Rh7DG150100

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000166
Physical Location & Seq
Forward (+)
12928664 .. 12931625
2962 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG150100.1

Sequence Viewer

Length: 2487 bp
ATGGCTTCTATATATAGTCCCTTTGTGTTCTTCAAGAATCACAAACAAAAAGTACTAAAAACTTCAAAAATGGGGTATGATCACCAAGCTATTTCATCCCCAAATTTCCCTTCTTTTCTTATTTTCTGTTTCATCACTGTGTTTTTCTACTCTTCTGCAACTGCAAAAAACCTCAACACATTACAAAGAGGCTCTTCTCTCTCAGTGAAAAATGATGTATCAGACTTCCTGACTTCCCCAGACAATTCTTTCACATGTGGGTTCTATGGTGTCGGCACCAATGCCTACTGGTTCTCCATCTGGTTCACCCACTCCAGGGACAGAACCGTAATTTGGATGGCCAACAGAAACCGACCCGTCAATGGCTTGGGCTCCAGAACCTCACTGACCCGAGATGGCTCAATGGTCTTGACAGATGTGGATGGCATACAAGTCTGGTCTCCCGACCTCAACTCTACTTCTGCCAACCTTGCTGAAAGAGCTGAGCTATTGAATTCTGGCAACCTTGTTTTGAGGGGCCCACAAGGTGAAATTCTATGGCAAAGCTTTGATTTTCCTACCAATACTCTTCTCCCTAACCAACTATTTACCAAGGGCATGAAGTTGGTCTCTAATTTGTTAGGGAGAGGTAACTTTGGTAGTGGATATTATAGTTTCTATTTTGATAATGACAATGTGTTGAGGCTCATGTATGATGGTCCTGACATTTCAAGTCTTTATTGGCCAAATCCTGGTTATAGTGTGTTTGACAATGGTAGAACAAATTATAACAGTAGCAGAATTGCTGTTTTTGATGATTTGGGTCGTTTTTTGTCCAGTGATCTATGGCGGTTTCGTGCAAGTGACATGGGTTTGGGGCCGAAAAGGCGGTTGACTATAGATTATGATGGGAATTTGAGACTTTATAGTCTCAATTCAACAGGGTTTTGGGCGGTGACTTGGGAAGCACTCATTCAGAGGTGTAGGGTTCATGGGATTTGTGGGAGAAATGGGATTTGTGTTTATACACCAGAGCCCAAATGTTCATGTCCTCCTGGCTATGAGGTGTTGGATAAAACTAACTGGAACAAAGGTTGCATCCCTAAGTTCAACCTTACATGCTCAGAGCCAGTGAAATTCCTTAAGATTCCAAATGTGGACTTTTTTGGATTTGACCTCAAATTCATGGAGTCCATTACCTTTAGCGCTTGCAGAAAACTCTGCGTAGATGATTGCCGGTGTCAAGCATTTCGTTACAAGCTAGCAGAAAAATCTACGACGACTCTGTGTTACACAAAAAATGCTCTTTTCAATGGGCACAAGTCTCCGTTTTACCCGGGCAGCTTATACTTCAAACTACCTCTTCATGTGGATACATCGCTACCTGCCAAGCTCAGTGTGACTGGTTCATGCATGAACAATGAGACCATGGCTGTGGTAGTAGGTTCTGCTTCAATGTATGACAAGAAAACTAAAAGGATGAGATGGGTGTATCTGTATTCTTTTGCTTCTGCAGTTGGTGTAGTTGAATTTTTTTTCATAGTATCAGGTTGGTGCTTACTTTTCCGAAGACGTGGCGCTGTAGCTCCCACCTTGCAAGATGACTTTCGTCGGATTTCAAGTCATTTCAGAATGTATCTCTCTTCCGAGCTCAAGAAGGCAACTCAAAACTTCAAGGAAGAGTTGGGAAGAGGGTCTTCTGGGGTTGTGTATAAGGGTGTTCTAGAAGACCAAAGAGTTGTAGCTGTCAAGAAATTGGGAGATATTTATCATGCAGAAGATGTGTTTTGGGCAGAAGTAACCACAATCGAAAAAATCCATCACATGAATCTAGTGAGAACATGGGGATTCTGTTCAGAAAATAAACATAGGCTCCTGATCACTGAGTACATCGAAAATGGATCGTTGGACAAGCATTTGTTCTCTCCAGGTTTTCTTGCATGGAAAGAAAGGTTGAAAGTTGCAATGGGGATAGCTAAAGGTTTAGCCTATCTTCACCATGAGTGTCTAGAGTGGGTTATACATTGTGATGTGAAGCCTGAAAATGTACTCCTAGACAGTGATTTTGAGCCAAAGATTGCGGATTTTGGGCTTGCAAAGTTATCTCAAAGAGGTGGCCGCGGTTCAGAGTTCTCTCAAATGAGAGGAACAAAGGGGTACATGGCTCCAGAGTGGGCTTCTAACCTTCCAATCACTGCAAAAGTTGATGTGTACAGTTATGGAGTGGTGATTCTAGAGATAGTGAAGGGCATTCGGCTTTCAAATTGGGTGACGGAAGATGATGAGGAGATAGAAACAGAGATGACAAGGTTTATCAGAGTAGCGAAGCATAGAATTCAAAGTGGAGAAGAGTCATGGATAGAGGATATGTTGGATCCAAGATTGGATGGTGAATACAACAGGAACCAAGCAGCAAAGATGATTAAGATTGGTATTTCCTGCGTGGAGGAAGATCGGTCTAAAAGACCAACAATGGATGCAATAGTACAAATGTTGCTAGAATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

828

Amino Acids

94.18

Weight (kDa)

8.65

Isoelectric Point (pI)

35.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 109 - 196 8.2e-21 D-mannose binding lectin
S_locus_glycop PF00954 289 - 348 6.7e-09 S-locus glycoprotein domain
Pkinase PF00069 551 - 824 2.3e-51 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 551 - 825 3.1e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 768
AasI GACNNNNNNGTC 1 cut(s) 906
Acc36I ACCTGC 1 cut(s) 1372
AccB1I GGYRCC 1 cut(s) 275
AccB7I CCANNNNNTGG 1 cut(s) 731
AccII CGCG 1 cut(s) 2100
AciI CCGC 6 cut(s) 829, 868, 932, 2060, 2098, 2100
AclWI GGATC 3 cut(s) 1888, 2348, 2361
AcoI YGGCCR 3 cut(s) 339, 722, 2095
AcsI RAATTY 8 cut(s) 103, 493, 531, 892, 1115, 1160, 1508, 2313
AdeI CACNNNGTG 1 cut(s) 527
AfaI GTAC 6 cut(s) 54, 1868, 2028, 2138, 2192, 2466
AfeI AGCGCT 1 cut(s) 1186
AfiI CCNNNNNNNGG 5 cut(s) 315, 316, 333, 362, 731
AflII CTTAAG 1 cut(s) 1121
AflIII ACRYGT 1 cut(s) 254
AjiI CACGTC 1 cut(s) 1553
AjnI CCWGG 4 cut(s) 314, 730, 1033, 1906
AjuI GAANNNNNNNTTGG 4 cut(s) 94, 126, 316, 348
Alw21I GWGCWC 1 cut(s) 1632
Alw26I GTCTC 6 cut(s) 444, 613, 892, 914, 1308, 1397
AlwI GGATC 3 cut(s) 1888, 2348, 2361
Ama87I CYCGRG 2 cut(s) 390, 1315
Aor51HI AGCGCT 1 cut(s) 1186
AoxI GGCC 5 cut(s) 339, 517, 722, 857, 2095
ApaI GGGCCC 1 cut(s) 521
ApeKI GCWGC 2 cut(s) 1320, 2390
