RLG00000010633

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000166
Physical Location & Seq
Reverse (-)
3145847 .. 3148240
2394 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010633

Sequence Viewer

Length: 2394 bp
ATGGCTGCTCTGTTTCACAACCTTCTTCTTTTCCTGGCAATTTATTTCCAAATCTCGTCTTCAACCTCCGACACTCTGAATAAAGGCTCATCCCTATCTGTAGAGAAACCAGACGATGTTTTAAATTCACCGGATGGAGTTTTCACCGCCGGGTTTCACCAAGTCGGCAACAATTCATTTTGCTTTGCTATTTGGTTCAGTGAGCCATTTGATCACTACAAAAACAGAACCATAGTCTGGATGGCCAACCGTGACCAACCAGTCAATGGCAAACACTCAAAGCTCTCCCTCCTCAAAAATGGTGATCTCATCTTAACCGACGCTGGTCAATCCAATGTTTGGTCCACAGCCACCACTTCAGTCTCTCCGGCGAACTTAAGCCTCCACATTTCCGGCAATCTTGTTTTGCTCACCTCGGAGCATGTCATTCTATGGCAGAGCTTTGATTACCCTACTGATACCCTTCTTCCAGACCAACCACTCACCAGCAGCACAATCCTTGTCTCCATGAGAAGCCCGAGCAACCACTCCTCTGGCTTCTACAAGCTCTTCTTTGACAATGACAACCTTCTCCGGCTACTCTTCGACGGTCTTGAGATTTCAAGTTTGTATTGGTTTGAGCCGTGGCTCACAGGCCGAGAAGCCGGAAGGTCCAAAGACAACAACAGTAGAGTTGCCGTGATGGATTCCTTAGGCAAGTTTACTTCTTCAGACAAATATACTTTAATCGCTTCCGATTATGGTGTCGCTTCGCAAAGAAGACTGACGGTTGATTGTGATGGAAATGTTCGGTTGCACAGCCGGGCCAAACCTGGAGACAGATGGGTTGTGACAGGGCAGATCATGGAAGATGCTTGTATGATTCATGGGGTTTGTGGTCCTAATAGTGTGTGTGACTATGAGCCCAGTACTGGAAGAAAATGTTCTTGCATTCCTGGTTACAAAATGGCAAACTATACTGATTGGCATTATGGTTGTGAACCTAAGTTCAATTACACTTGCGGCAGAGGTGAGTCCAGTTTCTTCAAGCTTTCGAGGCTCGACTTTTACGGGTATGATTACGGATACTTCCCCAACTACACATTCATGCAGTGTGAGGATCTCTGTTTGCAGCTGTGTAACTGCAAGGGTTTCCAATACCGTCCCCGCGATAGAATGTATGGCTGTTATCCGAAAACGGTGTTGCTCAATGGATACAGGTCTCCAAGCTCTTCTAAAGACATATATTTGAGAGTGCCAAAGATCCATATGTCATCTTATGGATTGCCACAAGAAGAGAATAGGTTGCGTTGCTTAGATGAGGTGGTTGAGCTAGATAGGAGCTATGAGAAGAGCCATGTAACTGGTCTAGAGAAATTTTTGCTGTGGTTTGCCTGTGGAGTTGGAGGGTTTGAGATCATTTGTATACTTTTGGTTTTGGGTTTAATAACTCAAAATCGGAGAGATTCCAATGGGGATAAGCACGGCTACCTTCTTGCTGCAACTGCATTCAAAAGGTTTAGCTATGCTGAGCTCAAGAAGGCAACACTGGATTTTAGTCAAGAAATTGGAAGAGGAGCTGGAGGTGTTGTTTACAAAGCTATATTGGCTGATCATCGAGTTGCAGCGATTAAGAGGCTTAATGAAACTAACCAAGGAGAAGGTGAGTTTTCAGCAGAAGTCAACACTATTGGGAGGCTGAACCATAAGCATTTGATTGAGATGTGGGGATATTGCTCGGAGGGAAAGCACAGGCTTCTTGTTTATGAGTACATGGAGCATGGTTCCTTGGGACAAAAGTTAGCTTCCAATGCACTTGATTGGGGAAAGAGGTTTGAGATTGCTCTAGGCATTGCAAAGTGTCTTGCTTATTTGCATGAAGAATGTTTGGAGTGGGTTTTACATTGTGATGTTAAGCCTCAAAACATACTCTTGGACTCCAATTATCAACCAAAGGTAGCAGATTTTGGCCTATCTAAGCTACTTAACAGGGATGACCTTAAGAACTGGAGCTTTTCGAGGATACGAGGAACTAGAGGTTACATCGCTCCGGAGTGGGTTTACAATTTGCCTATCACATCCAAAGTGGATGTGTACAGCTATGGGGTTGTGGTGTTGGAGATGGTGACCGGAAAGAACCCGATAAAGCCGGATGTGGATGCCATTGATGGCGAGCAGAGAAGGCTGATCATGTGGGTGAGGGAGGAATTACATAATCGAACTTCTGCTAGTGAAATTGAAGCTCGGATAGGAGACGTCATAGACCCTTCGTTTGAAGGTAATTATGATGTAAAAAAGATGGGGATTCTGTTGGAAGTGGCTTTACATTGCGTAGAGGAAGACAGAGACGCGAGGCCAACTATGAGCCATGTCGTTGAGATACTTGTGCTGCATGACAAAGACCAAGAGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

798

Amino Acids

90.25

Weight (kDa)

6.1

Isoelectric Point (pI)

40.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 77 - 163 1.3e-22 D-mannose binding lectin
S_locus_glycop PF00954 250 - 316 8.1e-08 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 511 - 787 1.4e-38 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 513 - 786 1.1e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 260
AatII GACGTC 1 cut(s) 2238
AccB7I CCANNNNNTGG 3 cut(s) 237, 266, 339
AccI GTMKAC 1 cut(s) 1405
AccII CGCG 2 cut(s) 1149, 2330
AccIII TCCGGA 1 cut(s) 2029
AciI CCGC 3 cut(s) 147, 1002, 1147
AclWI GGATC 2 cut(s) 1107, 1237
AcoI YGGCCR 1 cut(s) 243
AcsI RAATTY 2 cut(s) 124, 1355
AcuI CTGAAG 2 cut(s) 342, 693
AcyI GRCGYC 1 cut(s) 2235
AfaI GTAC 3 cut(s) 910, 1751, 2075
AfiI CCNNNNNNNGG 4 cut(s) 237, 266, 339, 911
AflII CTTAAG 2 cut(s) 376, 1979
AgsI TTSAA 7 cut(s) 63, 603, 991, 1027, 1492, 2219, 2255
AjnI CCWGG 3 cut(s) 33, 811, 934
AjuI GAANNNNNNNTTGG 2 cut(s) 1067, 1099
Alw21I GWGCWC 1 cut(s) 1515
Alw26I GTCTC 6 cut(s) 367, 508, 810, 1206, 2226, 2319
AlwI GGATC 2 cut(s) 1107, 1237
Ama87I CYCGRG 1 cut(s) 517
Aor13HI TCCGGA 1 cut(s) 2029
AoxI GGCC 5 cut(s) 243, 634, 804, 1948, 2333
ApeKI GCWGC 6 cut(s) 5, 489, 1111, 1478, 1604, 2368
ApoI RAATTY 2 cut(s) 124, 1355
ArsI GACNNNNNNTTYG 2 cut(s) 2234, 2266
Asp700I GAANNNNTTC 1 cut(s) 922
AspS9I GGNCC 4 cut(s) 342, 651, 804, 878
AsuC2I CCSGG 2 cut(s) 151, 803
AvaI CYCGRG 1 cut(s) 517
AvaII GGWCC 3 cut(s) 342, 651, 878
AxyI CCTNAGG 1 cut(s) 691
BalI TGGCCA 1 cut(s) 245
BanII GRGCYC 2 cut(s) 906, 1515
BarI GAAGNNNNNNTAC 2 cut(s) 2286, 2318
BbsI GAAGAC 3 cut(s) 51, 766, 2325
Bbv12I GWGCWC 1 cut(s) 1515
BbvI GCAGC 5 cut(s) 501, 1123, 1465, 1616, 2355
