Rh3DG139300

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000166
Physical Location & Seq
Reverse (-)
11891497 .. 11907299
15803 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG139300.1

Sequence Viewer

Length: 1899 bp
ATGAAGTACAGAGCTTTTTCAGTCTCCTTTCTATGTCTTCTCTGTTTTGCAACTGCAAAAACCCTAGGTAGTCTAAAGAGAGGATCTTCTCTTTCAGTGGAGGATGATTCAGATTTCCTAACCTCACCAGACAAGTCTTTCACGTGTGGGTTTCATGGGGTTGGCACAAATGCCTACTGGTTCTCAATTTGGTTCACAAGCTCAAAAGACAGGACCATTGTTTGGATGGCCAACAGGGACAAGCCAGTCAATGGCTTGGGGTCTAGAGTCTATCTGAGCCGAGATGGCTCGATGGTCTTGACTGATGTAGATGGAGCCATCATCTGGAAGAGCAGCACCAACTCGAGTACCAGTACTGTTGCTGAAAGAGCTGAGCTTTTGGATTCTGGCAACCTTGTTCTGAAGGACCCCAGTGGTAAAATTCTATGGCAAAGCTTTGATTTTCCTACTGATACTTTGCTCCCAAACCAACGCTTTAGAAAGACCAATAAGTTGATTTCTAATTTGGGAAGAGGGGATTTTGGTACTGGCTATTTTAGTTTCTATTTTGATAATGATAATGTTTTGAAGTTGATGTATGATGGTCCTGATATTTCTAGCTTGTACTGGCCTGACCTTGATTATAGTGTGTTTCAGAATGGCAGAAATGCTTATAATAGTAGTAGAGTTGCAGTTTTAGATGAACTTGGTAGTTTTTCGTCTAGTGATGAACTGCAATTTAGTGCTTTTGACATGGGTTTGAGAGTGAAAAGGAGGTTGTCGATGGATTATGATGGAAATCTAAGACTTTATAGTCTTAATAGCTCAACAGGATTGTGGATAATCACATGGCAAGCGATGGTGGAGCTTTGTAAGGTTCATGGGATATGTGGGCAAAATGGGATTTGTATATATACACCAGGGCCAAAGTGTTCATGTCCTCCTGGCTATGAAGTAGCTGATCCAAGTAACTTAAACTTGGGCTGCAAGCGTAAGTTCAAGAAGCGTACATGCTCGAAGTCCCAAGAAGAGAAATTTGTGCAGATTCCGCAAGTAGATTTCTATGGATTTGATCTCAATTTCAGTAACACAGTTTCAATTGATGATTGCAGACAGCTCTGCTTGGGGGATTGCCGGTGTGAGGCATTTAGCTATAGGCTAAATGGGGAAGGGAGGTGTTACACCAAAAGTGCTCTTTTCAATGGCTACAAGTCTCCAGATTTTGTGGGCAGTATATACTTGAGAATGCCTGTGAGTGTGGAAGCACCATTACTAGTCACCAGGCTCAATGCCCTGGATTCATGTAAGAGTACTGAGGCCCAAAAAATGGGTTCTGCTTCAATGTATGACAATACTAGTAAAAGGGTAAGATGGGCATATCTGTATTGGTTTGCTACTGCAGCTGGTGCAGTTGAAATTCTCTTCATACTTTCAGAGTTGGTGAAGGGCATTCGACTTTCGAATTGGGCATTGGAGGATAGCGAGGAGCAAGAGGCAGAGCTGACTAGGTGTGTGAGGATAGTGAAAAGGAAGATTCAATGTGGAGAAGATTCATGGATGGAGGATATGTTGGATCCAAGACTAAAAGGGCAGTTCAGCAGGAAACAAGCAGAAAAGATGGTTGAGATTGGTATTTCTTGTGTGGAAGAAGATAGGAGCAGAAGACCAACAATGGATTCAGTATTACAAGATTTGCTAGAATGTGAAGGTTTGAGTGATGTCAATCAATTTTCAGGTGTGGTTTTCTTAACAAATAGCAATCTGGTTCAACCATCAGAAACTGATGATCAGAGTGTCCATGTGGAGCAAGCTGAAAATGTTCAAAGTGATGTGCAAGTTGAAAGTGATATGCATTATGGATCAGTGCAGCAAACTGCAAATGTACCAACACCCTCAATTGTTGCAAGTGCTTCATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

632

Amino Acids

70.78

Weight (kDa)

5.22

Isoelectric Point (pI)

