Rmu_sc0001161.1_g000018

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001161.1
OG0000166
Physical Location & Seq
Reverse (-)
50816 .. 53101
2286 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001161.1_g000018.1.cds

Sequence Viewer

Length: 2286 bp
ctgatttcacctggtggtgttttcaccgccggctttcatcaagttggcaacaactcatattgctttgccatttggttcaacgagccatcatcatcgtcatcaccagtctcctaccagaaccgaactatagtctggatggcaaatcgtgaccaaccagtcaacgggaagcgctcaaagctctccctcctcaaaactggtaatctcatcttaactgatgctgctcaatcccatgtttggactacaacaaccacctcaatctcccctgcccgtttaagcctccacgactccggtaatctggttctgcttaatctgaagacgaaggttgttctatggcagagctttgactccccaactgacacccttcttccactccaaccattcaccagaaccgccatacttgtctccaccagaagccagagcaacttctcctccggcttctataagctctttttcgacaatgataaccttctcaggctactctttgacggccctgagatttctagtgtctactggcccaaccctgcatatgtgagctgggataatgcaaggtctacttacaacagcagtagaactgctgtgcttgattccttgggcagttttgcttcttcggacaatctgacttttcttgcagttgattatggtgcaaagttgcagaggagattgactattgattttgatggaaatgttcgattgtatagccgaaaaatgccaggagagagttgggtggtttcatggcaagccttttcagacccttgtgtgattcatggaatttgtggagctaacagcctctgcagctacgatcccagttctgggaggaaatgctcttgccttccaggatatcagatggaaaatcatactgattggtctctggggtgtcaaccgaagtttcaattctcttatgtagaaggtgagtctcgttttctccaacttacgcaagttgagttctatggttacgattataatgagtaccaaaattatagctatggtgattgtgagaaaagatgcttggaactggataactgcaaggggtttcagtacacgtttgattctggtgtttataagtgtaatcccaagacgcagttgcgaagtggacacaggtggaacactcaaggttacttctatctgagactgcccaaggctcacctcttttctaacacagacataaagcccctgaagaaccttggttttagttgcacagaaaaagttgttgatctcgagagggagtatgttaaagatcgagtcagtaagccggtgaaattcctgctctggtttgcctatggagttgggggagttgaaatcatttgtatcatttttgtttggggtttattgagcagtacattctcaaaatcaaatgaagatattcacggctaccttcttactgcaaccgggttcaaaagatttagctacgctgagctcaagactgcaacgcggggttttagtgaagaaattgggagaggagcaggaggagttgtttacaaaggcatattggctgatcagcgagtggcagcgattaagctgctcagtgaagctaaccaagcagaagcagaatttctagcagaagctagtactattgggaaggtgaatcatatgaacttgatcgagatgtggggatattgctcagagggaaggcacaggcttcttgtttatgagtacatggagcatggttccttggcacagaagttagcttcccatgagcttgattgggagaagaggtttgagattgctgtcggcactgcaaagggtctagcttatttgcacgaagagtgcttggagtgggttctacattgtgatgtaaagcctcaaaacatactgttggactccaattttcaaccaaaggttgcagatttcgggctctccaagattcttaacagagatgagctcaggaattcaagcttttcgaggatacgaggaaccagaggttacattgctccggagtgggtgtataatcttcccatcacatccaaagtggatgtatacagctatggagtggttgtattggagatggtgaccggaaagaacccgacaatgggtgtggaaatcactgatggtgagcagagaagactaattatgtgggtgagggagaaactaaatggaactgaaattgcatccagaatcggagagatcatagatccctcgtttgacgaaggcaactatgatgtggaaaagatggaaattttgttaacagtagctttacattgtgtggaagaagacaaagattcaagaccaaccatgagtcaagtcgttgagatgcttcaacaccacggcaaagaatctcagtggcaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

761

Amino Acids

86.16

Weight (kDa)

6.15

Isoelectric Point (pI)

41.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 960, 1059
AasI GACNNNNNNGTC 1 cut(s) 155
AccI GTMKAC 3 cut(s) 507, 551, 1974
AccII CGCG 1 cut(s) 1429
AccIII TCCGGA 1 cut(s) 1930
AciI CCGC 3 cut(s) 27, 390, 1429
AclWI GGATC 2 cut(s) 794, 2123
AcsI RAATTY 5 cut(s) 768, 1256, 1547, 1885, 2172
AcuI CTGAAG 2 cut(s) 332, 1193
AdeI CACNNNGTG 1 cut(s) 14
AfaI GTAC 5 cut(s) 968, 1037, 1336, 1567, 1652
AfeI AGCGCT 1 cut(s) 170
AfiI CCNNNNNNNGG 6 cut(s) 161, 234, 809, 810, 2026, 2027
AflIII ACRYGT 1 cut(s) 1038
AgsI TTSAA 8 cut(s) 79, 890, 1295, 1393, 1829, 1890, 2220, 2255
AjnI CCWGG 3 cut(s) 10, 709, 832
AjuI GAANNNNNNNTTGG 2 cut(s) 989, 1021
Alw21I GWGCWC 2 cut(s) 1416, 1881
Alw26I GTCTC 5 cut(s) 112, 406, 870, 918, 1120
AlwI GGATC 2 cut(s) 794, 2123
AlwNI CAGNNNCTG 1 cut(s) 789
Ama87I CYCGRG 1 cut(s) 1214
Aor13HI TCCGGA 1 cut(s) 1930
Aor51HI AGCGCT 1 cut(s) 170
AoxI GGCC 2 cut(s) 487, 512
ApeKI GCWGC 4 cut(s) 218, 792, 1505, 1516
ApoI RAATTY 5 cut(s) 768, 1256, 1547, 1885, 2172
Asp700I GAANNNNTTC 1 cut(s) 1359
AspLEI GCGC 1 cut(s) 171
AspS9I GGNCC 2 cut(s) 488, 513
AsuC2I CCSGG 1 cut(s) 1387
AvaI CYCGRG 1 cut(s) 1214
BanII GRGCYC 3 cut(s) 1416, 1854, 1881
BbsI GAAGAC 3 cut(s) 320, 2065, 2214
Bbv12I GWGCWC 2 cut(s) 1416, 1881
BbvI GCAGC 4 cut(s) 205, 804, 1503, 1517
BccI CCATC 8 cut(s) 94, 130, 671, 838, 1961, 1996, 2039, 2161
BceAI ACGGC 3 cut(s) 502, 1381, 2278
BcgI CGANNNNNNTGC 2 cut(s) 1498, 1532
BciT130I CCWGG 3 cut(s) 12, 711, 834
BciVI GTATCC 1 cut(s) 1896
BclI TGATCA 1 cut(s) 1492
BcnI CCSGG 1 cut(s) 1387
