FvH4_6g12880

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000166
Physical Location & Seq
Reverse (-)
7806012 .. 7810026
4015 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g12880.t1

Sequence Viewer

Length: 2319 bp
ATGCCAAGCTTAAGGAGAGGGAACTCCTTGAAAGCTGAGGAGGAGAACAACGTCTTGGTTTCACCAGATGGAACATTTACCAGTGGATTTTACAAAGTTGGTGCCAATGCCTCCTGTTATTCAATTTGGTTCACCAAAAGTGTCAATAAAACAGTTGTCTGGATGGCTAACCGAGACAGGCCTGTTAGCAAAAGAGGCTCTAAGCTCACCCTCCATGCAAATGGCAACCTGGTTTTGACAGATGCACTTGGTTCACTTGTGTGGTCAACCAACACAATCTCTAACGAAGACACAGAAGTTGTTCTTCTTGATACAGGAAATTTGGTGCTGAGGAATCAAGCCAAGAGGGTAATCTGGCAGAGTTTTGATTCTCCCACAGACACACTTCTACCAACACAGCCACTCACCAAGAACACGACCTTGGTATCCATGAGAAGCCAAGGTACATACTTATCTGGATTCTATAACTTCAAGTTCGATGATAACAGTGTCTTGTTTCTCATCTACAATGGCCCTCAACTTTCTAGTGTTTATTGGCCTCGGATTATTCCAAGTGTTTTTGAGAGTGGTAGAAATCCTTACAACAGCTCCAGGGTGGCAATTTTGGATGTGGCCGGACAATTTATATCTAGTGACAACATGCAGTTCAAAGCATCTGACTATGGGGTTGGTCCAAAGAGGCGTTTAACTATGGATTATGATGGCATCTTAAGATTGTACAGTCTTGGTGAACCGACAGGGATGTGGGAACTCTCATGGTTGCCTGATGGTGTTGATGCATGCCGGGTTCAAGGCTTGTGCGGTGAATATGGTATTTGCACATACAAACCAGAACCTACTTGTACCTGCCCTTCAGGGTTTTTCCTAAATGATCCCTCAGATTGGTCCAAAGGCTGCTCACCTCCCTTCAATTTGACTCAAGATACAAGCAAGCTGGATTTCCTGGAGCTTCCTTACACAGATTACTATGGATATGACATGGTAAGCTACACTCTTGGAATCTCTTTTGAAGCATGCAGGAATTCATGTCTGGTGGATTCAAAATGCTTGGGATTCGGATATGCACTGGACGGGAAAGGAGAGTGTTACCCTAAGAGTCTTCTGCTCAATGGATATCGTCTATCGGATGTTAAGAGCATCATCCATGTTAAGATTCCAAAAGGTTTTCTGAATCCTGGTGCAGTACAAACCAGACTAGAGACACATGATTTGAACTGTTCAGCGGTACGGTTTCATGTAAGTACTGATCTTGAAACAGAAAAGGGCAATGGAAACCAGTACATGAAATACCTTGTTGGATTTTTGAGTTCCTTTGGGGTAATTGAAGCAATATGCATCAGCTTGACATGGTGGTTTGTTTTCCGTAAGCAAGCTCATGAGGAAATGGTGAACATGGGGTATATGGCATTAGCCATAAATGCTGTAGGATTCAAACGTTTCACCTATGCAGAACTGAAGAAAGCAACCAATAACTTCAAACATGAGATAGGAGAAGGAGGGTTCGGAACAGTCTATAAAGGGGTTCTGGATGGTGAAAGAGTTGTAGCTGTGAAGAGACTAGAAGGCATTGTGCAAGGAGATGCAGAGTTTTGGGCAGAGGTTAGTGTCATAGGGAATATCAATCATATGAACTTGGTTAAACTATATGGTTTCTGTGCTGATAATGATCATAAGCTCTTGGTGTATGAGTACATGGAGAATGGATCCTTGGATAAACTCTTGTTCTCAGATGTTGAATTAGATTTGGAGCAGAGATACAATATTGCATTAGGCACTGCAAAGGGTGGTCCCCGCACGACTTACTCCGGGTTTCAGGGTGAAATTTGGGGTGGGTCGTGTCATGTAAAGCCTCAAAACATACTGTTAGATGAGCATCTTGAACCTAAGGTAGCAGATTTTGGCATGTCAAAGTTATTCAAACTTGACAATGATGATGCAGGCAATGGATTTTCGAGAGTTCGAGGTACCAGAGGTTATATGGCTCCAGAGTGGATGGTGAACCTGAAAATTGATTCAAAGGCAGATGTCTACAGCTATGGGATTGTTTTGTTGGAGCTACTGAGTGGAAAGAGTGCATCTATTCTGCTTACAGCTTTTGCACAAGAGTACACTGAGCACAACCAACTGGTACAATGTGTGACTGAAAAGATCAGAGTCGAAGGGCTTAAGGAAGTGATTGATCCTAGACTCCATCATAATTTTAACAGGAACAAGCTCGAAAGACTGATGAAGGTTGCTCTTCTGTGTGTGCAAGAAGACCGCAGCGCAAGACCTGCCATGAGCAAGGTTGTAGAGCTTCTACTTGAGAATGATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

