Rh3DG137000

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000166
Physical Location & Seq
Forward (+)
11680838 .. 11683240
2403 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG137000.1

Sequence Viewer

Length: 2403 bp
ATGGCACACCAAACTGTTGTTTCATCTTCAAAATTGACCTTTTTTTTTATGTTCGTATTTTCCCTCTGTTTTGCAACCGCAAATACCCTGAACAGAGGCTCTTCGCTTTCGGTGAAAAATGCTCATTCAGACTTGCTAACTTCCCCAGACAAATCATTTACGTGTGGATTCTATGGGGTACCGGGTAGAAATGCCTATTGGTTCTCCATATGGTTCACAAATTCCAAAGATCAAACCGTTGTTTGGATGGCTAACAGAGACAGACCCGTTGGCCTGGAATCCAGAGTTTCGTTGCGTCGAGATGGCTCCATGGTCTTGACTAATCATGTGGATGTCACTACCATAATCTGGGAGACCGGCACCGGCTCCACTGGTGTTGACAGAGCGCAGCTTCTGAATTCTGGCAACCTTGTTCTGAAAGACCCAAATGGTACAATTCTGTGGCGAAGCTTTGATTTTCCCACTGATACTCTCCTCCCAAACCAACCATTTACAAAAAGCAGCACTCTGGTATCAAATTTAGGAAGAGGAAATTTTGGTGCTGGATATTTCAATTTCTATTTTGATAATGATAATGTTTTGAAGTTGATGTATAATGGTCCTGACATTTCAAGCTTGTATTGGCCCGACCTTGATTATAGTGTGTTTCAGAATGGTAGAAATGCTTACAATAGTAGTAGAATTGCTGTTTTAGATGAACTTGGTAGTTTTTCATCTAGTGATGAACTGCAGTTCAGTGCTATCGACATGGGTTCGAGAGTGAAAAGGCGGTTGACACTGGATTATGATGGAAATCTAAGACTTTATAGTCTTAATAGCTCAACGGGATTGTGGGTGATCACATGGCAAGCTATGGCGGCGCCTTGTAAGGTTCATGGAATTTGTGGGAGAAATGGGATTTGCGTTTATACTCCAGCACCCAGGTGTTCATGTCCTCCTGGCTATGAAGTAGCCGATGCAAGTAACTTGAACTTGGGCTGCAAGCCTAAGTTCAAGCGTACATGCTCGAAGTCCCAAGAAGAGAAATTTGTGCAGATTCCGCAAGTAAATTTCTATGGATTTGATCTCAATTTTAGTGTAGCAATTTCAATTGATGATTGCAGACAGCTCTGCTTGGGGGATTGCCGGTGTGAGGCATTTAGCTATAGGCTAAATGGGGAAGGTTGGTGTTACACCAAAAGTGCTCTTTTCAATGGCTACAAGTCACCAGATTTTGTGGGCAGTATATACTTGAGAATGCCTGTGAGTTTAAGTGTGCATACATCAAAACCCCAATATTCCAATGCCTCTATTCCATGCAAGACCAATGGTCCTGCAATGTATGGCACTACCGGTAAAAGGGTGAGATGGGTATATCTGTATAGTTTTGCTTTTGCAGTTGGTGCTGTTGAGTTTCTTTTTATAGTATCAGGTTGGTGGCTACTTTTCAGAAGACATGGTAGTGCTGTAACTCCTGTGGAAGACGGATATCGTGTGATTTCAAGTCAATTTAGAAGGTTTCGCTTCAATGAGCTCAAGAGTGCAACCAAAAACTTCCAGGAAGAGCTGGGAAGAGGGGCTTCAGGGTCTGTCTATAAGGGTGTTCTGGAGGATGAAAGAGTAGTGGCTGTCAAGAAATTGGCAGATATTCATCAAGGGGAAGATGTGTTTTGGGCAGAAGTAAGCACAATTGGCAAAATCAATCACATGAATCTAGTGAGAATTTGGGGATTTTGCTCAGAAGATGAGCACAGACTACTGGTTTCTGAGTTTGTTGAAAATGGGTCTTTGGACAAGCACTTGTTCACCTCAAATTTACTTGGATGGAAAGAGAGGTATAAAGTTGCACTAGGGATAGCAAAGGGCTTAGCCTATCTTCACCATGAATGTCTGGAATGGGTTATACATTGTGACGTGAAGCCTGAAAATATACTCCTAGACAGTGATTTTGAGCCAAAGATTGCAGATTTTGGGCTAGCAAAGCTAACTCAGAGAGATAGGCTCATTTCAATGTTCTCTCAGATTCGAGGAACAAAAGGTTATATGGCCCCGGAGTGGGCTATGAACCTTCGAATTACTGCAAAGGTTGATGTTTACAGTTATGGGGTGTTGATCCTGGAGATAGTGAAGGGCATTCGACTTACAAGTTGGTTGCTGGAGGATATTGAAGAGGAGCAAGAAGCAGAGCTTACCAAGTTTGTGAGGGAAGCCAAAAGGAAAATTCAACGAGGGGAAGAGTTGTTGATAGAGGATGTTGCTGATCCAAGACTAGAAGGGCAGTTCAGCAGGAACCAAGCAGCAAAGATGGTTAAAATTGGCATTGCCTGTGTGGAGGAAGATAGGAGCAAAAGACCAACAATGGATTCAGTGGTAAAAAGTTTGCTAGAATGTGAAGATGAATCTTACATTCATTCTTCACATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

800

Amino Acids

90.31

Weight (kDa)

7.47

Isoelectric Point (pI)

30.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 79 - 166 4.3e-20 D-mannose binding lectin
S_locus_glycop PF00954 239 - 316 2.1e-10 S-locus glycoprotein domain
PAN_2 PF08276 335 - 391 5.3e-06 PAN-like domain
PK_Tyr_Ser-Thr PF07714 512 - 786 8.9e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 513 - 785 1.7e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 807
Acc65I GGTACC 1 cut(s) 178
AccB1I GGYRCC 3 cut(s) 178, 359, 859
AccB7I CCANNNNNTGG 1 cut(s) 348
AciI CCGC 4 cut(s) 78, 769, 857, 1040
AclWI GGATC 2 cut(s) 2086, 2234
AcuI CTGAAG 1 cut(s) 1545
AcyI GRCGYC 1 cut(s) 860
AfaI GTAC 3 cut(s) 180, 433, 1000
AfiI CCNNNNNNNGG 6 cut(s) 243, 348, 1132, 1338, 2034, 2035
AflIII ACRYGT 1 cut(s) 161
AgeI ACCGGT 1 cut(s) 1331
AhdI GACNNNNNGTC 1 cut(s) 1308
AjiI CACGTC 1 cut(s) 1894
AjnI CCWGG 5 cut(s) 273, 920, 937, 1536, 2094
AjuI GAANNNNNNNTTGG 4 cut(s) 181, 213, 2326, 2358
AleI CACNNNNGTG 1 cut(s) 922
Alw21I GWGCWC 3 cut(s) 1186, 1515, 1731
Alw26I GTCTC 2 cut(s) 252, 347
AlwI GGATC 2 cut(s) 2086, 2234
AlwNI CAGNNNCTG 2 cut(s) 394, 1568
AoxI GGCC 3 cut(s) 271, 623, 2025
ApeKI GCWGC 4 cut(s) 388, 501, 978, 2276
ArsI GACNNNNNNTTYG 2 cut(s) 1910, 1942
AsiGI ACCGGT 1 cut(s) 1331
Asp718I GGTACC 1 cut(s) 178
AspLEI GCGC 2 cut(s) 388, 862
AspS9I GGNCC 4 cut(s) 599, 624, 1310, 2026
AsuC2I CCSGG 2 cut(s) 183, 2030
AsuHPI GGTGA 6 cut(s) 124, 847, 1197, 1354, 1777, 1850
AsuII TTCGAA 1 cut(s) 2050
AsuNHI GCTAGC 1 cut(s) 1954
AvaII GGWCC 2 cut(s) 599, 1310
BaeI ACNNNNGTAYC 2 cut(s) 495, 528
BanI GGYRCC 3 cut(s) 178, 359, 859
BanII GRGCYC 1 cut(s) 1515
BbsI GAAGAC 2 cut(s) 1438, 1467
