Rh3DG139800

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000166
Physical Location & Seq
Reverse (-)
11928672 .. 11934127
5456 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG139800.1

Sequence Viewer

Length: 1698 bp
ATGAAGTGCAGAGCTTTTTCAGTCTCCTTTCTATGTCTTCTCTGTTTTGCAACTGCAAAAACCCAAAGTAGTCTAAAGAGAGGATCTTCTCTTTCAGTGGAGGATGATTCAGATTTCCTAACCTCACCAGACAAGTCTTTCACGTGTGGGTTTCATGGGGTTGGCACAAATGCCTACTGGTTCTCAATTTGGTTCACAAGCTCAAAAGACAGGACCATTGTTTGGATGGCCAACAGGGACAAGCCAGTCAATGGCTTGGGGTCTAGAGTCTATCTGAGCCGAGATGGCTCGATGGTCTTGACTGATGTAGATGGAGCCATCATCTGGAAGAGCAGCACCAACTCGAGTACCAATACTGTTGCTGAAAGAGCTGAGCTTTTGGATTCTGGCAACCTTGTTCTGAAGGACCCTAGTGGTAAAATTCTATGGCAAAGCTTTGATTTTCCTACTGATACTTTGCTCCCAAACCAGCACTTTAGAAAGAGCAATAAGTTGATTTCTAATTTGGGAAGAGGGGATTTTGGTACTGGCTATTTTAGTTTCTATTTTGATAATGATAATGTTTTGAAGTTGATGTATGATGGTCCTGATATTTCTAGCTTGTACTGGCCTGACCTTGATTATAGTGTGTTTCAGAATGGTAGAAATGCTTATAATAGTAGTAGAGTTGCAGTTTTAGATGAACTTGGTAGTTTTTCGTCTAGTGATCAACTGCAATTTAGTGCTTTTGACATGGGTTTGAGAGTGAAAAGGAGGTTGACAATGGATTATGATGGAAATCTAAGACTTTATAGTCTTAATAGCTCAACAGGATTGTGGATAATCACATGGCAAGCTATGGTGGAGCTTTGTAAGGTTCATGGGATATGTGGGCAAAATGGGATTTGTATATATACACCAGGGCCAAAGTGTTCATGTCCTCCTGGCTATGAAGTAGCTGATGCAAGTAACTTGAACTTGGGCTGCAAGCCTAAGTTCAAGCGTACATGCTCGAAGTCCCAAGAAGAGAAATTTGTGCGGATTCCGCAAGTAGATTTCTATGGATTTGATCTCAATTATAGTGTAGCAATTTCAATTGATGATTGCAGACAGCTCTGCTTGGGGGATTGCCGGTGTGAGGCATTTAGCTATAGGCTAAATGGGGAAGGGTGGTGTTACACCAAAAGTGCTCTTTTCAATGGCTACAAGTCTCCAGATTTTGTGGGCAGTATATACTTGAGAATGCCTGTGAGTGTGGAAGCACCATTACTAGTCACCAGGCTCAATGCCCTGGATTCATGTAAGAGTACTGAGGCCCAAAAAATGGGTTCTGCTTCAATGTATGACAATACTAGTAAAAGGGTAAGATGGGCATATCTGTATTGGTTTGCTACTGCAGCTGGTGCAGTTGAAATTCTCTTCATACTTTCAGAGTTGGTGAAGGGCATTCGACTTTCGAATTGGGCATTGGAGGATAGCGAGGAGCAAGAGGCAGAGCTGACTAGGTGTGTGAGGATAGTGAAAAGGAAGATTCAATGTGGAGAAGATTCATGGATGGAGGATATGTTGGATCCAAGACTAAAAGGGCAGTTCAGCAGGAAACAAGCAGAAAAGATGGTTGAGATTGGTATTTCTTGTGTGGAAGAAGATAGGAGCAGAAGACCAACAATGGATTCAGTATTACAAGATTTGCTAGAATGTGAAGGATGTCAAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

565

Amino Acids

63.6

Weight (kDa)

5.74

Isoelectric Point (pI)