39.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 162 1.1e-25 D-mannose binding lectin
S_locus_glycop PF00954 234 - 311 7.5e-10 S-locus glycoprotein domain
PAN_2 PF08276 331 - 389 9.4e-07 PAN-like domain
PAN_1 PF00024 338 - 390 6.6e-06 PAN domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 654
AasI GACNNNNNNGTC 2 cut(s) 245, 792
AccB7I CCANNNNNTGG 4 cut(s) 222, 251, 324, 1306
AciI CCGC 1 cut(s) 1028
AclWI GGATC 5 cut(s) 91, 935, 1547, 1560, 1846
AcoI YGGCCR 1 cut(s) 228
AcsI RAATTY 3 cut(s) 420, 1013, 1395
AcuI CTGAAG 1 cut(s) 422
AcvI CACGTG 1 cut(s) 144
AfaI GTAC 8 cut(s) 8, 349, 355, 526, 605, 988, 1291, 1863
AfiI CCNNNNNNNGG 5 cut(s) 222, 251, 324, 1120, 1306
AflIII ACRYGT 1 cut(s) 143
AhlI ACTAGT 2 cut(s) 1252, 1334
AjnI CCWGG 4 cut(s) 898, 922, 1259, 1272
AjuI GAANNNNNNNTTGG 4 cut(s) 1433, 1465, 1639, 1671
Alw21I GWGCWC 1 cut(s) 1174
Alw26I GTCTC 2 cut(s) 28, 1197
AlwI GGATC 5 cut(s) 91, 935, 1547, 1560, 1846
AlwNI CAGNNNCTG 1 cut(s) 1760
Ama87I CYCGRG 1 cut(s) 343
AoxI GGCC 4 cut(s) 228, 608, 902, 1296
ApeKI GCWGC 4 cut(s) 333, 963, 1379, 1846
ApoI RAATTY 3 cut(s) 420, 1013, 1395
Asp700I GAANNNNTTC 1 cut(s) 1797
AspA2I CCTAGG 1 cut(s) 64
AspS9I GGNCC 5 cut(s) 213, 406, 584, 902, 1297
AsuHPI GGTGA 3 cut(s) 117, 1249, 1432
AsuII TTCGAA 1 cut(s) 1439
AvaI CYCGRG 1 cut(s) 343
AvaII GGWCC 3 cut(s) 213, 406, 584
AvrII CCTAGG 1 cut(s) 64
BaeI ACNNNNGTAYC 2 cut(s) 331, 364
BalI TGGCCA 1 cut(s) 230
BamHI GGATCC 1 cut(s) 1552
BarI GAAGNNNNNNTAC 2 cut(s) 1233, 1265
BbrPI CACGTG 1 cut(s) 144
BbsI GAAGAC 2 cut(s) 29, 1648
Bbv12I GWGCWC 1 cut(s) 1174
BbvI GCAGC 4 cut(s) 345, 950, 1391, 1858
BciT130I CCWGG 4 cut(s) 900, 924, 1261, 1274
BclI TGATCA 1 cut(s) 1765
BcoDI GTCTC 2 cut(s) 28, 1197
BcuI ACTAGT 2 cut(s) 1252, 1334
BfaI CTAG 8 cut(s) 65, 264, 597, 702, 1253, 1335, 1485, 1676
BfmI CTRYAG 2 cut(s) 1132, 1377
BglI GCCNNNNNGGC 1 cut(s) 285
BisI GCNGC 4 cut(s) 334, 964, 1380, 1847
BlnI CCTAGG 1 cut(s) 64
BlpI GCTNAGC 1 cut(s) 372
BlsI GCNGC 4 cut(s) 335, 965, 1381, 1848
BmcAI AGTACT 2 cut(s) 355, 1291
Bme1390I CCNGG 4 cut(s) 900, 924, 1261, 1274
Bme18I GGWCC 3 cut(s) 213, 406, 584
BmeT110I CYCGRG 1 cut(s) 343
BmgT120I GGNCC 5 cut(s) 213, 406, 584, 902, 1297
BmiI GGNNCC 3 cut(s) 316, 408, 1554
