RchiOBHm_Chr3g0464911

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000166
Physical Location & Seq
Reverse (-)
11864566 .. 11867398
2833 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43110

Sequence Viewer

Length: 2436 bp
ATGGAAGTTCCCAAGTTTCTCCTCCTTTTGCTATTTGCAGCAACATTTGCTCAGAGTCAAGAACGGTTACAAGGGATGCCAAGCTTAAGGAAAGGGAACTCCTTGAAAGTTGAGGAGGAGACCAACGTCTTGGTTTCACCAGATGGAACTTTTTCTAGTGGATTTTACAAAGTTGGTGCCAATGCCTCCTGTTATTCAATATGGTTCACCAATAGTGCCAATAAAACAATTGTCTGGATGGCTAACAGAGACAAGCCTGTGAGCAAAAGAGGCTCAAAGCTAACCCTCCATGGAAGTGGCAACCTGGTTTTGACAGATGCACTTGGTACACTCGTGTGGTCGACCAACACAATCTCTAACGAAGACACGGAAGTTGTGCTTCTTGACACAGGAAATTTGGTGCTGAGGAATCAAGCAAAGAGGGTAATCTGGCAGAGTTTTGATTCTCCCACAGATACACTTCTACCAACACAGCCACTCACCAAGAACTCAAGCTTGGTGTCCATGAGAAGCCAAGGTACATACTTATCTGGGTTCTATAACTTCAAATTCGACGATAACAATGTCTTGTTTCTCATCTACAATGGCCCTCAACTTTCTAGTGTTTATTGGCCCCGGATTATTCCAAGTGTTTTTGAAAGTGGTAGAAATCCTTACAACAGCTCAAGGGTGGCAATTTTAGATGTGGCTGGACAATTTATTTCTAGTGACAATATGCAGTTCAATGCATCTGACTACGGGGTTGGTCCAAAGCGGCGTCTAACGGTGGATTATGATGGCATCTTAAGACTGTACAGTCTTCATGAATCGACAGGGTTGTGGAAACTCTCATGGTTGCCTGATAGTGTTGATGCATGCCGGGTTCAGGGCTTGTGCGGTGAATATGGTATTTGCACATACAAACCACAACCTACTTGTACCTGCCCTTCGGGGTTTTCCCTAAACGATCCCTCAGACTGGTCCAAAGGCTGCTCACCTCCCTTCAATTTGACTCAACTCACTCAAGATACAAGCAAGCTGGATTTCCTGGAGCTTCCTTACACAGATTACTATGGATATGACATGGCAACCTATAATCGTGGAATCTCTTTTGAAGCATGCAGGAATTCATGTCTAATGCATTCAAGTTGCTTGGGATTCGGATATGCACTGGATGGGATCGGAGAATGTTTCCCCAAGAGTCTTCTGCTTAATGGATATCGTATGTCGAATGTTAAGAGCATCATCCATGTGAAGATTCCAAAAGGTTTTCTGAACCCTGGTGCAGTCCAAACCAGACTAGAAACACATGATTTGAACTGTTCAGCGGCAAAGTTTGTTGTAAGTACTGATCTCGAAACAGAAAAGGGCAATGGAAACCAGTACATGAAATACCTCATTGGATTTTTGAGTTCCTTTGGGCTAATTGAAGCAATCGGCATCAGTTTGACATGGTGGTTTGTGTTCCGAAAGAAAGCTCGTGACGAAATGATGAACATGGGGTACATGGCATTAGCCATAAATGCTGTAGGATTTAAACATTTCACCTATGCAGAACTAAAGAAAGCAACCAATGACTTCAAACAGGAGATAGGAAAAGGGGGGTTCGGCACAGTCTATAAAGGGGTTCTGGATGGTGACAGAGTTGTAGCTGTGAAGAGACTAGAAGGCATTGTACAAGGAGATGCAGAGTTTTGGGCAGAGGTTAGTGTCATAGGGAATATCAACCACAGGAACTTGGTTAAGCTTTGGGGTTTCTGTGCTGAGAATGAACATAAGCTGTTGGTATATGAGTATCTGGAGAATGGATCCTTGGATAAACTCTTGTTTTCTGATGTTGAATTAGGATTGGAGCAGCGATACAATATTGCATTAGGCACTGCAAAGGGTTTGTCATATCTACATGAGGAGTGTCTGGAATGGGTACTCCACTGTGATGTAAAGCCTCAAAATATACTGTTAGATGACCATCTTGAACCTAAGGTGGCAGATTTTGGCATGTCAAAGTTATTCAAAGTCAACATTGATGATGCAGGCATTGGATTTTCCAGAGTTCGAGGCACCAGAGGTTATATGGCTCCAGAGTGGATGGTGGACCTTAAAATTGATGCAAAGGCAGATGTCTACAGCTATGGGATTGTTTTGTTGGAGCTACTGAGTGGAAAGAGTGCATCTATTCTACTTTCAGCTTTTGCACAAGAGTACACTGAGCACAACCAACTGGTACAATGTGTGACTGAAAAGATCAGAGTCGAAGGGCTTAAGGAAGTGATTGATCCTAGACTCTATCATAAATTCAACAAGAAGAAGCTCGAAAGATTGATGAAGGTTGCTCTTCTGTGTGTGCAAGAAGACCGCAGTGCAAGACCTGCCATGAGCAAGGTTGTAGAGCTTCTACTTGAGAATGATGAGGGAAGAGTAGATGATGAAGAAGAAGATCATATAATTAGTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

