Rmu_sc0014550.1_g000011

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014550.1
OG0000166
Physical Location & Seq
Forward (+)
18034 .. 20388
2355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014550.1_g000011.1.cds

Sequence Viewer

Length: 2355 bp
atgtttgtattttccctctgttttgcaaccgcaaataccctgaacagaggctcttcgctttcggtgaaaaatgctcattcagacttgctaacttccccagacaaatcatttacgtgtggattctatggggtaccgggtagaaatgcctattggttctccatatggttcacaaattccaaagatcaaaccgttgtttggatggctaacagagacagacccgttggcctggaatccagagtttcgttgcgtcgagatggctccatggtcttgactaatcatgtggatgtcactaccataatctgggagaccggcaccggctccactggtgttgacagagcgcagcttctgaattctggcaaccttgttctgaaagacccaaatggtacaattctgtggcgaagctttgattttcccactgatactctcctcccaaaccaaccatttacaaaaagcagcactctggtatcaaatttaggaagaggaaattttggtgctggatatttcaatttctattttgataatgataatgttttgaagttgatgtataatggtcctgacatttcaagcttgtattggcccgaccttgattatagtgtgtttcagaatggtagaaatgcttacaatagtagtagaattgctgttttagatgaacttggtagtttttcatctagtgatgaactgcagttcagtgctatcgacatgggttcgagagtgaaaaggcggttgacactggattatgatggaaatctaagactttatagtcttaatagctcaacgggattgtgggtgatcacatggcaagctatggcggcgccttgtaaggttcatggaatttgtgggagaaatgggatttgcgtttatactccagcacccaggtgttcatgtcctcctggctatgaagtagccgatgcaagtaacttgaacttgggctgcaagcctaagttcaagcgtacatgctcgaagtcccaagaagagaaatttgtgcagattccgcaagtaaatttctatggatttgatctcaattttagtgtagcaatttcaattgatgattgcagacagctctgcttgggggattgccggtgtgaggcatttagctataggctaaatggggaaggttggtgttacaccaaaagtgctcttttcaatggctacaagtcaccagattttgtgggcagtatatacttgagaatgcctgtgagtttaagtgtgcatacatcaaaaccccaatattccaatgcctctattccatgcaagaccaatggtcctgcaatgtatggcactaccggtaaaagggtgagatgggtatatctgtatagttttgcttttgcagttggtgctgttgagtttctttttatagtatcaggttggtggctacttttcagaagacatggtagtgctgtaactcctgtggaagacggatatcgtgtgatttcaagtcaatttagaaggtttcgcttcaatgagctcaagagtgcaaccaaaaacttccaggaagagctgggaagaggggcttcagggtctgtctataagggtgttctggaggatgaaagagtagtggctgtcaagaaattggcagatattcatcaaggggaagatgtgttttgggcagaagtaagcacaattggcaaaatcaatcacatgaatctagtgagaatttggggattttgctcagaagatgagcacagactactggtttctgagtttgttgaaaatgggtctttggacaagcacttgttcacctcaaatttacttggatggaaagagaggtataaagttgcactagggatagcaaagggcttagcctatcttcaccatgaatgtctggaatgggttatacattgtgacgtgaagcctgaaaatatactcctagacagtgattttgagccaaagattgcagattttgggctagcaaagctaactcagagagataggctcatttcaatgttctctcagattcgaggaacaaaaggttatatggccccggagtgggctatgaaccttcgaattactgcaaaggttgatgtttacagttatggggtgttgatcctggagatagtgaagggcattcgacttacaagttggttgctggaggatattgaagaggagcaagaagcagagcttaccaagtttgtgagggaagccaaaaggaaaattcaacgaggggaagagttgttgatagaggatgttgctgatccaagactagaagggcagttcagcaggaaccaagcagcaaagatggttaaaattggcattgcctgtgtggaggaagataggagcaaaagaccaacaatggattcagtggtaaaaagtttgctagaatgtgaagatgaatcttacattcattcttcacattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

784

Amino Acids

88.49

Weight (kDa)

7.16

Isoelectric Point (pI)

30.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 759
Acc65I GGTACC 1 cut(s) 130
AccB1I GGYRCC 3 cut(s) 130, 311, 811
AccB7I CCANNNNNTGG 1 cut(s) 300
AciI CCGC 4 cut(s) 30, 721, 809, 992
AclWI GGATC 2 cut(s) 2038, 2186
AcuI CTGAAG 1 cut(s) 1497
AcyI GRCGYC 1 cut(s) 812
AfaI GTAC 3 cut(s) 132, 385, 952
AfiI CCNNNNNNNGG 6 cut(s) 195, 300, 1084, 1290, 1986, 1987
AflIII ACRYGT 1 cut(s) 113
AgeI ACCGGT 1 cut(s) 1283
AhdI GACNNNNNGTC 1 cut(s) 1260
AjiI CACGTC 1 cut(s) 1846
AjnI CCWGG 5 cut(s) 225, 872, 889, 1488, 2046
AjuI GAANNNNNNNTTGG 4 cut(s) 133, 165, 2278, 2310
AleI CACNNNNGTG 1 cut(s) 874
Alw21I GWGCWC 3 cut(s) 1138, 1467, 1683
Alw26I GTCTC 2 cut(s) 204, 299
AlwI GGATC 2 cut(s) 2038, 2186
AlwNI CAGNNNCTG 2 cut(s) 346, 1520
AoxI GGCC 3 cut(s) 223, 575, 1977
ApeKI GCWGC 4 cut(s) 340, 453, 930, 2228
ArsI GACNNNNNNTTYG 2 cut(s) 1862, 1894
AsiGI ACCGGT 1 cut(s) 1283
Asp718I GGTACC 1 cut(s) 130
AspLEI GCGC 2 cut(s) 340, 814
AspS9I GGNCC 4 cut(s) 551, 576, 1262, 1978
AsuC2I CCSGG 2 cut(s) 135, 1982
AsuHPI GGTGA 6 cut(s) 76, 799, 1149, 1306, 1729, 1802
AsuII TTCGAA 1 cut(s) 2002
AsuNHI GCTAGC 1 cut(s) 1906
AvaII GGWCC 2 cut(s) 551, 1262
BaeI ACNNNNGTAYC 2 cut(s) 447, 480
BanI GGYRCC 3 cut(s) 130, 311, 811
BanII GRGCYC 1 cut(s) 1467
BbsI GAAGAC 2 cut(s) 1390, 1419
Bbv12I GWGCWC 3 cut(s) 1138, 1467, 1683
BbvI GCAGC 4 cut(s) 352, 465, 917, 2240
BccI CCATC 6 cut(s) 193, 248, 734, 1293, 1749, 2230
BciT130I CCWGG 5 cut(s) 227, 874, 891, 1490, 2048
BclI TGATCA 1 cut(s) 789
