RLG00000001261

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000166
Physical Location & Seq
Forward (+)
13112543 .. 13121013
8471 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001261

Sequence Viewer

Length: 1827 bp
ATGGATCCTCTGTTTCTCATTCTACTTCTCTCTCTGGCCATCACTTCTCCAACTTCATCTTCAATCTCCGACGCATTGACTGAAGGGTCATCCCTCTCTGTAGAGAAACCAGAAGATGTTCTGATTTCAACTGCTGGTGTTTTCACCGCCGACTTTCATCAAGTTGGCAACAACTCATATTGCTTTGCTATTTGGTTCAATGAGCCATCATCATCGTCATCACCAGTCTCCTACCAGAACCGAACTATAGTCTGGATGGCAAATCGTGACCAACCAGTCAACGGGAAGCATTCAAAGCTCTCCCTCCTCAAAACTGGTAATCTCATCTTAACTGATGCTGCTCAATCCCATACGAAGGTTGTTCTATGGCAGAGCTTTGACTTCCCAACTGATACCCTTCTTCCACTCCAACCATTCACCAGAACCGCCATACTTGTCTCCTCCAGAAGTCAGAGCAACTTCTCTTCTGGCTTCTATAAGCTATTCTTCGACAATGATAACCTTCTCCGACTACTCTTTGACGGCCCTGAGATTTCCAGTGTCTACTGGCCCAACCCTGCATATGTGAGCTGGGATAATGCAAGGTCTACTTACAACAACAGCAGAACTACCGTGCTTGATTCCTTGGGCAGTTTTGCCTCTTTGGACAATCTGACTTTTCTTGCAGCTGATTATGCCAAAAAAAAGCCAAGAGACAGTTGGGTGGTTTCATGGCAAGCCTTTTCAGACCCTTGTGTGATTCATGGAATTTGTGGAGCTAACAGCCTCTGCAGCTACGATCCCAGTTCTGGGAGGAAATGCTCTTGCCTTCCAGGATATCAGATGGAAAATCATATTGATTGGTCTGTGGGGTGTCAACCGAAGTTTCAATTCTCTTATGTAGAAGGTGGGTCTCGTTTTCTCCAACTTACGCAAGTTGAGTTCTATGGTTACGATTATAATGAGTACCAAAATTATAGCTATGGTGATTGTGAGAAAAGATGCTTGGAACTGGATAACTGCAAGGGGTTTCAGTACACGTTTGATTCTGGTGTTTATAAGTGTAATCCCAAGACGCAGTTGCGAAGTGGGCACAGGTGGAACACTCAAGGTTACTTCTATCTGAGACTGCCCAAGGCTCACCTCTTATATAACACAGACATAAAGCCCCTGAAGAACCTTGGTTTTAGTTGCACAGAAAAAGTTGTTGATCTCGAGAGGGAGTATGTTAAAGATCGAGTCAGTAAGCCGGTGAAATTCCTGCTCTGGTTTGCCTATGGAGTTGGGGGAGTTGAAATCATTTGTGTCATTTTGGTTTGGGGTTTATTGAGCAGTACATTCTCAAAATCAAATGAAGATATTCACGGCTACCTTCTTACTGCAACCGGGTTCAAAAGATTTAGCTACGCTGAGCTCAAGACTGCAACGCGGGGTGGTTTTAGTGAAGAAATTGGGAGAGGAGCAGGAGGAGTTGTTTACAAAGGCATATTGGCTGATCAGCGAGTGGCAGCGATTAAGCTGCTCAGTGAAGCTAACCAAGCCGAAGCAGAATTTCTAGCAGAAGCTAGTACTATTGGGAAGGTGAATCATATGAACTTGATCGAGATGTGGGGATATTGCTCAGAGGTAAAGCACAGGCTTCTTGTTTATGAGTACATGGAGCATGGTTCCTTGGCACAGAAGTTAGCTTCCCATGAGCTTGATTGGGAGAAGAGGTTTGAGATTGCTGTCGGCACTGCAAAGGGTCTAGCTTATTTGCACGAAGAGTGCTTGGAGTGGGTTCTACATTGTGATGTAAAGCCTCAAAACATACTGTTGGACTCCAATTTTCAACCAAAGTTTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

609

Amino Acids

68.54

Weight (kDa)

6.04