BcoDI GTCTC 5 cut(s) 112, 406, 870, 918, 1120
BfaI CTAG 4 cut(s) 501, 1553, 1563, 1745
BfmI CTRYAG 2 cut(s) 126, 790
BfoI RGCGCY 1 cut(s) 172
BfuI GTATCC 1 cut(s) 1896
BisI GCNGC 4 cut(s) 219, 793, 1506, 1517
BlpI GCTNAGC 1 cut(s) 1410
BlsI GCNGC 4 cut(s) 220, 794, 1507, 1518
BmcAI AGTACT 1 cut(s) 1567
Bme1390I CCNGG 4 cut(s) 12, 711, 834, 1387
BmeT110I CYCGRG 1 cut(s) 1214
BmgT120I GGNCC 2 cut(s) 488, 513
BmiI GGNNCC 2 cut(s) 1666, 1912
BmrFI CCNGG 4 cut(s) 12, 711, 834, 1387
BmrI ACTGGG 1 cut(s) 798
BmsI GCATC 4 cut(s) 205, 992, 2114, 2238
BmuI ACTGGG 1 cut(s) 798
BpiI GAAGAC 3 cut(s) 320, 2065, 2214
BplI GAGNNNNNCTC 2 cut(s) 1863, 1895
Bpu10I CCTNAGC 1 cut(s) 1880
Bpu1102I GCTNAGC 1 cut(s) 1410
BpuEI CTTGAG 2 cut(s) 1092, 1400
BpuMI CCSGG 1 cut(s) 1387
BsaI GGTCTC 1 cut(s) 870
BsaJI CCNNGG 5 cut(s) 588, 1134, 1180, 1668, 2260
BsaWI WCCGGW 3 cut(s) 287, 1930, 2009
Bsc4I CCNNNNNNNGG 6 cut(s) 161, 234, 809, 810, 2026, 2027
Bse118I RCCGGY 2 cut(s) 29, 1249
Bse1I ACTGG 6 cut(s) 104, 155, 199, 515, 804, 1017
Bse3DI GCAATG 1 cut(s) 1923
BseAI TCCGGA 1 cut(s) 1930
BseBI CCWGG 3 cut(s) 12, 711, 834
BseDI CCNNGG 5 cut(s) 588, 1134, 1180, 1668, 2260
BseGI GGATG 4 cut(s) 141, 1958, 1975, 2105
BseLI CCNNNNNNNGG 6 cut(s) 161, 234, 809, 810, 2026, 2027
BseMI GCAATG 1 cut(s) 1923
BseMII CTCAG 7 cut(s) 483, 484, 1115, 1401, 1534, 1632, 1894
BseNI ACTGG 6 cut(s) 104, 155, 199, 515, 804, 1017
BseRI GAGGAG 5 cut(s) 176, 418, 670, 1470, 1479
BseXI GCAGC 4 cut(s) 205, 804, 1503, 1517
BseYI CCCAGC 1 cut(s) 534
Bsh1236I CGCG 1 cut(s) 1429
BshFI GGCC 2 cut(s) 489, 514
BsiHKAI GWGCWC 2 cut(s) 1416, 1881
BsiHKCI CYCGRG 1 cut(s) 1214
BsiSI CCGG 7 cut(s) 30, 288, 432, 1250, 1386, 1931, 2010
BslI CCNNNNNNNGG 6 cut(s) 161, 234, 809, 810, 2026, 2027
BsmAI GTCTC 5 cut(s) 112, 406, 870, 918, 1120
BsnI GGCC 2 cut(s) 489, 514
Bso31I GGTCTC 1 cut(s) 870
BsoBI CYCGRG 1 cut(s) 1214
Bsp1286I GDGCHC 3 cut(s) 1416, 1854, 1881
Bsp13I TCCGGA 1 cut(s) 1930
Bsp143I GATC 7 cut(s) 799, 1210, 1234, 1492, 1596, 2121, 2128
Bsp1720I GCTNAGC 1 cut(s) 1410
BspACI CCGC 3 cut(s) 27, 390, 1429
BspANI GGCC 2 cut(s) 489, 514
