Rh7AG149000

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000166
Physical Location & Seq
Forward (+)
12084715 .. 12087695
2981 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG149000.1

Sequence Viewer

Length: 1419 bp
ATGGGGTATGATCACCAAGCTATTTCATCCCCAAATTTCCCTTCTTTTCTTATTTTCTGTTTCATCACTGTGTTTTTCTACTCTTCTGCAACTGCAAAAACCCTCTTCACATTACAAAGAGGCTCTTCTCTCTCAGTGAAAAATGATGTATCAGACTTCCTGACTTCCCCAGACAACTCTTTCACATGTGGGTTCTATGGTGTAGGCACCAATGCCTACTGGTTCTCCATCTGGTTCACCCACTCCAGGGACAGAACCGTAATTTGGATGGCCAACAGAAACCGACCGGTCAATGGCTTGGGCTCCAGAACCTCACTGACCCGAGATGGCTCAATGGTCTTGACAGATGTGGATGGCATGCAAGTCTGGTCTCCCGACCTCAACTCTACTTCTGCCAACCTTGCTGAAAGGGCTGAGCTATTGAATTCTGGCAACCTTGTTTTGAGGGGCCCACAAGGTGAAATTCTATGGCAAAGCTTTGATTTTCCTACCAATACTCTTCTCCCTAACCAACTATTTACCAAGGGCATGAAGTTGGTCTCTAATATGTTTGGGAGAGGTAACTTTGGTAGTGGATATTATAGTTTCTATTTTGATAATGACAATGTGTTGAGGCTCATGTATGATGGTCCTGACATTTCAAGTCTTTATTGGCCAAATCCTGGTTATAGTGTGTTTGACAATGGTAGAACAAATTATAACAGTAGCAGAATTGCTGTTTTTGATGATTTGGGTCGTTTTTTGTCCAGTGATCTATGGCGGTTTCGTGCAAGTGACATGGGTTTGGGGCCGAAAAGGCGGTTGACTATAGATTATGATGGGAATTTGAGACTTTATAGTCTCAATTCAACAGGGTTTTGGGTGGTGACTTGGGAAGCTCTCATTCAGAGGTGTAGGGTTCATGGGATTTGTGGGAGAAATGGGATTTGTGTTTATACACCAGAGCCCAAATGTTCATGTCCTCCTGGCTATGAGGTGTTGGATAAAACTAACTGGAACAAAGGTTGCATCCCTAAGTTCAACCTTACATGCTCAGAGCCAGTGAAATTCCTTAAGATTCCAAATGTGGACTTCTTTGGATTTGATCTCAAATTCATGGAGTCCATTAGCTTTAGCGCTTGCAGAAAACTCTGCGTAGATGATTGCCGGTGTCAAGCATTTCGTTACAAGCTAGCAGAAAAATCTACGACGACTCTGTGTTACACAAAAAATGCTCTTTTCAATGGGCACAAGTCTCCGTTTTACCCGGGCAGCTTATACTTCAAACTACCTCTTAATGTGGATACATCGCTACCTGCCAAGCTCAGTGTGACTGGTTCATGCATGAACAATGAGACCATGGCTGTGGTAGTAGGTTCTGCTTCAATTGAAACTGGACCGTTGCCTTGTTGGATTACCCGGAAAATGAGGTTGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

472

Amino Acids

53.21

Weight (kDa)

8.68

Isoelectric Point (pI)

