RLG00000001263

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000166
Physical Location & Seq
Forward (+)
13128700 .. 13132239
3540 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001263

Sequence Viewer

Length: 2370 bp
ATGGCTTCTCTGTCTCACATTTTTCTTCTTTTTCTTGCAATTTATTCCCAAATCTCATCTTCAACGTCCGCCACTCTGAATAAAAGCTCATCCCTATCTGTAGAGAAACCAGACGATGTTTTAACTTCACTGGATGGAGTTTTCACCGCCGGGTTTCACCAAGTCGGCAACAATTCATTTTGCTTTGCCATTTGGTTCAGTGAGCCATTTGACCACTACAAAAACAGAACCATAGTCTGGATGGCCAACCGTGACCAACCAGTCAATGGCAAACACTCAAAGCTCTCCCTCCTCAAAACTGGGGATCTCATCTTAACCGACGCTGGTCAATCCAACGTTTGGTCCACAGCCACCACTTCAGTCTCACCGGCGAACTTAAGCCTCCACAATTCCGGCAATCTTGTTTTGCTCAACTCGGAGCATGTCATTCTATGGCAGAGCTTTGATTACCCTACTGATACTCTTCTTTCGAGCCAACCACTCACCAGAAGCACAATCCTTGTCTCCATGAGAAGCCCGAGCAACTACTCCTCTGGCTTCTACAAGCTCTTCTTTGACAATGATAACCTTCTCCGGCTACTCTTTGACGGTCTTGAAGTTTCAAGTGTGTATTGGTTTGAGCCGTGGCTCACAGGCCAAGACGCCGGAAGGTCCACAGATAACAGCAGTAGAGTTGCCGTGATGGATTCCCTAGGCAAGTTTACTTCATCGGACACCTATACTTTGATGGCTTCCGATTATGGTGCAGCTTCGCAGAGAAGACTGACTGTTGATTGTGATGGAAATGTTCGGTTGCACAGTCGGGCCAAACCAGGAGACAGATGGGTTGTGACAGGGCAGATCATTCAAGATCCTTGTAAGATTCATGGGGTTTGTGGTCCTAATAGTGTGTGCAGCTATGAGCCTAGCACCGGAAGAAAATGTTCTTGCATTCCTGGTTACAAAATGTCAAATCATACTGATTGGTATTATGGTTGTGAACCTGAGTTCACTTACACATGCGGTGGAGGTGAGTCTAGTTTCTTCAAGCTCTCGAAGCTCGAGTTTTTCGGGTACGATTACGGATACTTCACCAACTACACCTTTATGGAGTGTCAGGAACTTTGTTTGCAGCTGTGTGACTGCAAAGGGTTCCAATACTCTCGAATCCCAAGCCTTAGTATATATAGCTGCTATCCGAAAACAGTGTTGCTCAATGGTTACAGGTCTCCTAGCTTTTTTGGAGACATATATTTGAGAGTGCCAAAGATCCATCTGTCATCTTATGGATTGCCACAACAAGACTATAGTTTGAGTTGCTTAGATAAGGTGGTTGAGCTAGACAGAACCTATGAGAAGAGCCGTGTAACTGGTCTAGTGAAATTTTTGCTATGGTTTGCCTGCGGAGTTGGAGGGTTCGAGATCATTTGTATACTTTTGGTTTTGGGTCTAATAACTCGAAACCGGAGAGATTCCAATGAGGATAAGTATGGTTACCATCTTGCTGCAACTGGATTCAAGAGGTTTAGCTACGCTGAGCTTAAGAAGGCGACGCGGGGTTTTAGTGAAGAAATTGGAAGAGGAGCAGGAGGTGTTGTTTACAAAGCTGTGTTGGCTGATCATCGAGTTGCAGCGATCAAGAGGCTTAATGAAACCAACCAAGGAGAAGGTGAGTTTTCAGCAGAAGTCAACACTATTGGGAGGCTGAACCATATGCATTTGATTGAGATGCTTCTTGTTTATGAGTACATGGAGCATGGTTCCTTGGCACAAAAGTTAGCTTCCAATGTCCTTGATTGGGAAAAGAGGTTTGAGATTGCTCTAGGCACTGCAAAGGGTCTTGCTTATTTACATGAAGAATGTTTGGAGTGGGTTTTACATTGTGATGTTAAGCCTCAAAACATACTCTTGGACTCCAATTATCAACCAAAGGTTGCAGATTTTGGCCTATCCAAGCTCCTCAACAGAGATGACCTTAAGAACTGGAGCTTTTCGAGGATACGAGGAACTAGAGGTTACATTGCTCCGGAGTGGGTTTACAATTTGCCCATCACATCCAAAGTGGATGTGTACAGCTATGGGGTTGTGGTGTTGGAGATGGTGACCGGAAAGAACCCGATAAAGCCGCATGTGGATGCCATTGATGGCGAGCAGAGAAGGCTGATCATGTGGGTGAGGGAGAAATTACATAATGGAACTTCTGCTGGTGAAATTGAAGCTCGGATAGGAGACGTCATAGACCCTTCGTTTGAAGGTAAATATGATGTAAAAAAGATGGGGATTCTGTTGGAAGTAGCTTTACATTGCGTAGAGGAAGACAGAGACGCGAGACCAACTATGAGCCAAGTCGTTGAGATGCTTGTGCTGCTTGACAAAGACCAAGAGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