37.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 163 1.3e-25 D-mannose binding lectin
S_locus_glycop PF00954 236 - 311 4.4e-10 S-locus glycoprotein domain
PAN_2 PF08276 330 - 386 3.8e-06 PAN-like domain
PAN_1 PF00024 337 - 389 9.5e-06 PAN domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 654
AasI GACNNNNNNGTC 2 cut(s) 245, 792
AccB7I CCANNNNNTGG 4 cut(s) 222, 251, 324, 1303
AciI CCGC 2 cut(s) 1018, 1025
AclWI GGATC 3 cut(s) 91, 1544, 1557
AcoI YGGCCR 1 cut(s) 228
AcsI RAATTY 3 cut(s) 420, 1010, 1392
AcuI CTGAAG 1 cut(s) 422
AcvI CACGTG 1 cut(s) 144
AfaI GTAC 5 cut(s) 349, 526, 605, 985, 1288
AfiI CCNNNNNNNGG 5 cut(s) 222, 251, 324, 1117, 1303
AflIII ACRYGT 1 cut(s) 143
AgsI TTSAA 8 cut(s) 568, 955, 979, 1074, 1177, 1317, 1391, 1514
AhlI ACTAGT 2 cut(s) 1249, 1331
AjnI CCWGG 4 cut(s) 898, 922, 1256, 1269
AjuI GAANNNNNNNTTGG 4 cut(s) 1430, 1462, 1636, 1668
Alw21I GWGCWC 1 cut(s) 1171
Alw26I GTCTC 2 cut(s) 28, 1194
AlwI GGATC 3 cut(s) 91, 1544, 1557
Ama87I CYCGRG 1 cut(s) 343
AoxI GGCC 4 cut(s) 228, 608, 902, 1293
ApeKI GCWGC 3 cut(s) 333, 963, 1376
ApoI RAATTY 3 cut(s) 420, 1010, 1392
AspS9I GGNCC 5 cut(s) 213, 406, 584, 902, 1294
AsuHPI GGTGA 3 cut(s) 117, 1246, 1429
AsuII TTCGAA 1 cut(s) 1436
AvaI CYCGRG 1 cut(s) 343
AvaII GGWCC 3 cut(s) 213, 406, 584
BaeI ACNNNNGTAYC 2 cut(s) 331, 364
BalI TGGCCA 1 cut(s) 230
BamHI GGATCC 1 cut(s) 1549
BarI GAAGNNNNNNTAC 2 cut(s) 1230, 1262
BbrPI CACGTG 1 cut(s) 144
BbsI GAAGAC 2 cut(s) 29, 1645
Bbv12I GWGCWC 1 cut(s) 1171
BbvI GCAGC 3 cut(s) 345, 950, 1388
BciT130I CCWGG 4 cut(s) 900, 924, 1258, 1271
BclI TGATCA 1 cut(s) 706
BcoDI GTCTC 2 cut(s) 28, 1194
BcuI ACTAGT 2 cut(s) 1249, 1331
BfaI CTAG 8 cut(s) 264, 411, 597, 702, 1250, 1332, 1482, 1673
BfmI CTRYAG 2 cut(s) 1129, 1374
BglI GCCNNNNNGGC 1 cut(s) 285
BisI GCNGC 3 cut(s) 334, 964, 1377
BlpI GCTNAGC 1 cut(s) 372
BlsI GCNGC 3 cut(s) 335, 965, 1378
BmcAI AGTACT 1 cut(s) 1288
Bme1390I CCNGG 4 cut(s) 900, 924, 1258, 1271
Bme18I GGWCC 3 cut(s) 213, 406, 584
BmeT110I CYCGRG 1 cut(s) 343
BmgT120I GGNCC 5 cut(s) 213, 406, 584, 902, 1294