30.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 86 - 173 2.9e-21 D-mannose binding lectin
S_locus_glycop PF00954 266 - 325 3.7e-09 S-locus glycoprotein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 699
AasI GACNNNNNNGTC 1 cut(s) 837
Acc36I ACCTGC 1 cut(s) 1303
AccB1I GGYRCC 1 cut(s) 206
AccB7I CCANNNNNTGG 1 cut(s) 662
AciI CCGC 2 cut(s) 760, 799
AcoI YGGCCR 2 cut(s) 270, 653
AcsI RAATTY 6 cut(s) 34, 424, 462, 823, 1046, 1091
AdeI CACNNNGTG 1 cut(s) 458
AfeI AGCGCT 1 cut(s) 1117
AfiI CCNNNNNNNGG 5 cut(s) 246, 247, 264, 293, 662
AflII CTTAAG 1 cut(s) 1052
AflIII ACRYGT 1 cut(s) 185
AgeI ACCGGT 1 cut(s) 286
AgsI TTSAA 8 cut(s) 424, 642, 849, 1021, 1222, 1264, 1365, 1370
AjnI CCWGG 3 cut(s) 245, 661, 964
AjuI GAANNNNNNNTTGG 5 cut(s) 25, 57, 247, 279, 1394
AluBI AGCT 8 cut(s) 20, 418, 477, 878, 1110, 1171, 1254, 1303
AluI AGCT 8 cut(s) 20, 418, 477, 878, 1110, 1171, 1254, 1303
Alw26I GTCTC 6 cut(s) 375, 544, 823, 845, 1239, 1328
Ama87I CYCGRG 2 cut(s) 321, 1246
Aor51HI AGCGCT 1 cut(s) 1117
AoxI GGCC 4 cut(s) 270, 448, 653, 788
ApaI GGGCCC 1 cut(s) 452
ApeKI GCWGC 1 cut(s) 1251
ApoI RAATTY 6 cut(s) 34, 424, 462, 823, 1046, 1091
AsiGI ACCGGT 1 cut(s) 286
AspLEI GCGC 1 cut(s) 1118
AspS9I GGNCC 5 cut(s) 448, 449, 629, 788, 1376
AsuC2I CCSGG 3 cut(s) 1247, 1248, 1399
AsuHPI GGTGA 4 cut(s) 5, 229, 470, 877
AsuNHI GCTAGC 1 cut(s) 1171
AvaI CYCGRG 2 cut(s) 321, 1246
AvaII GGWCC 2 cut(s) 629, 1376
BaeGI GKGCMC 2 cut(s) 452, 1230
BalI TGGCCA 2 cut(s) 272, 655
BanI GGYRCC 1 cut(s) 206
BanII GRGCYC 3 cut(s) 305, 452, 948
BbvI GCAGC 1 cut(s) 1263
BccI CCATC 6 cut(s) 236, 262, 320, 347, 620, 812
BciT130I CCWGG 3 cut(s) 247, 663, 966
BciVI GTATCC 1 cut(s) 1276
BclI TGATCA 1 cut(s) 10
BcnI CCSGG 3 cut(s) 1247, 1248, 1399
BcoDI GTCTC 6 cut(s) 375, 544, 823, 845, 1239, 1328
BfaI CTAG 1 cut(s) 1172
BfmI CTRYAG 1 cut(s) 807
BfoI RGCGCY 1 cut(s) 1119
BfrI CTTAAG 1 cut(s) 1052
BfuAI ACCTGC 1 cut(s) 1303
BfuI GTATCC 1 cut(s) 1276
BglI GCCNNNNNGGC 1 cut(s) 796
BisI GCNGC 1 cut(s) 1252
BlpI GCTNAGC 1 cut(s) 414
BlsI GCNGC 1 cut(s) 1253
Bme1390I CCNGG 6 cut(s) 247, 663, 966, 1247, 1248, 1399
Bme18I GGWCC 2 cut(s) 629, 1376
BmeT110I CYCGRG 2 cut(s) 321, 1246
BmgT120I GGNCC 5 cut(s) 448, 449, 629, 788, 1376
BmiI GGNNCC 5 cut(s) 208, 304, 449, 450, 789