BmrFI CCNGG 4 cut(s) 900, 924, 1261, 1274
BmrI ACTGGG 1 cut(s) 405
BmuI ACTGGG 1 cut(s) 405
BpiI GAAGAC 2 cut(s) 29, 1648
BpmI CTGGAG 1 cut(s) 1179
Bpu1102I GCTNAGC 1 cut(s) 372
Bpu14I TTCGAA 1 cut(s) 1439
BpuEI CTTGAG 1 cut(s) 1240
BsaAI YACGTR 1 cut(s) 144
BsaBI GATNNNNATC 2 cut(s) 777, 1701
BsaJI CCNNGG 3 cut(s) 64, 899, 1272
BsaXI ACNNNNNCTCC 2 cut(s) 1532, 1562
Bsc4I CCNNNNNNNGG 5 cut(s) 222, 251, 324, 1120, 1306
Bse118I RCCGGY 1 cut(s) 1113
Bse1I ACTGG 6 cut(s) 182, 245, 351, 411, 532, 611
Bse8I GATNNNNATC 2 cut(s) 777, 1701
BseBI CCWGG 4 cut(s) 900, 924, 1261, 1274
BseDI CCNNGG 3 cut(s) 64, 899, 1272
BseGI GGATG 3 cut(s) 109, 231, 1542
BseJI GATNNNNATC 2 cut(s) 777, 1701
BseLI CCNNNNNNNGG 5 cut(s) 222, 251, 324, 1120, 1306
BseMII CTCAG 3 cut(s) 266, 363, 1284
BseNI ACTGG 6 cut(s) 182, 245, 351, 411, 532, 611
BseRI GAGGAG 1 cut(s) 1478
BseXI GCAGC 4 cut(s) 345, 950, 1391, 1858
BsgI GTGCAG 3 cut(s) 1040, 1407, 1865
BshFI GGCC 4 cut(s) 230, 610, 904, 1298
BsiHKAI GWGCWC 1 cut(s) 1174
BsiHKCI CYCGRG 1 cut(s) 343
BsiSI CCGG 1 cut(s) 1114
BslFI GGGAC 2 cut(s) 251, 985
BslI CCNNNNNNNGG 5 cut(s) 222, 251, 324, 1120, 1306
BsmAI GTCTC 2 cut(s) 28, 1197
BsmFI GGGAC 2 cut(s) 251, 985
BsmI GAATGC 2 cut(s) 1230, 1428
BsnI GGCC 4 cut(s) 230, 610, 904, 1298
BsoBI CYCGRG 1 cut(s) 343
Bsp119I TTCGAA 1 cut(s) 1439
Bsp1286I GDGCHC 1 cut(s) 1174
Bsp143I GATC 6 cut(s) 83, 940, 1051, 1552, 1765, 1838
Bsp1720I GCTNAGC 1 cut(s) 372
BspACI CCGC 1 cut(s) 1028
BspANI GGCC 4 cut(s) 230, 610, 904, 1298
BspCNI CTCAG 3 cut(s) 267, 364, 1285
BspLI GGNNCC 3 cut(s) 316, 408, 1554
BspMAI CTGCAG 1 cut(s) 1381
BspPI GGATC 5 cut(s) 91, 935, 1547, 1560, 1846
BspQI GCTCTTC 1 cut(s) 323
BspT104I TTCGAA 1 cut(s) 1439
BsrFI RCCGGY 1 cut(s) 1113
BsrI ACTGG 6 cut(s) 182, 245, 351, 411, 532, 611
BssAI RCCGGY 1 cut(s) 1113
BssECI CCNNGG 3 cut(s) 64, 899, 1272
BssMI GATC 6 cut(s) 83, 940, 1051, 1552, 1765, 1838
BssT1I CCWWGG 1 cut(s) 64
Bst2UI CCWGG 4 cut(s) 900, 924, 1261, 1274
Bst4CI ACNGT 2 cut(s) 358, 1072
Bst6I CTCTTC 4 cut(s) 323, 505, 1002, 1406
BstAPI GCANNNNNTGC 1 cut(s) 1385
BstBAI YACGTR 1 cut(s) 144
BstBI TTCGAA 1 cut(s) 1439
BstC8I GCNNGC 3 cut(s) 834, 968, 1788
BstDEI CTNAG 4 cut(s) 275, 372, 782, 1293