Bbv12I GWGCWC 3 cut(s) 1186, 1515, 1731
BbvI GCAGC 4 cut(s) 400, 513, 965, 2288
BccI CCATC 6 cut(s) 241, 296, 782, 1341, 1797, 2278
BciT130I CCWGG 5 cut(s) 275, 922, 939, 1538, 2096
BclI TGATCA 1 cut(s) 837
BcnI CCSGG 2 cut(s) 183, 2030
BcoDI GTCTC 2 cut(s) 252, 347
BfaI CTAG 7 cut(s) 717, 1694, 1829, 1916, 1955, 2249, 2363
BfmI CTRYAG 2 cut(s) 728, 1144
BfoI RGCGCY 1 cut(s) 863
BisI GCNGC 5 cut(s) 389, 502, 858, 979, 2277
BlpI GCTNAGC 1 cut(s) 1846
BlsI GCNGC 5 cut(s) 390, 503, 859, 980, 2278
Bme1390I CCNGG 7 cut(s) 183, 275, 922, 939, 1538, 2030, 2096
Bme18I GGWCC 2 cut(s) 599, 1310
BmeRI GACNNNNNGTC 1 cut(s) 1308
BmgBI CACGTC 1 cut(s) 1894
BmgT120I GGNCC 4 cut(s) 599, 624, 1310, 2026
BmiI GGNNCC 7 cut(s) 180, 307, 361, 367, 861, 2028, 2270
BmrFI CCNGG 7 cut(s) 183, 275, 922, 939, 1538, 2030, 2096
BmsI GCATC 1 cut(s) 946
BmtI GCTAGC 1 cut(s) 1958
BpiI GAAGAC 2 cut(s) 1438, 1467
BplI GAGNNNNNCTC 2 cut(s) 1965, 1997
BpmI CTGGAG 4 cut(s) 897, 1607, 2117, 2156
Bpu1102I GCTNAGC 1 cut(s) 1846
Bpu14I TTCGAA 1 cut(s) 2050
BpuEI CTTGAG 2 cut(s) 1252, 1499
BpuMI CCSGG 2 cut(s) 183, 2030
BsaAI YACGTR 1 cut(s) 162
BsaBI GATNNNNATC 2 cut(s) 792, 1629
BsaHI GRCGYC 1 cut(s) 860
BsaI GGTCTC 1 cut(s) 347
BsaJI CCNNGG 3 cut(s) 309, 920, 2028
BsaWI WCCGGW 1 cut(s) 1331
Bsc4I CCNNNNNNNGG 6 cut(s) 243, 348, 1132, 1338, 2034, 2035
Bse118I RCCGGY 4 cut(s) 356, 362, 1125, 1331
Bse1I ACTGG 3 cut(s) 376, 783, 1743
Bse3DI GCAATG 2 cut(s) 1323, 2298
Bse8I GATNNNNATC 2 cut(s) 792, 1629
BseBI CCWGG 5 cut(s) 275, 922, 939, 1538, 2096
BseDI CCNNGG 3 cut(s) 309, 920, 2028
BseGI GGATG 5 cut(s) 252, 337, 1597, 1808, 2236
BseJI GATNNNNATC 2 cut(s) 792, 1629
BseLI CCNNNNNNNGG 6 cut(s) 243, 348, 1132, 1338, 2034, 2035
BseMI GCAATG 2 cut(s) 1323, 2298
BseMII CTCAG 4 cut(s) 1731, 1737, 1982, 2012
BseNI ACTGG 3 cut(s) 376, 783, 1743
BseRI GAGGAG 2 cut(s) 464, 2165
BseXI GCAGC 4 cut(s) 400, 513, 965, 2288
BseYI CCCAGC 1 cut(s) 1546
BsgI GTGCAG 1 cut(s) 1052
BshFI GGCC 3 cut(s) 273, 625, 2027
BshNI GGYRCC 3 cut(s) 178, 359, 859
BshTI ACCGGT 1 cut(s) 1331
BsiHKAI GWGCWC 3 cut(s) 1186, 1515, 1731
BsiSI CCGG 6 cut(s) 182, 357, 363, 1126, 1332, 2030
BslFI GGGAC 1 cut(s) 997