BspCNI CTCAG 7 cut(s) 483, 484, 1116, 1402, 1533, 1631, 1893
BspEI TCCGGA 1 cut(s) 1930
BspFNI CGCG 1 cut(s) 1429
BspLI GGNNCC 2 cut(s) 1666, 1912
BspMAI CTGCAG 1 cut(s) 794
BspPI GGATC 2 cut(s) 794, 2123
BspTNI GGTCTC 1 cut(s) 870
BsrDI GCAATG 1 cut(s) 1923
BsrFI RCCGGY 2 cut(s) 29, 1249
BsrI ACTGG 6 cut(s) 104, 155, 199, 515, 804, 1017
BssAI RCCGGY 2 cut(s) 29, 1249
BssECI CCNNGG 5 cut(s) 588, 1134, 1180, 1668, 2260
BssMI GATC 7 cut(s) 799, 1210, 1234, 1492, 1596, 2121, 2128
BssNAI GTATAC 1 cut(s) 1975
BssT1I CCWWGG 4 cut(s) 588, 1134, 1180, 1668
Bst1107I GTATAC 1 cut(s) 1975
Bst2UI CCWGG 3 cut(s) 12, 711, 834
Bst4CI ACNGT 2 cut(s) 1812, 2185
Bst6I CTCTTC 2 cut(s) 1703, 1755
BstC8I GCNNGC 2 cut(s) 31, 738
BstDEI CTNAG 8 cut(s) 470, 492, 1124, 1410, 1520, 1618, 1880, 2274
BstDSI CCRYGG 1 cut(s) 2260
BstEII GGTNACC 1 cut(s) 2005
BstF5I GGATG 4 cut(s) 141, 1958, 1975, 2105
BstFNI CGCG 1 cut(s) 1429
BstH2I RGCGCY 1 cut(s) 172
BstHHI GCGC 1 cut(s) 171
BstKTI GATC 7 cut(s) 802, 1213, 1237, 1495, 1599, 2124, 2131
BstMAI GTCTC 5 cut(s) 112, 406, 870, 918, 1120
BstMBI GATC 7 cut(s) 799, 1210, 1234, 1492, 1596, 2121, 2128
BstMWI GCNNNNNNNGC 3 cut(s) 175, 792, 1535
BstNI CCWGG 3 cut(s) 12, 711, 834
BstPI GGTNACC 1 cut(s) 2005
BstSCI CCNGG 4 cut(s) 10, 709, 832, 1385
BstSFI CTRYAG 2 cut(s) 126, 790
BstUI CGCG 1 cut(s) 1429
BstV1I GCAGC 4 cut(s) 205, 804, 1503, 1517
BstV2I GAAGAC 3 cut(s) 320, 2065, 2214
BstX2I RGATCY 1 cut(s) 2128
BstYI RGATCY 1 cut(s) 2128
BstZ17I GTATAC 1 cut(s) 1975
BsuI GTATCC 1 cut(s) 1896
BsuRI GGCC 2 cut(s) 489, 514
BtgI CCRYGG 1 cut(s) 2260
BtsCI GGATG 4 cut(s) 141, 1958, 1975, 2105
BtsI GCAGTG 1 cut(s) 1731
BtsIMutI CAGTG 4 cut(s) 1528, 1731, 2040, 2282
Cac8I GCNNGC 2 cut(s) 31, 738
CaiI CAGNNNCTG 1 cut(s) 789
CfoI GCGC 1 cut(s) 171
Cfr10I RCCGGY 2 cut(s) 29, 1249
Cfr13I GGNCC 2 cut(s) 488, 513
CseI GACGC 1 cut(s) 1084
CsiI ACCWGGT 1 cut(s) 10
Csp6I GTAC 5 cut(s) 967, 1036, 1335, 1566, 1651
CspCI CAANNNNNGTGG 2 cut(s) 2013, 2048
CviAII CATG 7 cut(s) 230, 732, 764, 1654, 1661, 1691, 2230
CviQI GTAC 5 cut(s) 967, 1036, 1335, 1566, 1651
DdeI CTNAG 8 cut(s) 470, 492, 1124, 1410, 1520, 1618, 1880, 2274