BmiI GGNNCC 3 cut(s) 316, 408, 1551
BmrFI CCNGG 4 cut(s) 900, 924, 1258, 1271
BmsI GCATC 1 cut(s) 931
BpiI GAAGAC 2 cut(s) 29, 1645
BpmI CTGGAG 1 cut(s) 1176
Bpu1102I GCTNAGC 1 cut(s) 372
Bpu14I TTCGAA 1 cut(s) 1436
BpuEI CTTGAG 1 cut(s) 1237
BsaAI YACGTR 1 cut(s) 144
BsaBI GATNNNNATC 1 cut(s) 777
BsaJI CCNNGG 2 cut(s) 899, 1269
BsaXI ACNNNNNCTCC 2 cut(s) 1529, 1559
Bsc4I CCNNNNNNNGG 5 cut(s) 222, 251, 324, 1117, 1303
Bse118I RCCGGY 1 cut(s) 1110
Bse1I ACTGG 4 cut(s) 182, 245, 532, 611
Bse8I GATNNNNATC 1 cut(s) 777
BseBI CCWGG 4 cut(s) 900, 924, 1258, 1271
BseDI CCNNGG 2 cut(s) 899, 1269
BseGI GGATG 4 cut(s) 109, 231, 1539, 1691
BseJI GATNNNNATC 1 cut(s) 777
BseLI CCNNNNNNNGG 5 cut(s) 222, 251, 324, 1117, 1303
BseMII CTCAG 3 cut(s) 266, 363, 1281
BseNI ACTGG 4 cut(s) 182, 245, 532, 611
BseRI GAGGAG 1 cut(s) 1475
BseXI GCAGC 3 cut(s) 345, 950, 1388
BsgI GTGCAG 2 cut(s) 28, 1404
BshFI GGCC 4 cut(s) 230, 610, 904, 1295
BsiHKAI GWGCWC 1 cut(s) 1171
BsiHKCI CYCGRG 1 cut(s) 343
BsiSI CCGG 1 cut(s) 1111
BslFI GGGAC 2 cut(s) 251, 982
BslI CCNNNNNNNGG 5 cut(s) 222, 251, 324, 1117, 1303
BsmAI GTCTC 2 cut(s) 28, 1194
BsmFI GGGAC 2 cut(s) 251, 982
BsmI GAATGC 2 cut(s) 1227, 1425
BsnI GGCC 4 cut(s) 230, 610, 904, 1295
BsoBI CYCGRG 1 cut(s) 343
Bsp119I TTCGAA 1 cut(s) 1436
Bsp1286I GDGCHC 1 cut(s) 1171
Bsp143I GATC 4 cut(s) 83, 706, 1048, 1549
Bsp1720I GCTNAGC 1 cut(s) 372
BspACI CCGC 2 cut(s) 1018, 1025
BspANI GGCC 4 cut(s) 230, 610, 904, 1295
BspCNI CTCAG 3 cut(s) 267, 364, 1282
BspLI GGNNCC 3 cut(s) 316, 408, 1551
BspMAI CTGCAG 1 cut(s) 1378
BspPI GGATC 3 cut(s) 91, 1544, 1557
BspQI GCTCTTC 1 cut(s) 323
BspT104I TTCGAA 1 cut(s) 1436
BsrFI RCCGGY 1 cut(s) 1110
BsrI ACTGG 4 cut(s) 182, 245, 532, 611
BssAI RCCGGY 1 cut(s) 1110
BssECI CCNNGG 2 cut(s) 899, 1269
BssMI GATC 4 cut(s) 83, 706, 1048, 1549
Bst2UI CCWGG 4 cut(s) 900, 924, 1258, 1271
Bst4CI ACNGT 1 cut(s) 358
Bst6I CTCTTC 4 cut(s) 323, 505, 999, 1403
BstAPI GCANNNNNTGC 1 cut(s) 1382
BstBAI YACGTR 1 cut(s) 144
BstBI TTCGAA 1 cut(s) 1436
BstC8I GCNNGC 2 cut(s) 834, 968