BslI CCNNNNNNNGG 6 cut(s) 243, 348, 1132, 1338, 2034, 2035
BsmAI GTCTC 2 cut(s) 252, 347
BsmFI GGGAC 1 cut(s) 997
BsmI GAATGC 2 cut(s) 1242, 2112
BsnI GGCC 3 cut(s) 273, 625, 2027
Bso31I GGTCTC 1 cut(s) 347
Bsp119I TTCGAA 1 cut(s) 2050
Bsp1286I GDGCHC 3 cut(s) 1186, 1515, 1731
Bsp143I GATC 5 cut(s) 229, 837, 1063, 2091, 2239
Bsp1720I GCTNAGC 1 cut(s) 1846
Bsp19I CCATGG 1 cut(s) 309
BspACI CCGC 4 cut(s) 78, 769, 857, 1040
BspANI GGCC 3 cut(s) 273, 625, 2027
BspCNI CTCAG 4 cut(s) 1730, 1738, 1981, 2011
BspLI GGNNCC 7 cut(s) 180, 307, 361, 367, 861, 2028, 2270
BspMAI CTGCAG 1 cut(s) 732
BspOI GCTAGC 1 cut(s) 1958
BspPI GGATC 2 cut(s) 2086, 2234
BspQI GCTCTTC 2 cut(s) 106, 1536
BspT104I TTCGAA 1 cut(s) 2050
BspT107I GGYRCC 3 cut(s) 178, 359, 859
BspTNI GGTCTC 1 cut(s) 347
BsrDI GCAATG 2 cut(s) 1323, 2298
BsrFI RCCGGY 4 cut(s) 356, 362, 1125, 1331
BsrI ACTGG 3 cut(s) 376, 783, 1743
BssAI RCCGGY 4 cut(s) 356, 362, 1125, 1331
BssECI CCNNGG 3 cut(s) 309, 920, 2028
BssMI GATC 5 cut(s) 229, 837, 1063, 2091, 2239
BssNI GRCGYC 1 cut(s) 860
BssT1I CCWWGG 1 cut(s) 309
Bst2UI CCWGG 5 cut(s) 275, 922, 939, 1538, 2096
Bst4CI ACNGT 4 cut(s) 16, 238, 1922, 2078
Bst6I CTCTTC 7 cut(s) 106, 520, 1014, 1536, 1546, 2142, 2208
BstACI GRCGYC 1 cut(s) 860
BstAPI GCANNNNNTGC 1 cut(s) 1382
BstBAI YACGTR 1 cut(s) 162
BstBI TTCGAA 1 cut(s) 2050
BstC8I GCNNGC 3 cut(s) 849, 983, 1956
BstDEI CTNAG 7 cut(s) 797, 987, 1717, 1746, 1846, 1968, 1998
BstDSI CCRYGG 1 cut(s) 309
BstF5I GGATG 5 cut(s) 252, 337, 1597, 1808, 2236
BstH2I RGCGCY 1 cut(s) 863
BstHHI GCGC 2 cut(s) 388, 862
BstKTI GATC 5 cut(s) 232, 840, 1066, 2094, 2242
BstMAI GTCTC 2 cut(s) 252, 347
BstMBI GATC 5 cut(s) 229, 837, 1063, 2091, 2239
BstMWI GCNNNNNNNGC 5 cut(s) 857, 1039, 1382, 1671, 1960
BstNI CCWGG 5 cut(s) 275, 922, 939, 1538, 2096
BstNSI RCATGY 1 cut(s) 1005
BstSCI CCNGG 7 cut(s) 181, 273, 920, 937, 1536, 2028, 2094
BstSFI CTRYAG 2 cut(s) 728, 1144
BstV1I GCAGC 4 cut(s) 400, 513, 965, 2288
BstV2I GAAGAC 2 cut(s) 1438, 1467
BsuRI GGCC 3 cut(s) 273, 625, 2027
BtgI CCRYGG 1 cut(s) 309
BtrI CACGTC 1 cut(s) 1894
BtsCI GGATG 5 cut(s) 252, 337, 1597, 1808, 2236
BtsIMutI CAGTG 6 cut(s) 369, 462, 742, 776, 1927, 2352
