RLG00000010630

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000166
Physical Location & Seq
Reverse (-)
3115678 .. 3118077
2400 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010630

Sequence Viewer

Length: 2400 bp
ATGGCTTCTCTGTTTCGCATTTTTCTTCTTTTTCTTGCAATTTATTCCCAAATCTCGTCTTCAACCTCCGATGCTCTGAATAAAGGCTCATCCCTATCTGTAGAGAAACCAGACGATGTTTTAACTTCACCGGATGGAGTTTTCACCGCCGGGTTTCACCAAGTCGGCAACAATTCATTTTGCCTTGCCATTTGGTTCAGTGAGCCATTTGACCACTACAAAGACAAAACCATAGTCTGGATGGCCAACCGTGACCAACCAGTCAATGGCAAACACTCAAAGCTCTCCCTCCTCAAAACTGGTGATCTCATCTTAACCGACGCTAGTCAATCCAACGTTTGGTCCACAGCGACGACTTCAGTCTCACCGGCGAACTTAAGCCTCCACAATTCAGGCAATCTTGTTTTGCTCAACTCGGAGCATGTCATTCTATGGCAGAGCTTTGATTACCCTACTGATACTCTTCTTTCGAGCCAACCACTCACCAGAAGCACAATCCTTGTCTCCATGAGAAGCCCGAGCAACTACTCCTCTGGCTTCTACAAGCTCTTCTTTGACAATGACAACCTTCTCCGGCTACTCTTCGACGGTCTTGAGGTTTCAAGTGTGTATTGGTTTGAGCCGTGGCTCACAGGACGAGGCGCCTTAAGGTCCACAGATAACAGCAGCAGAGTAGCCGTGATGGATTCCCTAGGCAAGTTTACTTCATCGGACAACTATACTTTGATCGCTTCCGATTATGGTGCAGCTTCGCAGAGAAGACTGACGGTTGATTGTGATGGAAATGTTCGGTTGCACAGCCGGGCCAAACCCGGAGACAGATGGGTTGTGACAGGGCAGATCATTCAAGATCCTTGTAAGATTCATGGGGTTTGTGGTCCTAATAGTGTGTGTAGCTATGAGCCTAGTACTGGAAGAAAATGTTCTTGCATTCCTGGTTTCAAAATGGCAAACCATACTGATTGGTATTATGGTTGTGAACCAGAGTTCAATTACACTTGCAGCAGAGGTGAATCTAGTTTCTTCAAACTTCCCAGGCTCGAGTTTTTCGGGTACGATTACGGATACTTCACCAACTACACATTCATGCAGTGTAGGGATCTCTGTTTGCAGCTGTGTGACTGCAAGGGTTTCCAATACTCTCGAATCCCCGGCAACAGTATATATAGCTGTTATCCGAAAACGGTGTTGCTCAATGGATACAGGTCTCCTAGCTTTTTTGGAGACATATATTTGAGAGTGCCAAAGATCCATCTGTCATCTTATGGATTGCCACAAGAAGAGTATCGGTTGAGTTGCTTAGATAAGGTGGTTGAGCTAGATAGGAGCTATGAGAAGATCCATGTAACTGGTCTAGTGAAATTTTTGCTGTGGTTTGCCTGTGGAGTTGGAGGGTTTGAGATCATTTGTATACTTTTGGTTTTGGGTTTTATAACTCGAAACCAGAGAGATTCCAATGAGGATAAGTACGGTTACCATCTTGCTGCAACTGGATTCAAGAGGTTTAGCTACGCTGAGCTTAAGAAGGCGACGCAGGGTTTTAGTGAAGAAATTGGAAGAGGAGCAGGAGGTGTTGTTTACAAAGCTGTGTTGGCTGATCATCGAGTTGCAGCGATCAAGAGGCTTAATGAAACCAACCAAGGAGAAGGTGAGTTTTCAGCAGAAGTCAACACTATTGGGAGGCTTAACCATATGCGTTTGATTGAGATGTGGGGATATTGCTCGGAGGGAAAGCACAGGCTTCTTGTCTATGAGTACATGGAGCATGGTTCCTTGGCACAAAAGTTAGCTTCCAATGTCCTTGATTGGGAAAAGAGGTTTGAGATTGCTCTAGGCACTGCAAAGGGTCTTGCTTATTTGCATGAAGAATGTTTGGAGTGGGTTTTACATTGTGATGTTAAGCCTCAAAACGTACTGTTGGACTCCAATTATCAACCAAAGGTTGCAGATTTTGGCCTATCCAAGCTCCTCAACAGAGATGACCGTAAGAACTGGAGCTTTTCAAGGATTCAAGGAACTAGAGGTTACATTGCTCCGGAGTGGGTTTACAATTTGCCTATCACATCCAAAGTGGATGTGTACAGCTATGGGGTTGTGGTGTTGGAGATGGTGACCGGAAAGAACCCGATAAAGCCGCATGTGGATGCCATTGATGGCGAGCAGAGAAGGCTGATCATGTGGGTGAGGGAGAAATTACATGATGGAACTTCTGCTGGTGAAATTGAAGCTCGGATAGGAGACGTCATAGACCCTTCGTTTGAAGGTAACTATGATGTAAAAAAGATGAGGATTCTGTTGGAAGTTGCTTTACATTGTGTAGAGGAAGACAGAGACGCGAGACCAACTATGAGCCAAGTCGTTGAGATGCTTGTGCTGCTTGACAAAGACCATGAGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

800

Amino Acids

90.34

Weight (kDa)

6.21

Isoelectric Point (pI)

35.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 77 - 163 3.9e-23 D-mannose binding lectin
S_locus_glycop PF00954 248 - 316 1.8e-08 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 514 - 790 1.8e-38 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 515 - 789 9.3e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1433
AasI GACNNNNNNGTC 1 cut(s) 260
AatII GACGTC 1 cut(s) 2244
AccB1I GGYRCC 1 cut(s) 641
AccB7I CCANNNNNTGG 3 cut(s) 237, 266, 339
AccI GTMKAC 1 cut(s) 1411
AccII CGCG 1 cut(s) 2336
AccIII TCCGGA 1 cut(s) 2035
AciI CCGC 2 cut(s) 147, 2135
AclI AACGTT 1 cut(s) 336
AclWI GGATC 4 cut(s) 845, 1107, 1243, 1333
AcoI YGGCCR 1 cut(s) 243
AcsI RAATTY 1 cut(s) 1361
AcuI CTGAAG 1 cut(s) 342
AcyI GRCGYC 2 cut(s) 642, 2241
AfaI GTAC 6 cut(s) 910, 1055, 1469, 1757, 1914, 2081
AfiI CCNNNNNNNGG 5 cut(s) 237, 266, 339, 911, 1807
AflII CTTAAG 3 cut(s) 376, 646, 1520
AjnI CCWGG 2 cut(s) 934, 1034
AjuI GAANNNNNNNTTGG 2 cut(s) 1067, 1099
Alw26I GTCTC 8 cut(s) 367, 508, 810, 1212, 1218, 2232, 2325, 2332
AlwI GGATC 4 cut(s) 845, 1107, 1243, 1333
Ama87I CYCGRG 2 cut(s) 517, 1040
Aor13HI TCCGGA 1 cut(s) 2035
AoxI GGCC 3 cut(s) 243, 804, 1954
ApeKI GCWGC 7 cut(s) 666, 746, 1002, 1111, 1484, 1610, 2374
ApoI RAATTY 1 cut(s) 1361
ArsI GACNNNNNNTTYG 4 cut(s) 219, 251, 2240, 2272
Asp700I GAANNNNTTC 1 cut(s) 922
AspA2I CCTAGG 1 cut(s) 691
AspLEI GCGC 1 cut(s) 644
AspS9I GGNCC 4 cut(s) 342, 651, 804, 878
AsuC2I CCSGG 4 cut(s) 151, 803, 813, 1152
AvaI CYCGRG 2 cut(s) 517, 1040
AvaII GGWCC 3 cut(s) 342, 651, 878
AvrII CCTAGG 1 cut(s) 691
BalI TGGCCA 1 cut(s) 245
BanI GGYRCC 1 cut(s) 641
BarI GAAGNNNNNNTAC 2 cut(s) 2292, 2324
BbsI GAAGAC 3 cut(s) 51, 766, 2331
BbvI GCAGC 7 cut(s) 678, 758, 1014, 1123, 1471, 1622, 2361
BceAI ACGGC 2 cut(s) 607, 662
