Rh3BG284900

Receptor protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
28326127 .. 28340780
14654 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG284900.1

Sequence Viewer

Length: 3000 bp
ATGGATCCTCTGTTTCTCATTCTACTTCTCTCTCTGGCCATCACTTCTCCAACTTCATCTTCAACCTCCGACGCATTGACTGAAGGGTCATCCCTCTCTGTAGAGAAACCAGAAGATGTCCTGATTTCACCTGGTGGTGTTTTCACCGCCGGCTTTCATCAAGTTGGCAACAATTCATATTGCTTTGCCATTTGGTTCAGCGAGCCATCATCAACGTCATCACCAGTCTCCTACCAGAACCGAACTATAGTCTGGATGGCAAATCGTGACCAACCAGTCAACGGGAAGCGCTCAAAGCTCTCCCTCCTCAAAACTGGTAATCTCATCTTAACTGATGCTGCTCAATCCCATGTTTGGACTACAACCACCACCTCAATCTTCCCTGCCCGTTTAAGCCTCCACGACTCCGGTAATCTGGTTCTGCTTAATCTGAAGACGAAGGTTGTTCTATGGCAGAGCTTTGACTCCCCAACTGATACCCTTCTTCCACTCCAACCATTCACCAGAACCGCCATACTTGTCTCCTCCAGAAGCCAGAGCAACTTCTCCTCTGACTTCTATAAGCTCTTTTTCGACAATGATAACCTTCTCCGGCTACTCTTTGACGGCCCTGAGATTTCTAGTGTCTACTGGCCCAACCCTGCATATGTGAGCTGGGATAATGCAAGGTCTACTTACAACAGCAGTAGAACTGCCGTGCTTGATTCCTTAGGCAGTTTTGCCTCTTCGGACAATCTGACTTTTCTTGCAGCTGATTATGGTGCAAAGTTGCAGAGAAGATTGACTATTGATTTTGATGGAAATGTTCGATTGTATAGCCGAAAAATGCCAGGAGAGAGTTGGGTGGTTTCATGGCAAGCCTTTTCAGACCCTTGTGTGATTCATGGAATTTGTGGAGTTAACAGCCTCTGCAGCTACGATCCCAGTTCTGGGAGGAAATGCTCTTGCCTTCCAGGATATCAGATGGAAAATCATACTGATTGGTCTTTGGGGTGTCAACCGGAGTTTCAATTCTCTTATGTAGAAGGTGAGTCTCGTTTTCTCCAACTTACGCAAGTTGAGTTCTATGGTTACGATTATAATGAGTACCAAAATTATAGCTATGGTGATTGTGAAAAAAGATGCTTGGAACTGGATAACTGCAAGGGGTTTCAGTACACGTTTGATTCTGGTGTTTATAAGTGTAATCCCAAGACGCAGTTGCGAAGTGGGCACAGGTGGAACACTCAAGGTTACTTCTATCTGAGACTGCCAAAGGCTCACCTCTTTTCTAACACAGACATAAAGCCCCTGAAGAACCTTGGTTTTAGTTGCACAGAAAAAGTTGTTGATCTCGAGAGGGAGTATGTTAAAGATCGAGTCAGTAAGCCGGTGAAATTCCTGCTCTGTGAGCCATTTGACCACTACAAAAACAGAACCATAGTCTGGATGGCCAACCGTGACCAACCAGTCAATGGCAAACACTCAAAGCTCTCCCTCCTCAAAACTGGTGATCTCATCTTAACCGACGCTGGTCAATCCATTGTTTGGTCCACAGCCACCACTTCAGTCTCACAGGCGAACTTAAGCCTCCACAATTCCGGCAATCTTGTTTTGCTAAACTCGGAGCATGTCATTCTATGGCAGAGCTTTGATCACCCTACTGATACTCTTCTTCCAGACCAACCACTCACCAGAAGCACAATCCTTGTCTCCATGAGAAGCCCGAGCAACTACTCCTCTGGCTTCTACAAGCTCTTCTTTGACAATGACAACCTTCTCCGGCTACTCTTCGACGGTCTTGAGATTTCAAGTGTGTATTGGTTTGAGCCATGGCAAACAGGCCGAACAGCCAGAAGGTCCAAAGACAACAACAGTAGAGTTGCCGTGATGGATTCCTTAGGCAAGTTTACTTCATCAGACAAATATACTTTGATCGCTTCCGATTATGGTGCAGCTTCGCAAAGAAGACTGACGGTTGATTGTGATGGAAATGTTCGGTTGCACAGCCGGGCCAAACCAGGAGACAGATGGGTTGTGACAGGGCAGATCATGGAAAATGCTTGTATGATTCATGGGGTTTGTGGTCCTAATAGTGTGTGTGACTATGAGCCTAGTACTGGAAGAAAATGTTCTTGCATTCCTGGTTACAAAATGGCAAACTATACTGATTGGTATTATGGTTGTGAACCTGAGTTCAATTACACTTGCGGCAGAGGTGAGTCCAGTTTCTTCAAGCTTTCGAGGCTCGACTTTTACGGGTATGATTACGGATACTTCCCCAACTACACATTCATGCAGTGTGAGGATCTCTGTTTGCAGCTGTGTAACTGCAAGGGTTTCCAATACTGTCCCCGCAGTAGAATATATGGCTGTTATCCGAAAACGGTGTTGCTCAATGGATACAGGTCTCCAAGCTCTTCTAAAGACATATATTTGAGAGTGCCAAAGATCCATCTGTCATCTTATGGATTGCCACAAGAAGAATTTAGGTTGCGTTGCTTAGATAAGGTGGTTGAGCTAGATAGGAGCTATGAGAAGAGCCATGTAACTGGTCTAGAGAAATTTTTGCTGTGGTTTGCCTGTGGAGTTGGAGGGTTTGAGATCATTTGTATACTTTTGGTTTTGGGTCTAATAACTCAAAATCGGAGAGATTCCAATGAGGATAAGCACGGCTACCTTCTTGCTGCAACTGGATTCAAAAGCTATGGGGTTGTGGTGTTGGAGATGGTGACCGGAAAGAACCCGATAAAGCCGGATGTGGATGCCATTGATGGCGAGCAGAGAAGGCTGATCATGTGGGTGAGGAAGAAATTACATAATGGAACTTCTGCTAGTGAAATTGAAGCTCGGATAGGAGACGTCATAGACCCTTCGTTTGAAGGTAAATATGATGTAAAAAAGATGGGGATTCTGTTGGAAGTGGCTTTACAATGCGTAGAGGAAGACAGAGACGCGAGACCAACTATGAGCCAAGTCGTTGAGATGCTTGTGCTGCTTGACAAAGACCAAGAGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

999

Amino Acids

113.08

Weight (kDa)

6.37

Isoelectric Point (pI)

46.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 82 - 167 5.1e-23 D-mannose binding lectin
S_locus_glycop PF00954 254 - 323 1.4e-07 S-locus glycoprotein domain
B_lectin PF01453 473 - 559 1.1e-24 D-mannose binding lectin
S_locus_glycop PF00954 644 - 712 9.3e-08 S-locus glycoprotein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1080, 1179
AasI GACNNNNNNGTC 3 cut(s) 85, 275, 1448
AatII GACGTC 1 cut(s) 2844
AccB7I CCANNNNNTGG 3 cut(s) 1425, 1454, 1527
AccI GTMKAC 3 cut(s) 627, 671, 2593
AccII CGCG 1 cut(s) 2936
AciI CCGC 4 cut(s) 147, 510, 2190, 2335
AclWI GGATC 4 cut(s) 12, 914, 2295, 2425
AcoI YGGCCR 2 cut(s) 36, 1431
AcsI RAATTY 4 cut(s) 888, 1376, 2465, 2543
AcuI CTGAAG 4 cut(s) 102, 452, 1313, 1530