790

Amino Acids

88.79

Weight (kDa)

6.05

Isoelectric Point (pI)

40.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 77 - 163 5.9e-23 D-mannose binding lectin
S_locus_glycop PF00954 246 - 316 8.4e-08 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 514 - 780 4.8e-31 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 515 - 778 1.8e-42 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 260
AatII GACGTC 1 cut(s) 2214
AccB7I CCANNNNNTGG 3 cut(s) 237, 266, 339
AccI GTMKAC 1 cut(s) 1411
AccII CGCG 2 cut(s) 1534, 2306
AccIII TCCGGA 1 cut(s) 2005
AciI CCGC 6 cut(s) 69, 147, 1002, 1383, 1534, 2105
AclI AACGTT 1 cut(s) 336
AclWI GGATC 3 cut(s) 312, 845, 1243
AcoI YGGCCR 1 cut(s) 243
AcsI RAATTY 1 cut(s) 1361
AcuI CTGAAG 1 cut(s) 342
AcyI GRCGYC 2 cut(s) 642, 2211
AfaI GTAC 3 cut(s) 1055, 1727, 2051
AfiI CCNNNNNNNGG 5 cut(s) 237, 266, 339, 911, 1777
AflII CTTAAG 3 cut(s) 376, 1520, 1955
AgsI TTSAA 8 cut(s) 63, 596, 603, 848, 1027, 1498, 2195, 2231
AjnI CCWGG 2 cut(s) 811, 934
Alw26I GTCTC 9 cut(s) 18, 367, 508, 810, 1212, 1218, 2202, 2295, 2302
AlwI GGATC 3 cut(s) 312, 845, 1243
Ama87I CYCGRG 2 cut(s) 517, 1040
Aor13HI TCCGGA 1 cut(s) 2005
AoxI GGCC 4 cut(s) 243, 634, 804, 1924
ApeKI GCWGC 7 cut(s) 746, 894, 1111, 1170, 1484, 1610, 2344
ApoI RAATTY 1 cut(s) 1361
ArsI GACNNNNNNTTYG 2 cut(s) 2210, 2242
Asp700I GAANNNNTTC 1 cut(s) 922
AspA2I CCTAGG 1 cut(s) 691
AspS9I GGNCC 4 cut(s) 342, 651, 804, 878
AsuC2I CCSGG 1 cut(s) 151
AvaI CYCGRG 2 cut(s) 517, 1040
AvaII GGWCC 3 cut(s) 342, 651, 878
AvrII CCTAGG 1 cut(s) 691
BalI TGGCCA 1 cut(s) 245
BarI GAAGNNNNNNTAC 2 cut(s) 2262, 2294
BbsI GAAGAC 2 cut(s) 766, 2301
BbvI GCAGC 7 cut(s) 758, 906, 1123, 1157, 1471, 1622, 2331
BceAI ACGGC 3 cut(s) 607, 662, 1326
BcgI CGANNNNNNTGC 2 cut(s) 725, 759
BciT130I CCWGG 2 cut(s) 813, 936
BciVI GTATCC 2 cut(s) 1058, 1971
BclI TGATCA 2 cut(s) 1597, 2142
BcnI CCSGG 1 cut(s) 151
BcoDI GTCTC 9 cut(s) 18, 367, 508, 810, 1212, 1218, 2202, 2295, 2302