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 82 - 116 5e-06 D-mannose binding lectin
B_lectin PF01453 98 - 139 2.5e-08 D-mannose binding lectin
S_locus_glycop PF00954 229 - 276 6.7e-06 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 473 - 603 9.1e-23 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 474 - 603 4.7e-25 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 939, 1038
AasI GACNNNNNNGTC 2 cut(s) 85, 275
AccI GTMKAC 2 cut(s) 543, 587
AccII CGCG 1 cut(s) 1408
AciI CCGC 3 cut(s) 147, 426, 1408
AclWI GGATC 2 cut(s) 12, 773
AcoI YGGCCR 1 cut(s) 36
AcsI RAATTY 3 cut(s) 747, 1235, 1529
AcuI CTGAAG 2 cut(s) 102, 1172
AfaI GTAC 5 cut(s) 947, 1016, 1315, 1549, 1634
AfiI CCNNNNNNNGG 4 cut(s) 281, 355, 788, 789
AflIII ACRYGT 1 cut(s) 1017
AgsI TTSAA 8 cut(s) 63, 129, 199, 294, 869, 1274, 1372, 1811
AjnI CCWGG 1 cut(s) 811
AjuI GAANNNNNNNTTGG 4 cut(s) 43, 75, 968, 1000
Alw21I GWGCWC 1 cut(s) 1395
Alw26I GTCTC 5 cut(s) 232, 442, 687, 897, 1099
AlwI GGATC 2 cut(s) 12, 773
AlwNI CAGNNNCTG 1 cut(s) 768
Ama87I CYCGRG 1 cut(s) 1193
AoxI GGCC 3 cut(s) 36, 523, 548
ApeKI GCWGC 5 cut(s) 338, 665, 771, 1487, 1498
ApoI RAATTY 3 cut(s) 747, 1235, 1529
Asp700I GAANNNNTTC 2 cut(s) 117, 1338
AspS9I GGNCC 2 cut(s) 524, 549
AsuC2I CCSGG 1 cut(s) 1366
AsuHPI GGTGA 7 cut(s) 136, 213, 409, 977, 1112, 1243, 1573
AvaI CYCGRG 1 cut(s) 1193
BaeGI GKGCMC 1 cut(s) 1074
BalI TGGCCA 1 cut(s) 38
BamHI GGATCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 1395
Bbv12I GWGCWC 1 cut(s) 1395
BbvI GCAGC 5 cut(s) 325, 677, 783, 1485, 1499
BccI CCATC 4 cut(s) 47, 214, 250, 817
BceAI ACGGC 2 cut(s) 538, 1360
BcgI CGANNNNNNTGC 2 cut(s) 1480, 1514
BciT130I CCWGG 1 cut(s) 813
BclI TGATCA 1 cut(s) 1474
BcnI CCSGG 1 cut(s) 1366
BcoDI GTCTC 5 cut(s) 232, 442, 687, 897, 1099
BfaI CTAG 3 cut(s) 1535, 1545, 1727
BfmI CTRYAG 3 cut(s) 99, 246, 769
BisI GCNGC 5 cut(s) 339, 666, 772, 1488, 1499
BlpI GCTNAGC 1 cut(s) 1389
BlsI GCNGC 5 cut(s) 340, 667, 773, 1489, 1500
BmcAI AGTACT 1 cut(s) 1549
Bme1390I CCNGG 2 cut(s) 813, 1366
BmeT110I CYCGRG 1 cut(s) 1193
BmgT120I GGNCC 2 cut(s) 524, 549
BmiI GGNNCC 2 cut(s) 6, 1648
BmrFI CCNGG 2 cut(s) 813, 1366
BmrI ACTGGG 1 cut(s) 777