Cac8I GCNNGC 3 cut(s) 849, 983, 1956
CaiI CAGNNNCTG 2 cut(s) 394, 1568
CfoI GCGC 2 cut(s) 388, 862
Cfr10I RCCGGY 4 cut(s) 356, 362, 1125, 1331
Cfr13I GGNCC 4 cut(s) 599, 624, 1310, 2026
CseI GACGC 1 cut(s) 284
Csp6I GTAC 3 cut(s) 179, 432, 999
CspAI ACCGGT 1 cut(s) 1331
CspCI CAANNNNNGTGG 2 cut(s) 358, 393
CviQI GTAC 3 cut(s) 179, 432, 999
DdeI CTNAG 7 cut(s) 797, 987, 1717, 1746, 1846, 1968, 1998
DinI GGCGCC 1 cut(s) 861
DpnI GATC 5 cut(s) 231, 839, 1065, 2093, 2241
DpnII GATC 5 cut(s) 229, 837, 1063, 2091, 2239
DrdI GACNNNNNNGTC 1 cut(s) 807
DriI GACNNNNNGTC 1 cut(s) 1308
DseDI GACNNNNNNGTC 1 cut(s) 807
Eam1104I CTCTTC 7 cut(s) 106, 520, 1014, 1536, 1546, 2142, 2208
Eam1105I GACNNNNNGTC 1 cut(s) 1308
EarI CTCTTC 7 cut(s) 106, 520, 1014, 1536, 1546, 2142, 2208
Ecl136II GAGCTC 1 cut(s) 1513
Eco130I CCWWGG 1 cut(s) 309
Eco24I GRGCYC 1 cut(s) 1515
Eco31I GGTCTC 1 cut(s) 347
Eco32I GATATC 1 cut(s) 1469
Eco47I GGWCC 2 cut(s) 599, 1310
Eco53kI GAGCTC 1 cut(s) 1513
Eco57I CTGAAG 1 cut(s) 1545
EcoICRI GAGCTC 1 cut(s) 1513
EcoRI GAATTC 1 cut(s) 397
EcoRII CCWGG 5 cut(s) 273, 920, 937, 1536, 2094
EcoRV GATATC 1 cut(s) 1469
EcoT14I CCWWGG 1 cut(s) 309
EcoT38I GRGCYC 1 cut(s) 1515
EgeI GGCGCC 1 cut(s) 861
EheI GGCGCC 1 cut(s) 861
ErhI CCWWGG 1 cut(s) 309
FalI AAGNNNNNCTT 4 cut(s) 1543, 1575, 2151, 2183
FaqI GGGAC 1 cut(s) 997
FauNDI CATATG 1 cut(s) 209
FbaI TGATCA 1 cut(s) 837
Fnu4HI GCNGC 5 cut(s) 389, 502, 858, 979, 2277
FokI GGATG 5 cut(s) 259, 344, 1604, 1815, 2243
FriOI GRGCYC 1 cut(s) 1515
Fsp4HI GCNGC 5 cut(s) 389, 502, 858, 979, 2277
FspBI CTAG 7 cut(s) 717, 1694, 1829, 1916, 1955, 2249, 2363
GlaI GCGC 2 cut(s) 387, 861
GluI GCNGC 5 cut(s) 389, 502, 858, 979, 2277
GsaI CCCAGC 1 cut(s) 1550
GsuI CTGGAG 4 cut(s) 897, 1607, 2117, 2156
HaeII RGCGCY 1 cut(s) 863
HaeIII GGCC 3 cut(s) 273, 625, 2027
HapII CCGG 6 cut(s) 182, 357, 363, 1126, 1332, 2030
HgaI GACGC 1 cut(s) 284
HhaI GCGC 2 cut(s) 388, 862
Hin1I GRCGYC 1 cut(s) 860
Hin6I GCGC 2 cut(s) 386, 860
HinP1I GCGC 2 cut(s) 386, 860
HincII GTYRAC 2 cut(s) 379, 774
HindII GTYRAC 2 cut(s) 379, 774
HindIII AAGCTT 2 cut(s) 448, 613
HinfI GANTC 7 cut(s) 168, 278, 1036, 1690, 2002, 2342, 2378
