC 2 cut(s) 1230, 1262
BbsI GAAGAC 2 cut(s) 29, 1438
Bbv12I GWGCWC 3 cut(s) 1171, 1450, 1512
BbvI GCAGC 2 cut(s) 345, 1388
BccI CCATC 9 cut(s) 220, 278, 286, 305, 575, 767, 1341, 1454, 1793
BciT130I CCWGG 4 cut(s) 900, 924, 1271, 1736
BcoDI GTCTC 2 cut(s) 309, 1194
BcuI ACTAGT 3 cut(s) 350, 1249, 1331
BfmI CTRYAG 2 cut(s) 1129, 1374
BfoI RGCGCY 1 cut(s) 1443
BglI GCCNNNNNGGC 1 cut(s) 285
BisI GCNGC 2 cut(s) 334, 1377
BlpI GCTNAGC 2 cut(s) 372, 1506
BlsI GCNGC 2 cut(s) 335, 1378
BmcAI AGTACT 3 cut(s) 349, 355, 1288
Bme1390I CCNGG 4 cut(s) 900, 924, 1271, 1736
Bme18I GGWCC 3 cut(s) 213, 406, 584
BmgT120I GGNCC 5 cut(s) 213, 406, 584, 902, 1294
BmiI GGNNCC 1 cut(s) 408
BmrFI CCNGG 4 cut(s) 900, 924, 1271, 1736
BmsI GCATC 1 cut(s) 931
BpiI GAAGAC 2 cut(s) 29, 1438
BpmI CTGGAG 2 cut(s) 364, 1176
Bpu1102I GCTNAGC 2 cut(s) 372, 1506
BpuEI CTTGAG 2 cut(s) 1237, 1496
BsaBI GATNNNNATC 2 cut(s) 777, 1464
BsaJI CCNNGG 2 cut(s) 899, 1269
BsaXI ACNNNNNCTCC 4 cut(s) 337, 367, 1716, 1746
Bsc4I CCNNNNNNNGG 5 cut(s) 222, 251, 1117, 1302, 1303
Bse118I RCCGGY 1 cut(s) 1110
Bse1I ACTGG 6 cut(s) 182, 245, 347, 532, 611, 956
Bse8I GATNNNNATC 2 cut(s) 777, 1464
BseBI CCWGG 4 cut(s) 900, 924, 1271, 1736
BseDI CCNNGG 2 cut(s) 899, 1269
BseGI GGATG 3 cut(s) 109, 231, 1804
BseJI GATNNNNATC 2 cut(s) 777, 1464
BseLI CCNNNNNNNGG 5 cut(s) 222, 251, 1117, 1302, 1303
BseMII CTCAG 5 cut(s) 266, 363, 1281, 1497, 1734
BseNI ACTGG 6 cut(s) 182, 245, 347, 532, 611, 956
BseXI GCAGC 2 cut(s) 345, 1388
BseYI CCCAGC 1 cut(s) 1543
BsgI GTGCAG 2 cut(s) 1037, 1404
BshFI GGCC 4 cut(s) 230, 610, 904, 1295
BsiHKAI GWGCWC 3 cut(s) 1171, 1450, 1512
BsiSI CCGG 1 cut(s) 1111
BslFI GGGAC 2 cut(s) 251, 982
BslI CCNNNNNNNGG 5 cut(s) 222, 251, 1117, 1302, 1303
BsmAI GTCTC 2 cut(s) 309, 1194
BsmFI GGGAC 2 cut(s) 251, 982
BsmI GAATGC 1 cut(s) 1227
BsnI GGCC 4 cut(s) 230, 610, 904, 1295
Bsp1286I GDGCHC 3 cut(s) 1171, 1450, 1512
Bsp143I GATC 3 cut(s) 83, 1048, 1760
Bsp1720I GCTNAGC 2 cut(s) 372, 1506
BspACI CCGC 1 cut(s) 1025
BspANI GGCC 4 cut(s) 230, 610, 904, 1295
BspCNI CTCAG 5 cut(s) 267, 364, 1282, 1498, 1735