ApoI RAATTY 8 cut(s) 103, 493, 531, 892, 1115, 1160, 1508, 2313
ArsI GACNNNNNNTTYG 2 cut(s) 2027, 2059
AspLEI GCGC 2 cut(s) 1187, 1559
AspS9I GGNCC 4 cut(s) 517, 518, 698, 857
AsuC2I CCSGG 2 cut(s) 1316, 1317
AsuHPI GGTGA 8 cut(s) 74, 298, 539, 946, 1967, 2218, 2260, 2381
AsuNHI GCTAGC 1 cut(s) 1240
AvaI CYCGRG 2 cut(s) 390, 1315
AvaII GGWCC 1 cut(s) 698
BaeGI GKGCMC 2 cut(s) 521, 1299
BalI TGGCCA 2 cut(s) 341, 724
BamHI GGATCC 1 cut(s) 2353
BanI GGYRCC 1 cut(s) 275
BanII GRGCYC 4 cut(s) 374, 521, 1017, 1632
BbsI GAAGAC 3 cut(s) 1555, 1668, 1713
Bbv12I GWGCWC 1 cut(s) 1632
BbvI GCAGC 2 cut(s) 1332, 2402
BccI CCATC 9 cut(s) 305, 331, 389, 416, 689, 881, 1458, 1806, 2360
BciT130I CCWGG 4 cut(s) 316, 732, 1035, 1908
BciVI GTATCC 1 cut(s) 1345
BclI TGATCA 2 cut(s) 79, 1857
BcnI CCSGG 2 cut(s) 1316, 1317
BcoDI GTCTC 6 cut(s) 444, 613, 892, 914, 1308, 1397
BfaI CTAG 7 cut(s) 1241, 1703, 1811, 1988, 2033, 2213, 2477
BfmI CTRYAG 3 cut(s) 876, 1491, 1560
BfoI RGCGCY 2 cut(s) 1188, 1560
BfrI CTTAAG 1 cut(s) 1121
BfuAI ACCTGC 1 cut(s) 1372
BfuI GTATCC 1 cut(s) 1345
BglI GCCNNNNNGGC 1 cut(s) 865
BisI GCNGC 3 cut(s) 1321, 2098, 2391
BlpI GCTNAGC 1 cut(s) 483
BlsI GCNGC 3 cut(s) 1322, 2099, 2392
BmcAI AGTACT 1 cut(s) 54
Bme1390I CCNGG 6 cut(s) 316, 732, 1035, 1316, 1317, 1908
Bme18I GGWCC 1 cut(s) 698
BmeT110I CYCGRG 2 cut(s) 390, 1315
BmgBI CACGTC 1 cut(s) 1553
BmgT120I GGNCC 4 cut(s) 517, 518, 698, 857
BmiI GGNNCC 9 cut(s) 277, 373, 518, 519, 858, 1853, 2145, 2355, 2384
BmrFI CCNGG 6 cut(s) 316, 732, 1035, 1316, 1317, 1908
BmsI GCATC 2 cut(s) 1086, 2446
BmtI GCTAGC 1 cut(s) 1244
BoxI GACNNNNGTC 1 cut(s) 1587
BpiI GAAGAC 3 cut(s) 1555, 1668, 1713
BpmI CTGGAG 4 cut(s) 298, 358, 1890, 2130
Bpu1102I GCTNAGC 1 cut(s) 483
BpuEI CTTGAG 1 cut(s) 1616
BpuMI CCSGG 2 cut(s) 1316, 1317
BsaBI GATNNNNATC 1 cut(s) 1746
BsaI GGTCTC 3 cut(s) 444, 613, 1397
BsaJI CCNNGG 5 cut(s) 315, 591, 1315, 1407, 2098
BsaXI ACNNNNNCTCC 4 cut(s) 278, 308, 1836, 1866
Bsc4I CCNNNNNNNGG 5 cut(s) 315, 316, 333, 362, 731
Bse118I RCCGGY 1 cut(s) 1215
Bse1I ACTGG 5 cut(s) 293, 816, 1067, 1109, 1387
Bse3DI GCAATG 1 cut(s) 1950
Bse8I GATNNNNATC 1 cut(s) 1746
BseBI CCWGG 4 cut(s) 316, 732, 1035, 1908
BseDI CCNNGG 5 cut(s) 315, 591, 1315, 1407, 2098
BseGI GGATG 7 cut(s) 95, 342, 427, 1077, 1464, 2371, 2461
BseJI GATNNNNATC 1 cut(s) 1746
BseLI CCNNNNNNNGG 5 cut(s) 315, 316, 333, 362, 731
BseMI GCAATG 1 cut(s) 1950
BseMII CTCAG 5 cut(s) 216, 474, 1116, 1387, 1854
BseNI ACTGG 5 cut(s) 293, 816, 1067, 1109, 1387
BseRI GAGGAG 1 cut(s) 2279
BseSI GKGCMC 2 cut(s) 521, 1299
BseXI GCAGC 2 cut(s) 1332, 2402
Bsh1236I CGCG 1 cut(s) 2100
BshFI GGCC 5 cut(s) 341, 519, 724, 859, 2097
BshNI GGYRCC 1 cut(s) 275
BsiHKAI GWGCWC 1 cut(s) 1632
BsiHKCI CYCGRG 2 cut(s) 390, 1315
BsiSI CCGG 2 cut(s) 1216, 1316
BslFI GGGAC 2 cut(s) 3, 332
BslI CCNNNNNNNGG 5 cut(s) 315, 316, 333, 362, 731
BsmAI GTCTC 6 cut(s) 444, 613, 892, 914, 1308, 1397
BsmFI GGGAC 2 cut(s) 3, 332
BsmI GAATGC 1 cut(s) 2229
BsnI GGCC 5 cut(s) 341, 519, 724, 859, 2097
Bso31I GGTCTC 3 cut(s) 444, 613, 1397
BsoBI CYCGRG 2 cut(s) 390, 1315
Bsp120I GGGCCC 1 cut(s) 517
Bsp1286I GDGCHC 5 cut(s) 374, 521, 1017, 1299, 1632
Bsp1407I TGTACA 1 cut(s) 2190
Bsp143I GATC 6 cut(s) 79, 820, 1857, 1880, 2353, 2431
Bsp1720I GCTNAGC 1 cut(s) 483
Bsp19I CCATGG 1 cut(s) 1407
BspACI CCGC 6 cut(s) 829, 868, 932, 2060, 2098, 2100
BspANI GGCC 5 cut(s) 341, 519, 724, 859, 2097
BspCNI CTCAG 5 cut(s) 215, 475, 1115, 1386, 1855
BspFNI CGCG 1 cut(s) 2100
BspLI GGNNCC 9 cut(s) 277, 373, 518, 519, 858, 1853, 2145, 2355, 2384
BspMAI CTGCAG 1 cut(s) 1495
BspMI ACCTGC 1 cut(s) 1372
BspOI GCTAGC 1 cut(s) 1244
BspPI GGATC 3 cut(s) 1888, 2348, 2361
BspQI GCTCTTC 1 cut(s) 199
BspT107I GGYRCC 1 cut(s) 275
BspTI CTTAAG 1 cut(s) 1121
BspTNI GGTCTC 3 cut(s) 444, 613, 1397
BsrDI GCAATG 1 cut(s) 1950
BsrFI RCCGGY 1 cut(s) 1215
BsrGI TGTACA 1 cut(s) 2190
BsrI ACTGG 5 cut(s) 293, 816, 1067, 1109, 1387
BssAI RCCGGY 1 cut(s) 1215
BssECI CCNNGG 5 cut(s) 315, 591, 1315, 1407, 2098
BssMI GATC 6 cut(s) 79, 820, 1857, 1880, 2353, 2431
BssT1I CCWWGG 2 cut(s) 591, 1407
Bst2UI CCWGG 4 cut(s) 316, 732, 1035, 1908