HpaII CCGG 6 cut(s) 182, 357, 363, 1126, 1332, 2030
HphI GGTGA 6 cut(s) 124, 847, 1197, 1354, 1777, 1850
Hpy166II GTNNAC 5 cut(s) 216, 379, 774, 1785, 2074
Hpy188I TCNGA 9 cut(s) 130, 396, 417, 651, 1430, 1720, 1747, 1971, 2001
Hpy188III TCNNGA 9 cut(s) 282, 299, 316, 602, 756, 1516, 1586, 1612, 1871
Hpy8I GTNNAC 5 cut(s) 216, 379, 774, 1785, 2074
Hpy99I CGWCG 1 cut(s) 300
HpyAV CCTTC 5 cut(s) 1154, 1488, 2057, 2101, 2246
HpyCH4III ACNGT 4 cut(s) 16, 238, 1922, 2078
HpyCH4IV ACGT 2 cut(s) 161, 1893
HpyF10VI GCNNNNNNNGC 5 cut(s) 857, 1039, 1382, 1671, 1960
HpyF3I CTNAG 7 cut(s) 797, 987, 1717, 1746, 1846, 1968, 1998
HpySE526I ACGT 2 cut(s) 161, 1893
Hsp92I GRCGYC 1 cut(s) 860
HspAI GCGC 2 cut(s) 386, 860
KasI GGCGCC 1 cut(s) 859
KpnI GGTACC 1 cut(s) 182
Ksp22I TGATCA 1 cut(s) 837
Kzo9I GATC 5 cut(s) 229, 837, 1063, 2091, 2239
LguI GCTCTTC 2 cut(s) 106, 1536
LmnI GCTCC 4 cut(s) 311, 371, 2152, 2322
Lsp1109I GCAGC 4 cut(s) 400, 513, 965, 2288
LweI GCATC 1 cut(s) 946
MaeI CTAG 7 cut(s) 717, 1694, 1829, 1916, 1955, 2249, 2363
MaeII ACGT 2 cut(s) 161, 1893
MaeIII GTNAC 6 cut(s) 334, 962, 1169, 1203, 1447, 1889
MalI GATC 5 cut(s) 231, 839, 1065, 2093, 2241
MboI GATC 5 cut(s) 229, 837, 1063, 2091, 2239
MfeI CAATTG 2 cut(s) 1089, 1668
MhlI GDGCHC 3 cut(s) 1186, 1515, 1731
Mly113I GGCGCC 1 cut(s) 860
MseI TTAA 3 cut(s) 813, 1250, 2289
MslI CAYNNNNRTG 5 cut(s) 160, 330, 922, 1440, 1988
MspI CCGG 6 cut(s) 182, 357, 363, 1126, 1332, 2030
MspR9I CCNGG 7 cut(s) 183, 275, 922, 939, 1538, 2030, 2096
MunI CAATTG 2 cut(s) 1089, 1668
Mva1269I GAATGC 2 cut(s) 1242, 2112
MvaI CCWGG 5 cut(s) 275, 922, 939, 1538, 2096
MwoI GCNNNNNNNGC 5 cut(s) 857, 1039, 1382, 1671, 1960
NarI GGCGCC 1 cut(s) 860
NciI CCSGG 2 cut(s) 183, 2030
NcoI CCATGG 1 cut(s) 309
NdeI CATATG 1 cut(s) 209
NdeII GATC 5 cut(s) 229, 837, 1063, 2091, 2239
NheI GCTAGC 1 cut(s) 1954
NlaIV GGNNCC 7 cut(s) 180, 307, 361, 367, 861, 2028, 2270
NmuCI GTSAC 3 cut(s) 334, 1203, 1889
NspI RCATGY 1 cut(s) 1005
NspV TTCGAA 1 cut(s) 2050
OliI CACNNNNGTG 1 cut(s) 922
PciSI GCTCTTC 2 cut(s) 106, 1536
PctI GAATGC 2 cut(s) 1242, 2112
PfeI GAWTC 7 cut(s) 168, 278, 1036, 1690, 2002, 2342, 2378