BccI CCATC 8 cut(s) 128, 235, 676, 773, 816, 2095, 2141, 2272
BceAI ACGGC 3 cut(s) 607, 662, 1480
BciT130I CCWGG 3 cut(s) 35, 813, 936
BciVI GTATCC 3 cut(s) 1058, 1187, 1995
BclI TGATCA 3 cut(s) 211, 1591, 2166
BcnI CCSGG 2 cut(s) 151, 803
BcoDI GTCTC 6 cut(s) 367, 508, 810, 1206, 2226, 2319
BfaI CTAG 5 cut(s) 1313, 1349, 1826, 2013, 2208
BfmI CTRYAG 1 cut(s) 99
BfrI CTTAAG 2 cut(s) 376, 1979
BfuI GTATCC 3 cut(s) 1058, 1187, 1995
BisI GCNGC 7 cut(s) 6, 490, 1003, 1112, 1479, 1605, 2369
BlpI GCTNAGC 1 cut(s) 1509
BlsI GCNGC 7 cut(s) 7, 491, 1004, 1113, 1480, 1606, 2370
BmcAI AGTACT 1 cut(s) 910
Bme1390I CCNGG 5 cut(s) 35, 151, 803, 813, 936
Bme18I GGWCC 3 cut(s) 342, 651, 878
BmeT110I CYCGRG 1 cut(s) 517
BmgT120I GGNCC 4 cut(s) 342, 651, 804, 878
BmiI GGNNCC 1 cut(s) 1765
BmrFI CCNGG 5 cut(s) 35, 151, 803, 813, 936
BmrI ACTGGG 1 cut(s) 900
BmsI GCATC 2 cut(s) 841, 2128
BmuI ACTGGG 1 cut(s) 900
BoxI GACNNNNGTC 1 cut(s) 324
BpiI GAAGAC 3 cut(s) 51, 766, 2325
BpmI CTGGAG 3 cut(s) 834, 1581, 2008
Bpu1102I GCTNAGC 1 cut(s) 1509
BpuEI CTTGAG 2 cut(s) 614, 1499
BpuMI CCSGG 2 cut(s) 151, 803
BsaHI GRCGYC 1 cut(s) 2235
BsaI GGTCTC 1 cut(s) 1206
BsaJI CCNNGG 4 cut(s) 414, 623, 1633, 1767
BsaWI WCCGGW 3 cut(s) 130, 2029, 2108
BsaXI ACNNNNNCTCC 2 cut(s) 1554, 1584
Bsc4I CCNNNNNNNGG 4 cut(s) 237, 266, 339, 911
Bse1I ACTGG 7 cut(s) 260, 906, 916, 1017, 1348, 1533, 1991
Bse21I CCTNAGG 1 cut(s) 691
Bse3DI GCAATG 2 cut(s) 1830, 2305
BseAI TCCGGA 1 cut(s) 2029
BseBI CCWGG 3 cut(s) 35, 813, 936
BseDI CCNNGG 4 cut(s) 414, 623, 1633, 1767
BseGI GGATG 8 cut(s) 89, 139, 246, 1978, 2057, 2074, 2137, 2143
BseLI CCNNNNNNNGG 4 cut(s) 237, 266, 339, 911
BseMI GCAATG 2 cut(s) 1830, 2305
BseMII CTCAG 1 cut(s) 1500
BseNI ACTGG 7 cut(s) 260, 906, 916, 1017, 1348, 1533, 1991
BseRI GAGGAG 3 cut(s) 281, 520, 1569
BseXI GCAGC 5 cut(s) 501, 1123, 1465, 1616, 2355
Bsh1236I CGCG 2 cut(s) 1149, 2330
BshFI GGCC 5 cut(s) 245, 636, 806, 1950, 2335
BsiHKAI GWGCWC 1 cut(s) 1515
BsiHKCI CYCGRG 1 cut(s) 517
BslFI GGGAC 2 cut(s) 1128, 1785
BslI CCNNNNNNNGG 4 cut(s) 237, 266, 339, 911
BsmAI GTCTC 6 cut(s) 367, 508, 810, 1206, 2226, 2319
BsmBI CGTCTC 2 cut(s) 2226, 2319