Bst4CI ACNGT 5 cut(s) 139, 328, 773, 2039, 2195
Bst6I CTCTTC 8 cut(s) 157, 199, 573, 1347, 1627, 1653, 1663, 2322
BstAFI CTTAAG 1 cut(s) 1121
BstAUI TGTACA 1 cut(s) 2190
BstC8I GCNNGC 3 cut(s) 1189, 1242, 2073
BstDEI CTNAG 6 cut(s) 202, 483, 1083, 1102, 1373, 1863
BstDSI CCRYGG 2 cut(s) 1407, 2098
BstF5I GGATG 7 cut(s) 95, 342, 427, 1077, 1464, 2371, 2461
BstFNI CGCG 1 cut(s) 2100
BstH2I RGCGCY 2 cut(s) 1188, 1560
BstHHI GCGC 2 cut(s) 1187, 1559
BstKTI GATC 6 cut(s) 82, 823, 1860, 1883, 2356, 2434
BstMAI GTCTC 6 cut(s) 444, 613, 892, 914, 1308, 1397
BstMBI GATC 6 cut(s) 79, 820, 1857, 1880, 2353, 2431
BstMWI GCNNNNNNNGC 3 cut(s) 470, 479, 865
BstNI CCWGG 4 cut(s) 316, 732, 1035, 1908
BstNSI RCATGY 2 cut(s) 258, 1101
BstPAI GACNNNNGTC 1 cut(s) 1587
BstSCI CCNGG 6 cut(s) 314, 730, 1033, 1314, 1315, 1906
BstSFI CTRYAG 3 cut(s) 876, 1491, 1560
BstSLI GKGCMC 2 cut(s) 521, 1299
BstUI CGCG 1 cut(s) 2100
BstV1I GCAGC 2 cut(s) 1332, 2402
BstV2I GAAGAC 3 cut(s) 1555, 1668, 1713
BstX2I RGATCY 1 cut(s) 2353
BstXI CCANNNNNNTGG 1 cut(s) 1414
BstYI RGATCY 1 cut(s) 2353
BsuI GTATCC 1 cut(s) 1345
BsuRI GGCC 5 cut(s) 341, 519, 724, 859, 2097
BtgI CCRYGG 2 cut(s) 1407, 2098
BtgZI GCGATG 1 cut(s) 1341
BtrI CACGTC 1 cut(s) 1553
BtsCI GGATG 7 cut(s) 95, 342, 427, 1077, 1464, 2371, 2461
BtsI GCAGTG 1 cut(s) 2172
BtsIMutI CAGTG 9 cut(s) 135, 210, 383, 823, 1116, 1381, 1860, 2044, 2172
BveI ACCTGC 1 cut(s) 1372
Cac8I GCNNGC 3 cut(s) 1189, 1242, 2073
CfoI GCGC 2 cut(s) 1187, 1559
Cfr10I RCCGGY 1 cut(s) 1215
Cfr13I GGNCC 4 cut(s) 517, 518, 698, 857
Cfr42I CCGCGG 1 cut(s) 2101
Cfr9I CCCGGG 1 cut(s) 1315
Csp6I GTAC 6 cut(s) 53, 1867, 2027, 2137, 2191, 2465
CviQI GTAC 6 cut(s) 53, 1867, 2027, 2137, 2191, 2465
DdeI CTNAG 6 cut(s) 202, 483, 1083, 1102, 1373, 1863
DpnI GATC 6 cut(s) 81, 822, 1859, 1882, 2355, 2433
DpnII GATC 6 cut(s) 79, 820, 1857, 1880, 2353, 2431
DraIII CACNNNGTG 1 cut(s) 527
DrdI GACNNNNNNGTC 1 cut(s) 906
DseDI GACNNNNNNGTC 1 cut(s) 906
EaeI YGGCCR 3 cut(s) 339, 722, 2095
Eam1104I CTCTTC 8 cut(s) 157, 199, 573, 1347, 1627, 1653, 1663, 2322