BmsI GCATC 2 cut(s) 325, 971
BmuI ACTGGG 1 cut(s) 777
BpmI CTGGAG 1 cut(s) 427
Bpu1102I GCTNAGC 1 cut(s) 1389
BpuEI CTTGAG 2 cut(s) 1071, 1379
BpuMI CCSGG 1 cut(s) 1366
BsaI GGTCTC 1 cut(s) 897
BsaJI CCNNGG 4 cut(s) 624, 1113, 1159, 1650
BsaXI ACNNNNNCTCC 4 cut(s) 1437, 1467, 1679, 1709
Bsc4I CCNNNNNNNGG 4 cut(s) 281, 355, 788, 789
Bse118I RCCGGY 1 cut(s) 1228
Bse1I ACTGG 7 cut(s) 224, 275, 319, 537, 551, 783, 996
BseBI CCWGG 1 cut(s) 813
BseDI CCNNGG 4 cut(s) 624, 1113, 1159, 1650
BseGI GGATG 2 cut(s) 89, 261
BseLI CCNNNNNNNGG 4 cut(s) 281, 355, 788, 789
BseMII CTCAG 5 cut(s) 519, 1094, 1380, 1516, 1614
BseNI ACTGG 7 cut(s) 224, 275, 319, 537, 551, 783, 996
BseRI GAGGAG 4 cut(s) 296, 430, 1452, 1461
BseSI GKGCMC 1 cut(s) 1074
BseXI GCAGC 5 cut(s) 325, 677, 783, 1485, 1499
BseYI CCCAGC 1 cut(s) 570
Bsh1236I CGCG 1 cut(s) 1408
BshFI GGCC 3 cut(s) 38, 525, 550
BsiHKAI GWGCWC 1 cut(s) 1395
BsiHKCI CYCGRG 1 cut(s) 1193
BsiSI CCGG 2 cut(s) 1229, 1365
BslI CCNNNNNNNGG 4 cut(s) 281, 355, 788, 789
BsmAI GTCTC 5 cut(s) 232, 442, 687, 897, 1099
BsmI GAATGC 1 cut(s) 289
BsnI GGCC 3 cut(s) 38, 525, 550
Bso31I GGTCTC 1 cut(s) 897
BsoBI CYCGRG 1 cut(s) 1193
Bsp1286I GDGCHC 2 cut(s) 1074, 1395
Bsp143I GATC 6 cut(s) 4, 778, 1189, 1213, 1474, 1578
Bsp1720I GCTNAGC 1 cut(s) 1389
BspACI CCGC 3 cut(s) 147, 426, 1408
BspANI GGCC 3 cut(s) 38, 525, 550
BspCNI CTCAG 5 cut(s) 520, 1095, 1381, 1515, 1613
BspFNI CGCG 1 cut(s) 1408
BspLI GGNNCC 2 cut(s) 6, 1648
BspMAI CTGCAG 1 cut(s) 773
BspPI GGATC 2 cut(s) 12, 773
BspTNI GGTCTC 1 cut(s) 897
BsrFI RCCGGY 1 cut(s) 1228
BsrI ACTGG 7 cut(s) 224, 275, 319, 537, 551, 783, 996
BssAI RCCGGY 1 cut(s) 1228
BssECI CCNNGG 4 cut(s) 624, 1113, 1159, 1650
BssMI GATC 6 cut(s) 4, 778, 1189, 1213, 1474, 1578
BssT1I CCWWGG 4 cut(s) 624, 1113, 1159, 1650
Bst2UI CCWGG 1 cut(s) 813
Bst4CI ACNGT 3 cut(s) 613, 698, 1794
Bst6I CTCTTC 3 cut(s) 469, 1685, 1737
BstC8I GCNNGC 1 cut(s) 717
BstDEI CTNAG 5 cut(s) 528, 1103, 1389, 1502, 1600
BstF5I GGATG 2 cut(s) 89, 261
BstFNI CGCG 1 cut(s) 1408
BstKTI GATC 6 cut(s) 7, 781, 1192, 1216, 1477, 1581
BstMAI GTCTC 5 cut(s) 232, 442, 687, 897, 1099
BstMBI GATC 6 cut(s) 4, 778, 1189, 1213, 1474, 1578