BmrFI CCNGG 6 cut(s) 247, 663, 966, 1247, 1248, 1399
BmsI GCATC 1 cut(s) 1017
BmtI GCTAGC 1 cut(s) 1175
BpmI CTGGAG 2 cut(s) 229, 289
Bpu1102I GCTNAGC 1 cut(s) 414
BpuMI CCSGG 3 cut(s) 1247, 1248, 1399
BsaI GGTCTC 3 cut(s) 375, 544, 1328
BsaJI CCNNGG 4 cut(s) 246, 522, 1246, 1338
BsaWI WCCGGW 1 cut(s) 286
BsaXI ACNNNNNCTCC 2 cut(s) 209, 239
Bsc4I CCNNNNNNNGG 5 cut(s) 246, 247, 264, 293, 662
Bse118I RCCGGY 2 cut(s) 286, 1146
Bse1I ACTGG 6 cut(s) 224, 747, 998, 1040, 1318, 1378
BseBI CCWGG 3 cut(s) 247, 663, 966
BseDI CCNNGG 4 cut(s) 246, 522, 1246, 1338
BseGI GGATG 4 cut(s) 26, 273, 358, 1008
BseLI CCNNNNNNNGG 5 cut(s) 246, 247, 264, 293, 662
BseMII CTCAG 4 cut(s) 147, 405, 1047, 1318
BseNI ACTGG 6 cut(s) 224, 747, 998, 1040, 1318, 1378
BseSI GKGCMC 2 cut(s) 452, 1230
BseXI GCAGC 1 cut(s) 1263
Bsh1285I CGRYCG 1 cut(s) 287
BshFI GGCC 4 cut(s) 272, 450, 655, 790
BshNI GGYRCC 1 cut(s) 206
BshTI ACCGGT 1 cut(s) 286
BsiEI CGRYCG 1 cut(s) 287
BsiHKCI CYCGRG 2 cut(s) 321, 1246
BsiSI CCGG 4 cut(s) 287, 1147, 1247, 1399
BslFI GGGAC 1 cut(s) 263
BslI CCNNNNNNNGG 5 cut(s) 246, 247, 264, 293, 662
BsmAI GTCTC 6 cut(s) 375, 544, 823, 845, 1239, 1328
BsmFI GGGAC 1 cut(s) 263
BsnI GGCC 4 cut(s) 272, 450, 655, 790
Bso31I GGTCTC 3 cut(s) 375, 544, 1328
BsoBI CYCGRG 2 cut(s) 321, 1246
Bsp120I GGGCCC 1 cut(s) 448
Bsp1286I GDGCHC 4 cut(s) 305, 452, 948, 1230
Bsp143I GATC 3 cut(s) 10, 751, 1084
Bsp1720I GCTNAGC 1 cut(s) 414
Bsp19I CCATGG 1 cut(s) 1338
BspACI CCGC 2 cut(s) 760, 799
BspANI GGCC 4 cut(s) 272, 450, 655, 790
BspCNI CTCAG 4 cut(s) 146, 406, 1046, 1317
BspLI GGNNCC 5 cut(s) 208, 304, 449, 450, 789
BspMI ACCTGC 1 cut(s) 1303
BspOI GCTAGC 1 cut(s) 1175
BspQI GCTCTTC 1 cut(s) 130
BspT107I GGYRCC 1 cut(s) 206
BspTI CTTAAG 1 cut(s) 1052
BspTNI GGTCTC 3 cut(s) 375, 544, 1328
BsrFI RCCGGY 2 cut(s) 286, 1146
BsrI ACTGG 6 cut(s) 224, 747, 998, 1040, 1318, 1378
BssAI RCCGGY 2 cut(s) 286, 1146
BssECI CCNNGG 4 cut(s) 246, 522, 1246, 1338
BssMI GATC 3 cut(s) 10, 751, 1084
BssT1I CCWWGG 2 cut(s) 522, 1338
Bst2UI CCWGG 3 cut(s) 247, 663, 966
Bst4CI ACNGT 4 cut(s) 70, 259, 704, 1380
Bst6I CTCTTC 4 cut(s) 88, 110, 130, 504
BstAFI CTTAAG 1 cut(s) 1052
BstC8I GCNNGC 3 cut(s) 359, 1120, 1173
BstDEI CTNAG 5 cut(s) 133, 414, 1014, 1033, 1304