BfaI CTAG 8 cut(s) 692, 906, 1017, 1212, 1319, 1355, 1802, 1989
BfmI CTRYAG 2 cut(s) 99, 1285
BfrI CTTAAG 3 cut(s) 376, 1520, 1955
BfuI GTATCC 2 cut(s) 1058, 1971
BisI GCNGC 8 cut(s) 747, 895, 1112, 1171, 1485, 1611, 2105, 2345
BlnI CCTAGG 1 cut(s) 691
BlpI GCTNAGC 1 cut(s) 1515
BlsI GCNGC 8 cut(s) 748, 896, 1113, 1172, 1486, 1612, 2106, 2346
Bme1390I CCNGG 3 cut(s) 151, 813, 936
Bme18I GGWCC 3 cut(s) 342, 651, 878
BmeT110I CYCGRG 2 cut(s) 517, 1040
BmgT120I GGNCC 4 cut(s) 342, 651, 804, 878
BmiI GGNNCC 2 cut(s) 1133, 1741
BmrFI CCNGG 3 cut(s) 151, 813, 936
BmrI ACTGGG 1 cut(s) 309
BmsI GCATC 3 cut(s) 1698, 2104, 2325
BmuI ACTGGG 1 cut(s) 309
BoxI GACNNNNGTC 1 cut(s) 324
BpiI GAAGAC 2 cut(s) 766, 2301
BpmI CTGGAG 1 cut(s) 1984
Bpu1102I GCTNAGC 1 cut(s) 1515
BpuMI CCSGG 1 cut(s) 151
BsaHI GRCGYC 2 cut(s) 642, 2211
BsaI GGTCTC 2 cut(s) 1212, 2302
BsaJI CCNNGG 4 cut(s) 623, 691, 1639, 1743
BsaWI WCCGGW 4 cut(s) 911, 1443, 2005, 2084
BsaXI ACNNNNNCTCC 2 cut(s) 1560, 1590
Bsc4I CCNNNNNNNGG 5 cut(s) 237, 266, 339, 911, 1777
Bse118I RCCGGY 1 cut(s) 367
Bse1I ACTGG 6 cut(s) 135, 260, 304, 1354, 1495, 1967
Bse3DI GCAATG 2 cut(s) 1998, 2281
BseAI TCCGGA 1 cut(s) 2005
BseBI CCWGG 2 cut(s) 813, 936
BseDI CCNNGG 4 cut(s) 623, 691, 1639, 1743
BseGI GGATG 6 cut(s) 89, 139, 246, 2033, 2050, 2119
BseLI CCNNNNNNNGG 5 cut(s) 237, 266, 339, 911, 1777
BseMI GCAATG 2 cut(s) 1998, 2281
BseMII CTCAG 2 cut(s) 975, 1506
BseNI ACTGG 6 cut(s) 135, 260, 304, 1354, 1495, 1967
BseRI GAGGAG 4 cut(s) 281, 520, 1575, 1928
BseXI GCAGC 7 cut(s) 758, 906, 1123, 1157, 1471, 1622, 2331
BsgI GTGCAG 2 cut(s) 765, 913
Bsh1236I CGCG 2 cut(s) 1534, 2306
BshFI GGCC 4 cut(s) 245, 636, 806, 1926
BsiHKCI CYCGRG 2 cut(s) 517, 1040
BsiSI CCGG 9 cut(s) 150, 368, 393, 574, 645, 912, 1444, 2006, 2085
BslI CCNNNNNNNGG 5 cut(s) 237, 266, 339, 911, 1777
BsmAI GTCTC 9 cut(s) 18, 367, 508, 810, 1212, 1218, 2202, 2295, 2302
BsmBI CGTCTC 2 cut(s) 2202, 2295
BsmI GAATGC 1 cut(s) 930
BsnI GGCC 4 cut(s) 245, 636, 806, 1926
Bso31I GGTCTC 2 cut(s) 1212, 2302
BsoBI CYCGRG 2 cut(s) 517, 1040
Bsp13I TCCGGA 1 cut(s) 2005
Bsp1407I TGTACA 1 cut(s) 2049
Bsp143I GATC 8 cut(s) 304, 840, 850, 1248, 1401, 1597, 1614, 2142
Bsp1720I GCTNAGC 1 cut(s) 1515
BspACI CCGC 6 cut(s) 69, 147, 1002, 1383, 1534, 2105
BspANI GGCC 4 cut(s) 245, 636, 806, 1926
BspCNI CTCAG 2 cut(s) 976, 1507