BstMWI GCNNNNNNNGC 5 cut(s) 295, 674, 771, 1069, 1517
BstNI CCWGG 1 cut(s) 813
BstSCI CCNGG 2 cut(s) 811, 1364
BstSFI CTRYAG 3 cut(s) 99, 246, 769
BstSLI GKGCMC 1 cut(s) 1074
BstUI CGCG 1 cut(s) 1408
BstV1I GCAGC 5 cut(s) 325, 677, 783, 1485, 1499
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
BsuRI GGCC 3 cut(s) 38, 525, 550
BtsCI GGATG 2 cut(s) 89, 261
BtsI GCAGTG 1 cut(s) 1713
BtsIMutI CAGTG 3 cut(s) 544, 1510, 1713
Cac8I GCNNGC 1 cut(s) 717
CaiI CAGNNNCTG 1 cut(s) 768
Cfr10I RCCGGY 1 cut(s) 1228
Cfr13I GGNCC 2 cut(s) 524, 549
CseI GACGC 2 cut(s) 80, 1063
Csp6I GTAC 5 cut(s) 946, 1015, 1314, 1548, 1633
CviAII CATG 5 cut(s) 711, 743, 1636, 1643, 1673
CviQI GTAC 5 cut(s) 946, 1015, 1314, 1548, 1633
DdeI CTNAG 5 cut(s) 528, 1103, 1389, 1502, 1600
DpnI GATC 6 cut(s) 6, 780, 1191, 1215, 1476, 1580
DpnII GATC 6 cut(s) 4, 778, 1189, 1213, 1474, 1578
DrdI GACNNNNNNGTC 2 cut(s) 85, 275
DseDI GACNNNNNNGTC 2 cut(s) 85, 275
EaeI YGGCCR 1 cut(s) 36
Eam1104I CTCTTC 3 cut(s) 469, 1685, 1737
EarI CTCTTC 3 cut(s) 469, 1685, 1737
Ecl136II GAGCTC 1 cut(s) 1393
Eco130I CCWWGG 4 cut(s) 624, 1113, 1159, 1650
Eco24I GRGCYC 1 cut(s) 1395
Eco31I GGTCTC 1 cut(s) 897
Eco32I GATATC 1 cut(s) 818
Eco53kI GAGCTC 1 cut(s) 1393
Eco57I CTGAAG 2 cut(s) 102, 1172
Eco88I CYCGRG 1 cut(s) 1193
EcoICRI GAGCTC 1 cut(s) 1393
EcoRII CCWGG 1 cut(s) 811
EcoRV GATATC 1 cut(s) 818
EcoT14I CCWWGG 4 cut(s) 624, 1113, 1159, 1650
EcoT38I GRGCYC 1 cut(s) 1395
ErhI CCWWGG 4 cut(s) 624, 1113, 1159, 1650
FaeI CATG 5 cut(s) 714, 746, 1639, 1646, 1676
FalI AAGNNNNNCTT 4 cut(s) 470, 502, 574, 606
FatI CATG 5 cut(s) 710, 742, 1635, 1642, 1672
FauI CCCGC 1 cut(s) 1401
FauNDI CATATG 2 cut(s) 562, 1569
FbaI TGATCA 1 cut(s) 1474
FblI GTMKAC 2 cut(s) 543, 587
Fnu4HI GCNGC 5 cut(s) 339, 666, 772, 1488, 1499
FokI GGATG 2 cut(s) 76, 268
FriOI GRGCYC 1 cut(s) 1395
Fsp4HI GCNGC 5 cut(s) 339, 666, 772, 1488, 1499
FspBI CTAG 3 cut(s) 1535, 1545, 1727
GluI GCNGC 5 cut(s) 339, 666, 772, 1488, 1499
GsaI CCCAGC 1 cut(s) 574
GsuI CTGGAG 1 cut(s) 427
HaeIII GGCC 3 cut(s) 38, 525, 550
HapII CCGG 2 cut(s) 1229, 1365
HgaI GACGC 2 cut(s) 80, 1063
Hin1II CATG 5 cut(s) 714, 746, 1639, 1646, 1676