BcgI CGANNNNNNTGC 2 cut(s) 725, 759
BciT130I CCWGG 2 cut(s) 936, 1036
BciVI GTATCC 2 cut(s) 1058, 1193
BclI TGATCA 2 cut(s) 1597, 2172
BcnI CCSGG 4 cut(s) 151, 803, 813, 1152
BcoDI GTCTC 8 cut(s) 367, 508, 810, 1212, 1218, 2232, 2325, 2332
BfaI CTAG 9 cut(s) 324, 692, 906, 1017, 1212, 1319, 1355, 1832, 2019
BfmI CTRYAG 1 cut(s) 99
BfoI RGCGCY 1 cut(s) 645
BfrI CTTAAG 3 cut(s) 376, 646, 1520
BfuI GTATCC 2 cut(s) 1058, 1193
BisI GCNGC 8 cut(s) 667, 747, 1003, 1112, 1485, 1611, 2135, 2375
BlnI CCTAGG 1 cut(s) 691
BlpI GCTNAGC 1 cut(s) 1515
BlsI GCNGC 8 cut(s) 668, 748, 1004, 1113, 1486, 1612, 2136, 2376
BmcAI AGTACT 1 cut(s) 910
Bme1390I CCNGG 6 cut(s) 151, 803, 813, 936, 1036, 1152
Bme18I GGWCC 3 cut(s) 342, 651, 878
BmeT110I CYCGRG 2 cut(s) 517, 1040
BmgT120I GGNCC 4 cut(s) 342, 651, 804, 878
BmiI GGNNCC 2 cut(s) 643, 1771
BmrFI CCNGG 6 cut(s) 151, 803, 813, 936, 1036, 1152
BmsI GCATC 3 cut(s) 61, 2134, 2355
BoxI GACNNNNGTC 2 cut(s) 324, 359
BpiI GAAGAC 3 cut(s) 51, 766, 2331
BpmI CTGGAG 1 cut(s) 2014
Bpu1102I GCTNAGC 1 cut(s) 1515
BpuEI CTTGAG 1 cut(s) 614
BpuMI CCSGG 4 cut(s) 151, 803, 813, 1152
BsaHI GRCGYC 2 cut(s) 642, 2241
BsaI GGTCTC 2 cut(s) 1212, 2332
BsaJI CCNNGG 6 cut(s) 623, 691, 1034, 1150, 1639, 1773
BsaWI WCCGGW 3 cut(s) 130, 2035, 2114
BsaXI ACNNNNNCTCC 2 cut(s) 1560, 1590
Bsc4I CCNNNNNNNGG 5 cut(s) 237, 266, 339, 911, 1807
Bse118I RCCGGY 1 cut(s) 367
Bse1I ACTGG 6 cut(s) 260, 304, 916, 1354, 1495, 1997
Bse3DI GCAATG 1 cut(s) 2028
BseAI TCCGGA 1 cut(s) 2035
BseBI CCWGG 2 cut(s) 936, 1036
BseDI CCNNGG 6 cut(s) 623, 691, 1034, 1150, 1639, 1773
BseGI GGATG 6 cut(s) 89, 139, 246, 2063, 2080, 2149
BseLI CCNNNNNNNGG 5 cut(s) 237, 266, 339, 911, 1807
BseMI GCAATG 1 cut(s) 2028
BseMII CTCAG 1 cut(s) 1506
BseNI ACTGG 6 cut(s) 260, 304, 916, 1354, 1495, 1997
BseRI GAGGAG 4 cut(s) 281, 520, 1575, 1958
BseXI GCAGC 7 cut(s) 678, 758, 1014, 1123, 1471, 1622, 2361
BsgI GTGCAG 1 cut(s) 765
Bsh1236I CGCG 1 cut(s) 2336
BshFI GGCC 3 cut(s) 245, 806, 1956
BshNI GGYRCC 1 cut(s) 641
BsiHKCI CYCGRG 2 cut(s) 517, 1040
BsiSI CCGG 9 cut(s) 131, 150, 368, 574, 802, 813, 1152, 2036, 2115
BslI CCNNNNNNNGG 5 cut(s) 237, 266, 339, 911, 1807
BsmAI GTCTC 8 cut(s) 367, 508, 810, 1212, 1218, 2232, 2325, 2332
BsmBI CGTCTC 2 cut(s) 2232, 2325
BsmI GAATGC 1 cut(s) 930