811

Amino Acids

90.91

Weight (kDa)

5.82

Isoelectric Point (pI)

35.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 164 2.6e-26 D-mannose binding lectin
S_locus_glycop PF00954 251 - 313 1.3e-08 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 520 - 792 1e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 521 - 789 9.1e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 795
Acc36I ACCTGC 2 cut(s) 929, 2356
AccB1I GGYRCC 2 cut(s) 176, 2039
AccI GTMKAC 2 cut(s) 341, 2103
AciI CCGC 4 cut(s) 754, 876, 1307, 2335
AclWI GGATC 5 cut(s) 941, 1166, 1782, 1795, 2249
AcsI RAATTY 4 cut(s) 394, 548, 1105, 2273
AcyI GRCGYC 1 cut(s) 757
AfiI CCNNNNNNNGG 2 cut(s) 865, 957
AflII CTTAAG 3 cut(s) 85, 784, 2240
AjnI CCWGG 3 cut(s) 303, 1026, 1258
AjuI GAANNNNNNNTTGG 4 cut(s) 479, 511, 1775, 1807
AleI CACNNNNGTG 1 cut(s) 334
Alw21I GWGCWC 1 cut(s) 2193
Alw26I GTCTC 3 cut(s) 113, 243, 1633
AlwI GGATC 5 cut(s) 941, 1166, 1782, 1795, 2249
AoxI GGCC 2 cut(s) 586, 611
ApeKI GCWGC 3 cut(s) 38, 969, 1834
ApoI RAATTY 4 cut(s) 394, 548, 1105, 2273
ArsI GACNNNNNNTTYG 2 cut(s) 1856, 1888
Asp700I GAANNNNTTC 1 cut(s) 151
AspS9I GGNCC 5 cut(s) 587, 612, 746, 960, 2074
AsuC2I CCSGG 2 cut(s) 616, 860
AsuHPI GGTGA 7 cut(s) 129, 199, 472, 890, 966, 1516, 1628
AvaII GGWCC 3 cut(s) 746, 960, 2074
AxyI CCTNAGG 1 cut(s) 1959
BaeI ACNNNNGTAYC 2 cut(s) 318, 351
BamHI GGATCC 1 cut(s) 1787
BanI GGYRCC 2 cut(s) 176, 2039
BarI GAAGNNNNNNTAC 6 cut(s) 502, 534, 910, 942, 1638, 1670
BauI CACGAG 2 cut(s) 332, 1458
BbsI GAAGAC 4 cut(s) 369, 791, 1175, 2337
Bbv12I GWGCWC 1 cut(s) 2193
BbvCI CCTCAGC 1 cut(s) 404
BbvI GCAGC 3 cut(s) 50, 956, 1846
BccI CCATC 7 cut(s) 137, 232, 770, 1148, 1607, 1956, 2062
BciT130I CCWGG 3 cut(s) 305, 1028, 1260
BcnI CCSGG 2 cut(s) 616, 860
BcoDI GTCTC 3 cut(s) 113, 243, 1633
BfaI CTAG 6 cut(s) 156, 600, 705, 1280, 1643, 2259
BfmI CTRYAG 2 cut(s) 1506, 2104
BfrI CTTAAG 3 cut(s) 85, 784, 2240
BfuAI ACCTGC 2 cut(s) 929, 2356
BisI GCNGC 5 cut(s) 39, 755, 970, 1308, 1835
BlsI GCNGC 5 cut(s) 40, 756, 971, 1309, 1836
BmcAI AGTACT 1 cut(s) 1327
Bme1390I CCNGG 5 cut(s) 305, 616, 860, 1028, 1260