773

Amino Acids

86.4

Weight (kDa)

5.84

Isoelectric Point (pI)

31.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 51 - 139 1.6e-26 D-mannose binding lectin
S_locus_glycop PF00954 226 - 287 7.5e-08 S-locus glycoprotein domain
Pkinase PF00069 492 - 764 2.5e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 492 - 767 2.2e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 854, 2281
Acc65I GGTACC 1 cut(s) 1964
AccB1I GGYRCC 2 cut(s) 101, 1964
AccI GTMKAC 1 cut(s) 2028
AciI CCGC 4 cut(s) 801, 1223, 1792, 2260
AclI AACGTT 1 cut(s) 1435
AclWI GGATC 4 cut(s) 866, 1698, 1711, 2174
AcoI YGGCCR 1 cut(s) 612
AcsI RAATTY 3 cut(s) 319, 1021, 1821
AcuI CTGAAG 2 cut(s) 837, 1475
AfiI CCNNNNNNNGG 1 cut(s) 882
AflII CTTAAG 3 cut(s) 10, 709, 2165
AjnI CCWGG 4 cut(s) 228, 590, 942, 1174
AjuI GAANNNNNNNTTGG 6 cut(s) 38, 70, 404, 436, 1691, 1723
AleI CACNNNNGTG 1 cut(s) 259
Alw21I GWGCWC 1 cut(s) 2118
Alw26I GTCTC 3 cut(s) 168, 1193, 1549
AlwI GGATC 4 cut(s) 866, 1698, 1711, 2174
AoxI GGCC 4 cut(s) 179, 511, 536, 612
ApeKI GCWGC 2 cut(s) 894, 2262
ApoI RAATTY 3 cut(s) 319, 1021, 1821
ArsI GACNNNNNNTTYG 2 cut(s) 1192, 1224
Asp700I GAANNNNTTC 1 cut(s) 300
Asp718I GGTACC 1 cut(s) 1964
AspLEI GCGC 1 cut(s) 2267
AspS9I GGNCC 4 cut(s) 512, 671, 885, 1787
AsuC2I CCSGG 2 cut(s) 785, 1807
AvaII GGWCC 3 cut(s) 671, 885, 1787
AxyI CCTNAGG 1 cut(s) 1884
BaeI ACNNNNGTAYC 2 cut(s) 408, 441
BamHI GGATCC 1 cut(s) 1703
BanI GGYRCC 2 cut(s) 101, 1964
BarI GAAGNNNNNNTAC 4 cut(s) 427, 459, 835, 867
BbsI GAAGAC 3 cut(s) 294, 1091, 2262
Bbv12I GWGCWC 1 cut(s) 2118
BbvCI CCTCAGC 2 cut(s) 36, 329
BbvI GCAGC 2 cut(s) 881, 2274
BccI CCATC 7 cut(s) 62, 157, 695, 761, 1523, 1987, 2199
BciT130I CCWGG 4 cut(s) 230, 592, 944, 1176
BciVI GTATCC 1 cut(s) 436
BclI TGATCA 1 cut(s) 1666
BcnI CCSGG 2 cut(s) 785, 1807
BcoDI GTCTC 3 cut(s) 168, 1193, 1549
BfaI CTAG 5 cut(s) 525, 630, 1196, 1559, 2184
BfmI CTRYAG 2 cut(s) 1422, 2029
BfrI CTTAAG 3 cut(s) 10, 709, 2165
BfuAI ACCTGC 2 cut(s) 854, 2281
BfuI GTATCC 1 cut(s) 436