PflMI CCANNNNNTGG 1 cut(s) 348
PfoI TCCNGGA 2 cut(s) 1536, 2094
PinAI ACCGGT 1 cut(s) 1331
PkrI GCNGC 5 cut(s) 390, 503, 859, 980, 2278
PluTI GGCGCC 1 cut(s) 863
Ppu21I YACGTR 1 cut(s) 162
Psp124BI GAGCTC 1 cut(s) 1515
Psp6I CCWGG 5 cut(s) 273, 920, 937, 1536, 2094
PspFI CCCAGC 1 cut(s) 1546
PspGI CCWGG 5 cut(s) 273, 920, 937, 1536, 2094
PspN4I GGNNCC 7 cut(s) 180, 307, 361, 367, 861, 2028, 2270
PspPI GGNCC 4 cut(s) 599, 624, 1310, 2026
PstI CTGCAG 1 cut(s) 732
PstNI CAGNNNCTG 2 cut(s) 394, 1568
RsaI GTAC 3 cut(s) 180, 433, 1000
RsaNI GTAC 3 cut(s) 179, 432, 999
RseI CAYNNNNRTG 5 cut(s) 160, 330, 922, 1440, 1988
SacI GAGCTC 1 cut(s) 1515
SapI GCTCTTC 2 cut(s) 106, 1536
SaqAI TTAA 3 cut(s) 813, 1250, 2289
SatI GCNGC 5 cut(s) 389, 502, 858, 979, 2277
Sau3AI GATC 5 cut(s) 229, 837, 1063, 2091, 2239
Sau96I GGNCC 4 cut(s) 599, 624, 1310, 2026
ScrFI CCNGG 7 cut(s) 183, 275, 922, 939, 1538, 2030, 2096
SduI GDGCHC 3 cut(s) 1186, 1515, 1731
SfaNI GCATC 1 cut(s) 946
SfcI CTRYAG 2 cut(s) 728, 1144
SfoI GGCGCC 1 cut(s) 861
SfuI TTCGAA 1 cut(s) 2050
SinI GGWCC 2 cut(s) 599, 1310
SmiMI CAYNNNNRTG 5 cut(s) 160, 330, 922, 1440, 1988
SmlI CTYRAG 2 cut(s) 1231, 1514
SmoI CTYRAG 2 cut(s) 1231, 1514
SsiI CCGC 4 cut(s) 78, 769, 857, 1040
SspDI GGCGCC 1 cut(s) 859
SspI AATATT 1 cut(s) 1277
SspMI CTAG 7 cut(s) 717, 1694, 1829, 1916, 1955, 2249, 2363
SstI GAGCTC 1 cut(s) 1515
StyD4I CCNGG 7 cut(s) 181, 273, 920, 937, 1536, 2028, 2094
StyI CCWWGG 1 cut(s) 309
TaaI ACNGT 4 cut(s) 16, 238, 1922, 2078
TaiI ACGT 2 cut(s) 164, 1896
TaqI TCGA 7 cut(s) 298, 744, 755, 1007, 2005, 2050, 2116
TauI GCSGC 1 cut(s) 860
TfiI GAWTC 7 cut(s) 168, 278, 1036, 1690, 2002, 2342, 2378
Tru1I TTAA 3 cut(s) 813, 1250, 2289
Tru9I TTAA 3 cut(s) 813, 1250, 2289
TscAI CASTG 6 cut(s) 376, 469, 742, 783, 1927, 2352
TseFI GTSAC 3 cut(s) 334, 1203, 1889
TseI GCWGC 4 cut(s) 388, 501, 978, 2276
Tsp45I GTSAC 3 cut(s) 334, 1203, 1889
TspGWI ACGGA 1 cut(s) 1479
TspRI CASTG 6 cut(s) 376, 469, 742, 783, 1927, 2352
Van91I CCANNNNNTGG 1 cut(s) 348
VpaK11BI GGWCC 2 cut(s) 599, 1310
XceI RCATGY 1 cut(s) 1005
XspI CTAG 7 cut(s) 717, 1694, 1829, 1916, 1955, 2249, 2363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.