BstDEI CTNAG 5 cut(s) 275, 372, 782, 972, 1290
BstF5I GGATG 4 cut(s) 109, 231, 1539, 1691
BstKTI GATC 4 cut(s) 86, 709, 1051, 1552
BstMAI GTCTC 2 cut(s) 28, 1194
BstMBI GATC 4 cut(s) 83, 706, 1048, 1549
BstMWI GCNNNNNNNGC 5 cut(s) 285, 368, 1024, 1376, 1382
BstNI CCWGG 4 cut(s) 900, 924, 1258, 1271
BstNSI RCATGY 1 cut(s) 990
BstSCI CCNGG 4 cut(s) 898, 922, 1256, 1269
BstSFI CTRYAG 2 cut(s) 1129, 1374
BstV1I GCAGC 3 cut(s) 345, 950, 1388
BstV2I GAAGAC 2 cut(s) 29, 1645
BstX2I RGATCY 2 cut(s) 83, 1549
BstYI RGATCY 2 cut(s) 83, 1549
BsuRI GGCC 4 cut(s) 230, 610, 904, 1295
BtsCI GGATG 4 cut(s) 109, 231, 1539, 1691
BtsIMutI CAGTG 1 cut(s) 102
Cac8I GCNNGC 2 cut(s) 834, 968
Cfr10I RCCGGY 1 cut(s) 1110
Cfr13I GGNCC 5 cut(s) 213, 406, 584, 902, 1294
Csp6I GTAC 5 cut(s) 348, 525, 604, 984, 1287
CviAII CATG 9 cut(s) 155, 733, 828, 860, 915, 987, 1278, 1530, 1695
CviQI GTAC 5 cut(s) 348, 525, 604, 984, 1287
DdeI CTNAG 5 cut(s) 275, 372, 782, 972, 1290
DpnI GATC 4 cut(s) 85, 708, 1050, 1551
DpnII GATC 4 cut(s) 83, 706, 1048, 1549
DrdI GACNNNNNNGTC 2 cut(s) 245, 792
DseDI GACNNNNNNGTC 2 cut(s) 245, 792
EaeI YGGCCR 1 cut(s) 228
Eam1104I CTCTTC 4 cut(s) 323, 505, 999, 1403
EarI CTCTTC 4 cut(s) 323, 505, 999, 1403
Eco47I GGWCC 3 cut(s) 213, 406, 584
Eco57I CTGAAG 1 cut(s) 422
Eco72I CACGTG 1 cut(s) 144
Eco88I CYCGRG 1 cut(s) 343
EcoO109I RGGNCCY 1 cut(s) 406
EcoRII CCWGG 4 cut(s) 898, 922, 1256, 1269
FaeI CATG 9 cut(s) 158, 736, 831, 863, 918, 990, 1281, 1533, 1698
FaqI GGGAC 2 cut(s) 251, 982
FatI CATG 9 cut(s) 154, 732, 827, 859, 914, 986, 1277, 1529, 1694
FbaI TGATCA 1 cut(s) 706
Fnu4HI GCNGC 3 cut(s) 334, 964, 1377
FokI GGATG 3 cut(s) 116, 238, 1546
Fsp4HI GCNGC 3 cut(s) 334, 964, 1377
FspBI CTAG 8 cut(s) 264, 411, 597, 702, 1250, 1332, 1482, 1673
GluI GCNGC 3 cut(s) 334, 964, 1377
GsuI CTGGAG 1 cut(s) 1176
HaeIII GGCC 4 cut(s) 230, 610, 904, 1295
HapII CCGG 1 cut(s) 1111
Hin1II CATG 9 cut(s) 158, 736, 831, 863, 918, 990, 1281, 1533, 1698
HincII GTYRAC 1 cut(s) 759
HindII GTYRAC 1 cut(s) 759
HindIII AAGCTT 1 cut(s) 433