DpnI GATC 7 cut(s) 801, 1212, 1236, 1494, 1598, 2123, 2130
DpnII GATC 7 cut(s) 799, 1210, 1234, 1492, 1596, 2121, 2128
DraIII CACNNNGTG 1 cut(s) 14
DrdI GACNNNNNNGTC 1 cut(s) 155
DseDI GACNNNNNNGTC 1 cut(s) 155
Eam1104I CTCTTC 2 cut(s) 1703, 1755
EarI CTCTTC 2 cut(s) 1703, 1755
Ecl136II GAGCTC 2 cut(s) 1414, 1879
Eco130I CCWWGG 4 cut(s) 588, 1134, 1180, 1668
Eco24I GRGCYC 3 cut(s) 1416, 1854, 1881
Eco31I GGTCTC 1 cut(s) 870
Eco32I GATATC 1 cut(s) 839
Eco47III AGCGCT 1 cut(s) 170
Eco53kI GAGCTC 2 cut(s) 1414, 1879
Eco57I CTGAAG 2 cut(s) 332, 1193
Eco88I CYCGRG 1 cut(s) 1214
Eco91I GGTNACC 1 cut(s) 2005
EcoICRI GAGCTC 2 cut(s) 1414, 1879
EcoO65I GGTNACC 1 cut(s) 2005
EcoRI GAATTC 1 cut(s) 1885
EcoRII CCWGG 3 cut(s) 10, 709, 832
EcoRV GATATC 1 cut(s) 839
EcoT14I CCWWGG 4 cut(s) 588, 1134, 1180, 1668
EcoT38I GRGCYC 3 cut(s) 1416, 1854, 1881
ErhI CCWWGG 4 cut(s) 588, 1134, 1180, 1668
FaeI CATG 7 cut(s) 233, 735, 767, 1657, 1664, 1694, 2233
FalI AAGNNNNNCTT 2 cut(s) 538, 570
FatI CATG 7 cut(s) 229, 731, 763, 1653, 1660, 1690, 2229
FauI CCCGC 1 cut(s) 1422
FauNDI CATATG 2 cut(s) 526, 1587
FbaI TGATCA 1 cut(s) 1492
FblI GTMKAC 3 cut(s) 507, 551, 1974
Fnu4HI GCNGC 4 cut(s) 219, 793, 1506, 1517
FokI GGATG 4 cut(s) 148, 1945, 1982, 2092
FriOI GRGCYC 3 cut(s) 1416, 1854, 1881
Fsp4HI GCNGC 4 cut(s) 219, 793, 1506, 1517
FspBI CTAG 4 cut(s) 501, 1553, 1563, 1745
GlaI GCGC 1 cut(s) 170
GluI GCNGC 4 cut(s) 219, 793, 1506, 1517
GsaI CCCAGC 1 cut(s) 538
HaeII RGCGCY 1 cut(s) 172
HaeIII GGCC 2 cut(s) 489, 514
HapII CCGG 7 cut(s) 30, 288, 432, 1250, 1386, 1931, 2010
HgaI GACGC 1 cut(s) 1084
HhaI GCGC 1 cut(s) 171
Hin1II CATG 7 cut(s) 233, 735, 767, 1657, 1664, 1694, 2233
Hin6I GCGC 1 cut(s) 169
HinP1I GCGC 1 cut(s) 169
HincII GTYRAC 3 cut(s) 160, 878, 2181
HindII GTYRAC 3 cut(s) 160, 878, 2181
HindIII AAGCTT 1 cut(s) 1891
HpaI GTTAAC 1 cut(s) 2181
HpaII CCGG 7 cut(s) 30, 288, 432, 1250, 1386, 1931, 2010
Hpy166II GTNNAC 9 cut(s) 160, 508, 552, 878, 1038, 1091, 1474, 1975, 2181
Hpy188I TCNGA 8 cut(s) 312, 610, 618, 748, 843, 1125, 1621, 2117
Hpy8I GTNNAC 9 cut(s) 160, 508, 552, 878, 1038, 1091, 1474, 1975, 2181