BsnI GGCC 3 cut(s) 245, 806, 1956
Bso31I GGTCTC 2 cut(s) 1212, 2332
BsoBI CYCGRG 2 cut(s) 517, 1040
Bsp13I TCCGGA 1 cut(s) 2035
Bsp1407I TGTACA 1 cut(s) 2079
Bsp1720I GCTNAGC 1 cut(s) 1515
BspACI CCGC 2 cut(s) 147, 2135
BspANI GGCC 3 cut(s) 245, 806, 1956
BspCNI CTCAG 1 cut(s) 1507
BspEI TCCGGA 1 cut(s) 2035
BspFNI CGCG 1 cut(s) 2336
BspLI GGNNCC 2 cut(s) 643, 1771
BspPI GGATC 4 cut(s) 845, 1107, 1243, 1333
BspQI GCTCTTC 1 cut(s) 554
BspT107I GGYRCC 1 cut(s) 641
BspTI CTTAAG 3 cut(s) 376, 646, 1520
BspTNI GGTCTC 2 cut(s) 1212, 2332
BsrDI GCAATG 1 cut(s) 2028
BsrFI RCCGGY 1 cut(s) 367
BsrGI TGTACA 1 cut(s) 2079
BsrI ACTGG 6 cut(s) 260, 304, 916, 1354, 1495, 1997
BssAI RCCGGY 1 cut(s) 367
BssECI CCNNGG 6 cut(s) 623, 691, 1034, 1150, 1639, 1773
BssNAI GTATAC 1 cut(s) 1412
BssNI GRCGYC 2 cut(s) 642, 2241
BssT1I CCWWGG 3 cut(s) 691, 1639, 1773
Bst1107I GTATAC 1 cut(s) 1412
Bst2UI CCWGG 2 cut(s) 936, 1036
Bst4CI ACNGT 8 cut(s) 251, 590, 769, 1160, 1186, 1472, 1917, 1985
Bst6I CTCTTC 5 cut(s) 468, 554, 587, 1275, 1552
BstACI GRCGYC 2 cut(s) 642, 2241
BstAFI CTTAAG 3 cut(s) 376, 646, 1520
BstAUI TGTACA 1 cut(s) 2079
BstC8I GCNNGC 1 cut(s) 2159
BstDEI CTNAG 2 cut(s) 1300, 1515
BstDSI CCRYGG 1 cut(s) 623
BstEII GGTNACC 2 cut(s) 1472, 2110
BstF5I GGATG 6 cut(s) 89, 139, 246, 2063, 2080, 2149
BstFNI CGCG 1 cut(s) 2336
BstH2I RGCGCY 1 cut(s) 645
BstHHI GCGC 1 cut(s) 644
BstMAI GTCTC 8 cut(s) 367, 508, 810, 1212, 1218, 2232, 2325, 2332
BstMWI GCNNNNNNNGC 3 cut(s) 1592, 2167, 2374
BstNI CCWGG 2 cut(s) 936, 1036
BstNSI RCATGY 2 cut(s) 425, 2141
BstPAI GACNNNNGTC 2 cut(s) 324, 359
BstPI GGTNACC 2 cut(s) 1472, 2110
BstSCI CCNGG 6 cut(s) 149, 801, 811, 934, 1034, 1150
BstSFI CTRYAG 1 cut(s) 99
BstUI CGCG 1 cut(s) 2336
BstV1I GCAGC 7 cut(s) 678, 758, 1014, 1123, 1471, 1622, 2361
BstV2I GAAGAC 3 cut(s) 51, 766, 2331
BstX2I RGATCY 4 cut(s) 850, 1099, 1248, 1338
BstXI CCANNNNNNTGG 1 cut(s) 1349
BstYI RGATCY 4 cut(s) 850, 1099, 1248, 1338
BstZ17I GTATAC 1 cut(s) 1412
BsuI GTATCC 2 cut(s) 1058, 1193
BsuRI GGCC 3 cut(s) 245, 806, 1956
BtgI CCRYGG 1 cut(s) 623
BtsCI GGATG 6 cut(s) 89, 139, 246, 2063, 2080, 2149
BtsI GCAGTG 2 cut(s) 1097, 1836
BtsIMutI CAGTG 3 cut(s) 205, 1097, 1836
Cac8I GCNNGC 1 cut(s) 2159
CfoI GCGC 1 cut(s) 644