BspEI TCCGGA 1 cut(s) 2005
BspFNI CGCG 2 cut(s) 1534, 2306
BspLI GGNNCC 2 cut(s) 1133, 1741
BspPI GGATC 3 cut(s) 312, 845, 1243
BspQI GCTCTTC 2 cut(s) 554, 1331
BspTI CTTAAG 3 cut(s) 376, 1520, 1955
BspTNI GGTCTC 2 cut(s) 1212, 2302
BsrDI GCAATG 2 cut(s) 1998, 2281
BsrFI RCCGGY 1 cut(s) 367
BsrGI TGTACA 1 cut(s) 2049
BsrI ACTGG 6 cut(s) 135, 260, 304, 1354, 1495, 1967
BssAI RCCGGY 1 cut(s) 367
BssECI CCNNGG 4 cut(s) 623, 691, 1639, 1743
BssMI GATC 8 cut(s) 304, 840, 850, 1248, 1401, 1597, 1614, 2142
BssNAI GTATAC 1 cut(s) 1412
BssNI GRCGYC 2 cut(s) 642, 2211
BssT1I CCWWGG 3 cut(s) 691, 1639, 1743
Bst1107I GTATAC 1 cut(s) 1412
Bst2UI CCWGG 2 cut(s) 813, 936
Bst4CI ACNGT 5 cut(s) 251, 590, 769, 800, 1186
Bst6I CTCTTC 4 cut(s) 468, 554, 1331, 1552
BstACI GRCGYC 2 cut(s) 642, 2211
BstAFI CTTAAG 3 cut(s) 376, 1520, 1955
BstAUI TGTACA 1 cut(s) 2049
BstC8I GCNNGC 2 cut(s) 1381, 2129
BstDEI CTNAG 4 cut(s) 984, 1157, 1300, 1515
BstDSI CCRYGG 1 cut(s) 623
BstEII GGTNACC 2 cut(s) 1472, 2080
BstF5I GGATG 6 cut(s) 89, 139, 246, 2033, 2050, 2119
BstFNI CGCG 2 cut(s) 1534, 2306
BstKTI GATC 8 cut(s) 307, 843, 853, 1251, 1404, 1600, 1617, 2145
BstMAI GTCTC 9 cut(s) 18, 367, 508, 810, 1212, 1218, 2202, 2295, 2302
BstMBI GATC 8 cut(s) 304, 840, 850, 1248, 1401, 1597, 1614, 2142
BstMWI GCNNNNNNNGC 4 cut(s) 1036, 1592, 2137, 2344
BstNI CCWGG 2 cut(s) 813, 936
BstNSI RCATGY 3 cut(s) 425, 1002, 2111
BstPAI GACNNNNGTC 1 cut(s) 324
BstPI GGTNACC 2 cut(s) 1472, 2080
BstSCI CCNGG 3 cut(s) 149, 811, 934
BstSFI CTRYAG 2 cut(s) 99, 1285
BstUI CGCG 2 cut(s) 1534, 2306
BstV1I GCAGC 7 cut(s) 758, 906, 1123, 1157, 1471, 1622, 2331
BstV2I GAAGAC 2 cut(s) 766, 2301
BstX2I RGATCY 3 cut(s) 304, 850, 1248
BstYI RGATCY 3 cut(s) 304, 850, 1248
BstZ17I GTATAC 1 cut(s) 1412
BsuI GTATCC 2 cut(s) 1058, 1971
BsuRI GGCC 4 cut(s) 245, 636, 806, 1926
BtgI CCRYGG 1 cut(s) 623
BtsCI GGATG 6 cut(s) 89, 139, 246, 2033, 2050, 2119
BtsI GCAGTG 1 cut(s) 1806
BtsIMutI CAGTG 4 cut(s) 128, 205, 1191, 1806
Cac8I GCNNGC 2 cut(s) 1381, 2129
Cfr10I RCCGGY 1 cut(s) 367
Cfr13I GGNCC 4 cut(s) 342, 651, 804, 878
CseI GACGC 4 cut(s) 329, 650, 1540, 2312
Csp6I GTAC 3 cut(s) 1054, 1726, 2050
CviAII CATG 9 cut(s) 422, 508, 866, 999, 1729, 1736, 1832, 2108, 2146
CviQI GTAC 3 cut(s) 1054, 1726, 2050
DdeI CTNAG 4 cut(s) 984, 1157, 1300, 1515