AcyI GRCGYC 1 cut(s) 2841
AdeI CACNNNGTG 1 cut(s) 134
AfaI GTAC 3 cut(s) 1088, 1157, 2098
AfeI AGCGCT 1 cut(s) 290
AfiI CCNNNNNNNGG 8 cut(s) 281, 354, 929, 930, 1425, 1454, 1527, 2099
AflII CTTAAG 1 cut(s) 1564
AflIII ACRYGT 1 cut(s) 1158
AgsI TTSAA 8 cut(s) 63, 1010, 1791, 2179, 2215, 2680, 2825, 2861
AjnI CCWGG 5 cut(s) 130, 829, 952, 1999, 2122
AjuI GAANNNNNNNTTGG 4 cut(s) 43, 75, 2255, 2287
AlwI GGATC 4 cut(s) 12, 914, 2295, 2425
AlwNI CAGNNNCTG 1 cut(s) 909
Ama87I CYCGRG 2 cut(s) 1334, 1705
Aor51HI AGCGCT 1 cut(s) 290
AoxI GGCC 6 cut(s) 36, 607, 632, 1431, 1822, 1992
ApeKI GCWGC 7 cut(s) 338, 749, 912, 1934, 2299, 2666, 2974
ApoI RAATTY 4 cut(s) 888, 1376, 2465, 2543
ArsI GACNNNNNNTTYG 2 cut(s) 2840, 2872
Asp700I GAANNNNTTC 1 cut(s) 2110
AspLEI GCGC 1 cut(s) 291
AspS9I GGNCC 6 cut(s) 608, 633, 1530, 1839, 1992, 2066
AsuC2I CCSGG 1 cut(s) 1991
AvaI CYCGRG 2 cut(s) 1334, 1705
AvaII GGWCC 3 cut(s) 1530, 1839, 2066
AxyI CCTNAGG 2 cut(s) 709, 1879
BaeGI GKGCMC 1 cut(s) 1215
BalI TGGCCA 2 cut(s) 38, 1433
BamHI GGATCC 1 cut(s) 4
BarI GAAGNNNNNNTAC 2 cut(s) 2892, 2924
BbsI GAAGAC 3 cut(s) 440, 1954, 2931
BbvI GCAGC 7 cut(s) 325, 761, 924, 1946, 2311, 2653, 2961
BceAI ACGGC 4 cut(s) 622, 680, 1850, 2668
BcgI CGANNNNNNTGC 2 cut(s) 1913, 1947
BciT130I CCWGG 5 cut(s) 132, 831, 954, 2001, 2124
BciVI GTATCC 2 cut(s) 2246, 2375
BclI TGATCA 2 cut(s) 1633, 2772
BcnI CCSGG 1 cut(s) 1991
BfaI CTAG 5 cut(s) 621, 2094, 2501, 2537, 2814
BfmI CTRYAG 3 cut(s) 99, 246, 910
BfoI RGCGCY 1 cut(s) 292
BfrI CTTAAG 1 cut(s) 1564
BfuI GTATCC 2 cut(s) 2246, 2375
BisI GCNGC 8 cut(s) 339, 750, 913, 1935, 2191, 2300, 2667, 2975
BlsI GCNGC 8 cut(s) 340, 751, 914, 1936, 2192, 2301, 2668, 2976
BmcAI AGTACT 1 cut(s) 2098
Bme1390I CCNGG 6 cut(s) 132, 831, 954, 1991, 2001, 2124
Bme18I GGWCC 3 cut(s) 1530, 1839, 2066
BmeT110I CYCGRG 2 cut(s) 1334, 1705
BmgT120I GGNCC 6 cut(s) 608, 633, 1530, 1839, 1992, 2066
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 6 cut(s) 132, 831, 954, 1991, 2001, 2124