BstF5I GGATG 3 cut(s) 109, 231, 1542
BstKTI GATC 6 cut(s) 86, 943, 1054, 1555, 1768, 1841
BstMAI GTCTC 2 cut(s) 28, 1197
BstMBI GATC 6 cut(s) 83, 940, 1051, 1552, 1765, 1838
BstMWI GCNNNNNNNGC 5 cut(s) 285, 368, 1027, 1379, 1385
BstNI CCWGG 4 cut(s) 900, 924, 1261, 1274
BstNSI RCATGY 1 cut(s) 993
BstSCI CCNGG 4 cut(s) 898, 922, 1259, 1272
BstSFI CTRYAG 2 cut(s) 1132, 1377
BstV1I GCAGC 4 cut(s) 345, 950, 1391, 1858
BstV2I GAAGAC 2 cut(s) 29, 1648
BstX2I RGATCY 2 cut(s) 83, 1552
BstYI RGATCY 2 cut(s) 83, 1552
BsuRI GGCC 4 cut(s) 230, 610, 904, 1298
BtgZI GCGATG 1 cut(s) 851
BtsCI GGATG 3 cut(s) 109, 231, 1542
BtsIMutI CAGTG 3 cut(s) 102, 418, 1848
Cac8I GCNNGC 3 cut(s) 834, 968, 1788
CaiI CAGNNNCTG 1 cut(s) 1760
Cfr10I RCCGGY 1 cut(s) 1113
Cfr13I GGNCC 5 cut(s) 213, 406, 584, 902, 1297
Csp6I GTAC 8 cut(s) 7, 348, 354, 525, 604, 987, 1290, 1862
CviAII CATG 9 cut(s) 155, 733, 828, 860, 915, 990, 1281, 1533, 1778
CviQI GTAC 8 cut(s) 7, 348, 354, 525, 604, 987, 1290, 1862
DdeI CTNAG 4 cut(s) 275, 372, 782, 1293
DpnI GATC 6 cut(s) 85, 942, 1053, 1554, 1767, 1840
DpnII GATC 6 cut(s) 83, 940, 1051, 1552, 1765, 1838
DrdI GACNNNNNNGTC 2 cut(s) 245, 792
DseDI GACNNNNNNGTC 2 cut(s) 245, 792
EaeI YGGCCR 1 cut(s) 228
Eam1104I CTCTTC 4 cut(s) 323, 505, 1002, 1406
EarI CTCTTC 4 cut(s) 323, 505, 1002, 1406
Eco130I CCWWGG 1 cut(s) 64
Eco47I GGWCC 3 cut(s) 213, 406, 584
Eco57I CTGAAG 1 cut(s) 422
Eco72I CACGTG 1 cut(s) 144
Eco88I CYCGRG 1 cut(s) 343
EcoO109I RGGNCCY 1 cut(s) 406
EcoRII CCWGG 4 cut(s) 898, 922, 1259, 1272
EcoT14I CCWWGG 1 cut(s) 64
EcoT22I ATGCAT 1 cut(s) 1833
ErhI CCWWGG 1 cut(s) 64
FaeI CATG 9 cut(s) 158, 736, 831, 863, 918, 993, 1284, 1536, 1781
FaqI GGGAC 2 cut(s) 251, 985
FatI CATG 9 cut(s) 154, 732, 827, 859, 914, 989, 1280, 1532, 1777
FbaI TGATCA 1 cut(s) 1765
Fnu4HI GCNGC 4 cut(s) 334, 964, 1380, 1847
FokI GGATG 3 cut(s) 116, 238, 1549
Fsp4HI GCNGC 4 cut(s) 334, 964, 1380, 1847
FspBI CTAG 8 cut(s) 65, 264, 597, 702, 1253, 1335, 1485, 1676
GluI GCNGC 4 cut(s) 334, 964, 1380, 1847
GsuI CTGGAG 1 cut(s) 1179
HaeIII GGCC 4 cut(s) 230, 610, 904, 1298
HapII CCGG 1 cut(s) 1114
Hin1II CATG 9 cut(s) 158, 736, 831, 863, 918, 993, 1284, 1536, 1781
HindIII AAGCTT 1 cut(s) 433
HinfI GANTC 8 cut(s) 107, 267, 383, 1024, 1277, 1513, 1529, 1655
