Rroxscaffold_6G00415350

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000166
Physical Location & Seq
Forward (+)
37559578 .. 37562003
2426 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00415350.1

Sequence Viewer

Length: 1842 bp
ATGGAAGTTCCTAAGTTTCTCCTCCTTTTGCTATTTGCAGCAACATTTGCTCAGAGTCAAGAACGGTTACAAGGGTTGCCAAGATTAAGGAAAGGGAACTCCTTGAAAGTTGAGGAGGAGACCAACGTCTTGGTTTCACCAGATGGAACTTTTTCTAGTGGATTTTACAAAGTTGGTGCCAATGCCTCCTGTTATTCAATATGGTTCACCAATAGTGCCAATAAAACAATTGTCTGGATGGCTAACAGAGACAAGCCTGTGAGCAAAAGAGGCTCAAAGCTAACCCTCCATGGAAGTGGCAACCTGGTTTTGACAGATGCACTTGGTACACTCGTGTGGTCGACCAACACAATCTCTAACGAAGACATGGAAGTTGTGCTTCTTGACACAGGAAATTTGGTGCTGAGGAATCAAGCAAAGAGGGTAATCTGGCAGAGTTTTGATTCTCCCACAGATACACTTCTAGCAACACAGCCACTCACCAAGAACACAACCTTGGTGTCCATGAGAAGCCAAGGTACACACTTGTCTGGGTTCTATAACTTCAAATTCGACGATAACAATGTCTTGTTTCTCATCTACAATGGCCCTCAACTTTCAAGTGTTTATTGGCCCCGGATTATTCCAAGTGTTTTTGAAAGTGGTAGAAATCCTTACAACAGCTCTAGGGTGGCAATTTTAGATGTGTCTGGACAATTTATATCGAGTGACAATATGCAGTTCAATGCATCTGACTACGGGGTTGGTCCAAAGCGGCGTCTAACGGTGGATTATGATGGCGTCTTAAGACTGTACAGTCTTCATGAATCGACAGGGTTGTGGAAACTCTCATGGTTGCCTGATGGTGTTGATGCATGCCGGGTTCAGGGCTTGTGCGGTGAATATGGTATTTGCACATACAAACCACAACCTACTTGTACCTGCCCTTCGGGGTTTTCCCTAAACGATCCCTCAGACTGGTCCAAAGGCTGCTCACCTCCCTTCAATTTGACTCAACTCACTCAAGATACAAGCAAGCTGGATTTCCTGGAGCTTCCTTACACAGATTACTATGGATATGACATGGCAACCTATACTCGTGGAATCTCTTTTGAAGCATGCAGGAATTCATGTCTAATGCATTCAAGTTGCTTGGGATTCGGATATGCACTGGATGGGATCGGAGAATGTTACCCCAAGAGTCTTCTGCTTAATGGATATCGTATGTCGAATGTTAAAAGCATCATCCATGTGAAGATTCCAAAAGGTTTTCTGAACCCTGGTGCAGTCCAAACCAGACTAGAAACTCATGATTTGAACTGTTCAGCAGCACAGTTTGTTGTAAGTACTGATCTCGAAACAGAAAAGGGCAATGGAAACCAGTACATGAAATACCTCATTGGATTTTTGAGTTCCTTTGGGCTAATTGAAGCAATCGGCATCAGTTTGACATGGTGGTTTGTGTTCCGAAAGCAAGCTCATGACGAAATGATGAACATGGGGTACATGGCATTAGCCATAAATGCTGTGGGATTCAAGAGTTTCACCTATGCAGAACTAAAGAAAGCAACCAATGACTTCAAACAGGAGATAGGAAAAGGGGCTTTTGCACAAGAGTACACTGAGCACAACCAACTGGTACAATGTGTGACTGAAAAGATCAGAGTCGAAGGGCTTAAGGAAGTGATTGATCCTAGACTCTATCATAATTTCAACAAGAACAAGCTCGAAAGATTGATGAAGGTTGCTCTTCTGTGTGTGCAAGAAGACCGCAGTGCAAGACCTGCCATGAGCAAGGTTGTAGAGCTTCTATTTGAGAATGATGAGGGAAGAGTAGATGATGAAGAATTGAAGATCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

613