Bme18I GGWCC 3 cut(s) 746, 960, 2074
BmgT120I GGNCC 5 cut(s) 587, 612, 746, 960, 2074
BmiI GGNNCC 5 cut(s) 178, 614, 1789, 2041, 2058
BmrFI CCNGG 5 cut(s) 305, 616, 860, 1028, 1260
BoxI GACNNNNGTC 1 cut(s) 125
BpiI GAAGAC 4 cut(s) 369, 791, 1175, 2337
BpmI CTGGAG 3 cut(s) 1049, 1799, 2043
Bpu10I CCTNAGC 1 cut(s) 404
BpuEI CTTGAG 4 cut(s) 475, 649, 987, 2399
BpuMI CCSGG 2 cut(s) 616, 860
BsaBI GATNNNNATC 1 cut(s) 1947
BsaHI GRCGYC 1 cut(s) 757
BsaI GGTCTC 1 cut(s) 113
BsaJI CCNNGG 5 cut(s) 289, 514, 614, 1258, 1791
Bsc4I CCNNNNNNNGG 2 cut(s) 865, 957
Bse1I ACTGG 4 cut(s) 962, 1155, 1360, 2205
Bse21I CCTNAGG 1 cut(s) 1959
Bse3DI GCAATG 1 cut(s) 1357
Bse8I GATNNNNATC 1 cut(s) 1947
BseBI CCWGG 3 cut(s) 305, 1028, 1260
BseDI CCNNGG 5 cut(s) 289, 514, 614, 1258, 1791
BseGI GGATG 6 cut(s) 81, 243, 1159, 1224, 1618, 2073
BseJI GATNNNNATC 1 cut(s) 1947
BseLI CCNNNNNNNGG 2 cut(s) 865, 957
BseMI GCAATG 1 cut(s) 1357
BseMII CTCAG 6 cut(s) 65, 395, 966, 1734, 2126, 2178
BseNI ACTGG 4 cut(s) 962, 1155, 1360, 2205
BseRI GAGGAG 4 cut(s) 11, 128, 131, 1901
BseXI GCAGC 3 cut(s) 50, 956, 1846
BsgI GTGCAG 1 cut(s) 1284
BshFI GGCC 2 cut(s) 588, 613
BshNI GGYRCC 2 cut(s) 176, 2039
BsiHKAI GWGCWC 1 cut(s) 2193
BsiSI CCGG 2 cut(s) 616, 859
BslI CCNNNNNNNGG 2 cut(s) 865, 957
BsmAI GTCTC 3 cut(s) 113, 243, 1633
BsmI GAATGC 1 cut(s) 1120
BsnI GGCC 2 cut(s) 588, 613
Bso31I GGTCTC 1 cut(s) 113
Bsp1286I GDGCHC 1 cut(s) 2193
Bsp1407I TGTACA 2 cut(s) 792, 1654
Bsp143I GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2416
Bsp19I CCATGG 1 cut(s) 289
BspACI CCGC 4 cut(s) 754, 876, 1307, 2335
BspANI GGCC 2 cut(s) 588, 613
BspCNI CTCAG 6 cut(s) 64, 396, 965, 1735, 2127, 2179
BspHI TCATGA 1 cut(s) 802
BspLI GGNNCC 5 cut(s) 178, 614, 1789, 2041, 2058
BspMI ACCTGC 2 cut(s) 929, 2356
BspPI GGATC 5 cut(s) 941, 1166, 1782, 1795, 2249
BspQI GCTCTTC 1 cut(s) 2319
BspT107I GGYRCC 2 cut(s) 176, 2039
BspTI CTTAAG 3 cut(s) 85, 784, 2240
BspTNI GGTCTC 1 cut(s) 113
BsrDI GCAATG 1 cut(s) 1357
BsrGI TGTACA 2 cut(s) 792, 1654
BsrI ACTGG 4 cut(s) 962, 1155, 1360, 2205
BssECI CCNNGG 5 cut(s) 289, 514, 614, 1258, 1791
BssMI GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2416
BssNI GRCGYC 1 cut(s) 757
BssSI CACGAG 2 cut(s) 332, 1458
BssT1I CCWWGG 3 cut(s) 289, 514, 1791
Bst2BI CACGAG 2 cut(s) 332, 1458
Bst2UI CCWGG 3 cut(s) 305, 1028, 1260
Bst4CI ACNGT 8 cut(s) 66, 766, 792, 797, 1301, 1594, 1913, 1938
Bst6I CTCTTC 3 cut(s) 1631, 2319, 2389