HincII GTYRAC 2 cut(s) 280, 857
HindII GTYRAC 2 cut(s) 280, 857
HinfI GANTC 6 cut(s) 620, 739, 1025, 1218, 1564, 1799
HpaII CCGG 2 cut(s) 1229, 1365
HphI GGTGA 7 cut(s) 136, 213, 409, 977, 1112, 1243, 1573
Hpy166II GTNNAC 6 cut(s) 280, 544, 588, 857, 1017, 1456
Hpy188I TCNGA 9 cut(s) 70, 123, 453, 509, 654, 727, 822, 1104, 1603
Hpy188III TCNNGA 7 cut(s) 253, 266, 444, 1193, 1195, 1396, 1582
Hpy8I GTNNAC 6 cut(s) 280, 544, 588, 857, 1017, 1456
Hpy99I CGWCG 1 cut(s) 74
HpyAV CCTTC 8 cut(s) 77, 349, 407, 512, 818, 878, 1361, 1552
HpyCH4III ACNGT 3 cut(s) 613, 698, 1794
HpyCH4IV ACGT 1 cut(s) 1019
HpyF10VI GCNNNNNNNGC 5 cut(s) 295, 674, 771, 1069, 1517
HpyF3I CTNAG 5 cut(s) 528, 1103, 1389, 1502, 1600
HpySE526I ACGT 1 cut(s) 1019
Hsp92II CATG 5 cut(s) 714, 746, 1639, 1646, 1676
Ksp22I TGATCA 1 cut(s) 1474
Kzo9I GATC 6 cut(s) 4, 778, 1189, 1213, 1474, 1578
LmnI GCTCC 3 cut(s) 755, 1439, 1639
Lsp1109I GCAGC 5 cut(s) 325, 677, 783, 1485, 1499
LweI GCATC 2 cut(s) 325, 971
MaeI CTAG 3 cut(s) 1535, 1545, 1727
MaeII ACGT 1 cut(s) 1019
MaeIII GTNAC 3 cut(s) 266, 929, 1091
MalI GATC 6 cut(s) 6, 780, 1191, 1215, 1476, 1580
MboI GATC 6 cut(s) 4, 778, 1189, 1213, 1474, 1578
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 2 cut(s) 1074, 1395
MlsI TGGCCA 1 cut(s) 38
MluCI AATT 7 cut(s) 747, 869, 952, 1235, 1428, 1529, 1804
MluNI TGGCCA 1 cut(s) 38
MlyI GAGTC 2 cut(s) 1227, 1793
MmeI TCCRAC 6 cut(s) 74, 93, 433, 532, 928, 1776
Mox20I TGGCCA 1 cut(s) 38
MroXI GAANNNNTTC 2 cut(s) 117, 1338
MscI TGGCCA 1 cut(s) 38
MseI TTAA 4 cut(s) 329, 1209, 1494, 1825
MslI CAYNNNNRTG 1 cut(s) 1770
Msp20I TGGCCA 1 cut(s) 38
MspA1I CMGCKG 1 cut(s) 668
MspI CCGG 2 cut(s) 1229, 1365
MspR9I CCNGG 2 cut(s) 813, 1366
Mva1269I GAATGC 1 cut(s) 289
MvaI CCWGG 1 cut(s) 813
MvnI CGCG 1 cut(s) 1408
MwoI GCNNNNNNNGC 5 cut(s) 295, 674, 771, 1069, 1517
NciI CCSGG 1 cut(s) 1366
NdeI CATATG 2 cut(s) 562, 1569
NdeII GATC 6 cut(s) 4, 778, 1189, 1213, 1474, 1578
NlaIII CATG 5 cut(s) 714, 746, 1639, 1646, 1676
NlaIV GGNNCC 2 cut(s) 6, 1648
NmuCI GTSAC 1 cut(s) 266
PaeR7I CTCGAG 1 cut(s) 1193
PctI GAATGC 1 cut(s) 289
PdmI GAANNNNTTC 2 cut(s) 117, 1338
PfeI GAWTC 4 cut(s) 620, 739, 1025, 1564