BsmFI GGGAC 2 cut(s) 1128, 1785
BsmI GAATGC 2 cut(s) 930, 1487
BsnI GGCC 5 cut(s) 245, 636, 806, 1950, 2335
Bso31I GGTCTC 1 cut(s) 1206
BsoBI CYCGRG 1 cut(s) 517
Bsp1286I GDGCHC 2 cut(s) 906, 1515
Bsp13I TCCGGA 1 cut(s) 2029
Bsp1407I TGTACA 1 cut(s) 2073
Bsp143I GATC 8 cut(s) 211, 304, 840, 1099, 1242, 1395, 1591, 2166
Bsp1720I GCTNAGC 1 cut(s) 1509
BspACI CCGC 3 cut(s) 147, 1002, 1147
BspANI GGCC 5 cut(s) 245, 636, 806, 1950, 2335
BspCNI CTCAG 1 cut(s) 1501
BspEI TCCGGA 1 cut(s) 2029
BspFNI CGCG 2 cut(s) 1149, 2330
BspLI GGNNCC 1 cut(s) 1765
BspPI GGATC 2 cut(s) 1107, 1237
BspQI GCTCTTC 3 cut(s) 554, 1216, 1325
BspTI CTTAAG 2 cut(s) 376, 1979
BspTNI GGTCTC 1 cut(s) 1206
BsrDI GCAATG 2 cut(s) 1830, 2305
BsrGI TGTACA 1 cut(s) 2073
BsrI ACTGG 7 cut(s) 260, 906, 916, 1017, 1348, 1533, 1991
BssECI CCNNGG 4 cut(s) 414, 623, 1633, 1767
BssMI GATC 8 cut(s) 211, 304, 840, 1099, 1242, 1395, 1591, 2166
BssNAI GTATAC 1 cut(s) 1406
BssNI GRCGYC 1 cut(s) 2235
BssT1I CCWWGG 2 cut(s) 1633, 1767
Bst1107I GTATAC 1 cut(s) 1406
Bst2UI CCWGG 3 cut(s) 35, 813, 936
Bst4CI ACNGT 6 cut(s) 251, 590, 668, 769, 1142, 1180
Bst6I CTCTTC 6 cut(s) 554, 587, 1216, 1269, 1325, 1546
BstACI GRCGYC 1 cut(s) 2235
BstAFI CTTAAG 2 cut(s) 376, 1979
BstAUI TGTACA 1 cut(s) 2073
BstC8I GCNNGC 1 cut(s) 2153
BstDEI CTNAG 5 cut(s) 691, 984, 1294, 1509, 1956
BstDSI CCRYGG 1 cut(s) 623
BstEII GGTNACC 1 cut(s) 2104
BstF5I GGATG 8 cut(s) 89, 139, 246, 1978, 2057, 2074, 2137, 2143
BstFNI CGCG 2 cut(s) 1149, 2330
BstKTI GATC 8 cut(s) 214, 307, 843, 1102, 1245, 1398, 1594, 2169
BstMAI GTCTC 6 cut(s) 367, 508, 810, 1206, 2226, 2319
BstMBI GATC 8 cut(s) 211, 304, 840, 1099, 1242, 1395, 1591, 2166
BstMWI GCNNNNNNNGC 5 cut(s) 1036, 1484, 1586, 1790, 2161
BstNI CCWGG 3 cut(s) 35, 813, 936
BstNSI RCATGY 1 cut(s) 425
BstPAI GACNNNNGTC 1 cut(s) 324
BstPI GGTNACC 1 cut(s) 2104
BstSCI CCNGG 5 cut(s) 33, 149, 801, 811, 934
BstSFI CTRYAG 1 cut(s) 99
BstUI CGCG 2 cut(s) 1149, 2330
BstV1I GCAGC 5 cut(s) 501, 1123, 1465, 1616, 2355
BstV2I GAAGAC 3 cut(s) 51, 766, 2325
BstX2I RGATCY 2 cut(s) 1099, 1242
BstXI CCANNNNNNTGG 2 cut(s) 533, 1343
BstYI RGATCY 2 cut(s) 1099, 1242
BstZ17I GTATAC 1 cut(s) 1406
Bsu36I CCTNAGG 1 cut(s) 691