Amino Acids

68.77

Weight (kDa)

6.35

Isoelectric Point (pI)

35.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 164 2.8e-25 D-mannose binding lectin
S_locus_glycop PF00954 251 - 313 1.3e-08 S-locus glycoprotein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 795
Acc36I ACCTGC 2 cut(s) 929, 1771
AccB1I GGYRCC 1 cut(s) 176
AccI GTMKAC 1 cut(s) 341
AciI CCGC 3 cut(s) 754, 876, 1750
AclWI GGATC 3 cut(s) 941, 1166, 1664
AcsI RAATTY 3 cut(s) 394, 548, 1105
AcyI GRCGYC 2 cut(s) 757, 780
AfaI GTAC 9 cut(s) 328, 520, 794, 919, 1327, 1364, 1484, 1598, 1620
AfiI CCNNNNNNNGG 2 cut(s) 865, 957
AflII CTTAAG 2 cut(s) 784, 1655
AjnI CCWGG 3 cut(s) 303, 1026, 1258
AjuI GAANNNNNNNTTGG 2 cut(s) 479, 511
AleI CACNNNNGTG 1 cut(s) 334
AluBI AGCT 7 cut(s) 280, 663, 1018, 1033, 1457, 1705, 1786
AluI AGCT 7 cut(s) 280, 663, 1018, 1033, 1457, 1705, 1786
Alw21I GWGCWC 1 cut(s) 1608
Alw26I GTCTC 2 cut(s) 113, 243
AlwI GGATC 3 cut(s) 941, 1166, 1664
AoxI GGCC 2 cut(s) 586, 611
ApeKI GCWGC 3 cut(s) 38, 969, 1307
ApoI RAATTY 3 cut(s) 394, 548, 1105
Asp700I GAANNNNTTC 1 cut(s) 151
AspS9I GGNCC 4 cut(s) 587, 612, 746, 960
AsuC2I CCSGG 2 cut(s) 616, 860
AsuHPI GGTGA 6 cut(s) 129, 199, 472, 890, 966, 1516
AvaII GGWCC 2 cut(s) 746, 960
BaeI ACNNNNGTAYC 2 cut(s) 318, 351
BanI GGYRCC 1 cut(s) 176
BarI GAAGNNNNNNTAC 4 cut(s) 502, 534, 910, 942
BauI CACGAG 2 cut(s) 332, 1077
BbsI GAAGAC 4 cut(s) 369, 791, 1175, 1752
Bbv12I GWGCWC 1 cut(s) 1608
BbvCI CCTCAGC 1 cut(s) 404
BbvI GCAGC 3 cut(s) 50, 956, 1319
BccI CCATC 5 cut(s) 137, 232, 770, 836, 1148
BciT130I CCWGG 3 cut(s) 305, 1028, 1260
BcnI CCSGG 2 cut(s) 616, 860
BcoDI GTCTC 2 cut(s) 113, 243
BfaI CTAG 5 cut(s) 156, 464, 666, 1280, 1674
BfrI CTTAAG 2 cut(s) 784, 1655
BfuAI ACCTGC 2 cut(s) 929, 1771
BisI GCNGC 4 cut(s) 39, 755, 970, 1308
BlsI GCNGC 4 cut(s) 40, 756, 971, 1309
BmcAI AGTACT 1 cut(s) 1327
Bme1390I CCNGG 5 cut(s) 305, 616, 860, 1028, 1260
Bme18I GGWCC 2 cut(s) 746, 960
BmgT120I GGNCC 4 cut(s) 587, 612, 746, 960
BmiI GGNNCC 2 cut(s) 178, 614
BmrFI CCNGG 5 cut(s) 305, 616, 860, 1028, 1260
BmsI GCATC 5 cut(s) 307, 737, 841, 1230, 1428
BoxI GACNNNNGTC 1 cut(s) 125