BstDSI CCRYGG 1 cut(s) 1338
BstF5I GGATG 4 cut(s) 26, 273, 358, 1008
BstH2I RGCGCY 1 cut(s) 1119
BstHHI GCGC 1 cut(s) 1118
BstKTI GATC 3 cut(s) 13, 754, 1087
BstMAI GTCTC 6 cut(s) 375, 544, 823, 845, 1239, 1328
BstMBI GATC 3 cut(s) 10, 751, 1084
BstMCI CGRYCG 1 cut(s) 287
BstMWI GCNNNNNNNGC 3 cut(s) 401, 410, 796
BstNI CCWGG 3 cut(s) 247, 663, 966
BstNSI RCATGY 3 cut(s) 189, 361, 1032
BstSCI CCNGG 6 cut(s) 245, 661, 964, 1245, 1246, 1397
BstSFI CTRYAG 1 cut(s) 807
BstSLI GKGCMC 2 cut(s) 452, 1230
BstV1I GCAGC 1 cut(s) 1263
BstXI CCANNNNNNTGG 1 cut(s) 1345
BsuI GTATCC 1 cut(s) 1276
BsuRI GGCC 4 cut(s) 272, 450, 655, 790
BtgI CCRYGG 1 cut(s) 1338
BtgZI GCGATG 1 cut(s) 1272
BtsCI GGATG 4 cut(s) 26, 273, 358, 1008
BtsIMutI CAGTG 6 cut(s) 66, 141, 314, 754, 1047, 1312
BveI ACCTGC 1 cut(s) 1303
Cac8I GCNNGC 3 cut(s) 359, 1120, 1173
CfoI GCGC 1 cut(s) 1118
Cfr10I RCCGGY 2 cut(s) 286, 1146
Cfr13I GGNCC 5 cut(s) 448, 449, 629, 788, 1376
Cfr9I CCCGGG 1 cut(s) 1246
CspAI ACCGGT 1 cut(s) 286
DdeI CTNAG 5 cut(s) 133, 414, 1014, 1033, 1304
DpnI GATC 3 cut(s) 12, 753, 1086
DpnII GATC 3 cut(s) 10, 751, 1084
DraIII CACNNNGTG 1 cut(s) 458
DrdI GACNNNNNNGTC 1 cut(s) 837
DseDI GACNNNNNNGTC 1 cut(s) 837
EaeI YGGCCR 2 cut(s) 270, 653
Eam1104I CTCTTC 4 cut(s) 88, 110, 130, 504
EarI CTCTTC 4 cut(s) 88, 110, 130, 504
Eco130I CCWWGG 2 cut(s) 522, 1338
Eco24I GRGCYC 3 cut(s) 305, 452, 948
Eco31I GGTCTC 3 cut(s) 375, 544, 1328
Eco47I GGWCC 2 cut(s) 629, 1376
Eco47III AGCGCT 1 cut(s) 1117
Eco88I CYCGRG 2 cut(s) 321, 1246
EcoO109I RGGNCCY 1 cut(s) 448
EcoRI GAATTC 1 cut(s) 424
EcoRII CCWGG 3 cut(s) 245, 661, 964
EcoT14I CCWWGG 2 cut(s) 522, 1338
EcoT22I ATGCAT 1 cut(s) 1325
EcoT38I GRGCYC 3 cut(s) 305, 452, 948
ErhI CCWWGG 2 cut(s) 522, 1338
FalI AAGNNNNNCTT 2 cut(s) 109, 141
FaqI GGGAC 1 cut(s) 263
FbaI TGATCA 1 cut(s) 10
Fnu4HI GCNGC 1 cut(s) 1252
FokI GGATG 4 cut(s) 13, 280, 365, 995
FriOI GRGCYC 3 cut(s) 305, 452, 948
Fsp4HI GCNGC 1 cut(s) 1252
FspBI CTAG 1 cut(s) 1172
GlaI GCGC 1 cut(s) 1117
GluI GCNGC 1 cut(s) 1252
GsuI CTGGAG 2 cut(s) 229, 289
HaeII RGCGCY 1 cut(s) 1119
HaeIII GGCC 4 cut(s) 272, 450, 655, 790
HapII CCGG 4 cut(s) 287, 1147, 1247, 1399
HhaI GCGC 1 cut(s) 1118
Hin6I GCGC 1 cut(s) 1116
HinP1I GCGC 1 cut(s) 1116
HincII GTYRAC 1 cut(s) 804