BmrI ACTGGG 1 cut(s) 918
BmsI GCATC 4 cut(s) 325, 1112, 2734, 2955
BmuI ACTGGG 1 cut(s) 918
BoxI GACNNNNGTC 1 cut(s) 1512
BpiI GAAGAC 3 cut(s) 440, 1954, 2931
BpmI CTGGAG 1 cut(s) 511
BpuEI CTTGAG 2 cut(s) 1212, 1802
BpuMI CCSGG 1 cut(s) 1991
BsaHI GRCGYC 1 cut(s) 2841
BsaI GGTCTC 2 cut(s) 2394, 2932
BsaJI CCNNGG 2 cut(s) 1300, 1811
BsaWI WCCGGW 3 cut(s) 407, 1000, 2714
Bsc4I CCNNNNNNNGG 8 cut(s) 281, 354, 929, 930, 1425, 1454, 1527, 2099
Bse118I RCCGGY 2 cut(s) 149, 1369
Bse21I CCTNAGG 2 cut(s) 709, 1879
BseBI CCWGG 5 cut(s) 132, 831, 954, 2001, 2124
BseDI CCNNGG 2 cut(s) 1300, 1811
BseGI GGATG 5 cut(s) 89, 261, 1434, 2743, 2749
BseLI CCNNNNNNNGG 8 cut(s) 281, 354, 929, 930, 1425, 1454, 1527, 2099
BseMII CTCAG 3 cut(s) 603, 1235, 2163
BseRI GAGGAG 5 cut(s) 296, 514, 538, 1469, 1708
BseSI GKGCMC 1 cut(s) 1215
BseXI GCAGC 7 cut(s) 325, 761, 924, 1946, 2311, 2653, 2961
BseYI CCCAGC 1 cut(s) 654
BsgI GTGCAG 1 cut(s) 1953
Bsh1236I CGCG 1 cut(s) 2936
BshFI GGCC 6 cut(s) 38, 609, 634, 1433, 1824, 1994
BsiHKCI CYCGRG 2 cut(s) 1334, 1705
BslFI GGGAC 1 cut(s) 2316
BslI CCNNNNNNNGG 8 cut(s) 281, 354, 929, 930, 1425, 1454, 1527, 2099
BsmBI CGTCTC 2 cut(s) 2832, 2925
BsmFI GGGAC 1 cut(s) 2316
BsmI GAATGC 1 cut(s) 2118
BsnI GGCC 6 cut(s) 38, 609, 634, 1433, 1824, 1994
Bso31I GGTCTC 2 cut(s) 2394, 2932
BsoBI CYCGRG 2 cut(s) 1334, 1705
Bsp1286I GDGCHC 1 cut(s) 1215
Bsp19I CCATGG 1 cut(s) 1811
BspACI CCGC 4 cut(s) 147, 510, 2190, 2335
BspANI GGCC 6 cut(s) 38, 609, 634, 1433, 1824, 1994
BspCNI CTCAG 3 cut(s) 604, 1236, 2164
BspFNI CGCG 1 cut(s) 2936
BspLI GGNNCC 1 cut(s) 6
BspMAI CTGCAG 1 cut(s) 914
BspPI GGATC 4 cut(s) 12, 914, 2295, 2425
BspQI GCTCTTC 3 cut(s) 1742, 2404, 2513
BspTI CTTAAG 1 cut(s) 1564
BspTNI GGTCTC 2 cut(s) 2394, 2932
BsrFI RCCGGY 2 cut(s) 149, 1369
BssAI RCCGGY 2 cut(s) 149, 1369
BssECI CCNNGG 2 cut(s) 1300, 1811
BssNAI GTATAC 1 cut(s) 2594
BssNI GRCGYC 1 cut(s) 2841
BssT1I CCWWGG 2 cut(s) 1300, 1811
Bst1107I GTATAC 1 cut(s) 2594
Bst2UI CCWGG 5 cut(s) 132, 831, 954, 2001, 2124