BspLI GGNNCC 1 cut(s) 408
BspMAI CTGCAG 1 cut(s) 1378
BspPI GGATC 2 cut(s) 91, 1768
BspQI GCTCTTC 2 cut(s) 323, 1533
BsrFI RCCGGY 1 cut(s) 1110
BsrI ACTGG 6 cut(s) 182, 245, 347, 532, 611, 956
BssAI RCCGGY 1 cut(s) 1110
BssECI CCNNGG 2 cut(s) 899, 1269
BssMI GATC 3 cut(s) 83, 1048, 1760
Bst2UI CCWGG 4 cut(s) 900, 924, 1271, 1736
Bst4CI ACNGT 1 cut(s) 358
Bst6I CTCTTC 6 cut(s) 323, 505, 999, 1403, 1533, 1543
BstAPI GCANNNNNTGC 1 cut(s) 1382
BstC8I GCNNGC 2 cut(s) 834, 968
BstDEI CTNAG 9 cut(s) 65, 74, 275, 372, 782, 972, 1290, 1506, 1743
BstF5I GGATG 3 cut(s) 109, 231, 1804
BstH2I RGCGCY 1 cut(s) 1443
BstHHI GCGC 1 cut(s) 1442
BstKTI GATC 3 cut(s) 86, 1051, 1763
BstMAI GTCTC 2 cut(s) 309, 1194
BstMBI GATC 3 cut(s) 83, 1048, 1760
BstMWI GCNNNNNNNGC 6 cut(s) 285, 368, 1024, 1376, 1382, 1562
BstNI CCWGG 4 cut(s) 900, 924, 1271, 1736
BstNSI RCATGY 1 cut(s) 990
BstSCI CCNGG 4 cut(s) 898, 922, 1269, 1734
BstSFI CTRYAG 2 cut(s) 1129, 1374
BstV1I GCAGC 2 cut(s) 345, 1388
BstV2I GAAGAC 2 cut(s) 29, 1438
BstX2I RGATCY 1 cut(s) 83
BstYI RGATCY 1 cut(s) 83
BsuRI GGCC 4 cut(s) 230, 610, 904, 1295
BtsCI GGATG 3 cut(s) 109, 231, 1804
BtsIMutI CAGTG 1 cut(s) 102
Cac8I GCNNGC 2 cut(s) 834, 968
CfoI GCGC 1 cut(s) 1442
Cfr10I RCCGGY 1 cut(s) 1110
Cfr13I GGNCC 5 cut(s) 213, 406, 584, 902, 1294
Csp6I GTAC 8 cut(s) 7, 348, 354, 525, 604, 984, 1287, 1501
CviQI GTAC 8 cut(s) 7, 348, 354, 525, 604, 984, 1287, 1501
DdeI CTNAG 9 cut(s) 65, 74, 275, 372, 782, 972, 1290, 1506, 1743
DpnI GATC 3 cut(s) 85, 1050, 1762
DpnII GATC 3 cut(s) 83, 1048, 1760
DraI TTTAAA 1 cut(s) 1815
DrdI GACNNNNNNGTC 2 cut(s) 245, 792
DseDI GACNNNNNNGTC 2 cut(s) 245, 792
EaeI YGGCCR 1 cut(s) 228
Eam1104I CTCTTC 6 cut(s) 323, 505, 999, 1403, 1533, 1543
EarI CTCTTC 6 cut(s) 323, 505, 999, 1403, 1533, 1543
Ecl136II GAGCTC 2 cut(s) 1448, 1510
Eco24I GRGCYC 2 cut(s) 1450, 1512
Eco32I GATATC 1 cut(s) 1466
Eco47I GGWCC 3 cut(s) 213, 406, 584
Eco53kI GAGCTC 2 cut(s) 1448, 1510
Eco57I CTGAAG 2 cut(s) 422, 1674
EcoICRI GAGCTC 2 cut(s) 1448, 1510
EcoO109I RGGNCCY 1 cut(s) 406
EcoRII CCWGG 4 cut(s) 898, 922, 1269, 1734
EcoRV GATATC 1 cut(s) 1466