BisI GCNGC 2 cut(s) 895, 2263
BlsI GCNGC 2 cut(s) 896, 2264
BmcAI AGTACT 1 cut(s) 1243
Bme1390I CCNGG 6 cut(s) 230, 592, 785, 944, 1176, 1807
Bme18I GGWCC 3 cut(s) 671, 885, 1787
BmgT120I GGNCC 4 cut(s) 512, 671, 885, 1787
BmiI GGNNCC 5 cut(s) 103, 1705, 1789, 1966, 1983
BmrFI CCNGG 6 cut(s) 230, 592, 785, 944, 1176, 1807
BpiI GAAGAC 3 cut(s) 294, 1091, 2262
BpmI CTGGAG 3 cut(s) 574, 965, 1968
Bpu10I CCTNAGC 2 cut(s) 36, 329
BpuEI CTTGAG 1 cut(s) 903
BpuMI CCSGG 2 cut(s) 785, 1807
BsaBI GATNNNNATC 2 cut(s) 1665, 1872
BsaJI CCNNGG 5 cut(s) 420, 439, 539, 591, 1707
BsaXI ACNNNNNCTCC 2 cut(s) 572, 602
Bsc4I CCNNNNNNNGG 1 cut(s) 882
Bse1I ACTGG 4 cut(s) 81, 1071, 1276, 2130
Bse21I CCTNAGG 1 cut(s) 1884
Bse3DI GCAATG 2 cut(s) 1273, 1948
Bse8I GATNNNNATC 2 cut(s) 1665, 1872
BseBI CCWGG 4 cut(s) 230, 592, 944, 1176
BseDI CCNNGG 5 cut(s) 420, 439, 539, 591, 1707
BseGI GGATG 7 cut(s) 168, 613, 747, 1132, 1140, 1534, 1998
BseJI GATNNNNATC 2 cut(s) 1665, 1872
BseLI CCNNNNNNNGG 1 cut(s) 882
BseMI GCAATG 2 cut(s) 1273, 1948
BseMII CTCAG 6 cut(s) 27, 320, 891, 1740, 2051, 2103
BseNI ACTGG 4 cut(s) 81, 1071, 1276, 2130
BseRI GAGGAG 2 cut(s) 53, 56
BseXI GCAGC 2 cut(s) 881, 2274
BsgI GTGCAG 1 cut(s) 1200
BshFI GGCC 4 cut(s) 181, 513, 538, 614
BshNI GGYRCC 2 cut(s) 101, 1964
BsiHKAI GWGCWC 1 cut(s) 2118
BsiSI CCGG 3 cut(s) 615, 784, 1806
BslFI GGGAC 1 cut(s) 1773
BslI CCNNNNNNNGG 1 cut(s) 882
BsmAI GTCTC 3 cut(s) 168, 1193, 1549
BsmFI GGGAC 1 cut(s) 1773
BsnI GGCC 4 cut(s) 181, 513, 538, 614
Bsp1286I GDGCHC 1 cut(s) 2118
Bsp1407I TGTACA 1 cut(s) 717
Bsp143I GATC 6 cut(s) 871, 1246, 1666, 1703, 2148, 2179
BspACI CCGC 4 cut(s) 801, 1223, 1792, 2260
BspANI GGCC 4 cut(s) 181, 513, 538, 614
BspCNI CTCAG 6 cut(s) 28, 321, 890, 1739, 2052, 2104
BspHI TCATGA 1 cut(s) 1375
BspLI GGNNCC 5 cut(s) 103, 1705, 1789, 1966, 1983
BspMI ACCTGC 2 cut(s) 854, 2281
BspPI GGATC 4 cut(s) 866, 1698, 1711, 2174
BspQI GCTCTTC 1 cut(s) 2244
BspT107I GGYRCC 2 cut(s) 101, 1964
BspTI CTTAAG 3 cut(s) 10, 709, 2165
BsrDI GCAATG 2 cut(s) 1273, 1948
BsrGI TGTACA 1 cut(s) 717
BsrI ACTGG 4 cut(s) 81, 1071, 1276, 2130
BssECI CCNNGG 5 cut(s) 420, 439, 539, 591, 1707
BssMI GATC 6 cut(s) 871, 1246, 1666, 1703, 2148, 2179
BssT1I CCWWGG 3 cut(s) 420, 439, 1707
Bst2UI CCWGG 4 cut(s) 230, 592, 944, 1176
Bst4CI ACNGT 7 cut(s) 154, 488, 722, 1217, 1230, 1510, 1863