HpyAV CCTTC 9 cut(s) 313, 371, 476, 839, 899, 1382, 1570, 1620, 2138
HpyCH4III ACNGT 2 cut(s) 1812, 2185
HpyCH4IV ACGT 1 cut(s) 1040
HpyF10VI GCNNNNNNNGC 3 cut(s) 175, 792, 1535
HpyF3I CTNAG 8 cut(s) 470, 492, 1124, 1410, 1520, 1618, 1880, 2274
HpySE526I ACGT 1 cut(s) 1040
Hsp92II CATG 7 cut(s) 233, 735, 767, 1657, 1664, 1694, 2233
HspAI GCGC 1 cut(s) 169
Kpn2I TCCGGA 1 cut(s) 1930
KroI GCCGGC 1 cut(s) 29
KroNI GCCGGC 1 cut(s) 31
Ksp22I TGATCA 1 cut(s) 1492
KspAI GTTAAC 1 cut(s) 2181
Kzo9I GATC 7 cut(s) 799, 1210, 1234, 1492, 1596, 2121, 2128
LmnI GCTCC 4 cut(s) 776, 1457, 1657, 1933
Lsp1109I GCAGC 4 cut(s) 205, 804, 1503, 1517
LweI GCATC 4 cut(s) 205, 992, 2114, 2238
MabI ACCWGGT 1 cut(s) 10
MaeI CTAG 4 cut(s) 501, 1553, 1563, 1745
MaeII ACGT 1 cut(s) 1040
MaeIII GTNAC 5 cut(s) 146, 950, 1112, 1919, 2005
MalI GATC 7 cut(s) 801, 1212, 1236, 1494, 1598, 2123, 2130
MboI GATC 7 cut(s) 799, 1210, 1234, 1492, 1596, 2121, 2128
MflI RGATCY 1 cut(s) 2128
MhlI GDGCHC 3 cut(s) 1416, 1854, 1881
MlyI GAGTC 6 cut(s) 278, 338, 920, 1248, 1811, 2242
MmeI TCCRAC 3 cut(s) 397, 949, 1794
MroI TCCGGA 1 cut(s) 1930
MroNI GCCGGC 1 cut(s) 29
MroXI GAANNNNTTC 1 cut(s) 1359
MseI TTAA 7 cut(s) 209, 272, 306, 1230, 1512, 1866, 2180
MslI CAYNNNNRTG 1 cut(s) 1788
MspI CCGG 7 cut(s) 30, 288, 432, 1250, 1386, 1931, 2010
MspR9I CCNGG 4 cut(s) 12, 711, 834, 1387
MvaI CCWGG 3 cut(s) 12, 711, 834
MvnI CGCG 1 cut(s) 1429
MwoI GCNNNNNNNGC 3 cut(s) 175, 792, 1535
NaeI GCCGGC 1 cut(s) 31
NciI CCSGG 1 cut(s) 1387
NdeI CATATG 2 cut(s) 526, 1587
NdeII GATC 7 cut(s) 799, 1210, 1234, 1492, 1596, 2121, 2128
NgoMIV GCCGGC 1 cut(s) 29
NlaIII CATG 7 cut(s) 233, 735, 767, 1657, 1664, 1694, 2233
NlaIV GGNNCC 2 cut(s) 1666, 1912
NmuCI GTSAC 2 cut(s) 146, 2005
PaeR7I CTCGAG 1 cut(s) 1214
PdiI GCCGGC 1 cut(s) 31
PdmI GAANNNNTTC 1 cut(s) 1359
PfeI GAWTC 8 cut(s) 584, 760, 1046, 1582, 1861, 2112, 2216, 2270
PfoI TCCNGGA 1 cut(s) 832
PkrI GCNGC 4 cut(s) 220, 794, 1507, 1518
PleI GAGTC 6 cut(s) 278, 338, 919, 1247, 1811, 2241
PpsI GAGTC 6 cut(s) 278, 338, 919, 1247, 1811, 2241
PsiI TTATAA 2 cut(s) 960, 1059