PfoI TCCNGGA 1 cut(s) 811
PkrI GCNGC 5 cut(s) 340, 667, 773, 1489, 1500
PleI GAGTC 2 cut(s) 1226, 1793
PpsI GAGTC 2 cut(s) 1226, 1793
PsiI TTATAA 2 cut(s) 939, 1038
Psp124BI GAGCTC 1 cut(s) 1395
Psp6I CCWGG 1 cut(s) 811
PspFI CCCAGC 1 cut(s) 570
PspGI CCWGG 1 cut(s) 811
PspN4I GGNNCC 2 cut(s) 6, 1648
PspPI GGNCC 2 cut(s) 524, 549
PstI CTGCAG 1 cut(s) 773
PstNI CAGNNNCTG 1 cut(s) 768
PsuI RGATCY 1 cut(s) 4
PvuII CAGCTG 1 cut(s) 668
RsaI GTAC 5 cut(s) 947, 1016, 1315, 1549, 1634
RsaNI GTAC 5 cut(s) 946, 1015, 1314, 1548, 1633
RseI CAYNNNNRTG 1 cut(s) 1770
SacI GAGCTC 1 cut(s) 1395
SaqAI TTAA 4 cut(s) 329, 1209, 1494, 1825
SatI GCNGC 5 cut(s) 339, 666, 772, 1488, 1499
Sau3AI GATC 6 cut(s) 4, 778, 1189, 1213, 1474, 1578
Sau96I GGNCC 2 cut(s) 524, 549
ScaI AGTACT 1 cut(s) 1549
SchI GAGTC 2 cut(s) 1227, 1793
ScrFI CCNGG 2 cut(s) 813, 1366
SduI GDGCHC 2 cut(s) 1074, 1395
SfaNI GCATC 2 cut(s) 325, 971
SfcI CTRYAG 3 cut(s) 99, 246, 769
Sfr274I CTCGAG 1 cut(s) 1193
SlaI CTCGAG 1 cut(s) 1193
SmiMI CAYNNNNRTG 1 cut(s) 1770
SmlI CTYRAG 3 cut(s) 1086, 1193, 1394
SmoI CTYRAG 3 cut(s) 1086, 1193, 1394
Sse9I AATT 7 cut(s) 747, 869, 952, 1235, 1428, 1529, 1804
SsiI CCGC 3 cut(s) 147, 426, 1408
SspMI CTAG 3 cut(s) 1535, 1545, 1727
SstI GAGCTC 1 cut(s) 1395
StyD4I CCNGG 2 cut(s) 811, 1364
StyI CCWWGG 4 cut(s) 624, 1113, 1159, 1650
TaaI ACNGT 3 cut(s) 613, 698, 1794
TaiI ACGT 1 cut(s) 1022
TaqI TCGA 4 cut(s) 489, 1194, 1216, 1581
TasI AATT 7 cut(s) 747, 869, 952, 1235, 1428, 1529, 1804
TatI WGTACW 4 cut(s) 1014, 1313, 1547, 1632
TfiI GAWTC 4 cut(s) 620, 739, 1025, 1564
Tru1I TTAA 4 cut(s) 329, 1209, 1494, 1825
Tru9I TTAA 4 cut(s) 329, 1209, 1494, 1825
TscAI CASTG 3 cut(s) 544, 1510, 1720
TseFI GTSAC 1 cut(s) 266
TseI GCWGC 5 cut(s) 338, 665, 771, 1487, 1498
Tsp45I GTSAC 1 cut(s) 266
TspDTI ATGAA 7 cut(s) 45, 146, 699, 731, 1347, 1586, 1811
TspRI CASTG 3 cut(s) 544, 1510, 1720
XapI RAATTY 3 cut(s) 747, 1235, 1529
XcmI CCANNNNNNNNNTGG 1 cut(s) 696
XhoI CTCGAG 1 cut(s) 1193
XmiI GTMKAC 2 cut(s) 543, 587
XmnI GAANNNNTTC 2 cut(s) 117, 1338
XspI CTAG 3 cut(s) 1535, 1545, 1727
ZrmI AGTACT 1 cut(s) 1549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.