BpiI GAAGAC 4 cut(s) 369, 791, 1175, 1752
BpmI CTGGAG 1 cut(s) 1049
Bpu10I CCTNAGC 1 cut(s) 404
BpuEI CTTGAG 1 cut(s) 987
BpuMI CCSGG 2 cut(s) 616, 860
BsaHI GRCGYC 2 cut(s) 757, 780
BsaI GGTCTC 1 cut(s) 113
BsaJI CCNNGG 5 cut(s) 289, 495, 514, 614, 1258
Bsc4I CCNNNNNNNGG 2 cut(s) 865, 957
Bse1I ACTGG 4 cut(s) 962, 1155, 1360, 1620
Bse3DI GCAATG 1 cut(s) 1357
BseBI CCWGG 3 cut(s) 305, 1028, 1260
BseDI CCNNGG 5 cut(s) 289, 495, 514, 614, 1258
BseGI GGATG 3 cut(s) 243, 1159, 1224
BseLI CCNNNNNNNGG 2 cut(s) 865, 957
BseMI GCAATG 1 cut(s) 1357
BseMII CTCAG 4 cut(s) 65, 395, 966, 1593
BseNI ACTGG 4 cut(s) 962, 1155, 1360, 1620
BseRI GAGGAG 3 cut(s) 11, 128, 131
BseXI GCAGC 3 cut(s) 50, 956, 1319
BsgI GTGCAG 1 cut(s) 1284
BshFI GGCC 2 cut(s) 588, 613
BshNI GGYRCC 1 cut(s) 176
BsiHKAI GWGCWC 1 cut(s) 1608
BsiSI CCGG 2 cut(s) 616, 859
BslI CCNNNNNNNGG 2 cut(s) 865, 957
BsmAI GTCTC 2 cut(s) 113, 243
BsmI GAATGC 1 cut(s) 1120
BsnI GGCC 2 cut(s) 588, 613
Bso31I GGTCTC 1 cut(s) 113
Bsp1286I GDGCHC 1 cut(s) 1608
Bsp1407I TGTACA 1 cut(s) 792
Bsp143I GATC 6 cut(s) 946, 1158, 1330, 1638, 1669, 1833
Bsp19I CCATGG 1 cut(s) 289
BspACI CCGC 3 cut(s) 754, 876, 1750
BspANI GGCC 2 cut(s) 588, 613
BspCNI CTCAG 4 cut(s) 64, 396, 965, 1594
BspHI TCATGA 3 cut(s) 802, 1288, 1459
BspLI GGNNCC 2 cut(s) 178, 614
BspMI ACCTGC 2 cut(s) 929, 1771
BspPI GGATC 3 cut(s) 941, 1166, 1664
BspQI GCTCTTC 1 cut(s) 1734
BspT107I GGYRCC 1 cut(s) 176
BspTI CTTAAG 2 cut(s) 784, 1655
BspTNI GGTCTC 1 cut(s) 113
BsrDI GCAATG 1 cut(s) 1357
BsrGI TGTACA 1 cut(s) 792
BsrI ACTGG 4 cut(s) 962, 1155, 1360, 1620
BssECI CCNNGG 5 cut(s) 289, 495, 514, 614, 1258
BssMI GATC 6 cut(s) 946, 1158, 1330, 1638, 1669, 1833
BssNI GRCGYC 2 cut(s) 757, 780
BssSI CACGAG 2 cut(s) 332, 1077
BssT1I CCWWGG 3 cut(s) 289, 495, 514
Bst2BI CACGAG 2 cut(s) 332, 1077
Bst2UI CCWGG 3 cut(s) 305, 1028, 1260
Bst4CI ACNGT 6 cut(s) 66, 766, 792, 797, 1301, 1314
Bst6I CTCTTC 2 cut(s) 1734, 1804
BstACI GRCGYC 2 cut(s) 757, 780
BstAFI CTTAAG 2 cut(s) 784, 1655
BstAPI GCANNNNNTGC 2 cut(s) 47, 1763
BstAUI TGTACA 1 cut(s) 792
BstC8I GCNNGC 4 cut(s) 856, 1016, 1099, 1455
BstDEI CTNAG 5 cut(s) 12, 51, 404, 952, 1602