Psp124BI GAGCTC 2 cut(s) 1416, 1881
Psp6I CCWGG 3 cut(s) 10, 709, 832
PspEI GGTNACC 1 cut(s) 2005
PspFI CCCAGC 1 cut(s) 534
PspGI CCWGG 3 cut(s) 10, 709, 832
PspN4I GGNNCC 2 cut(s) 1666, 1912
PspPI GGNCC 2 cut(s) 488, 513
PstI CTGCAG 1 cut(s) 794
PstNI CAGNNNCTG 1 cut(s) 789
PsuI RGATCY 1 cut(s) 2128
RsaI GTAC 5 cut(s) 968, 1037, 1336, 1567, 1652
RsaNI GTAC 5 cut(s) 967, 1036, 1335, 1566, 1651
RseI CAYNNNNRTG 1 cut(s) 1788
SacI GAGCTC 2 cut(s) 1416, 1881
SaqAI TTAA 7 cut(s) 209, 272, 306, 1230, 1512, 1866, 2180
SatI GCNGC 4 cut(s) 219, 793, 1506, 1517
Sau3AI GATC 7 cut(s) 799, 1210, 1234, 1492, 1596, 2121, 2128
Sau96I GGNCC 2 cut(s) 488, 513
ScaI AGTACT 1 cut(s) 1567
SchI GAGTC 6 cut(s) 278, 338, 920, 1248, 1811, 2242
ScrFI CCNGG 4 cut(s) 12, 711, 834, 1387
SduI GDGCHC 3 cut(s) 1416, 1854, 1881
SexAI ACCWGGT 1 cut(s) 10
SfaNI GCATC 4 cut(s) 205, 992, 2114, 2238
SfcI CTRYAG 2 cut(s) 126, 790
Sfr274I CTCGAG 1 cut(s) 1214
SlaI CTCGAG 1 cut(s) 1214
SmiMI CAYNNNNRTG 1 cut(s) 1788
SmlI CTYRAG 3 cut(s) 1107, 1214, 1415
SmoI CTYRAG 3 cut(s) 1107, 1214, 1415
SsiI CCGC 3 cut(s) 27, 390, 1429
SspMI CTAG 4 cut(s) 501, 1553, 1563, 1745
SstI GAGCTC 2 cut(s) 1416, 1881
StyD4I CCNGG 4 cut(s) 10, 709, 832, 1385
StyI CCWWGG 4 cut(s) 588, 1134, 1180, 1668
TaaI ACNGT 2 cut(s) 1812, 2185
TaiI ACGT 1 cut(s) 1043
TaqI TCGA 6 cut(s) 453, 688, 1215, 1237, 1599, 1898
TatI WGTACW 4 cut(s) 1035, 1334, 1565, 1650
TfiI GAWTC 8 cut(s) 584, 760, 1046, 1582, 1861, 2112, 2216, 2270
Tru1I TTAA 7 cut(s) 209, 272, 306, 1230, 1512, 1866, 2180
Tru9I TTAA 7 cut(s) 209, 272, 306, 1230, 1512, 1866, 2180
TscAI CASTG 4 cut(s) 1528, 1738, 2047, 2282
TseFI GTSAC 2 cut(s) 146, 2005
TseI GCWGC 4 cut(s) 218, 792, 1505, 1516
Tsp45I GTSAC 2 cut(s) 146, 2005
TspDTI ATGAA 5 cut(s) 26, 720, 752, 1368, 1604
TspRI CASTG 4 cut(s) 1528, 1738, 2047, 2282
XapI RAATTY 5 cut(s) 768, 1256, 1547, 1885, 2172
XcmI CCANNNNNNNNNTGG 1 cut(s) 717
XhoI CTCGAG 1 cut(s) 1214
XmiI GTMKAC 3 cut(s) 507, 551, 1974
XmnI GAANNNNTTC 1 cut(s) 1359
XspI CTAG 4 cut(s) 501, 1553, 1563, 1745
ZrmI AGTACT 1 cut(s) 1567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.