BstACI GRCGYC 1 cut(s) 757
BstAFI CTTAAG 3 cut(s) 85, 784, 2240
BstAPI GCANNNNNTGC 2 cut(s) 47, 2348
BstAUI TGTACA 2 cut(s) 792, 1654
BstC8I GCNNGC 4 cut(s) 856, 1016, 1099, 2014
BstDEI CTNAG 7 cut(s) 51, 404, 952, 1743, 1959, 2135, 2187
BstDSI CCRYGG 1 cut(s) 289
BstF5I GGATG 6 cut(s) 81, 243, 1159, 1224, 1618, 2073
BstKTI GATC 7 cut(s) 949, 1161, 1333, 1790, 2226, 2257, 2419
BstMAI GTCTC 3 cut(s) 113, 243, 1633
BstMBI GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2416
BstMWI GCNNNNNNNGC 4 cut(s) 47, 270, 1502, 2348
BstNI CCWGG 3 cut(s) 305, 1028, 1260
BstNSI RCATGY 3 cut(s) 858, 1101, 1981
BstPAI GACNNNNGTC 1 cut(s) 125
BstSCI CCNGG 5 cut(s) 303, 614, 858, 1026, 1258
BstSFI CTRYAG 2 cut(s) 1506, 2104
BstV1I GCAGC 3 cut(s) 50, 956, 1846
BstV2I GAAGAC 4 cut(s) 369, 791, 1175, 2337
BstX2I RGATCY 1 cut(s) 1787
BstXI CCANNNNNNTGG 2 cut(s) 130, 296
BstYI RGATCY 1 cut(s) 1787
Bsu36I CCTNAGG 1 cut(s) 1959
BsuRI GGCC 2 cut(s) 588, 613
BtgI CCRYGG 1 cut(s) 289
BtsCI GGATG 6 cut(s) 81, 243, 1159, 1224, 1618, 2073
BtsI GCAGTG 2 cut(s) 1857, 2344
BtsIMutI CAGTG 5 cut(s) 1148, 1857, 1909, 2184, 2344
BveI ACCTGC 2 cut(s) 929, 2356
Cac8I GCNNGC 4 cut(s) 856, 1016, 1099, 2014
CciI TCATGA 1 cut(s) 802
Cfr13I GGNCC 5 cut(s) 587, 612, 746, 960, 2074
CseI GACGC 1 cut(s) 746
CsiI ACCWGGT 1 cut(s) 303
DdeI CTNAG 7 cut(s) 51, 404, 952, 1743, 1959, 2135, 2187
DpnI GATC 7 cut(s) 948, 1160, 1332, 1789, 2225, 2256, 2418
DpnII GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2416
DraI TTTAAA 1 cut(s) 1516
DrdI GACNNNNNNGTC 1 cut(s) 795
DseDI GACNNNNNNGTC 1 cut(s) 795
Eam1104I CTCTTC 3 cut(s) 1631, 2319, 2389
EarI CTCTTC 3 cut(s) 1631, 2319, 2389
Eco130I CCWWGG 3 cut(s) 289, 514, 1791
Eco31I GGTCTC 1 cut(s) 113
Eco32I GATATC 1 cut(s) 1199
Eco47I GGWCC 3 cut(s) 746, 960, 2074
Eco81I CCTNAGG 1 cut(s) 1959
EcoRI GAATTC 1 cut(s) 1105
EcoRII CCWGG 3 cut(s) 303, 1026, 1258
EcoRV GATATC 1 cut(s) 1199
EcoT14I CCWWGG 3 cut(s) 289, 514, 1791
EcoT22I ATGCAT 3 cut(s) 730, 856, 1122
ErhI CCWWGG 3 cut(s) 289, 514, 1791
FalI AAGNNNNNCTT 2 cut(s) 363, 395
FblI GTMKAC 2 cut(s) 341, 2103
Fnu4HI GCNGC 5 cut(s) 39, 755, 970, 1308, 1835
FokI GGATG 6 cut(s) 88, 250, 1166, 1211, 1625, 2080
Fsp4HI GCNGC 5 cut(s) 39, 755, 970, 1308, 1835
FspBI CTAG 6 cut(s) 156, 600, 705, 1280, 1643, 2259
GluI GCNGC 5 cut(s) 39, 755, 970, 1308, 1835
GsuI CTGGAG 3 cut(s) 1049, 1799, 2043
HaeIII GGCC 2 cut(s) 588, 613
HapII CCGG 2 cut(s) 616, 859