Cfr10I RCCGGY 1 cut(s) 367
Cfr13I GGNCC 4 cut(s) 342, 651, 804, 878
CseI GACGC 3 cut(s) 329, 1540, 2342
Csp6I GTAC 6 cut(s) 909, 1054, 1468, 1756, 1913, 2080
CviQI GTAC 6 cut(s) 909, 1054, 1468, 1756, 1913, 2080
DdeI CTNAG 2 cut(s) 1300, 1515
DinI GGCGCC 1 cut(s) 643
DrdI GACNNNNNNGTC 1 cut(s) 260
DseDI GACNNNNNNGTC 1 cut(s) 260
EaeI YGGCCR 1 cut(s) 243
Eam1104I CTCTTC 5 cut(s) 468, 554, 587, 1275, 1552
EarI CTCTTC 5 cut(s) 468, 554, 587, 1275, 1552
Eco130I CCWWGG 3 cut(s) 691, 1639, 1773
Eco31I GGTCTC 2 cut(s) 1212, 2332
Eco47I GGWCC 3 cut(s) 342, 651, 878
Eco57I CTGAAG 1 cut(s) 342
Eco88I CYCGRG 2 cut(s) 517, 1040
Eco91I GGTNACC 2 cut(s) 1472, 2110
EcoO65I GGTNACC 2 cut(s) 1472, 2110
EcoRII CCWGG 2 cut(s) 934, 1034
EcoT14I CCWWGG 3 cut(s) 691, 1639, 1773
EgeI GGCGCC 1 cut(s) 643
EheI GGCGCC 1 cut(s) 643
ErhI CCWWGG 3 cut(s) 691, 1639, 1773
Esp3I CGTCTC 2 cut(s) 2232, 2325
FalI AAGNNNNNCTT 2 cut(s) 536, 568
FauNDI CATATG 1 cut(s) 1692
FbaI TGATCA 2 cut(s) 1597, 2172
FblI GTMKAC 1 cut(s) 1411
Fnu4HI GCNGC 8 cut(s) 667, 747, 1003, 1112, 1485, 1611, 2135, 2375
FokI GGATG 6 cut(s) 76, 146, 253, 2050, 2087, 2156
Fsp4HI GCNGC 8 cut(s) 667, 747, 1003, 1112, 1485, 1611, 2135, 2375
FspBI CTAG 9 cut(s) 324, 692, 906, 1017, 1212, 1319, 1355, 1832, 2019
GlaI GCGC 1 cut(s) 643
GluI GCNGC 8 cut(s) 667, 747, 1003, 1112, 1485, 1611, 2135, 2375
GsuI CTGGAG 1 cut(s) 2014
HaeII RGCGCY 1 cut(s) 645
HaeIII GGCC 3 cut(s) 245, 806, 1956
HapII CCGG 9 cut(s) 131, 150, 368, 574, 802, 813, 1152, 2036, 2115
HgaI GACGC 3 cut(s) 329, 1540, 2342
HhaI GCGC 1 cut(s) 644
Hin1I GRCGYC 2 cut(s) 642, 2241
Hin6I GCGC 1 cut(s) 642
HinP1I GCGC 1 cut(s) 642
HincII GTYRAC 1 cut(s) 1669
HindII GTYRAC 1 cut(s) 1669
HinfI GANTC 9 cut(s) 686, 862, 1013, 1146, 1451, 1494, 1922, 2008, 2290
HpaII CCGG 9 cut(s) 131, 150, 368, 574, 802, 813, 1152, 2036, 2115
Hpy166II GTNNAC 9 cut(s) 345, 654, 702, 980, 1412, 1579, 1669, 2047, 2080
Hpy188I TCNGA 8 cut(s) 70, 78, 418, 712, 736, 1179, 1726, 2232
Hpy188III TCNNGA 7 cut(s) 238, 593, 848, 1143, 1498, 1618, 2036
Hpy8I GTNNAC 9 cut(s) 345, 654, 702, 980, 1412, 1579, 1669, 2047, 2080
Hpy99I CGWCG 4 cut(s) 323, 355, 590, 1534
HpyAV CCTTC 6 cut(s) 578, 1519, 1640, 2160, 2255, 2262
HpyCH4III ACNGT 8 cut(s) 251, 590, 769, 1160, 1186, 1472, 1917, 1985