Bst6I CTCTTC 2 cut(s) 1547, 2244
BstAFI CTTAAG 3 cut(s) 10, 709, 2165
BstAPI GCANNNNNTGC 1 cut(s) 2273
BstAUI TGTACA 1 cut(s) 717
BstC8I GCNNGC 5 cut(s) 781, 932, 1015, 1371, 1939
BstDEI CTNAG 9 cut(s) 36, 201, 329, 877, 1092, 1726, 1884, 2060, 2112
BstF5I GGATG 7 cut(s) 168, 613, 747, 1132, 1140, 1534, 1998
BstHHI GCGC 1 cut(s) 2267
BstKTI GATC 6 cut(s) 874, 1249, 1669, 1706, 2151, 2182
BstMAI GTCTC 3 cut(s) 168, 1193, 1549
BstMBI GATC 6 cut(s) 871, 1246, 1666, 1703, 2148, 2179
BstMWI GCNNNNNNNGC 3 cut(s) 195, 1418, 2273
BstNI CCWGG 4 cut(s) 230, 592, 944, 1176
BstNSI RCATGY 4 cut(s) 643, 783, 1017, 1906
BstSCI CCNGG 6 cut(s) 228, 590, 783, 942, 1174, 1805
BstSFI CTRYAG 2 cut(s) 1422, 2029
BstV1I GCAGC 2 cut(s) 881, 2274
BstV2I GAAGAC 3 cut(s) 294, 1091, 2262
BstX2I RGATCY 1 cut(s) 1703
BstXI CCANNNNNNTGG 1 cut(s) 221
BstYI RGATCY 1 cut(s) 1703
Bsu36I CCTNAGG 1 cut(s) 1884
BsuI GTATCC 1 cut(s) 436
BsuRI GGCC 4 cut(s) 181, 513, 538, 614
BtsCI GGATG 7 cut(s) 168, 613, 747, 1132, 1140, 1534, 1998
BtsI GCAGTG 1 cut(s) 1773
BtsIMutI CAGTG 5 cut(s) 88, 493, 1064, 1773, 2109
BveI ACCTGC 2 cut(s) 854, 2281
Cac8I GCNNGC 5 cut(s) 781, 932, 1015, 1371, 1939
CciI TCATGA 1 cut(s) 1375
CfoI GCGC 1 cut(s) 2267
Cfr13I GGNCC 4 cut(s) 512, 671, 885, 1787
CsiI ACCWGGT 1 cut(s) 228
DdeI CTNAG 9 cut(s) 36, 201, 329, 877, 1092, 1726, 1884, 2060, 2112
DpnI GATC 6 cut(s) 873, 1248, 1668, 1705, 2150, 2181
DpnII GATC 6 cut(s) 871, 1246, 1666, 1703, 2148, 2179
EaeI YGGCCR 1 cut(s) 612
Eam1104I CTCTTC 2 cut(s) 1547, 2244
EarI CTCTTC 2 cut(s) 1547, 2244
Eco130I CCWWGG 3 cut(s) 420, 439, 1707
Eco147I AGGCCT 1 cut(s) 181
Eco32I GATATC 1 cut(s) 1115
Eco47I GGWCC 3 cut(s) 671, 885, 1787
Eco57I CTGAAG 2 cut(s) 837, 1475
Eco81I CCTNAGG 1 cut(s) 1884
EcoRI GAATTC 1 cut(s) 1021
EcoRII CCWGG 4 cut(s) 228, 590, 942, 1174
EcoRV GATATC 1 cut(s) 1115
EcoT14I CCWWGG 3 cut(s) 420, 439, 1707
EcoT22I ATGCAT 2 cut(s) 781, 1337
ErhI CCWWGG 3 cut(s) 420, 439, 1707
FalI AAGNNNNNCTT 2 cut(s) 288, 320
FaqI GGGAC 1 cut(s) 1773
FauI CCCGC 1 cut(s) 1799
FauNDI CATATG 1 cut(s) 1626
FbaI TGATCA 1 cut(s) 1666
FblI GTMKAC 1 cut(s) 2028
Fnu4HI GCNGC 2 cut(s) 895, 2263
FokI GGATG 7 cut(s) 175, 620, 754, 1127, 1139, 1541, 2005
Fsp4HI GCNGC 2 cut(s) 895, 2263
FspBI CTAG 5 cut(s) 525, 630, 1196, 1559, 2184