DpnI GATC 8 cut(s) 306, 842, 852, 1250, 1403, 1599, 1616, 2144
DpnII GATC 8 cut(s) 304, 840, 850, 1248, 1401, 1597, 1614, 2142
DrdI GACNNNNNNGTC 1 cut(s) 260
DseDI GACNNNNNNGTC 1 cut(s) 260
EaeI YGGCCR 1 cut(s) 243
Eam1104I CTCTTC 4 cut(s) 468, 554, 1331, 1552
EarI CTCTTC 4 cut(s) 468, 554, 1331, 1552
EciI GGCGGA 1 cut(s) 58
Eco130I CCWWGG 3 cut(s) 691, 1639, 1743
Eco31I GGTCTC 2 cut(s) 1212, 2302
Eco47I GGWCC 3 cut(s) 342, 651, 878
Eco57I CTGAAG 1 cut(s) 342
Eco88I CYCGRG 2 cut(s) 517, 1040
Eco91I GGTNACC 2 cut(s) 1472, 2080
EcoO65I GGTNACC 2 cut(s) 1472, 2080
EcoRII CCWGG 2 cut(s) 811, 934
EcoT14I CCWWGG 3 cut(s) 691, 1639, 1743
EcoT22I ATGCAT 1 cut(s) 1698
ErhI CCWWGG 3 cut(s) 691, 1639, 1743
Esp3I CGTCTC 2 cut(s) 2202, 2295
FaeI CATG 9 cut(s) 425, 511, 869, 1002, 1732, 1739, 1835, 2111, 2149
FalI AAGNNNNNCTT 2 cut(s) 536, 568
FatI CATG 9 cut(s) 421, 507, 865, 998, 1728, 1735, 1831, 2107, 2145
FauI CCCGC 1 cut(s) 1527
FauNDI CATATG 1 cut(s) 1692
FbaI TGATCA 2 cut(s) 1597, 2142
FblI GTMKAC 1 cut(s) 1411
Fnu4HI GCNGC 8 cut(s) 747, 895, 1112, 1171, 1485, 1611, 2105, 2345
FokI GGATG 6 cut(s) 76, 146, 253, 2020, 2057, 2126
Fsp4HI GCNGC 8 cut(s) 747, 895, 1112, 1171, 1485, 1611, 2105, 2345
FspBI CTAG 8 cut(s) 692, 906, 1017, 1212, 1319, 1355, 1802, 1989
GluI GCNGC 8 cut(s) 747, 895, 1112, 1171, 1485, 1611, 2105, 2345
GsuI CTGGAG 1 cut(s) 1984
HaeIII GGCC 4 cut(s) 245, 636, 806, 1926
HapII CCGG 9 cut(s) 150, 368, 393, 574, 645, 912, 1444, 2006, 2085
HgaI GACGC 4 cut(s) 329, 650, 1540, 2312
Hin1I GRCGYC 2 cut(s) 642, 2211
Hin1II CATG 9 cut(s) 425, 511, 869, 1002, 1732, 1739, 1835, 2111, 2149
HincII GTYRAC 1 cut(s) 1669
HindII GTYRAC 1 cut(s) 1669
HinfI GANTC 8 cut(s) 686, 862, 1013, 1146, 1451, 1494, 1892, 2260
HpaII CCGG 9 cut(s) 150, 368, 393, 574, 645, 912, 1444, 2006, 2085
Hpy188I TCNGA 6 cut(s) 78, 418, 712, 736, 1179, 2202
Hpy99I CGWCG 2 cut(s) 323, 1534
HpyAV CCTTC 7 cut(s) 578, 642, 1519, 1640, 2130, 2225, 2232
HpyCH4III ACNGT 5 cut(s) 251, 590, 769, 800, 1186
HpyCH4IV ACGT 3 cut(s) 65, 336, 2211
HpyF10VI GCNNNNNNNGC 4 cut(s) 1036, 1592, 2137, 2344
HpyF3I CTNAG 4 cut(s) 984, 1157, 1300, 1515
HpySE526I ACGT 3 cut(s) 65, 336, 2211
Hsp92I GRCGYC 2 cut(s) 642, 2211
Hsp92II CATG 9 cut(s) 425, 511, 869, 1002, 1732, 1739, 1835, 2111, 2149
Kpn2I TCCGGA 1 cut(s) 2005