HpaII CCGG 1 cut(s) 1114
HphI GGTGA 3 cut(s) 117, 1249, 1432
Hpy166II GTNNAC 1 cut(s) 195
Hpy188I TCNGA 7 cut(s) 112, 276, 402, 636, 1414, 1756, 1770
Hpy188III TCNNGA 6 cut(s) 264, 298, 325, 587, 979, 1196
Hpy8I GTNNAC 1 cut(s) 195
HpyAV CCTTC 4 cut(s) 397, 1142, 1417, 1679
HpyCH4III ACNGT 2 cut(s) 358, 1072
HpyCH4IV ACGT 1 cut(s) 143
HpyF10VI GCNNNNNNNGC 5 cut(s) 285, 368, 1027, 1379, 1385
HpyF3I CTNAG 4 cut(s) 275, 372, 782, 1293
HpySE526I ACGT 1 cut(s) 143
Hsp92II CATG 9 cut(s) 158, 736, 831, 863, 918, 993, 1284, 1536, 1781
Ksp22I TGATCA 1 cut(s) 1765
Kzo9I GATC 6 cut(s) 83, 940, 1051, 1552, 1765, 1838
LguI GCTCTTC 1 cut(s) 323
LmnI GCTCC 6 cut(s) 314, 465, 844, 1465, 1635, 1783
Lsp1109I GCAGC 4 cut(s) 345, 950, 1391, 1858
MaeI CTAG 8 cut(s) 65, 264, 597, 702, 1253, 1335, 1485, 1676
MaeII ACGT 1 cut(s) 143
MaeIII GTNAC 4 cut(s) 947, 1064, 1157, 1255
MalI GATC 6 cut(s) 85, 942, 1053, 1554, 1767, 1840
MboI GATC 6 cut(s) 83, 940, 1051, 1552, 1765, 1838
MfeI CAATTG 2 cut(s) 1077, 1875
MflI RGATCY 2 cut(s) 83, 1552
MhlI GDGCHC 1 cut(s) 1174
MlsI TGGCCA 1 cut(s) 230
MluNI TGGCCA 1 cut(s) 230
MlyI GAGTC 1 cut(s) 276
MmeI TCCRAC 1 cut(s) 1530
Mox20I TGGCCA 1 cut(s) 230
Mph1103I ATGCAT 1 cut(s) 1833
MroXI GAANNNNTTC 1 cut(s) 1797
MscI TGGCCA 1 cut(s) 230
MseI TTAA 4 cut(s) 798, 953, 1727, 1897
Msp20I TGGCCA 1 cut(s) 230
MspA1I CMGCKG 1 cut(s) 1382
MspI CCGG 1 cut(s) 1114
MspR9I CCNGG 4 cut(s) 900, 924, 1261, 1274
MunI CAATTG 2 cut(s) 1077, 1875
Mva1269I GAATGC 2 cut(s) 1230, 1428
MvaI CCWGG 4 cut(s) 900, 924, 1261, 1274
MwoI GCNNNNNNNGC 5 cut(s) 285, 368, 1027, 1379, 1385
NdeII GATC 6 cut(s) 83, 940, 1051, 1552, 1765, 1838
NlaIII CATG 9 cut(s) 158, 736, 831, 863, 918, 993, 1284, 1536, 1781
NlaIV GGNNCC 3 cut(s) 316, 408, 1554
NmeAIII GCCGAG 1 cut(s) 305
NmuCI GTSAC 1 cut(s) 1255
NsiI ATGCAT 1 cut(s) 1833
NspI RCATGY 1 cut(s) 993
NspV TTCGAA 1 cut(s) 1439
PaeR7I CTCGAG 1 cut(s) 343
PciSI GCTCTTC 1 cut(s) 323
PctI GAATGC 2 cut(s) 1230, 1428
PdmI GAANNNNTTC 1 cut(s) 1797
PfeI GAWTC 7 cut(s) 107, 383, 1024, 1277, 1513, 1529, 1655
PflMI CCANNNNNTGG 4 cut(s) 222, 251, 324, 1306
PkrI GCNGC 4 cut(s) 335, 965, 1381, 1848
PleI GAGTC 1 cut(s) 275
PmaCI CACGTG 1 cut(s) 144
PmlI CACGTG 1 cut(s) 144