BsuI GTATCC 3 cut(s) 1058, 1187, 1995
BsuRI GGCC 5 cut(s) 245, 636, 806, 1950, 2335
BtgI CCRYGG 1 cut(s) 623
BtgZI GCGATG 1 cut(s) 2008
BtsCI GGATG 8 cut(s) 89, 139, 246, 1978, 2057, 2074, 2137, 2143
BtsI GCAGTG 1 cut(s) 1097
BtsIMutI CAGTG 3 cut(s) 205, 1097, 1526
Cac8I GCNNGC 1 cut(s) 2153
Cfr13I GGNCC 4 cut(s) 342, 651, 804, 878
CseI GACGC 2 cut(s) 329, 2336
Csp6I GTAC 3 cut(s) 909, 1750, 2074
CviQI GTAC 3 cut(s) 909, 1750, 2074
DdeI CTNAG 5 cut(s) 691, 984, 1294, 1509, 1956
DpnI GATC 8 cut(s) 213, 306, 842, 1101, 1244, 1397, 1593, 2168
DpnII GATC 8 cut(s) 211, 304, 840, 1099, 1242, 1395, 1591, 2166
DraI TTTAAA 1 cut(s) 123
DrdI GACNNNNNNGTC 1 cut(s) 260
DseDI GACNNNNNNGTC 1 cut(s) 260
EaeI YGGCCR 1 cut(s) 243
Eam1104I CTCTTC 6 cut(s) 554, 587, 1216, 1269, 1325, 1546
EarI CTCTTC 6 cut(s) 554, 587, 1216, 1269, 1325, 1546
Ecl136II GAGCTC 1 cut(s) 1513
Eco130I CCWWGG 2 cut(s) 1633, 1767
Eco24I GRGCYC 2 cut(s) 906, 1515
Eco31I GGTCTC 1 cut(s) 1206
Eco47I GGWCC 3 cut(s) 342, 651, 878
Eco53kI GAGCTC 1 cut(s) 1513
Eco57I CTGAAG 2 cut(s) 342, 693
Eco81I CCTNAGG 1 cut(s) 691
Eco88I CYCGRG 1 cut(s) 517
Eco91I GGTNACC 1 cut(s) 2104
EcoICRI GAGCTC 1 cut(s) 1513
EcoO65I GGTNACC 1 cut(s) 2104
EcoRII CCWGG 3 cut(s) 33, 811, 934
EcoT14I CCWWGG 2 cut(s) 1633, 1767
EcoT38I GRGCYC 2 cut(s) 906, 1515
ErhI CCWWGG 2 cut(s) 1633, 1767
Esp3I CGTCTC 2 cut(s) 2226, 2319
FalI AAGNNNNNCTT 2 cut(s) 536, 568
FaqI GGGAC 2 cut(s) 1128, 1785
FauI CCCGC 1 cut(s) 1154
FauNDI CATATG 1 cut(s) 1248
FbaI TGATCA 3 cut(s) 211, 1591, 2166
FblI GTMKAC 1 cut(s) 1405
Fnu4HI GCNGC 7 cut(s) 6, 490, 1003, 1112, 1479, 1605, 2369
FokI GGATG 8 cut(s) 76, 146, 253, 1985, 2044, 2081, 2144, 2150
FriOI GRGCYC 2 cut(s) 906, 1515
Fsp4HI GCNGC 7 cut(s) 6, 490, 1003, 1112, 1479, 1605, 2369
FspBI CTAG 5 cut(s) 1313, 1349, 1826, 2013, 2208
GluI GCNGC 7 cut(s) 6, 490, 1003, 1112, 1479, 1605, 2369
GsuI CTGGAG 3 cut(s) 834, 1581, 2008
HaeIII GGCC 5 cut(s) 245, 636, 806, 1950, 2335
HgaI GACGC 2 cut(s) 329, 2336
Hin1I GRCGYC 1 cut(s) 2235
HincII GTYRAC 1 cut(s) 1663
HindII GTYRAC 1 cut(s) 1663
HindIII AAGCTT 1 cut(s) 1028
HinfI GANTC 6 cut(s) 686, 862, 1013, 1445, 1916, 2284