Ksp22I TGATCA 2 cut(s) 1597, 2142
Kzo9I GATC 8 cut(s) 304, 840, 850, 1248, 1401, 1597, 1614, 2142
LguI GCTCTTC 2 cut(s) 554, 1331
LmnI GCTCC 6 cut(s) 418, 1562, 1732, 1941, 1965, 2008
Lsp1109I GCAGC 7 cut(s) 758, 906, 1123, 1157, 1471, 1622, 2331
LweI GCATC 3 cut(s) 1698, 2104, 2325
MaeI CTAG 8 cut(s) 692, 906, 1017, 1212, 1319, 1355, 1802, 1989
MaeII ACGT 3 cut(s) 65, 336, 2211
MaeIII GTNAC 9 cut(s) 251, 829, 938, 1118, 1199, 1345, 1472, 1994, 2080
MalI GATC 8 cut(s) 306, 842, 852, 1250, 1403, 1599, 1616, 2144
MboI GATC 8 cut(s) 304, 840, 850, 1248, 1401, 1597, 1614, 2142
MflI RGATCY 3 cut(s) 304, 850, 1248
MlsI TGGCCA 1 cut(s) 245
MluCI AATT 9 cut(s) 39, 172, 388, 1361, 1551, 1897, 2020, 2162, 2190
MluNI TGGCCA 1 cut(s) 245
MlyI GAGTC 2 cut(s) 1022, 1886
MmeI TCCRAC 4 cut(s) 357, 1369, 2052, 2247
Mox20I TGGCCA 1 cut(s) 245
Mph1103I ATGCAT 1 cut(s) 1698
MroI TCCGGA 1 cut(s) 2005
MroXI GAANNNNTTC 1 cut(s) 922
MscI TGGCCA 1 cut(s) 245
MseI TTAA 7 cut(s) 122, 314, 377, 1521, 1626, 1869, 1956
MslI CAYNNNNRTG 4 cut(s) 1085, 1863, 2112, 2150
Msp20I TGGCCA 1 cut(s) 245
MspA1I CMGCKG 1 cut(s) 1114
MspCI CTTAAG 3 cut(s) 376, 1520, 1955
MspI CCGG 9 cut(s) 150, 368, 393, 574, 645, 912, 1444, 2006, 2085
MspR9I CCNGG 3 cut(s) 151, 813, 936
Mva1269I GAATGC 1 cut(s) 930
MvaI CCWGG 2 cut(s) 813, 936
MvnI CGCG 2 cut(s) 1534, 2306
MwoI GCNNNNNNNGC 4 cut(s) 1036, 1592, 2137, 2344
NciI CCSGG 1 cut(s) 151
NdeI CATATG 1 cut(s) 1692
NdeII GATC 8 cut(s) 304, 840, 850, 1248, 1401, 1597, 1614, 2142
NlaIII CATG 9 cut(s) 425, 511, 869, 1002, 1732, 1739, 1835, 2111, 2149
NlaIV GGNNCC 2 cut(s) 1133, 1741
NmuCI GTSAC 4 cut(s) 251, 829, 1118, 2080
NsiI ATGCAT 1 cut(s) 1698
NspI RCATGY 3 cut(s) 425, 1002, 2111
PaeR7I CTCGAG 1 cut(s) 1040
PciSI GCTCTTC 2 cut(s) 554, 1331
PctI GAATGC 1 cut(s) 930
PdmI GAANNNNTTC 1 cut(s) 922
PfeI GAWTC 6 cut(s) 686, 862, 1146, 1451, 1494, 2260
PflMI CCANNNNNTGG 3 cut(s) 237, 266, 339
PkrI GCNGC 8 cut(s) 748, 896, 1113, 1172, 1486, 1612, 2106, 2346
PleI GAGTC 2 cut(s) 1021, 1886
PpsI GAGTC 2 cut(s) 1021, 1886
PshAI GACNNNNGTC 1 cut(s) 324
Psp1406I AACGTT 1 cut(s) 336
Psp6I CCWGG 2 cut(s) 811, 934
PspEI GGTNACC 2 cut(s) 1472, 2080
PspGI CCWGG 2 cut(s) 811, 934
PspN4I GGNNCC 2 cut(s) 1133, 1741
PspPI GGNCC 4 cut(s) 342, 651, 804, 878
PspXI VCTCGAGB 1 cut(s) 1040