GlaI GCGC 1 cut(s) 2266
GluI GCNGC 2 cut(s) 895, 2263
GsuI CTGGAG 3 cut(s) 574, 965, 1968
HaeIII GGCC 4 cut(s) 181, 513, 538, 614
HapII CCGG 3 cut(s) 615, 784, 1806
HhaI GCGC 1 cut(s) 2267
Hin6I GCGC 1 cut(s) 2265
HinP1I GCGC 1 cut(s) 2265
HincII GTYRAC 1 cut(s) 267
HindII GTYRAC 1 cut(s) 267
HindIII AAGCTT 1 cut(s) 7
HpaII CCGG 3 cut(s) 615, 784, 1806
Hpy166II GTNNAC 8 cut(s) 132, 254, 267, 731, 1390, 1999, 2029, 2109
Hpy188I TCNGA 9 cut(s) 543, 658, 880, 1058, 1126, 1170, 1505, 1729, 2153
Hpy8I GTNNAC 8 cut(s) 132, 254, 267, 731, 1390, 1999, 2029, 2109
HpyAV CCTTC 6 cut(s) 861, 916, 1487, 1556, 2153, 2224
HpyCH4III ACNGT 7 cut(s) 154, 488, 722, 1217, 1230, 1510, 1863
HpyCH4IV ACGT 2 cut(s) 51, 1435
HpyF10VI GCNNNNNNNGC 3 cut(s) 195, 1418, 2273
HpyF3I CTNAG 9 cut(s) 36, 201, 329, 877, 1092, 1726, 1884, 2060, 2112
HpySE526I ACGT 2 cut(s) 51, 1435
HspAI GCGC 1 cut(s) 2265
KpnI GGTACC 1 cut(s) 1968
Ksp22I TGATCA 1 cut(s) 1666
Kzo9I GATC 6 cut(s) 871, 1246, 1666, 1703, 2148, 2179
LguI GCTCTTC 1 cut(s) 2244
LmnI GCTCC 5 cut(s) 593, 946, 1747, 1987, 2053
Lsp1109I GCAGC 2 cut(s) 881, 2274
MabI ACCWGGT 1 cut(s) 228
MaeI CTAG 5 cut(s) 525, 630, 1196, 1559, 2184
MaeII ACGT 2 cut(s) 51, 1435
MaeIII GTNAC 3 cut(s) 632, 1085, 2137
MalI GATC 6 cut(s) 873, 1248, 1668, 1705, 2150, 2181
MboI GATC 6 cut(s) 871, 1246, 1666, 1703, 2148, 2179
MboII GAAGA 7 cut(s) 296, 299, 1091, 1468, 1564, 2231, 2267
MflI RGATCY 1 cut(s) 1703
MhlI GDGCHC 1 cut(s) 2118
MlyI GAGTC 4 cut(s) 910, 1105, 2163, 2181
MmeI TCCRAC 2 cut(s) 1276, 2031
Mph1103I ATGCAT 2 cut(s) 781, 1337
MroXI GAANNNNTTC 1 cut(s) 300
MseI TTAA 8 cut(s) 11, 686, 710, 1131, 1149, 1638, 2166, 2202
MslI CAYNNNNRTG 2 cut(s) 219, 259
MspA1I CMGCKG 1 cut(s) 1223
MspCI CTTAAG 3 cut(s) 10, 709, 2165
MspI CCGG 3 cut(s) 615, 784, 1806
MspR9I CCNGG 6 cut(s) 230, 592, 785, 944, 1176, 1807
MvaI CCWGG 4 cut(s) 230, 592, 944, 1176
MwoI GCNNNNNNNGC 3 cut(s) 195, 1418, 2273
NciI CCSGG 2 cut(s) 785, 1807
NdeI CATATG 1 cut(s) 1626
NdeII GATC 6 cut(s) 871, 1246, 1666, 1703, 2148, 2179
NlaIV GGNNCC 5 cut(s) 103, 1705, 1789, 1966, 1983
NmuCI GTSAC 2 cut(s) 632, 2137
NsiI ATGCAT 2 cut(s) 781, 1337
NspI RCATGY 4 cut(s) 643, 783, 1017, 1906
OliI CACNNNNGTG 1 cut(s) 259
PaeI GCATGC 2 cut(s) 783, 1017
PagI TCATGA 1 cut(s) 1375
PceI AGGCCT 1 cut(s) 181