EcoT38I GRGCYC 2 cut(s) 1450, 1512
FalI AAGNNNNNCTT 2 cut(s) 1540, 1572
FaqI GGGAC 2 cut(s) 251, 982
Fnu4HI GCNGC 2 cut(s) 334, 1377
FokI GGATG 3 cut(s) 116, 238, 1811
FriOI GRGCYC 2 cut(s) 1450, 1512
Fsp4HI GCNGC 2 cut(s) 334, 1377
GlaI GCGC 1 cut(s) 1441
GluI GCNGC 2 cut(s) 334, 1377
GsaI CCCAGC 1 cut(s) 1547
GsuI CTGGAG 2 cut(s) 364, 1176
HaeII RGCGCY 1 cut(s) 1443
HaeIII GGCC 4 cut(s) 230, 610, 904, 1295
HapII CCGG 1 cut(s) 1111
HhaI GCGC 1 cut(s) 1442
Hin6I GCGC 1 cut(s) 1440
HinP1I GCGC 1 cut(s) 1440
HincII GTYRAC 1 cut(s) 759
HindII GTYRAC 1 cut(s) 759
HindIII AAGCTT 2 cut(s) 433, 598
HinfI GANTC 8 cut(s) 107, 267, 383, 1021, 1274, 1480, 1707, 1731
HpaII CCGG 1 cut(s) 1111
HphI GGTGA 5 cut(s) 16, 117, 133, 1150, 1646
Hpy166II GTNNAC 2 cut(s) 195, 759
Hpy188I TCNGA 7 cut(s) 112, 276, 402, 636, 1430, 1717, 1744
Hpy188III TCNNGA 6 cut(s) 264, 325, 587, 1193, 1513, 1583
Hpy8I GTNNAC 2 cut(s) 195, 759
HpyAV CCTTC 3 cut(s) 397, 1139, 1510
HpyCH4III ACNGT 1 cut(s) 358
HpyF10VI GCNNNNNNNGC 6 cut(s) 285, 368, 1024, 1376, 1382, 1562
HpyF3I CTNAG 9 cut(s) 65, 74, 275, 372, 782, 972, 1290, 1506, 1743
HspAI GCGC 1 cut(s) 1440
Kzo9I GATC 3 cut(s) 83, 1048, 1760
LguI GCTCTTC 2 cut(s) 323, 1533
LmnI GCTCC 3 cut(s) 465, 844, 1453
Lsp1109I GCAGC 2 cut(s) 345, 1388
LweI GCATC 1 cut(s) 931
MaeIII GTNAC 3 cut(s) 22, 947, 1419
MalI GATC 3 cut(s) 85, 1050, 1762
MboI GATC 3 cut(s) 83, 1048, 1760
MfeI CAATTG 1 cut(s) 1074
MflI RGATCY 1 cut(s) 83
MhlI GDGCHC 3 cut(s) 1171, 1450, 1512
MlsI TGGCCA 1 cut(s) 230
MluNI TGGCCA 1 cut(s) 230
MlyI GAGTC 3 cut(s) 276, 1489, 1725
MnlI CCTC 9 cut(s) 74, 94, 133, 506, 747, 930, 1111, 1285, 1544
Mox20I TGGCCA 1 cut(s) 230
MscI TGGCCA 1 cut(s) 230
MseI TTAA 3 cut(s) 798, 1572, 1814
Msp20I TGGCCA 1 cut(s) 230
MspA1I CMGCKG 1 cut(s) 1379
MspI CCGG 1 cut(s) 1111
MspR9I CCNGG 4 cut(s) 900, 924, 1271, 1736
MunI CAATTG 1 cut(s) 1074
Mva1269I GAATGC 1 cut(s) 1227
MvaI CCWGG 4 cut(s) 900, 924, 1271, 1736
MwoI GCNNNNNNNGC 6 cut(s) 285, 368, 1024, 1376, 1382, 1562
NdeII GATC 3 cut(s) 83, 1048, 1760
NlaIV GGNNCC 1 cut(s) 408
NmeAIII GCCGAG 1 cut(s) 305