EarI CTCTTC 8 cut(s) 157, 199, 573, 1347, 1627, 1653, 1663, 2322
Ecl136II GAGCTC 1 cut(s) 1630
Eco130I CCWWGG 2 cut(s) 591, 1407
Eco24I GRGCYC 4 cut(s) 374, 521, 1017, 1632
Eco31I GGTCTC 3 cut(s) 444, 613, 1397
Eco47I GGWCC 1 cut(s) 698
Eco47III AGCGCT 1 cut(s) 1186
Eco53kI GAGCTC 1 cut(s) 1630
Eco88I CYCGRG 2 cut(s) 390, 1315
EcoICRI GAGCTC 1 cut(s) 1630
EcoO109I RGGNCCY 1 cut(s) 517
EcoRI GAATTC 2 cut(s) 493, 2313
EcoRII CCWGG 4 cut(s) 314, 730, 1033, 1906
EcoT14I CCWWGG 2 cut(s) 591, 1407
EcoT22I ATGCAT 1 cut(s) 1394
EcoT38I GRGCYC 4 cut(s) 374, 521, 1017, 1632
ErhI CCWWGG 2 cut(s) 591, 1407
FalI AAGNNNNNCTT 4 cut(s) 178, 210, 1660, 1692
FaqI GGGAC 2 cut(s) 3, 332
FbaI TGATCA 2 cut(s) 79, 1857
Fnu4HI GCNGC 3 cut(s) 1321, 2098, 2391
FokI GGATG 7 cut(s) 82, 349, 434, 1064, 1471, 2378, 2468
FriOI GRGCYC 4 cut(s) 374, 521, 1017, 1632
Fsp4HI GCNGC 3 cut(s) 1321, 2098, 2391
FspBI CTAG 7 cut(s) 1241, 1703, 1811, 1988, 2033, 2213, 2477
GlaI GCGC 2 cut(s) 1186, 1558
GluI GCNGC 3 cut(s) 1321, 2098, 2391
GsuI CTGGAG 4 cut(s) 298, 358, 1890, 2130
HaeII RGCGCY 2 cut(s) 1188, 1560
HaeIII GGCC 5 cut(s) 341, 519, 724, 859, 2097
HapII CCGG 2 cut(s) 1216, 1316
HhaI GCGC 2 cut(s) 1187, 1559
Hin6I GCGC 2 cut(s) 1185, 1557
HinP1I GCGC 2 cut(s) 1185, 1557
HincII GTYRAC 1 cut(s) 873
HindII GTYRAC 1 cut(s) 873
HindIII AAGCTT 1 cut(s) 544
HinfI GANTC 8 cut(s) 37, 1126, 1169, 1261, 1807, 1827, 2209, 2330
HpaII CCGG 2 cut(s) 1216, 1316
HphI GGTGA 8 cut(s) 74, 298, 539, 946, 1967, 2218, 2260, 2381
Hpy166II GTNNAC 4 cut(s) 306, 873, 1138, 2191
Hpy8I GTNNAC 4 cut(s) 306, 873, 1138, 2191
Hpy99I CGWCG 2 cut(s) 1261, 1593
HpyAV CCTTC 4 cut(s) 120, 1630, 2174, 2218
HpyCH4III ACNGT 5 cut(s) 139, 328, 773, 2039, 2195
HpyCH4IV ACGT 1 cut(s) 1552
HpyF10VI GCNNNNNNNGC 3 cut(s) 470, 479, 865
HpyF3I CTNAG 6 cut(s) 202, 483, 1083, 1102, 1373, 1863
HpySE526I ACGT 1 cut(s) 1552
HspAI GCGC 2 cut(s) 1185, 1557
Ksp22I TGATCA 2 cut(s) 79, 1857
KspI CCGCGG 1 cut(s) 2101
Kzo9I GATC 6 cut(s) 79, 820, 1857, 1880, 2353, 2431
LguI GCTCTTC 1 cut(s) 199