PpsI GAGTC 1 cut(s) 275
Ppu21I YACGTR 1 cut(s) 144
PpuMI RGGWCCY 1 cut(s) 406
PsiI TTATAA 1 cut(s) 654
Psp5II RGGWCCY 1 cut(s) 406
Psp6I CCWGG 4 cut(s) 898, 922, 1259, 1272
PspCI CACGTG 1 cut(s) 144
PspGI CCWGG 4 cut(s) 898, 922, 1259, 1272
PspN4I GGNNCC 3 cut(s) 316, 408, 1554
PspPI GGNCC 5 cut(s) 213, 406, 584, 902, 1297
PspPPI RGGWCCY 1 cut(s) 406
PspXI VCTCGAGB 1 cut(s) 343
PstI CTGCAG 1 cut(s) 1381
PstNI CAGNNNCTG 1 cut(s) 1760
PsuI RGATCY 2 cut(s) 83, 1552
PvuII CAGCTG 1 cut(s) 1382
RsaI GTAC 8 cut(s) 8, 349, 355, 526, 605, 988, 1291, 1863
RsaNI GTAC 8 cut(s) 7, 348, 354, 525, 604, 987, 1290, 1862
SapI GCTCTTC 1 cut(s) 323
SaqAI TTAA 4 cut(s) 798, 953, 1727, 1897
SatI GCNGC 4 cut(s) 334, 964, 1380, 1847
Sau3AI GATC 6 cut(s) 83, 940, 1051, 1552, 1765, 1838
Sau96I GGNCC 5 cut(s) 213, 406, 584, 902, 1297
ScaI AGTACT 2 cut(s) 355, 1291
SchI GAGTC 1 cut(s) 276
ScrFI CCNGG 4 cut(s) 900, 924, 1261, 1274
SduI GDGCHC 1 cut(s) 1174
SfcI CTRYAG 2 cut(s) 1132, 1377
Sfr274I CTCGAG 1 cut(s) 343
SfuI TTCGAA 1 cut(s) 1439
SinI GGWCC 3 cut(s) 213, 406, 584
SlaI CTCGAG 1 cut(s) 343
SmlI CTYRAG 2 cut(s) 343, 1219
SmoI CTYRAG 2 cut(s) 343, 1219
SpeI ACTAGT 2 cut(s) 1252, 1334
SsiI CCGC 1 cut(s) 1028
SspMI CTAG 8 cut(s) 65, 264, 597, 702, 1253, 1335, 1485, 1676
StyD4I CCNGG 4 cut(s) 898, 922, 1259, 1272
StyI CCWWGG 1 cut(s) 64
TaaI ACNGT 2 cut(s) 358, 1072
TaiI ACGT 1 cut(s) 146
TaqI TCGA 6 cut(s) 290, 344, 761, 995, 1432, 1439
TatI WGTACW 4 cut(s) 6, 353, 603, 1289
TfiI GAWTC 7 cut(s) 107, 383, 1024, 1277, 1513, 1529, 1655
Tru1I TTAA 4 cut(s) 798, 953, 1727, 1897
Tru9I TTAA 4 cut(s) 798, 953, 1727, 1897
TscAI CASTG 3 cut(s) 102, 418, 1848
TseFI GTSAC 1 cut(s) 1255
TseI GCWGC 4 cut(s) 333, 963, 1379, 1846
Tsp45I GTSAC 1 cut(s) 1255
TspRI CASTG 3 cut(s) 102, 418, 1848
Van91I CCANNNNNTGG 4 cut(s) 222, 251, 324, 1306
VpaK11BI GGWCC 3 cut(s) 213, 406, 584
XapI RAATTY 3 cut(s) 420, 1013, 1395
XbaI TCTAGA 1 cut(s) 263
XceI RCATGY 1 cut(s) 993
XcmI CCANNNNNNNNNTGG 1 cut(s) 223
XhoI CTCGAG 1 cut(s) 343
XmaJI CCTAGG 1 cut(s) 64
XmnI GAANNNNTTC 1 cut(s) 1797
XspI CTAG 8 cut(s) 65, 264, 597, 702, 1253, 1335, 1485, 1676
ZrmI AGTACT 2 cut(s) 355, 1291
Zsp2I ATGCAT 1 cut(s) 1833
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.