BcnI CCSGG 2 cut(s) 135, 1982
BcoDI GTCTC 2 cut(s) 204, 299
BfaI CTAG 7 cut(s) 669, 1646, 1781, 1868, 1907, 2201, 2315
BfmI CTRYAG 2 cut(s) 680, 1096
BfoI RGCGCY 1 cut(s) 815
BisI GCNGC 5 cut(s) 341, 454, 810, 931, 2229
BlpI GCTNAGC 1 cut(s) 1798
BlsI GCNGC 5 cut(s) 342, 455, 811, 932, 2230
Bme1390I CCNGG 7 cut(s) 135, 227, 874, 891, 1490, 1982, 2048
Bme18I GGWCC 2 cut(s) 551, 1262
BmeRI GACNNNNNGTC 1 cut(s) 1260
BmgBI CACGTC 1 cut(s) 1846
BmgT120I GGNCC 4 cut(s) 551, 576, 1262, 1978
BmiI GGNNCC 7 cut(s) 132, 259, 313, 319, 813, 1980, 2222
BmrFI CCNGG 7 cut(s) 135, 227, 874, 891, 1490, 1982, 2048
BmsI GCATC 1 cut(s) 898
BmtI GCTAGC 1 cut(s) 1910
BpiI GAAGAC 2 cut(s) 1390, 1419
BplI GAGNNNNNCTC 2 cut(s) 1917, 1949
BpmI CTGGAG 4 cut(s) 849, 1559, 2069, 2108
Bpu1102I GCTNAGC 1 cut(s) 1798
Bpu14I TTCGAA 1 cut(s) 2002
BpuEI CTTGAG 2 cut(s) 1204, 1451
BpuMI CCSGG 2 cut(s) 135, 1982
BsaAI YACGTR 1 cut(s) 114
BsaBI GATNNNNATC 2 cut(s) 744, 1581
BsaHI GRCGYC 1 cut(s) 812
BsaI GGTCTC 1 cut(s) 299
BsaJI CCNNGG 3 cut(s) 261, 872, 1980
BsaWI WCCGGW 1 cut(s) 1283
Bsc4I CCNNNNNNNGG 6 cut(s) 195, 300, 1084, 1290, 1986, 1987
Bse118I RCCGGY 4 cut(s) 308, 314, 1077, 1283
Bse1I ACTGG 3 cut(s) 328, 735, 1695
Bse3DI GCAATG 2 cut(s) 1275, 2250
Bse8I GATNNNNATC 2 cut(s) 744, 1581
BseBI CCWGG 5 cut(s) 227, 874, 891, 1490, 2048
BseDI CCNNGG 3 cut(s) 261, 872, 1980
BseGI GGATG 5 cut(s) 204, 289, 1549, 1760, 2188
BseJI GATNNNNATC 2 cut(s) 744, 1581
BseLI CCNNNNNNNGG 6 cut(s) 195, 300, 1084, 1290, 1986, 1987
BseMI GCAATG 2 cut(s) 1275, 2250
BseMII CTCAG 4 cut(s) 1683, 1689, 1934, 1964
BseNI ACTGG 3 cut(s) 328, 735, 1695
BseRI GAGGAG 2 cut(s) 416, 2117
BseXI GCAGC 4 cut(s) 352, 465, 917, 2240
BseYI CCCAGC 1 cut(s) 1498
BsgI GTGCAG 1 cut(s) 1004
BshFI GGCC 3 cut(s) 225, 577, 1979
BshNI GGYRCC 3 cut(s) 130, 311, 811
BshTI ACCGGT 1 cut(s) 1283
BsiHKAI GWGCWC 3 cut(s) 1138, 1467, 1683
BsiSI CCGG 6 cut(s) 134, 309, 315, 1078, 1284, 1982
BslFI GGGAC 1 cut(s) 949
BslI CCNNNNNNNGG 6 cut(s) 195, 300, 1084, 1290, 1986, 1987
BsmAI GTCTC 2 cut(s) 204, 299
BsmFI GGGAC 1 cut(s) 949
BsmI GAATGC 2 cut(s) 1194, 2064
BsnI GGCC 3 cut(s) 225, 577, 1979