Hpy166II GTNNAC 8 cut(s) 345, 702, 980, 1406, 1573, 1663, 2041, 2074
Hpy188I TCNGA 9 cut(s) 70, 78, 418, 712, 736, 1173, 1440, 1720, 2226
Hpy188III TCNNGA 7 cut(s) 238, 470, 593, 1349, 1516, 1541, 2030
Hpy8I GTNNAC 8 cut(s) 345, 702, 980, 1406, 1573, 1663, 2041, 2074
Hpy99I CGWCG 2 cut(s) 323, 590
HpyCH4III ACNGT 6 cut(s) 251, 590, 668, 769, 1142, 1180
HpyCH4IV ACGT 1 cut(s) 2235
HpyF10VI GCNNNNNNNGC 5 cut(s) 1036, 1484, 1586, 1790, 2161
HpyF3I CTNAG 5 cut(s) 691, 984, 1294, 1509, 1956
HpySE526I ACGT 1 cut(s) 2235
Hsp92I GRCGYC 1 cut(s) 2235
Kpn2I TCCGGA 1 cut(s) 2029
Ksp22I TGATCA 3 cut(s) 211, 1591, 2166
Kzo9I GATC 8 cut(s) 211, 304, 840, 1099, 1242, 1395, 1591, 2166
LguI GCTCTTC 3 cut(s) 554, 1216, 1325
LmnI GCTCC 6 cut(s) 418, 1320, 1556, 1756, 1989, 2032
Lsp1109I GCAGC 5 cut(s) 501, 1123, 1465, 1616, 2355
LweI GCATC 2 cut(s) 841, 2128
MaeI CTAG 5 cut(s) 1313, 1349, 1826, 2013, 2208
MaeII ACGT 1 cut(s) 2235
MaeIII GTNAC 8 cut(s) 251, 829, 893, 938, 1118, 1339, 2018, 2104
MalI GATC 8 cut(s) 213, 306, 842, 1101, 1244, 1397, 1593, 2168
MboI GATC 8 cut(s) 211, 304, 840, 1099, 1242, 1395, 1591, 2166
MflI RGATCY 2 cut(s) 1099, 1242
MhlI GDGCHC 2 cut(s) 906, 1515
MlsI TGGCCA 1 cut(s) 245
MluNI TGGCCA 1 cut(s) 245
MlyI GAGTC 2 cut(s) 1022, 1910
MmeI TCCRAC 4 cut(s) 93, 1363, 2076, 2271
Mox20I TGGCCA 1 cut(s) 245
MroI TCCGGA 1 cut(s) 2029
MroXI GAANNNNTTC 1 cut(s) 922
MscI TGGCCA 1 cut(s) 245
MslI CAYNNNNRTG 3 cut(s) 1085, 1887, 2174
Msp20I TGGCCA 1 cut(s) 245
MspA1I CMGCKG 1 cut(s) 1114
MspCI CTTAAG 2 cut(s) 376, 1979
MspR9I CCNGG 5 cut(s) 35, 151, 803, 813, 936
Mva1269I GAATGC 2 cut(s) 930, 1487
MvaI CCWGG 3 cut(s) 35, 813, 936
MvnI CGCG 2 cut(s) 1149, 2330
MwoI GCNNNNNNNGC 5 cut(s) 1036, 1484, 1586, 1790, 2161
NciI CCSGG 2 cut(s) 151, 803
NdeI CATATG 1 cut(s) 1248
NdeII GATC 8 cut(s) 211, 304, 840, 1099, 1242, 1395, 1591, 2166
NlaIV GGNNCC 1 cut(s) 1765
NmeAIII GCCGAG 1 cut(s) 662
NmuCI GTSAC 4 cut(s) 251, 829, 893, 2104
NspI RCATGY 1 cut(s) 425
PciSI GCTCTTC 3 cut(s) 554, 1216, 1325
PctI GAATGC 2 cut(s) 930, 1487
PdmI GAANNNNTTC 1 cut(s) 922
PfeI GAWTC 4 cut(s) 686, 862, 1445, 2284
PflMI CCANNNNNTGG 3 cut(s) 237, 266, 339
PkrI GCNGC 7 cut(s) 7, 491, 1004, 1113, 1480, 1606, 2370