LmnI GCTCC 4 cut(s) 377, 1570, 1857, 2149
Lsp1109I GCAGC 2 cut(s) 1332, 2402
LweI GCATC 2 cut(s) 1086, 2446
MaeI CTAG 7 cut(s) 1241, 1703, 1811, 1988, 2033, 2213, 2477
MaeII ACGT 1 cut(s) 1552
MaeIII GTNAC 8 cut(s) 629, 842, 934, 1232, 1268, 1378, 1777, 2248
MalI GATC 6 cut(s) 81, 822, 1859, 1882, 2355, 2433
MboI GATC 6 cut(s) 79, 820, 1857, 1880, 2353, 2431
MflI RGATCY 1 cut(s) 2353
MhlI GDGCHC 5 cut(s) 374, 521, 1017, 1299, 1632
MlsI TGGCCA 2 cut(s) 341, 724
MluNI TGGCCA 2 cut(s) 341, 724
MlyI GAGTC 3 cut(s) 1178, 1255, 2339
MmeI TCCRAC 4 cut(s) 1029, 1571, 1866, 2331
Mox20I TGGCCA 2 cut(s) 341, 724
Mph1103I ATGCAT 1 cut(s) 1394
MscI TGGCCA 2 cut(s) 341, 724
MseI TTAA 3 cut(s) 1122, 2403, 2485
MslI CAYNNNNRTG 3 cut(s) 137, 1412, 2007
Msp20I TGGCCA 2 cut(s) 341, 724
MspA1I CMGCKG 1 cut(s) 2100
MspCI CTTAAG 1 cut(s) 1121
MspI CCGG 2 cut(s) 1216, 1316
MspR9I CCNGG 6 cut(s) 316, 732, 1035, 1316, 1317, 1908
Mva1269I GAATGC 1 cut(s) 2229
MvaI CCWGG 4 cut(s) 316, 732, 1035, 1908
MvnI CGCG 1 cut(s) 2100
MwoI GCNNNNNNNGC 3 cut(s) 470, 479, 865
NciI CCSGG 2 cut(s) 1316, 1317
NcoI CCATGG 1 cut(s) 1407
NdeII GATC 6 cut(s) 79, 820, 1857, 1880, 2353, 2431
NheI GCTAGC 1 cut(s) 1240
NlaIV GGNNCC 9 cut(s) 277, 373, 518, 519, 858, 1853, 2145, 2355, 2384
NmuCI GTSAC 4 cut(s) 842, 934, 1378, 2248
NsiI ATGCAT 1 cut(s) 1394
NspI RCATGY 2 cut(s) 258, 1101
PciI ACATGT 1 cut(s) 254
PciSI GCTCTTC 1 cut(s) 199
PctI GAATGC 1 cut(s) 2229
PfeI GAWTC 5 cut(s) 37, 1126, 1807, 1827, 2209
PflMI CCANNNNNTGG 1 cut(s) 731
PkrI GCNGC 3 cut(s) 1322, 2099, 2392
PleI GAGTC 3 cut(s) 1177, 1255, 2338
PpsI GAGTC 3 cut(s) 1177, 1255, 2338
PscI ACATGT 1 cut(s) 254
PshAI GACNNNNGTC 1 cut(s) 1587
PsiI TTATAA 1 cut(s) 768
Psp124BI GAGCTC 1 cut(s) 1632
Psp6I CCWGG 4 cut(s) 314, 730, 1033, 1906
PspGI CCWGG 4 cut(s) 314, 730, 1033, 1906
PspN4I GGNNCC 9 cut(s) 277, 373, 518, 519, 858, 1853, 2145, 2355, 2384
PspOMI GGGCCC 1 cut(s) 517
PspPI GGNCC 4 cut(s) 517, 518, 698, 857
PstI CTGCAG 1 cut(s) 1495
PsuI RGATCY 1 cut(s) 2353
RsaI GTAC 6 cut(s) 54, 1868, 2028, 2138, 2192, 2466