BstDSI CCRYGG 1 cut(s) 289
BstF5I GGATG 3 cut(s) 243, 1159, 1224
BstKTI GATC 6 cut(s) 949, 1161, 1333, 1641, 1672, 1836
BstMAI GTCTC 2 cut(s) 113, 243
BstMBI GATC 6 cut(s) 946, 1158, 1330, 1638, 1669, 1833
BstMWI GCNNNNNNNGC 4 cut(s) 47, 270, 1502, 1763
BstNI CCWGG 3 cut(s) 305, 1028, 1260
BstNSI RCATGY 2 cut(s) 858, 1101
BstPAI GACNNNNGTC 1 cut(s) 125
BstSCI CCNGG 5 cut(s) 303, 614, 858, 1026, 1258
BstV1I GCAGC 3 cut(s) 50, 956, 1319
BstV2I GAAGAC 4 cut(s) 369, 791, 1175, 1752
BstXI CCANNNNNNTGG 2 cut(s) 130, 296
BsuRI GGCC 2 cut(s) 588, 613
BtgI CCRYGG 1 cut(s) 289
BtsCI GGATG 3 cut(s) 243, 1159, 1224
BtsI GCAGTG 1 cut(s) 1759
BtsIMutI CAGTG 3 cut(s) 1148, 1599, 1759
BveI ACCTGC 2 cut(s) 929, 1771
Cac8I GCNNGC 4 cut(s) 856, 1016, 1099, 1455
CciI TCATGA 3 cut(s) 802, 1288, 1459
Cfr13I GGNCC 4 cut(s) 587, 612, 746, 960
CseI GACGC 2 cut(s) 746, 769
CsiI ACCWGGT 1 cut(s) 303
Csp6I GTAC 9 cut(s) 327, 519, 793, 918, 1326, 1363, 1483, 1597, 1619
CviQI GTAC 9 cut(s) 327, 519, 793, 918, 1326, 1363, 1483, 1597, 1619
DdeI CTNAG 5 cut(s) 12, 51, 404, 952, 1602
DpnI GATC 6 cut(s) 948, 1160, 1332, 1640, 1671, 1835
DpnII GATC 6 cut(s) 946, 1158, 1330, 1638, 1669, 1833
DrdI GACNNNNNNGTC 1 cut(s) 795
DseDI GACNNNNNNGTC 1 cut(s) 795
Eam1104I CTCTTC 2 cut(s) 1734, 1804
EarI CTCTTC 2 cut(s) 1734, 1804
Eco130I CCWWGG 3 cut(s) 289, 495, 514
Eco31I GGTCTC 1 cut(s) 113
Eco32I GATATC 1 cut(s) 1199
Eco47I GGWCC 2 cut(s) 746, 960
EcoRI GAATTC 1 cut(s) 1105
EcoRII CCWGG 3 cut(s) 303, 1026, 1258
EcoRV GATATC 1 cut(s) 1199
EcoT14I CCWWGG 3 cut(s) 289, 495, 514
EcoT22I ATGCAT 3 cut(s) 730, 856, 1122
ErhI CCWWGG 3 cut(s) 289, 495, 514
FalI AAGNNNNNCTT 2 cut(s) 363, 395
FblI GTMKAC 1 cut(s) 341
Fnu4HI GCNGC 4 cut(s) 39, 755, 970, 1308
FokI GGATG 3 cut(s) 250, 1166, 1211
Fsp4HI GCNGC 4 cut(s) 39, 755, 970, 1308
FspBI CTAG 5 cut(s) 156, 464, 666, 1280, 1674
GluI GCNGC 4 cut(s) 39, 755, 970, 1308
GsuI CTGGAG 1 cut(s) 1049
HaeIII GGCC 2 cut(s) 588, 613
HapII CCGG 2 cut(s) 616, 859
HgaI GACGC 2 cut(s) 746, 769
Hin1I GRCGYC 2 cut(s) 757, 780
HincII GTYRAC 1 cut(s) 342
HindII GTYRAC 1 cut(s) 342
HpaII CCGG 2 cut(s) 616, 859