HpyCH4IV ACGT 3 cut(s) 336, 1911, 2241
HpyF10VI GCNNNNNNNGC 3 cut(s) 1592, 2167, 2374
HpyF3I CTNAG 2 cut(s) 1300, 1515
HpySE526I ACGT 3 cut(s) 336, 1911, 2241
Hsp92I GRCGYC 2 cut(s) 642, 2241
HspAI GCGC 1 cut(s) 642
KasI GGCGCC 1 cut(s) 641
Kpn2I TCCGGA 1 cut(s) 2035
Ksp22I TGATCA 2 cut(s) 1597, 2172
LguI GCTCTTC 1 cut(s) 554
LmnI GCTCC 7 cut(s) 418, 1326, 1562, 1762, 1971, 1995, 2038
Lsp1109I GCAGC 7 cut(s) 678, 758, 1014, 1123, 1471, 1622, 2361
LweI GCATC 3 cut(s) 61, 2134, 2355
MaeI CTAG 9 cut(s) 324, 692, 906, 1017, 1212, 1319, 1355, 1832, 2019
MaeII ACGT 3 cut(s) 336, 1911, 2241
MaeIII GTNAC 8 cut(s) 251, 829, 1118, 1345, 1472, 2024, 2110, 2264
MflI RGATCY 4 cut(s) 850, 1099, 1248, 1338
MlsI TGGCCA 1 cut(s) 245
MluNI TGGCCA 1 cut(s) 245
Mly113I GGCGCC 1 cut(s) 642
MlyI GAGTC 1 cut(s) 1916
MmeI TCCRAC 5 cut(s) 357, 1369, 1899, 2082, 2277
Mox20I TGGCCA 1 cut(s) 245
MroI TCCGGA 1 cut(s) 2035
MroXI GAANNNNTTC 1 cut(s) 922
MscI TGGCCA 1 cut(s) 245
MseI TTAA 8 cut(s) 122, 314, 377, 647, 1521, 1626, 1686, 1899
MslI CAYNNNNRTG 4 cut(s) 1085, 1893, 2142, 2180
Msp20I TGGCCA 1 cut(s) 245
MspA1I CMGCKG 1 cut(s) 1114
MspCI CTTAAG 3 cut(s) 376, 646, 1520
MspI CCGG 9 cut(s) 131, 150, 368, 574, 802, 813, 1152, 2036, 2115
MspR9I CCNGG 6 cut(s) 151, 803, 813, 936, 1036, 1152
Mva1269I GAATGC 1 cut(s) 930
MvaI CCWGG 2 cut(s) 936, 1036
MvnI CGCG 1 cut(s) 2336
MwoI GCNNNNNNNGC 3 cut(s) 1592, 2167, 2374
NarI GGCGCC 1 cut(s) 642
NciI CCSGG 4 cut(s) 151, 803, 813, 1152
NdeI CATATG 1 cut(s) 1692
NlaIV GGNNCC 2 cut(s) 643, 1771
NmuCI GTSAC 4 cut(s) 251, 829, 1118, 2110
NspI RCATGY 2 cut(s) 425, 2141
PaeR7I CTCGAG 1 cut(s) 1040
PciSI GCTCTTC 1 cut(s) 554
PctI GAATGC 1 cut(s) 930
PdmI GAANNNNTTC 1 cut(s) 922
PfeI GAWTC 8 cut(s) 686, 862, 1013, 1146, 1451, 1494, 2008, 2290
PflMI CCANNNNNTGG 3 cut(s) 237, 266, 339
PkrI GCNGC 8 cut(s) 668, 748, 1004, 1113, 1486, 1612, 2136, 2376
PleI GAGTC 1 cut(s) 1916
PluTI GGCGCC 1 cut(s) 645
PpsI GAGTC 1 cut(s) 1916
PshAI GACNNNNGTC 2 cut(s) 324, 359
PsiI TTATAA 1 cut(s) 1433
Psp1406I AACGTT 1 cut(s) 336
Psp6I CCWGG 2 cut(s) 934, 1034
PspEI GGTNACC 2 cut(s) 1472, 2110
PspGI CCWGG 2 cut(s) 934, 1034
PspN4I GGNNCC 2 cut(s) 643, 1771
PspPI GGNCC 4 cut(s) 342, 651, 804, 878
PspXI VCTCGAGB 1 cut(s) 1040