NmuCI GTSAC 1 cut(s) 22
NspI RCATGY 1 cut(s) 990
PciSI GCTCTTC 2 cut(s) 323, 1533
PctI GAATGC 1 cut(s) 1227
PfeI GAWTC 5 cut(s) 107, 383, 1021, 1274, 1707
PflMI CCANNNNNTGG 2 cut(s) 222, 251
PkrI GCNGC 2 cut(s) 335, 1378
PleI GAGTC 3 cut(s) 275, 1488, 1725
PpsI GAGTC 3 cut(s) 275, 1488, 1725
PpuMI RGGWCCY 1 cut(s) 406
Psp124BI GAGCTC 2 cut(s) 1450, 1512
Psp5II RGGWCCY 1 cut(s) 406
Psp6I CCWGG 4 cut(s) 898, 922, 1269, 1734
PspFI CCCAGC 1 cut(s) 1543
PspGI CCWGG 4 cut(s) 898, 922, 1269, 1734
PspN4I GGNNCC 1 cut(s) 408
PspPI GGNCC 5 cut(s) 213, 406, 584, 902, 1294
PspPPI RGGWCCY 1 cut(s) 406
PstI CTGCAG 1 cut(s) 1378
PsuI RGATCY 1 cut(s) 83
PvuII CAGCTG 1 cut(s) 1379
RsaI GTAC 8 cut(s) 8, 349, 355, 526, 605, 985, 1288, 1502
RsaNI GTAC 8 cut(s) 7, 348, 354, 525, 604, 984, 1287, 1501
SacI GAGCTC 2 cut(s) 1450, 1512
SapI GCTCTTC 2 cut(s) 323, 1533
SaqAI TTAA 3 cut(s) 798, 1572, 1814
SatI GCNGC 2 cut(s) 334, 1377
Sau3AI GATC 3 cut(s) 83, 1048, 1760
Sau96I GGNCC 5 cut(s) 213, 406, 584, 902, 1294
ScaI AGTACT 3 cut(s) 349, 355, 1288
SchI GAGTC 3 cut(s) 276, 1489, 1725
ScrFI CCNGG 4 cut(s) 900, 924, 1271, 1736
SduI GDGCHC 3 cut(s) 1171, 1450, 1512
SfaNI GCATC 1 cut(s) 931
SfcI CTRYAG 2 cut(s) 1129, 1374
SinI GGWCC 3 cut(s) 213, 406, 584
SmlI CTYRAG 2 cut(s) 1216, 1511
SmoI CTYRAG 2 cut(s) 1216, 1511
SpeI ACTAGT 3 cut(s) 350, 1249, 1331
SsiI CCGC 1 cut(s) 1025
SstI GAGCTC 2 cut(s) 1450, 1512
StyD4I CCNGG 4 cut(s) 898, 922, 1269, 1734
TaaI ACNGT 1 cut(s) 358
TaqI TCGA 4 cut(s) 290, 992, 1455, 1478
TatI WGTACW 5 cut(s) 6, 347, 353, 603, 1286
TfiI GAWTC 5 cut(s) 107, 383, 1021, 1274, 1707
Tru1I TTAA 3 cut(s) 798, 1572, 1814
Tru9I TTAA 3 cut(s) 798, 1572, 1814
TscAI CASTG 1 cut(s) 102
TseFI GTSAC 1 cut(s) 22
TseI GCWGC 2 cut(s) 333, 1376
Tsp45I GTSAC 1 cut(s) 22
TspRI CASTG 1 cut(s) 102
Van91I CCANNNNNTGG 2 cut(s) 222, 251
VpaK11BI GGWCC 3 cut(s) 213, 406, 584
XapI RAATTY 5 cut(s) 420, 1010, 1068, 1392, 1788
XbaI TCTAGA 1 cut(s) 263
XceI RCATGY 1 cut(s) 990
XcmI CCANNNNNNNNNTGG 2 cut(s) 223, 1531
ZrmI AGTACT 3 cut(s) 349, 355, 1288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.