HinfI GANTC 8 cut(s) 107, 267, 383, 1021, 1274, 1510, 1526, 1652
HpaII CCGG 1 cut(s) 1111
HphI GGTGA 3 cut(s) 117, 1246, 1429
Hpy166II GTNNAC 2 cut(s) 195, 759
Hpy188I TCNGA 5 cut(s) 112, 276, 402, 636, 1411
Hpy188III TCNNGA 5 cut(s) 264, 298, 325, 587, 1193
Hpy8I GTNNAC 2 cut(s) 195, 759
HpyAV CCTTC 4 cut(s) 397, 1139, 1414, 1676
HpyCH4III ACNGT 1 cut(s) 358
HpyCH4IV ACGT 1 cut(s) 143
HpyF10VI GCNNNNNNNGC 5 cut(s) 285, 368, 1024, 1376, 1382
HpyF3I CTNAG 5 cut(s) 275, 372, 782, 972, 1290
HpySE526I ACGT 1 cut(s) 143
Hsp92II CATG 9 cut(s) 158, 736, 831, 863, 918, 990, 1281, 1533, 1698
Ksp22I TGATCA 1 cut(s) 706
Kzo9I GATC 4 cut(s) 83, 706, 1048, 1549
LguI GCTCTTC 1 cut(s) 323
LmnI GCTCC 5 cut(s) 314, 465, 844, 1462, 1632
Lsp1109I GCAGC 3 cut(s) 345, 950, 1388
LweI GCATC 1 cut(s) 931
MaeI CTAG 8 cut(s) 264, 411, 597, 702, 1250, 1332, 1482, 1673
MaeII ACGT 1 cut(s) 143
MaeIII GTNAC 3 cut(s) 947, 1154, 1252
MalI GATC 4 cut(s) 85, 708, 1050, 1551
MboI GATC 4 cut(s) 83, 706, 1048, 1549
MfeI CAATTG 1 cut(s) 1074
MflI RGATCY 2 cut(s) 83, 1549
MhlI GDGCHC 1 cut(s) 1171
MlsI TGGCCA 1 cut(s) 230
MluNI TGGCCA 1 cut(s) 230
MlyI GAGTC 1 cut(s) 276
MmeI TCCRAC 1 cut(s) 1527
Mox20I TGGCCA 1 cut(s) 230
MscI TGGCCA 1 cut(s) 230
MseI TTAA 1 cut(s) 798
Msp20I TGGCCA 1 cut(s) 230
MspA1I CMGCKG 1 cut(s) 1379
MspI CCGG 1 cut(s) 1111
MspR9I CCNGG 4 cut(s) 900, 924, 1258, 1271
MunI CAATTG 1 cut(s) 1074
Mva1269I GAATGC 2 cut(s) 1227, 1425
MvaI CCWGG 4 cut(s) 900, 924, 1258, 1271
MwoI GCNNNNNNNGC 5 cut(s) 285, 368, 1024, 1376, 1382
NdeII GATC 4 cut(s) 83, 706, 1048, 1549
NlaIII CATG 9 cut(s) 158, 736, 831, 863, 918, 990, 1281, 1533, 1698
NlaIV GGNNCC 3 cut(s) 316, 408, 1551
NmeAIII GCCGAG 1 cut(s) 305
NmuCI GTSAC 1 cut(s) 1252
NspI RCATGY 1 cut(s) 990
NspV TTCGAA 1 cut(s) 1436
PaeR7I CTCGAG 1 cut(s) 343
PciSI GCTCTTC 1 cut(s) 323
PctI GAATGC 2 cut(s) 1227, 1425
PfeI GAWTC 7 cut(s) 107, 383, 1021, 1274, 1510, 1526, 1652
PflMI CCANNNNNTGG 4 cut(s) 222, 251, 324, 1303
PkrI GCNGC 3 cut(s) 335, 965, 1378
PleI GAGTC 1 cut(s) 275
PmaCI CACGTG 1 cut(s) 144
PmlI CACGTG 1 cut(s) 144