Bso31I GGTCTC 1 cut(s) 299
Bsp119I TTCGAA 1 cut(s) 2002
Bsp1286I GDGCHC 3 cut(s) 1138, 1467, 1683
Bsp143I GATC 5 cut(s) 181, 789, 1015, 2043, 2191
Bsp1720I GCTNAGC 1 cut(s) 1798
Bsp19I CCATGG 1 cut(s) 261
BspACI CCGC 4 cut(s) 30, 721, 809, 992
BspANI GGCC 3 cut(s) 225, 577, 1979
BspCNI CTCAG 4 cut(s) 1682, 1690, 1933, 1963
BspLI GGNNCC 7 cut(s) 132, 259, 313, 319, 813, 1980, 2222
BspMAI CTGCAG 1 cut(s) 684
BspOI GCTAGC 1 cut(s) 1910
BspPI GGATC 2 cut(s) 2038, 2186
BspQI GCTCTTC 2 cut(s) 58, 1488
BspT104I TTCGAA 1 cut(s) 2002
BspT107I GGYRCC 3 cut(s) 130, 311, 811
BspTNI GGTCTC 1 cut(s) 299
BsrDI GCAATG 2 cut(s) 1275, 2250
BsrFI RCCGGY 4 cut(s) 308, 314, 1077, 1283
BsrI ACTGG 3 cut(s) 328, 735, 1695
BssAI RCCGGY 4 cut(s) 308, 314, 1077, 1283
BssECI CCNNGG 3 cut(s) 261, 872, 1980
BssMI GATC 5 cut(s) 181, 789, 1015, 2043, 2191
BssNI GRCGYC 1 cut(s) 812
BssT1I CCWWGG 1 cut(s) 261
Bst2UI CCWGG 5 cut(s) 227, 874, 891, 1490, 2048
Bst4CI ACNGT 3 cut(s) 190, 1874, 2030
Bst6I CTCTTC 7 cut(s) 58, 472, 966, 1488, 1498, 2094, 2160
BstACI GRCGYC 1 cut(s) 812
BstAPI GCANNNNNTGC 1 cut(s) 1334
BstBAI YACGTR 1 cut(s) 114
BstBI TTCGAA 1 cut(s) 2002
BstC8I GCNNGC 3 cut(s) 801, 935, 1908
BstDEI CTNAG 7 cut(s) 749, 939, 1669, 1698, 1798, 1920, 1950
BstDSI CCRYGG 1 cut(s) 261
BstF5I GGATG 5 cut(s) 204, 289, 1549, 1760, 2188
BstH2I RGCGCY 1 cut(s) 815
BstHHI GCGC 2 cut(s) 340, 814
BstKTI GATC 5 cut(s) 184, 792, 1018, 2046, 2194
BstMAI GTCTC 2 cut(s) 204, 299
BstMBI GATC 5 cut(s) 181, 789, 1015, 2043, 2191
BstMWI GCNNNNNNNGC 5 cut(s) 809, 991, 1334, 1623, 1912
BstNI CCWGG 5 cut(s) 227, 874, 891, 1490, 2048
BstNSI RCATGY 1 cut(s) 957
BstSCI CCNGG 7 cut(s) 133, 225, 872, 889, 1488, 1980, 2046
BstSFI CTRYAG 2 cut(s) 680, 1096
BstV1I GCAGC 4 cut(s) 352, 465, 917, 2240
BstV2I GAAGAC 2 cut(s) 1390, 1419
BsuRI GGCC 3 cut(s) 225, 577, 1979
BtgI CCRYGG 1 cut(s) 261
BtrI CACGTC 1 cut(s) 1846
BtsCI GGATG 5 cut(s) 204, 289, 1549, 1760, 2188
BtsIMutI CAGTG 6 cut(s) 321, 414, 694, 728, 1879, 2304
Cac8I GCNNGC 3 cut(s) 801, 935, 1908
CaiI CAGNNNCTG 2 cut(s) 346, 1520
CfoI GCGC 2 cut(s) 340, 814