HphI GGTGA 6 cut(s) 129, 199, 472, 890, 966, 1516
Hpy166II GTNNAC 5 cut(s) 207, 329, 342, 521, 1599
Hpy188I TCNGA 8 cut(s) 54, 733, 955, 1142, 1163, 1254, 1448, 1643
Hpy8I GTNNAC 5 cut(s) 207, 329, 342, 521, 1599
Hpy99I CGWCG 1 cut(s) 557
HpyAV CCTTC 4 cut(s) 936, 991, 1643, 1714
HpyCH4III ACNGT 6 cut(s) 66, 766, 792, 797, 1301, 1314
HpyCH4IV ACGT 1 cut(s) 126
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 270, 1502, 1763
HpyF3I CTNAG 5 cut(s) 12, 51, 404, 952, 1602
HpySE526I ACGT 1 cut(s) 126
Hsp92I GRCGYC 2 cut(s) 757, 780
Kzo9I GATC 6 cut(s) 946, 1158, 1330, 1638, 1669, 1833
LguI GCTCTTC 1 cut(s) 1734
LmnI GCTCC 1 cut(s) 1030
Lsp1109I GCAGC 3 cut(s) 50, 956, 1319
LweI GCATC 5 cut(s) 307, 737, 841, 1230, 1428
MabI ACCWGGT 1 cut(s) 303
MaeI CTAG 5 cut(s) 156, 464, 666, 1280, 1674
MaeII ACGT 1 cut(s) 126
MaeIII GTNAC 4 cut(s) 66, 707, 1169, 1627
MalI GATC 6 cut(s) 948, 1160, 1332, 1640, 1671, 1835
MboI GATC 6 cut(s) 946, 1158, 1330, 1638, 1669, 1833
MboII GAAGA 8 cut(s) 374, 791, 1175, 1246, 1721, 1757, 1821, 1835
MfeI CAATTG 1 cut(s) 228
MhlI GDGCHC 1 cut(s) 1608
MlyI GAGTC 5 cut(s) 64, 985, 1189, 1653, 1671
Mph1103I ATGCAT 3 cut(s) 730, 856, 1122
MroXI GAANNNNTTC 1 cut(s) 151
MseI TTAA 5 cut(s) 86, 785, 1191, 1215, 1656
MslI CAYNNNNRTG 3 cut(s) 294, 334, 1229
MspCI CTTAAG 2 cut(s) 784, 1655
MspI CCGG 2 cut(s) 616, 859
MspR9I CCNGG 5 cut(s) 305, 616, 860, 1028, 1260
MunI CAATTG 1 cut(s) 228
Mva1269I GAATGC 1 cut(s) 1120
MvaI CCWGG 3 cut(s) 305, 1028, 1260
MwoI GCNNNNNNNGC 4 cut(s) 47, 270, 1502, 1763
NciI CCSGG 2 cut(s) 616, 860
NcoI CCATGG 1 cut(s) 289
NdeII GATC 6 cut(s) 946, 1158, 1330, 1638, 1669, 1833
NlaIV GGNNCC 2 cut(s) 178, 614
NmuCI GTSAC 2 cut(s) 707, 1627
NsiI ATGCAT 3 cut(s) 730, 856, 1122
NspI RCATGY 2 cut(s) 858, 1101
OliI CACNNNNGTG 1 cut(s) 334
PaeI GCATGC 2 cut(s) 858, 1101
PagI TCATGA 3 cut(s) 802, 1288, 1459
PciSI GCTCTTC 1 cut(s) 1734
PctI GAATGC 1 cut(s) 1120
PdmI GAANNNNTTC 1 cut(s) 151
PfeI GAWTC 7 cut(s) 409, 443, 806, 1083, 1137, 1237, 1512
PfoI TCCNGGA 1 cut(s) 1026
PkrI GCNGC 4 cut(s) 40, 756, 971, 1309
PleI GAGTC 5 cut(s) 63, 985, 1188, 1652, 1671
PpsI GAGTC 5 cut(s) 63, 985, 1188, 1652, 1671