Bst4CI ACNGT 6 cut(s) 1439, 1778, 1856, 1957, 2330, 2368
Bst6I CTCTTC 6 cut(s) 730, 1656, 1742, 1775, 2404, 2513
BstACI GRCGYC 1 cut(s) 2841
BstAFI CTTAAG 1 cut(s) 1564
BstC8I GCNNGC 4 cut(s) 151, 203, 858, 2759
BstDEI CTNAG 6 cut(s) 612, 709, 1244, 1879, 2172, 2482
BstDSI CCRYGG 1 cut(s) 1811
BstEII GGTNACC 1 cut(s) 2710
BstF5I GGATG 5 cut(s) 89, 261, 1434, 2743, 2749
BstFNI CGCG 1 cut(s) 2936
BstH2I RGCGCY 1 cut(s) 292
BstHHI GCGC 1 cut(s) 291
BstMWI GCNNNNNNNGC 7 cut(s) 295, 912, 1210, 1390, 2224, 2767, 2974
BstNI CCWGG 5 cut(s) 132, 831, 954, 2001, 2124
BstNSI RCATGY 1 cut(s) 1613
BstPAI GACNNNNGTC 1 cut(s) 1512
BstPI GGTNACC 1 cut(s) 2710
BstSCI CCNGG 6 cut(s) 130, 829, 952, 1989, 1999, 2122
BstSFI CTRYAG 3 cut(s) 99, 246, 910
BstSLI GKGCMC 1 cut(s) 1215
BstUI CGCG 1 cut(s) 2936
BstV1I GCAGC 7 cut(s) 325, 761, 924, 1946, 2311, 2653, 2961
BstV2I GAAGAC 3 cut(s) 440, 1954, 2931
BstX2I RGATCY 3 cut(s) 4, 2287, 2430
BstXI CCANNNNNNTGG 1 cut(s) 2531
BstYI RGATCY 3 cut(s) 4, 2287, 2430
BstZ17I GTATAC 1 cut(s) 2594
Bsu36I CCTNAGG 2 cut(s) 709, 1879
BsuI GTATCC 2 cut(s) 2246, 2375
BsuRI GGCC 6 cut(s) 38, 609, 634, 1433, 1824, 1994
BtgI CCRYGG 1 cut(s) 1811
BtsCI GGATG 5 cut(s) 89, 261, 1434, 2743, 2749
BtsI GCAGTG 1 cut(s) 2285
BtsIMutI CAGTG 1 cut(s) 2285
Cac8I GCNNGC 4 cut(s) 151, 203, 858, 2759
CaiI CAGNNNCTG 1 cut(s) 909
CfoI GCGC 1 cut(s) 291
Cfr10I RCCGGY 2 cut(s) 149, 1369
Cfr13I GGNCC 6 cut(s) 608, 633, 1530, 1839, 1992, 2066
CseI GACGC 4 cut(s) 80, 1204, 1517, 2942
CsiI ACCWGGT 1 cut(s) 130
Csp6I GTAC 3 cut(s) 1087, 1156, 2097
CviQI GTAC 3 cut(s) 1087, 1156, 2097
DdeI CTNAG 6 cut(s) 612, 709, 1244, 1879, 2172, 2482
DraIII CACNNNGTG 1 cut(s) 134
DrdI GACNNNNNNGTC 3 cut(s) 85, 275, 1448
DseDI GACNNNNNNGTC 3 cut(s) 85, 275, 1448
EaeI YGGCCR 2 cut(s) 36, 1431
Eam1104I CTCTTC 6 cut(s) 730, 1656, 1742, 1775, 2404, 2513
EarI CTCTTC 6 cut(s) 730, 1656, 1742, 1775, 2404, 2513
Eco130I CCWWGG 2 cut(s) 1300, 1811
Eco31I GGTCTC 2 cut(s) 2394, 2932
Eco32I GATATC 1 cut(s) 959