Cfr10I RCCGGY 4 cut(s) 308, 314, 1077, 1283
Cfr13I GGNCC 4 cut(s) 551, 576, 1262, 1978
CseI GACGC 1 cut(s) 236
Csp6I GTAC 3 cut(s) 131, 384, 951
CspAI ACCGGT 1 cut(s) 1283
CspCI CAANNNNNGTGG 2 cut(s) 310, 345
CviQI GTAC 3 cut(s) 131, 384, 951
DdeI CTNAG 7 cut(s) 749, 939, 1669, 1698, 1798, 1920, 1950
DinI GGCGCC 1 cut(s) 813
DpnI GATC 5 cut(s) 183, 791, 1017, 2045, 2193
DpnII GATC 5 cut(s) 181, 789, 1015, 2043, 2191
DrdI GACNNNNNNGTC 1 cut(s) 759
DriI GACNNNNNGTC 1 cut(s) 1260
DseDI GACNNNNNNGTC 1 cut(s) 759
Eam1104I CTCTTC 7 cut(s) 58, 472, 966, 1488, 1498, 2094, 2160
Eam1105I GACNNNNNGTC 1 cut(s) 1260
EarI CTCTTC 7 cut(s) 58, 472, 966, 1488, 1498, 2094, 2160
Ecl136II GAGCTC 1 cut(s) 1465
Eco130I CCWWGG 1 cut(s) 261
Eco24I GRGCYC 1 cut(s) 1467
Eco31I GGTCTC 1 cut(s) 299
Eco32I GATATC 1 cut(s) 1421
Eco47I GGWCC 2 cut(s) 551, 1262
Eco53kI GAGCTC 1 cut(s) 1465
Eco57I CTGAAG 1 cut(s) 1497
EcoICRI GAGCTC 1 cut(s) 1465
EcoRI GAATTC 1 cut(s) 349
EcoRII CCWGG 5 cut(s) 225, 872, 889, 1488, 2046
EcoRV GATATC 1 cut(s) 1421
EcoT14I CCWWGG 1 cut(s) 261
EcoT38I GRGCYC 1 cut(s) 1467
EgeI GGCGCC 1 cut(s) 813
EheI GGCGCC 1 cut(s) 813
ErhI CCWWGG 1 cut(s) 261
FalI AAGNNNNNCTT 4 cut(s) 1495, 1527, 2103, 2135
FaqI GGGAC 1 cut(s) 949
FauNDI CATATG 1 cut(s) 161
FbaI TGATCA 1 cut(s) 789
Fnu4HI GCNGC 5 cut(s) 341, 454, 810, 931, 2229
FokI GGATG 5 cut(s) 211, 296, 1556, 1767, 2195
FriOI GRGCYC 1 cut(s) 1467
Fsp4HI GCNGC 5 cut(s) 341, 454, 810, 931, 2229
FspBI CTAG 7 cut(s) 669, 1646, 1781, 1868, 1907, 2201, 2315
GlaI GCGC 2 cut(s) 339, 813
GluI GCNGC 5 cut(s) 341, 454, 810, 931, 2229
GsaI CCCAGC 1 cut(s) 1502
GsuI CTGGAG 4 cut(s) 849, 1559, 2069, 2108
HaeII RGCGCY 1 cut(s) 815
HaeIII GGCC 3 cut(s) 225, 577, 1979
HapII CCGG 6 cut(s) 134, 309, 315, 1078, 1284, 1982
HgaI GACGC 1 cut(s) 236
HhaI GCGC 2 cut(s) 340, 814
Hin1I GRCGYC 1 cut(s) 812
Hin6I GCGC 2 cut(s) 338, 812
HinP1I GCGC 2 cut(s) 338, 812
HincII GTYRAC 2 cut(s) 331, 726
HindII GTYRAC 2 cut(s) 331, 726
HindIII AAGCTT 2 cut(s) 400, 565
HinfI GANTC 7 cut(s) 120, 230, 988, 1642, 1954, 2294, 2330
HpaII CCGG 6 cut(s) 134, 309, 315, 1078, 1284, 1982
HphI GGTGA 6 cut(s) 76, 799, 1149, 1306, 1729, 1802