PshAI GACNNNNGTC 1 cut(s) 125
Psp6I CCWGG 3 cut(s) 303, 1026, 1258
PspGI CCWGG 3 cut(s) 303, 1026, 1258
PspN4I GGNNCC 2 cut(s) 178, 614
PspPI GGNCC 4 cut(s) 587, 612, 746, 960
PsrI GAACNNNNNNTAC 2 cut(s) 1466, 1498
RsaI GTAC 9 cut(s) 328, 520, 794, 919, 1327, 1364, 1484, 1598, 1620
RsaNI GTAC 9 cut(s) 327, 519, 793, 918, 1326, 1363, 1483, 1597, 1619
RseI CAYNNNNRTG 3 cut(s) 294, 334, 1229
SalI GTCGAC 1 cut(s) 340
SapI GCTCTTC 1 cut(s) 1734
SaqAI TTAA 5 cut(s) 86, 785, 1191, 1215, 1656
SatI GCNGC 4 cut(s) 39, 755, 970, 1308
Sau3AI GATC 6 cut(s) 946, 1158, 1330, 1638, 1669, 1833
Sau96I GGNCC 4 cut(s) 587, 612, 746, 960
ScaI AGTACT 1 cut(s) 1327
SchI GAGTC 5 cut(s) 64, 985, 1189, 1653, 1671
ScrFI CCNGG 5 cut(s) 305, 616, 860, 1028, 1260
SduI GDGCHC 1 cut(s) 1608
SexAI ACCWGGT 1 cut(s) 303
SfaNI GCATC 5 cut(s) 307, 737, 841, 1230, 1428
SinI GGWCC 2 cut(s) 746, 960
SmiMI CAYNNNNRTG 3 cut(s) 294, 334, 1229
SmlI CTYRAG 3 cut(s) 784, 1002, 1655
SmoI CTYRAG 3 cut(s) 784, 1002, 1655
SphI GCATGC 2 cut(s) 858, 1101
SsiI CCGC 3 cut(s) 754, 876, 1750
SspMI CTAG 5 cut(s) 156, 464, 666, 1280, 1674
StyD4I CCNGG 5 cut(s) 303, 614, 858, 1026, 1258
StyI CCWWGG 3 cut(s) 289, 495, 514
TaaI ACNGT 6 cut(s) 66, 766, 792, 797, 1301, 1314
TaiI ACGT 1 cut(s) 129
TaqI TCGA 8 cut(s) 341, 552, 704, 809, 1208, 1335, 1647, 1707
TatI WGTACW 4 cut(s) 792, 1325, 1362, 1596
TauI GCSGC 1 cut(s) 757
TfiI GAWTC 7 cut(s) 409, 443, 806, 1083, 1137, 1237, 1512
Tru1I TTAA 5 cut(s) 86, 785, 1191, 1215, 1656
Tru9I TTAA 5 cut(s) 86, 785, 1191, 1215, 1656
TscAI CASTG 3 cut(s) 1155, 1606, 1759
TseFI GTSAC 2 cut(s) 707, 1627
TseI GCWGC 3 cut(s) 38, 969, 1307
Tsp45I GTSAC 2 cut(s) 707, 1627
TspDTI ATGAA 7 cut(s) 791, 819, 1098, 1382, 1487, 1733, 1836
TspRI CASTG 3 cut(s) 1155, 1606, 1759
Vha464I CTTAAG 2 cut(s) 784, 1655
VpaK11BI GGWCC 2 cut(s) 746, 960
XapI RAATTY 3 cut(s) 394, 548, 1105
XceI RCATGY 2 cut(s) 858, 1101
XcmI CCANNNNNNNNNTGG 1 cut(s) 1504
XmiI GTMKAC 1 cut(s) 341
XmnI GAANNNNTTC 1 cut(s) 151
XspI CTAG 5 cut(s) 156, 464, 666, 1280, 1674
ZrmI AGTACT 1 cut(s) 1327
Zsp2I ATGCAT 3 cut(s) 730, 856, 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.