Eco47I GGWCC 3 cut(s) 1530, 1839, 2066
Eco47III AGCGCT 1 cut(s) 290
Eco57I CTGAAG 4 cut(s) 102, 452, 1313, 1530
Eco81I CCTNAGG 2 cut(s) 709, 1879
Eco88I CYCGRG 2 cut(s) 1334, 1705
Eco91I GGTNACC 1 cut(s) 2710
EcoO65I GGTNACC 1 cut(s) 2710
EcoRII CCWGG 5 cut(s) 130, 829, 952, 1999, 2122
EcoRV GATATC 1 cut(s) 959
EcoT14I CCWWGG 2 cut(s) 1300, 1811
ErhI CCWWGG 2 cut(s) 1300, 1811
Esp3I CGTCTC 2 cut(s) 2832, 2925
FalI AAGNNNNNCTT 4 cut(s) 658, 690, 1724, 1756
FaqI GGGAC 1 cut(s) 2316
FauI CCCGC 1 cut(s) 2342
FauNDI CATATG 1 cut(s) 646
FbaI TGATCA 2 cut(s) 1633, 2772
FblI GTMKAC 3 cut(s) 627, 671, 2593
Fnu4HI GCNGC 8 cut(s) 339, 750, 913, 1935, 2191, 2300, 2667, 2975
FokI GGATG 5 cut(s) 76, 268, 1441, 2750, 2756
Fsp4HI GCNGC 8 cut(s) 339, 750, 913, 1935, 2191, 2300, 2667, 2975
FspBI CTAG 5 cut(s) 621, 2094, 2501, 2537, 2814
GlaI GCGC 1 cut(s) 290
GluI GCNGC 8 cut(s) 339, 750, 913, 1935, 2191, 2300, 2667, 2975
GsaI CCCAGC 1 cut(s) 658
GsuI CTGGAG 1 cut(s) 511
HaeII RGCGCY 1 cut(s) 292
HaeIII GGCC 6 cut(s) 38, 609, 634, 1433, 1824, 1994
HgaI GACGC 4 cut(s) 80, 1204, 1517, 2942
HhaI GCGC 1 cut(s) 291
Hin1I GRCGYC 1 cut(s) 2841
Hin6I GCGC 1 cut(s) 289
HinP1I GCGC 1 cut(s) 289
HincII GTYRAC 3 cut(s) 280, 901, 998
HindII GTYRAC 3 cut(s) 280, 901, 998
HindIII AAGCTT 1 cut(s) 2216
HpaI GTTAAC 1 cut(s) 901
Hpy99I CGWCG 3 cut(s) 74, 1511, 1778
HpyCH4III ACNGT 6 cut(s) 1439, 1778, 1856, 1957, 2330, 2368
HpyCH4IV ACGT 3 cut(s) 215, 1160, 2841
HpyF10VI GCNNNNNNNGC 7 cut(s) 295, 912, 1210, 1390, 2224, 2767, 2974
HpyF3I CTNAG 6 cut(s) 612, 709, 1244, 1879, 2172, 2482
HpySE526I ACGT 3 cut(s) 215, 1160, 2841
Hsp92I GRCGYC 1 cut(s) 2841
HspAI GCGC 1 cut(s) 289
KroI GCCGGC 1 cut(s) 149
KroNI GCCGGC 1 cut(s) 151
Ksp22I TGATCA 2 cut(s) 1633, 2772
KspAI GTTAAC 1 cut(s) 901
LguI GCTCTTC 3 cut(s) 1742, 2404, 2513
LmnI GCTCC 2 cut(s) 1606, 2508
Lsp1109I GCAGC 7 cut(s) 325, 761, 924, 1946, 2311, 2653, 2961
LweI GCATC 4 cut(s) 325, 1112, 2734, 2955
MabI ACCWGGT 1 cut(s) 130
MaeI CTAG 5 cut(s) 621, 2094, 2501, 2537, 2814