Hpy166II GTNNAC 5 cut(s) 168, 331, 726, 1737, 2026
Hpy188I TCNGA 9 cut(s) 82, 348, 369, 603, 1382, 1672, 1699, 1923, 1953
Hpy188III TCNNGA 9 cut(s) 234, 251, 268, 554, 708, 1468, 1538, 1564, 1823
Hpy8I GTNNAC 5 cut(s) 168, 331, 726, 1737, 2026
Hpy99I CGWCG 1 cut(s) 252
HpyAV CCTTC 5 cut(s) 1106, 1440, 2009, 2053, 2198
HpyCH4III ACNGT 3 cut(s) 190, 1874, 2030
HpyCH4IV ACGT 2 cut(s) 113, 1845
HpyF10VI GCNNNNNNNGC 5 cut(s) 809, 991, 1334, 1623, 1912
HpyF3I CTNAG 7 cut(s) 749, 939, 1669, 1698, 1798, 1920, 1950
HpySE526I ACGT 2 cut(s) 113, 1845
Hsp92I GRCGYC 1 cut(s) 812
HspAI GCGC 2 cut(s) 338, 812
KasI GGCGCC 1 cut(s) 811
KpnI GGTACC 1 cut(s) 134
Ksp22I TGATCA 1 cut(s) 789
Kzo9I GATC 5 cut(s) 181, 789, 1015, 2043, 2191
LguI GCTCTTC 2 cut(s) 58, 1488
LmnI GCTCC 4 cut(s) 263, 323, 2104, 2274
Lsp1109I GCAGC 4 cut(s) 352, 465, 917, 2240
LweI GCATC 1 cut(s) 898
MaeI CTAG 7 cut(s) 669, 1646, 1781, 1868, 1907, 2201, 2315
MaeII ACGT 2 cut(s) 113, 1845
MaeIII GTNAC 6 cut(s) 286, 914, 1121, 1155, 1399, 1841
MalI GATC 5 cut(s) 183, 791, 1017, 2045, 2193
MboI GATC 5 cut(s) 181, 789, 1015, 2043, 2191
MfeI CAATTG 2 cut(s) 1041, 1620
MhlI GDGCHC 3 cut(s) 1138, 1467, 1683
Mly113I GGCGCC 1 cut(s) 812
MseI TTAA 3 cut(s) 765, 1202, 2241
MslI CAYNNNNRTG 5 cut(s) 112, 282, 874, 1392, 1940
MspI CCGG 6 cut(s) 134, 309, 315, 1078, 1284, 1982
MspR9I CCNGG 7 cut(s) 135, 227, 874, 891, 1490, 1982, 2048
MunI CAATTG 2 cut(s) 1041, 1620
Mva1269I GAATGC 2 cut(s) 1194, 2064
MvaI CCWGG 5 cut(s) 227, 874, 891, 1490, 2048
MwoI GCNNNNNNNGC 5 cut(s) 809, 991, 1334, 1623, 1912
NarI GGCGCC 1 cut(s) 812
NciI CCSGG 2 cut(s) 135, 1982
NcoI CCATGG 1 cut(s) 261
NdeI CATATG 1 cut(s) 161
NdeII GATC 5 cut(s) 181, 789, 1015, 2043, 2191
NheI GCTAGC 1 cut(s) 1906
NlaIV GGNNCC 7 cut(s) 132, 259, 313, 319, 813, 1980, 2222
NmuCI GTSAC 3 cut(s) 286, 1155, 1841
NspI RCATGY 1 cut(s) 957
NspV TTCGAA 1 cut(s) 2002
OliI CACNNNNGTG 1 cut(s) 874
PciSI GCTCTTC 2 cut(s) 58, 1488
PctI GAATGC 2 cut(s) 1194, 2064
PfeI GAWTC 7 cut(s) 120, 230, 988, 1642, 1954, 2294, 2330
PflMI CCANNNNNTGG 1 cut(s) 300
PfoI TCCNGGA 2 cut(s) 1488, 2046