PciSI GCTCTTC 1 cut(s) 2244
PdmI GAANNNNTTC 1 cut(s) 300
PfoI TCCNGGA 1 cut(s) 942
PkrI GCNGC 2 cut(s) 896, 2264
PleI GAGTC 4 cut(s) 910, 1104, 2162, 2181
PpsI GAGTC 4 cut(s) 910, 1104, 2162, 2181
Psp1406I AACGTT 1 cut(s) 1435
Psp6I CCWGG 4 cut(s) 228, 590, 942, 1174
PspGI CCWGG 4 cut(s) 228, 590, 942, 1174
PspN4I GGNNCC 5 cut(s) 103, 1705, 1789, 1966, 1983
PspPI GGNCC 4 cut(s) 512, 671, 885, 1787
PsuI RGATCY 1 cut(s) 1703
RseI CAYNNNNRTG 2 cut(s) 219, 259
SapI GCTCTTC 1 cut(s) 2244
SaqAI TTAA 8 cut(s) 11, 686, 710, 1131, 1149, 1638, 2166, 2202
SatI GCNGC 2 cut(s) 895, 2263
Sau3AI GATC 6 cut(s) 871, 1246, 1666, 1703, 2148, 2179
Sau96I GGNCC 4 cut(s) 512, 671, 885, 1787
ScaI AGTACT 1 cut(s) 1243
SchI GAGTC 4 cut(s) 910, 1105, 2163, 2181
ScrFI CCNGG 6 cut(s) 230, 592, 785, 944, 1176, 1807
SduI GDGCHC 1 cut(s) 2118
SexAI ACCWGGT 1 cut(s) 228
SfcI CTRYAG 2 cut(s) 1422, 2029
SinI GGWCC 3 cut(s) 671, 885, 1787
SmiMI CAYNNNNRTG 2 cut(s) 219, 259
SmlI CTYRAG 5 cut(s) 10, 709, 918, 2165, 2303
SmoI CTYRAG 5 cut(s) 10, 709, 918, 2165, 2303
SphI GCATGC 2 cut(s) 783, 1017
SseBI AGGCCT 1 cut(s) 181
SsiI CCGC 4 cut(s) 801, 1223, 1792, 2260
SspI AATATT 1 cut(s) 1762
SspMI CTAG 5 cut(s) 525, 630, 1196, 1559, 2184
StuI AGGCCT 1 cut(s) 181
StyD4I CCNGG 6 cut(s) 228, 590, 783, 942, 1174, 1805
StyI CCWWGG 3 cut(s) 420, 439, 1707
TaaI ACNGT 7 cut(s) 154, 488, 722, 1217, 1230, 1510, 1863
TaiI ACGT 2 cut(s) 54, 1438
TaqI TCGA 5 cut(s) 477, 1952, 1960, 2157, 2217
TatI WGTACW 6 cut(s) 717, 1183, 1241, 1278, 1689, 2106
Tru1I TTAA 8 cut(s) 11, 686, 710, 1131, 1149, 1638, 2166, 2202
Tru9I TTAA 8 cut(s) 11, 686, 710, 1131, 1149, 1638, 2166, 2202
TscAI CASTG 5 cut(s) 88, 493, 1071, 1780, 2116
TseFI GTSAC 2 cut(s) 632, 2137
TseI GCWGC 2 cut(s) 894, 2262
Tsp45I GTSAC 2 cut(s) 632, 2137
TspDTI ATGAA 5 cut(s) 1014, 1223, 1298, 1643, 2243
TspGWI ACGGA 1 cut(s) 1352
TspRI CASTG 5 cut(s) 88, 493, 1071, 1780, 2116
Vha464I CTTAAG 3 cut(s) 10, 709, 2165
VpaK11BI GGWCC 3 cut(s) 671, 885, 1787
XapI RAATTY 3 cut(s) 319, 1021, 1821
XceI RCATGY 4 cut(s) 643, 783, 1017, 1906
XcmI CCANNNNNNNNNTGG 1 cut(s) 1975
XmiI GTMKAC 1 cut(s) 2028
XmnI GAANNNNTTC 1 cut(s) 300
XspI CTAG 5 cut(s) 525, 630, 1196, 1559, 2184
ZrmI AGTACT 1 cut(s) 1243
Zsp2I ATGCAT 2 cut(s) 781, 1337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.