PpsI GAGTC 1 cut(s) 275
Ppu21I YACGTR 1 cut(s) 144
PpuMI RGGWCCY 1 cut(s) 406
PsiI TTATAA 1 cut(s) 654
Psp5II RGGWCCY 1 cut(s) 406
Psp6I CCWGG 4 cut(s) 898, 922, 1256, 1269
PspCI CACGTG 1 cut(s) 144
PspGI CCWGG 4 cut(s) 898, 922, 1256, 1269
PspN4I GGNNCC 3 cut(s) 316, 408, 1551
PspPI GGNCC 5 cut(s) 213, 406, 584, 902, 1294
PspPPI RGGWCCY 1 cut(s) 406
PspXI VCTCGAGB 1 cut(s) 343
PstI CTGCAG 1 cut(s) 1378
PsuI RGATCY 2 cut(s) 83, 1549
PvuII CAGCTG 1 cut(s) 1379
RsaI GTAC 5 cut(s) 349, 526, 605, 985, 1288
RsaNI GTAC 5 cut(s) 348, 525, 604, 984, 1287
SapI GCTCTTC 1 cut(s) 323
SaqAI TTAA 1 cut(s) 798
SatI GCNGC 3 cut(s) 334, 964, 1377
Sau3AI GATC 4 cut(s) 83, 706, 1048, 1549
Sau96I GGNCC 5 cut(s) 213, 406, 584, 902, 1294
ScaI AGTACT 1 cut(s) 1288
SchI GAGTC 1 cut(s) 276
ScrFI CCNGG 4 cut(s) 900, 924, 1258, 1271
SduI GDGCHC 1 cut(s) 1171
SfaNI GCATC 1 cut(s) 931
SfcI CTRYAG 2 cut(s) 1129, 1374
Sfr274I CTCGAG 1 cut(s) 343
SfuI TTCGAA 1 cut(s) 1436
SinI GGWCC 3 cut(s) 213, 406, 584
SlaI CTCGAG 1 cut(s) 343
SmlI CTYRAG 2 cut(s) 343, 1216
SmoI CTYRAG 2 cut(s) 343, 1216
SpeI ACTAGT 2 cut(s) 1249, 1331
SsiI CCGC 2 cut(s) 1018, 1025
SspMI CTAG 8 cut(s) 264, 411, 597, 702, 1250, 1332, 1482, 1673
StyD4I CCNGG 4 cut(s) 898, 922, 1256, 1269
TaaI ACNGT 1 cut(s) 358
TaiI ACGT 1 cut(s) 146
TaqI TCGA 5 cut(s) 290, 344, 992, 1429, 1436
TatI WGTACW 2 cut(s) 603, 1286
TfiI GAWTC 7 cut(s) 107, 383, 1021, 1274, 1510, 1526, 1652
Tru1I TTAA 1 cut(s) 798
Tru9I TTAA 1 cut(s) 798
TscAI CASTG 1 cut(s) 102
TseFI GTSAC 1 cut(s) 1252
TseI GCWGC 3 cut(s) 333, 963, 1376
Tsp45I GTSAC 1 cut(s) 1252
TspDTI ATGAA 9 cut(s) 17, 143, 696, 848, 903, 945, 1266, 1390, 1518
TspRI CASTG 1 cut(s) 102
Van91I CCANNNNNTGG 4 cut(s) 222, 251, 324, 1303
VpaK11BI GGWCC 3 cut(s) 213, 406, 584
XapI RAATTY 3 cut(s) 420, 1010, 1392
XbaI TCTAGA 1 cut(s) 263
XceI RCATGY 1 cut(s) 990
XcmI CCANNNNNNNNNTGG 1 cut(s) 223
XhoI CTCGAG 1 cut(s) 343
XspI CTAG 8 cut(s) 264, 411, 597, 702, 1250, 1332, 1482, 1673
ZrmI AGTACT 1 cut(s) 1288
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.