PinAI ACCGGT 1 cut(s) 1283
PkrI GCNGC 5 cut(s) 342, 455, 811, 932, 2230
PluTI GGCGCC 1 cut(s) 815
Ppu21I YACGTR 1 cut(s) 114
Psp124BI GAGCTC 1 cut(s) 1467
Psp6I CCWGG 5 cut(s) 225, 872, 889, 1488, 2046
PspFI CCCAGC 1 cut(s) 1498
PspGI CCWGG 5 cut(s) 225, 872, 889, 1488, 2046
PspN4I GGNNCC 7 cut(s) 132, 259, 313, 319, 813, 1980, 2222
PspPI GGNCC 4 cut(s) 551, 576, 1262, 1978
PstI CTGCAG 1 cut(s) 684
PstNI CAGNNNCTG 2 cut(s) 346, 1520
RsaI GTAC 3 cut(s) 132, 385, 952
RsaNI GTAC 3 cut(s) 131, 384, 951
RseI CAYNNNNRTG 5 cut(s) 112, 282, 874, 1392, 1940
SacI GAGCTC 1 cut(s) 1467
SapI GCTCTTC 2 cut(s) 58, 1488
SaqAI TTAA 3 cut(s) 765, 1202, 2241
SatI GCNGC 5 cut(s) 341, 454, 810, 931, 2229
Sau3AI GATC 5 cut(s) 181, 789, 1015, 2043, 2191
Sau96I GGNCC 4 cut(s) 551, 576, 1262, 1978
ScrFI CCNGG 7 cut(s) 135, 227, 874, 891, 1490, 1982, 2048
SduI GDGCHC 3 cut(s) 1138, 1467, 1683
SfaNI GCATC 1 cut(s) 898
SfcI CTRYAG 2 cut(s) 680, 1096
SfoI GGCGCC 1 cut(s) 813
SfuI TTCGAA 1 cut(s) 2002
SinI GGWCC 2 cut(s) 551, 1262
SmiMI CAYNNNNRTG 5 cut(s) 112, 282, 874, 1392, 1940
SmlI CTYRAG 2 cut(s) 1183, 1466
SmoI CTYRAG 2 cut(s) 1183, 1466
SsiI CCGC 4 cut(s) 30, 721, 809, 992
SspDI GGCGCC 1 cut(s) 811
SspI AATATT 1 cut(s) 1229
SspMI CTAG 7 cut(s) 669, 1646, 1781, 1868, 1907, 2201, 2315
SstI GAGCTC 1 cut(s) 1467
StyD4I CCNGG 7 cut(s) 133, 225, 872, 889, 1488, 1980, 2046
StyI CCWWGG 1 cut(s) 261
TaaI ACNGT 3 cut(s) 190, 1874, 2030
TaiI ACGT 2 cut(s) 116, 1848
TaqI TCGA 7 cut(s) 250, 696, 707, 959, 1957, 2002, 2068
TauI GCSGC 1 cut(s) 812
TfiI GAWTC 7 cut(s) 120, 230, 988, 1642, 1954, 2294, 2330
Tru1I TTAA 3 cut(s) 765, 1202, 2241
Tru9I TTAA 3 cut(s) 765, 1202, 2241
TscAI CASTG 6 cut(s) 328, 421, 694, 735, 1879, 2304
TseFI GTSAC 3 cut(s) 286, 1155, 1841
TseI GCWGC 4 cut(s) 340, 453, 930, 2228
Tsp45I GTSAC 3 cut(s) 286, 1155, 1841
TspGWI ACGGA 1 cut(s) 1431
TspRI CASTG 6 cut(s) 328, 421, 694, 735, 1879, 2304
Van91I CCANNNNNTGG 1 cut(s) 300
VpaK11BI GGWCC 2 cut(s) 551, 1262
XceI RCATGY 1 cut(s) 957
XspI CTAG 7 cut(s) 669, 1646, 1781, 1868, 1907, 2201, 2315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.