PleI GAGTC 2 cut(s) 1021, 1910
PpsI GAGTC 2 cut(s) 1021, 1910
PshAI GACNNNNGTC 1 cut(s) 324
Psp124BI GAGCTC 1 cut(s) 1515
Psp6I CCWGG 3 cut(s) 33, 811, 934
PspEI GGTNACC 1 cut(s) 2104
PspGI CCWGG 3 cut(s) 33, 811, 934
PspN4I GGNNCC 1 cut(s) 1765
PspPI GGNCC 4 cut(s) 342, 651, 804, 878
PsuI RGATCY 2 cut(s) 1099, 1242
PvuII CAGCTG 1 cut(s) 1114
RsaI GTAC 3 cut(s) 910, 1751, 2075
RsaNI GTAC 3 cut(s) 909, 1750, 2074
RseI CAYNNNNRTG 3 cut(s) 1085, 1887, 2174
SacI GAGCTC 1 cut(s) 1515
SapI GCTCTTC 3 cut(s) 554, 1216, 1325
SatI GCNGC 7 cut(s) 6, 490, 1003, 1112, 1479, 1605, 2369
Sau3AI GATC 8 cut(s) 211, 304, 840, 1099, 1242, 1395, 1591, 2166
Sau96I GGNCC 4 cut(s) 342, 651, 804, 878
ScaI AGTACT 1 cut(s) 910
SchI GAGTC 2 cut(s) 1022, 1910
ScrFI CCNGG 5 cut(s) 35, 151, 803, 813, 936
SduI GDGCHC 2 cut(s) 906, 1515
SfaNI GCATC 2 cut(s) 841, 2128
SfcI CTRYAG 1 cut(s) 99
SinI GGWCC 3 cut(s) 342, 651, 878
SmiMI CAYNNNNRTG 3 cut(s) 1085, 1887, 2174
SmlI CTYRAG 4 cut(s) 376, 593, 1514, 1979
SmoI CTYRAG 4 cut(s) 376, 593, 1514, 1979
SsiI CCGC 3 cut(s) 147, 1002, 1147
SspMI CTAG 5 cut(s) 1313, 1349, 1826, 2013, 2208
SstI GAGCTC 1 cut(s) 1515
StyD4I CCNGG 5 cut(s) 33, 149, 801, 811, 934
StyI CCWWGG 2 cut(s) 1633, 1767
TaaI ACNGT 6 cut(s) 251, 590, 668, 769, 1142, 1180
TaiI ACGT 1 cut(s) 2238
TaqI TCGA 6 cut(s) 585, 1034, 1041, 1597, 1997, 2197
TatI WGTACW 3 cut(s) 908, 1749, 2073
TauI GCSGC 1 cut(s) 1005
TfiI GAWTC 4 cut(s) 686, 862, 1445, 2284
TscAI CASTG 3 cut(s) 205, 1097, 1533
TseFI GTSAC 4 cut(s) 251, 829, 893, 2104
TseI GCWGC 6 cut(s) 5, 489, 1111, 1478, 1604, 2368
Tsp45I GTSAC 4 cut(s) 251, 829, 893, 2104
TspDTI ATGAA 5 cut(s) 165, 854, 1075, 1638, 1872
TspGWI ACGGA 1 cut(s) 1077
TspRI CASTG 3 cut(s) 205, 1097, 1533
Van91I CCANNNNNTGG 3 cut(s) 237, 266, 339
Vha464I CTTAAG 2 cut(s) 376, 1979
VpaK11BI GGWCC 3 cut(s) 342, 651, 878
XapI RAATTY 2 cut(s) 124, 1355
XbaI TCTAGA 1 cut(s) 1348
XceI RCATGY 1 cut(s) 425
XcmI CCANNNNNNNNNTGG 2 cut(s) 238, 263
XmiI GTMKAC 1 cut(s) 1405
XmnI GAANNNNTTC 1 cut(s) 922
XspI CTAG 5 cut(s) 1313, 1349, 1826, 2013, 2208
ZraI GACGTC 1 cut(s) 2236
ZrmI AGTACT 1 cut(s) 910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.