MaeII ACGT 3 cut(s) 215, 1160, 2841
MflI RGATCY 3 cut(s) 4, 2287, 2430
MhlI GDGCHC 1 cut(s) 1215
MlsI TGGCCA 2 cut(s) 38, 1433
MluNI TGGCCA 2 cut(s) 38, 1433
MlyI GAGTC 5 cut(s) 398, 458, 1040, 1368, 2210
MmeI TCCRAC 7 cut(s) 74, 93, 517, 1069, 2551, 2682, 2877
Mox20I TGGCCA 2 cut(s) 38, 1433
MroNI GCCGGC 1 cut(s) 149
MroXI GAANNNNTTC 1 cut(s) 2110
MscI TGGCCA 2 cut(s) 38, 1433
MseI TTAA 7 cut(s) 329, 392, 426, 900, 1350, 1502, 1565
MslI CAYNNNNRTG 2 cut(s) 2273, 2780
Msp20I TGGCCA 2 cut(s) 38, 1433
MspA1I CMGCKG 2 cut(s) 752, 2302
MspCI CTTAAG 1 cut(s) 1564
MspR9I CCNGG 6 cut(s) 132, 831, 954, 1991, 2001, 2124
Mva1269I GAATGC 1 cut(s) 2118
MvaI CCWGG 5 cut(s) 132, 831, 954, 2001, 2124
MvnI CGCG 1 cut(s) 2936
MwoI GCNNNNNNNGC 7 cut(s) 295, 912, 1210, 1390, 2224, 2767, 2974
NaeI GCCGGC 1 cut(s) 151
NciI CCSGG 1 cut(s) 1991
NcoI CCATGG 1 cut(s) 1811
NdeI CATATG 1 cut(s) 646
NgoMIV GCCGGC 1 cut(s) 149
NlaIV GGNNCC 1 cut(s) 6
NmuCI GTSAC 5 cut(s) 266, 1439, 2017, 2081, 2710
NspI RCATGY 1 cut(s) 1613
PaeR7I CTCGAG 1 cut(s) 1334
PciSI GCTCTTC 3 cut(s) 1742, 2404, 2513
PctI GAATGC 1 cut(s) 2118
PdiI GCCGGC 1 cut(s) 151
PdmI GAANNNNTTC 1 cut(s) 2110
PfeI GAWTC 8 cut(s) 704, 880, 1166, 1874, 2050, 2633, 2676, 2890
PflMI CCANNNNNTGG 3 cut(s) 1425, 1454, 1527
PfoI TCCNGGA 1 cut(s) 952
PkrI GCNGC 8 cut(s) 340, 751, 914, 1936, 2192, 2301, 2668, 2976
PleI GAGTC 5 cut(s) 398, 458, 1039, 1367, 2209
PpsI GAGTC 5 cut(s) 398, 458, 1039, 1367, 2209
PshAI GACNNNNGTC 1 cut(s) 1512
PsiI TTATAA 2 cut(s) 1080, 1179
Psp6I CCWGG 5 cut(s) 130, 829, 952, 1999, 2122
PspEI GGTNACC 1 cut(s) 2710
PspFI CCCAGC 1 cut(s) 654
PspGI CCWGG 5 cut(s) 130, 829, 952, 1999, 2122
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 6 cut(s) 608, 633, 1530, 1839, 1992, 2066
PstI CTGCAG 1 cut(s) 914
PstNI CAGNNNCTG 1 cut(s) 909
PsuI RGATCY 3 cut(s) 4, 2287, 2430
PvuII CAGCTG 2 cut(s) 752, 2302
RsaI GTAC 3 cut(s) 1088, 1157, 2098
RsaNI GTAC 3 cut(s) 1087, 1156, 2097
RseI CAYNNNNRTG 2 cut(s) 2273, 2780
SapI GCTCTTC 3 cut(s) 1742, 2404, 2513