PsuI RGATCY 3 cut(s) 304, 850, 1248
PvuII CAGCTG 1 cut(s) 1114
RsaI GTAC 3 cut(s) 1055, 1727, 2051
RsaNI GTAC 3 cut(s) 1054, 1726, 2050
RseI CAYNNNNRTG 4 cut(s) 1085, 1863, 2112, 2150
SapI GCTCTTC 2 cut(s) 554, 1331
SaqAI TTAA 7 cut(s) 122, 314, 377, 1521, 1626, 1869, 1956
SatI GCNGC 8 cut(s) 747, 895, 1112, 1171, 1485, 1611, 2105, 2345
Sau3AI GATC 8 cut(s) 304, 840, 850, 1248, 1401, 1597, 1614, 2142
Sau96I GGNCC 4 cut(s) 342, 651, 804, 878
SchI GAGTC 2 cut(s) 1022, 1886
ScrFI CCNGG 3 cut(s) 151, 813, 936
SfaNI GCATC 3 cut(s) 1698, 2104, 2325
SfcI CTRYAG 2 cut(s) 99, 1285
Sfr274I CTCGAG 1 cut(s) 1040
SgrAI CRCCGGYG 1 cut(s) 367
SinI GGWCC 3 cut(s) 342, 651, 878
SlaI CTCGAG 1 cut(s) 1040
SmiMI CAYNNNNRTG 4 cut(s) 1085, 1863, 2112, 2150
SmlI CTYRAG 4 cut(s) 376, 1040, 1520, 1955
SmoI CTYRAG 4 cut(s) 376, 1040, 1520, 1955
Sse9I AATT 9 cut(s) 39, 172, 388, 1361, 1551, 1897, 2020, 2162, 2190
SsiI CCGC 6 cut(s) 69, 147, 1002, 1383, 1534, 2105
SspMI CTAG 8 cut(s) 692, 906, 1017, 1212, 1319, 1355, 1802, 1989
StyD4I CCNGG 3 cut(s) 149, 811, 934
StyI CCWWGG 3 cut(s) 691, 1639, 1743
TaaI ACNGT 5 cut(s) 251, 590, 769, 800, 1186
TaiI ACGT 3 cut(s) 68, 339, 2214
TaqI TCGA 8 cut(s) 470, 1034, 1041, 1144, 1398, 1438, 1603, 1973
TasI AATT 9 cut(s) 39, 172, 388, 1361, 1551, 1897, 2020, 2162, 2190
TatI WGTACW 2 cut(s) 1725, 2049
TauI GCSGC 1 cut(s) 2107
TfiI GAWTC 6 cut(s) 686, 862, 1146, 1451, 1494, 2260
Tru1I TTAA 7 cut(s) 122, 314, 377, 1521, 1626, 1869, 1956
Tru9I TTAA 7 cut(s) 122, 314, 377, 1521, 1626, 1869, 1956
TscAI CASTG 4 cut(s) 135, 205, 1191, 1813
TseFI GTSAC 4 cut(s) 251, 829, 1118, 2080
TseI GCWGC 7 cut(s) 746, 894, 1111, 1170, 1484, 1610, 2344
Tsp45I GTSAC 4 cut(s) 251, 829, 1118, 2080
TspDTI ATGAA 5 cut(s) 165, 696, 854, 1644, 1848
TspGWI ACGGA 1 cut(s) 1077
TspRI CASTG 4 cut(s) 135, 205, 1191, 1813
Van91I CCANNNNNTGG 3 cut(s) 237, 266, 339
Vha464I CTTAAG 3 cut(s) 376, 1520, 1955
VpaK11BI GGWCC 3 cut(s) 342, 651, 878
XapI RAATTY 1 cut(s) 1361
XceI RCATGY 3 cut(s) 425, 1002, 2111
XcmI CCANNNNNNNNNTGG 3 cut(s) 238, 263, 819
XhoI CTCGAG 1 cut(s) 1040
XmaJI CCTAGG 1 cut(s) 691
XmiI GTMKAC 1 cut(s) 1411
XmnI GAANNNNTTC 1 cut(s) 922
XspI CTAG 8 cut(s) 692, 906, 1017, 1212, 1319, 1355, 1802, 1989
ZraI GACGTC 1 cut(s) 2212
Zsp2I ATGCAT 1 cut(s) 1698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.