RsaNI GTAC 6 cut(s) 53, 1867, 2027, 2137, 2191, 2465
RseI CAYNNNNRTG 3 cut(s) 137, 1412, 2007
SacI GAGCTC 1 cut(s) 1632
SacII CCGCGG 1 cut(s) 2101
SapI GCTCTTC 1 cut(s) 199
SaqAI TTAA 3 cut(s) 1122, 2403, 2485
SatI GCNGC 3 cut(s) 1321, 2098, 2391
Sau3AI GATC 6 cut(s) 79, 820, 1857, 1880, 2353, 2431
Sau96I GGNCC 4 cut(s) 517, 518, 698, 857
ScaI AGTACT 1 cut(s) 54
SchI GAGTC 3 cut(s) 1178, 1255, 2339
ScrFI CCNGG 6 cut(s) 316, 732, 1035, 1316, 1317, 1908
SduI GDGCHC 5 cut(s) 374, 521, 1017, 1299, 1632
SfaNI GCATC 2 cut(s) 1086, 2446
SfcI CTRYAG 3 cut(s) 876, 1491, 1560
Sfr303I CCGCGG 1 cut(s) 2101
SgrBI CCGCGG 1 cut(s) 2101
SinI GGWCC 1 cut(s) 698
SmaI CCCGGG 1 cut(s) 1317
SmiMI CAYNNNNRTG 3 cut(s) 137, 1412, 2007
SmlI CTYRAG 2 cut(s) 1121, 1631
SmoI CTYRAG 2 cut(s) 1121, 1631
SsiI CCGC 6 cut(s) 829, 868, 932, 2060, 2098, 2100
SspMI CTAG 7 cut(s) 1241, 1703, 1811, 1988, 2033, 2213, 2477
SstI GAGCTC 1 cut(s) 1632
StyD4I CCNGG 6 cut(s) 314, 730, 1033, 1314, 1315, 1906
StyI CCWWGG 2 cut(s) 591, 1407
TaaI ACNGT 5 cut(s) 139, 328, 773, 2039, 2195
TaiI ACGT 1 cut(s) 1555
TaqI TCGA 2 cut(s) 1788, 1872
TaqII GACCGA 1 cut(s) 2424
TatI WGTACW 5 cut(s) 52, 1866, 2026, 2190, 2464
TauI GCSGC 1 cut(s) 2100
TfiI GAWTC 5 cut(s) 37, 1126, 1807, 1827, 2209
Tru1I TTAA 3 cut(s) 1122, 2403, 2485
Tru9I TTAA 3 cut(s) 1122, 2403, 2485
TscAI CASTG 9 cut(s) 142, 210, 390, 823, 1116, 1381, 1867, 2044, 2179
TseFI GTSAC 4 cut(s) 842, 934, 1378, 2248
TseI GCWGC 2 cut(s) 1320, 2390
Tsp45I GTSAC 4 cut(s) 842, 934, 1378, 2248
TspGWI ACGGA 2 cut(s) 1296, 2267
TspMI CCCGGG 1 cut(s) 1315
TspRI CASTG 9 cut(s) 142, 210, 390, 823, 1116, 1381, 1867, 2044, 2179
Van91I CCANNNNNTGG 1 cut(s) 731
Vha464I CTTAAG 1 cut(s) 1121
VpaK11BI GGWCC 1 cut(s) 698
XapI RAATTY 8 cut(s) 103, 493, 531, 892, 1115, 1160, 1508, 2313
XbaI TCTAGA 3 cut(s) 1702, 1987, 2212
XceI RCATGY 2 cut(s) 258, 1101
XmaI CCCGGG 1 cut(s) 1315
XspI CTAG 7 cut(s) 1241, 1703, 1811, 1988, 2033, 2213, 2477
ZrmI AGTACT 1 cut(s) 54
Zsp2I ATGCAT 1 cut(s) 1394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.