SaqAI TTAA 7 cut(s) 329, 392, 426, 900, 1350, 1502, 1565
SatI GCNGC 8 cut(s) 339, 750, 913, 1935, 2191, 2300, 2667, 2975
Sau96I GGNCC 6 cut(s) 608, 633, 1530, 1839, 1992, 2066
ScaI AGTACT 1 cut(s) 2098
SchI GAGTC 5 cut(s) 398, 458, 1040, 1368, 2210
ScrFI CCNGG 6 cut(s) 132, 831, 954, 1991, 2001, 2124
SduI GDGCHC 1 cut(s) 1215
SexAI ACCWGGT 1 cut(s) 130
SfaNI GCATC 4 cut(s) 325, 1112, 2734, 2955
SfcI CTRYAG 3 cut(s) 99, 246, 910
Sfr274I CTCGAG 1 cut(s) 1334
SinI GGWCC 3 cut(s) 1530, 1839, 2066
SlaI CTCGAG 1 cut(s) 1334
SmiMI CAYNNNNRTG 2 cut(s) 2273, 2780
SmlI CTYRAG 4 cut(s) 1227, 1334, 1564, 1781
SmoI CTYRAG 4 cut(s) 1227, 1334, 1564, 1781
SsiI CCGC 4 cut(s) 147, 510, 2190, 2335
SspMI CTAG 5 cut(s) 621, 2094, 2501, 2537, 2814
StyD4I CCNGG 6 cut(s) 130, 829, 952, 1989, 1999, 2122
StyI CCWWGG 2 cut(s) 1300, 1811
TaaI ACNGT 6 cut(s) 1439, 1778, 1856, 1957, 2330, 2368
TaiI ACGT 3 cut(s) 218, 1163, 2844
TaqI TCGA 7 cut(s) 573, 808, 1335, 1357, 1773, 2222, 2229
TatI WGTACW 2 cut(s) 1155, 2096
TauI GCSGC 1 cut(s) 2193
TfiI GAWTC 8 cut(s) 704, 880, 1166, 1874, 2050, 2633, 2676, 2890
Tru1I TTAA 7 cut(s) 329, 392, 426, 900, 1350, 1502, 1565
Tru9I TTAA 7 cut(s) 329, 392, 426, 900, 1350, 1502, 1565
TscAI CASTG 1 cut(s) 2285
TseFI GTSAC 5 cut(s) 266, 1439, 2017, 2081, 2710
TseI GCWGC 7 cut(s) 338, 749, 912, 1934, 2299, 2666, 2974
Tsp45I GTSAC 5 cut(s) 266, 1439, 2017, 2081, 2710
TspDTI ATGAA 8 cut(s) 45, 146, 165, 840, 872, 1884, 2042, 2263
TspGWI ACGGA 1 cut(s) 2265
TspRI CASTG 1 cut(s) 2285
Van91I CCANNNNNTGG 3 cut(s) 1425, 1454, 1527
Vha464I CTTAAG 1 cut(s) 1564
VpaK11BI GGWCC 3 cut(s) 1530, 1839, 2066
XapI RAATTY 4 cut(s) 888, 1376, 2465, 2543
XbaI TCTAGA 1 cut(s) 2536
XceI RCATGY 1 cut(s) 1613
XcmI CCANNNNNNNNNTGG 4 cut(s) 837, 1426, 1451, 2007
XhoI CTCGAG 1 cut(s) 1334
XmiI GTMKAC 3 cut(s) 627, 671, 2593
XmnI GAANNNNTTC 1 cut(s) 2110
XspI CTAG 5 cut(s) 621, 2094, 2501, 2537, 2814
ZraI GACGTC 1 cut(s) 2842
ZrmI AGTACT 1 cut(s) 2098
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.