HgaI GACGC 1 cut(s) 746
Hin1I GRCGYC 1 cut(s) 757
HincII GTYRAC 2 cut(s) 342, 1999
HindII GTYRAC 2 cut(s) 342, 1999
HindIII AAGCTT 3 cut(s) 82, 493, 1724
HpaII CCGG 2 cut(s) 616, 859
HphI GGTGA 7 cut(s) 129, 199, 472, 890, 966, 1516, 1628
Hpy166II GTNNAC 7 cut(s) 207, 329, 342, 1999, 2074, 2104, 2184
Hpy188I TCNGA 9 cut(s) 54, 733, 955, 1142, 1163, 1254, 1448, 1813, 2228
Hpy8I GTNNAC 7 cut(s) 207, 329, 342, 1999, 2074, 2104, 2184
Hpy99I CGWCG 1 cut(s) 557
HpyAV CCTTC 5 cut(s) 936, 991, 1640, 2228, 2299
HpyCH4III ACNGT 8 cut(s) 66, 766, 792, 797, 1301, 1594, 1913, 1938
HpyCH4IV ACGT 1 cut(s) 126
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 270, 1502, 2348
HpyF3I CTNAG 7 cut(s) 51, 404, 952, 1743, 1959, 2135, 2187
HpySE526I ACGT 1 cut(s) 126
Hsp92I GRCGYC 1 cut(s) 757
Kzo9I GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2416
LguI GCTCTTC 1 cut(s) 2319
LmnI GCTCC 4 cut(s) 1030, 1831, 2062, 2128
Lsp1109I GCAGC 3 cut(s) 50, 956, 1846
MabI ACCWGGT 1 cut(s) 303
MaeI CTAG 6 cut(s) 156, 600, 705, 1280, 1643, 2259
MaeII ACGT 1 cut(s) 126
MaeIII GTNAC 5 cut(s) 66, 707, 1460, 1616, 2212
MalI GATC 7 cut(s) 948, 1160, 1332, 1789, 2225, 2256, 2418
MboI GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2416
MfeI CAATTG 1 cut(s) 228
MflI RGATCY 1 cut(s) 1787
MhlI GDGCHC 1 cut(s) 2193
MlyI GAGTC 5 cut(s) 64, 985, 1189, 2238, 2256
MmeI TCCRAC 1 cut(s) 2106
Mph1103I ATGCAT 3 cut(s) 730, 856, 1122
MroXI GAANNNNTTC 1 cut(s) 151
MseI TTAA 8 cut(s) 86, 785, 1191, 1215, 1515, 1722, 2079, 2241
MslI CAYNNNNRTG 4 cut(s) 294, 334, 1229, 1914
MspA1I CMGCKG 1 cut(s) 1307
MspCI CTTAAG 3 cut(s) 85, 784, 2240
MspI CCGG 2 cut(s) 616, 859
MspR9I CCNGG 5 cut(s) 305, 616, 860, 1028, 1260
MunI CAATTG 1 cut(s) 228
Mva1269I GAATGC 1 cut(s) 1120
MvaI CCWGG 3 cut(s) 305, 1028, 1260
MwoI GCNNNNNNNGC 4 cut(s) 47, 270, 1502, 2348
NciI CCSGG 2 cut(s) 616, 860
NcoI CCATGG 1 cut(s) 289
NdeII GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2416
NlaIV GGNNCC 5 cut(s) 178, 614, 1789, 2041, 2058
NmuCI GTSAC 4 cut(s) 707, 1460, 1616, 2212
NsiI ATGCAT 3 cut(s) 730, 856, 1122
NspI RCATGY 3 cut(s) 858, 1101, 1981
OliI CACNNNNGTG 1 cut(s) 334
PaeI GCATGC 2 cut(s) 858, 1101
PagI TCATGA 1 cut(s) 802
PciSI GCTCTTC 1 cut(s) 2319
PctI GAATGC 1 cut(s) 1120
PdmI GAANNNNTTC 1 cut(s) 151
PfeI GAWTC 6 cut(s) 409, 443, 806, 1083, 1137, 1237
PfoI TCCNGGA 1 cut(s) 1026
PkrI GCNGC 5 cut(s) 40, 756, 971, 1309, 1836