PsuI RGATCY 4 cut(s) 850, 1099, 1248, 1338
PvuII CAGCTG 1 cut(s) 1114
RsaI GTAC 6 cut(s) 910, 1055, 1469, 1757, 1914, 2081
RsaNI GTAC 6 cut(s) 909, 1054, 1468, 1756, 1913, 2080
RseI CAYNNNNRTG 4 cut(s) 1085, 1893, 2142, 2180
SapI GCTCTTC 1 cut(s) 554
SaqAI TTAA 8 cut(s) 122, 314, 377, 647, 1521, 1626, 1686, 1899
SatI GCNGC 8 cut(s) 667, 747, 1003, 1112, 1485, 1611, 2135, 2375
Sau96I GGNCC 4 cut(s) 342, 651, 804, 878
ScaI AGTACT 1 cut(s) 910
SchI GAGTC 1 cut(s) 1916
ScrFI CCNGG 6 cut(s) 151, 803, 813, 936, 1036, 1152
SfaNI GCATC 3 cut(s) 61, 2134, 2355
SfcI CTRYAG 1 cut(s) 99
SfoI GGCGCC 1 cut(s) 643
Sfr274I CTCGAG 1 cut(s) 1040
SgrAI CRCCGGYG 1 cut(s) 367
SinI GGWCC 3 cut(s) 342, 651, 878
SlaI CTCGAG 1 cut(s) 1040
SmiMI CAYNNNNRTG 4 cut(s) 1085, 1893, 2142, 2180
SmlI CTYRAG 5 cut(s) 376, 593, 646, 1040, 1520
SmoI CTYRAG 5 cut(s) 376, 593, 646, 1040, 1520
SsiI CCGC 2 cut(s) 147, 2135
SspDI GGCGCC 1 cut(s) 641
SspMI CTAG 9 cut(s) 324, 692, 906, 1017, 1212, 1319, 1355, 1832, 2019
StyD4I CCNGG 6 cut(s) 149, 801, 811, 934, 1034, 1150
StyI CCWWGG 3 cut(s) 691, 1639, 1773
TaaI ACNGT 8 cut(s) 251, 590, 769, 1160, 1186, 1472, 1917, 1985
TaiI ACGT 3 cut(s) 339, 1914, 2244
TaqI TCGA 6 cut(s) 470, 585, 1041, 1144, 1438, 1603
TatI WGTACW 3 cut(s) 908, 1755, 2079
TauI GCSGC 1 cut(s) 2137
TfiI GAWTC 8 cut(s) 686, 862, 1013, 1146, 1451, 1494, 2008, 2290
Tru1I TTAA 8 cut(s) 122, 314, 377, 647, 1521, 1626, 1686, 1899
Tru9I TTAA 8 cut(s) 122, 314, 377, 647, 1521, 1626, 1686, 1899
TscAI CASTG 3 cut(s) 205, 1097, 1843
TseFI GTSAC 4 cut(s) 251, 829, 1118, 2110
TseI GCWGC 7 cut(s) 666, 746, 1002, 1111, 1484, 1610, 2374
Tsp45I GTSAC 4 cut(s) 251, 829, 1118, 2110
TspDTI ATGAA 6 cut(s) 165, 696, 854, 1075, 1644, 1878
TspGWI ACGGA 1 cut(s) 1077
TspRI CASTG 3 cut(s) 205, 1097, 1843
Van91I CCANNNNNTGG 3 cut(s) 237, 266, 339
Vha464I CTTAAG 3 cut(s) 376, 646, 1520
VpaK11BI GGWCC 3 cut(s) 342, 651, 878
XapI RAATTY 1 cut(s) 1361
XceI RCATGY 2 cut(s) 425, 2141
XcmI CCANNNNNNNNNTGG 2 cut(s) 238, 263
XhoI CTCGAG 1 cut(s) 1040
XmaJI CCTAGG 1 cut(s) 691
XmiI GTMKAC 1 cut(s) 1411
XmnI GAANNNNTTC 1 cut(s) 922
XspI CTAG 9 cut(s) 324, 692, 906, 1017, 1212, 1319, 1355, 1832, 2019
ZraI GACGTC 1 cut(s) 2242
ZrmI AGTACT 1 cut(s) 910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.