PleI GAGTC 5 cut(s) 63, 985, 1188, 2237, 2256
PpsI GAGTC 5 cut(s) 63, 985, 1188, 2237, 2256
PshAI GACNNNNGTC 1 cut(s) 125
Psp6I CCWGG 3 cut(s) 303, 1026, 1258
PspGI CCWGG 3 cut(s) 303, 1026, 1258
PspN4I GGNNCC 5 cut(s) 178, 614, 1789, 2041, 2058
PspPI GGNCC 5 cut(s) 587, 612, 746, 960, 2074
PsrI GAACNNNNNNTAC 2 cut(s) 1466, 1498
PsuI RGATCY 1 cut(s) 1787
RseI CAYNNNNRTG 4 cut(s) 294, 334, 1229, 1914
SalI GTCGAC 1 cut(s) 340
SapI GCTCTTC 1 cut(s) 2319
SaqAI TTAA 8 cut(s) 86, 785, 1191, 1215, 1515, 1722, 2079, 2241
SatI GCNGC 5 cut(s) 39, 755, 970, 1308, 1835
Sau3AI GATC 7 cut(s) 946, 1158, 1330, 1787, 2223, 2254, 2416
Sau96I GGNCC 5 cut(s) 587, 612, 746, 960, 2074
ScaI AGTACT 1 cut(s) 1327
SchI GAGTC 5 cut(s) 64, 985, 1189, 2238, 2256
ScrFI CCNGG 5 cut(s) 305, 616, 860, 1028, 1260
SduI GDGCHC 1 cut(s) 2193
SexAI ACCWGGT 1 cut(s) 303
SfcI CTRYAG 2 cut(s) 1506, 2104
SinI GGWCC 3 cut(s) 746, 960, 2074
SmiMI CAYNNNNRTG 4 cut(s) 294, 334, 1229, 1914
SmlI CTYRAG 7 cut(s) 85, 490, 664, 784, 1002, 2240, 2378
SmoI CTYRAG 7 cut(s) 85, 490, 664, 784, 1002, 2240, 2378
SphI GCATGC 2 cut(s) 858, 1101
SsiI CCGC 4 cut(s) 754, 876, 1307, 2335
SspI AATATT 1 cut(s) 1846
SspMI CTAG 6 cut(s) 156, 600, 705, 1280, 1643, 2259
StyD4I CCNGG 5 cut(s) 303, 614, 858, 1026, 1258
StyI CCWWGG 3 cut(s) 289, 514, 1791
TaaI ACNGT 8 cut(s) 66, 766, 792, 797, 1301, 1594, 1913, 1938
TaiI ACGT 1 cut(s) 129
TaqI TCGA 8 cut(s) 341, 552, 809, 1208, 1335, 2035, 2232, 2292
TatI WGTACW 5 cut(s) 792, 1325, 1362, 1654, 2181
TauI GCSGC 2 cut(s) 757, 1310
TfiI GAWTC 6 cut(s) 409, 443, 806, 1083, 1137, 1237
Tru1I TTAA 8 cut(s) 86, 785, 1191, 1215, 1515, 1722, 2079, 2241
Tru9I TTAA 8 cut(s) 86, 785, 1191, 1215, 1515, 1722, 2079, 2241
TscAI CASTG 5 cut(s) 1155, 1864, 1916, 2191, 2344
TseFI GTSAC 4 cut(s) 707, 1460, 1616, 2212
TseI GCWGC 3 cut(s) 38, 969, 1834
Tsp45I GTSAC 4 cut(s) 707, 1460, 1616, 2212
TspDTI ATGAA 8 cut(s) 791, 819, 1098, 1382, 1487, 1764, 2318, 2421
TspGWI ACGGA 1 cut(s) 383
TspRI CASTG 5 cut(s) 1155, 1864, 1916, 2191, 2344
Vha464I CTTAAG 3 cut(s) 85, 784, 2240
VpaK11BI GGWCC 3 cut(s) 746, 960, 2074
XapI RAATTY 4 cut(s) 394, 548, 1105, 2273
XceI RCATGY 3 cut(s) 858, 1101, 1981
XcmI CCANNNNNNNNNTGG 1 cut(s) 2050
XmiI GTMKAC 2 cut(s) 341, 2103
XmnI GAANNNNTTC 1 cut(s) 151
XspI CTAG 6 cut(s) 156, 600, 705, 1280, 1643, 2259
ZrmI AGTACT 1 cut(s) 1327
Zsp2I ATGCAT 3 cut(s) 730, 856, 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.