HindII GTYRAC 1 cut(s) 804
HindIII AAGCTT 1 cut(s) 475
HinfI GANTC 3 cut(s) 1057, 1100, 1192
HpaII CCGG 4 cut(s) 287, 1147, 1247, 1399
HphI GGTGA 4 cut(s) 5, 229, 470, 877
Hpy166II GTNNAC 3 cut(s) 237, 804, 1069
Hpy188I TCNGA 3 cut(s) 154, 888, 1036
Hpy188III TCNNGA 5 cut(s) 160, 306, 340, 374, 632
Hpy8I GTNNAC 3 cut(s) 237, 804, 1069
Hpy99I CGWCG 1 cut(s) 1192
HpyAV CCTTC 1 cut(s) 51
HpyCH4III ACNGT 4 cut(s) 70, 259, 704, 1380
HpyCH4V TGCA 7 cut(s) 89, 95, 361, 770, 1008, 1122, 1323
HpyF10VI GCNNNNNNNGC 3 cut(s) 401, 410, 796
HpyF3I CTNAG 5 cut(s) 133, 414, 1014, 1033, 1304
HspAI GCGC 1 cut(s) 1116
Ksp22I TGATCA 1 cut(s) 10
Kzo9I GATC 3 cut(s) 10, 751, 1084
LguI GCTCTTC 1 cut(s) 130
LmnI GCTCC 1 cut(s) 308
Lsp1109I GCAGC 1 cut(s) 1263
LweI GCATC 1 cut(s) 1017
MaeI CTAG 1 cut(s) 1172
MaeIII GTNAC 6 cut(s) 560, 773, 865, 1163, 1199, 1309
MalI GATC 3 cut(s) 12, 753, 1086
MboI GATC 3 cut(s) 10, 751, 1084
MboII GAAGA 4 cut(s) 75, 97, 117, 491
MfeI CAATTG 1 cut(s) 1365
MhlI GDGCHC 4 cut(s) 305, 452, 948, 1230
MlsI TGGCCA 2 cut(s) 272, 655
MluNI TGGCCA 2 cut(s) 272, 655
MlyI GAGTC 2 cut(s) 1109, 1186
MmeI TCCRAC 3 cut(s) 960, 1370, 1392
Mox20I TGGCCA 2 cut(s) 272, 655
Mph1103I ATGCAT 1 cut(s) 1325
MscI TGGCCA 2 cut(s) 272, 655
MseI TTAA 2 cut(s) 1053, 1275
MslI CAYNNNNRTG 2 cut(s) 68, 1343
Msp20I TGGCCA 2 cut(s) 272, 655
MspCI CTTAAG 1 cut(s) 1052
MspI CCGG 4 cut(s) 287, 1147, 1247, 1399
MspR9I CCNGG 6 cut(s) 247, 663, 966, 1247, 1248, 1399
MunI CAATTG 1 cut(s) 1365
MvaI CCWGG 3 cut(s) 247, 663, 966
MwoI GCNNNNNNNGC 3 cut(s) 401, 410, 796
NciI CCSGG 3 cut(s) 1247, 1248, 1399
NcoI CCATGG 1 cut(s) 1338
NdeII GATC 3 cut(s) 10, 751, 1084
NheI GCTAGC 1 cut(s) 1171
NlaIV GGNNCC 5 cut(s) 208, 304, 449, 450, 789
NmuCI GTSAC 3 cut(s) 773, 865, 1309
NsiI ATGCAT 1 cut(s) 1325
NspI RCATGY 3 cut(s) 189, 361, 1032
PaeI GCATGC 1 cut(s) 361
PciI ACATGT 1 cut(s) 185
PciSI GCTCTTC 1 cut(s) 130
PfeI GAWTC 1 cut(s) 1057
PflMI CCANNNNNTGG 1 cut(s) 662
PinAI ACCGGT 1 cut(s) 286
PkrI GCNGC 1 cut(s) 1253
PleI GAGTC 2 cut(s) 1108, 1186
PpsI GAGTC 2 cut(s) 1108, 1186
PscI ACATGT 1 cut(s) 185
PsiI TTATAA 1 cut(s) 699
Psp6I CCWGG 3 cut(s) 245, 661, 964
PspGI CCWGG 3 cut(s) 245, 661, 964
PspN4I GGNNCC 5 cut(s) 208, 304, 449, 450, 789
PspOMI GGGCCC 1 cut(s) 448
PspPI GGNCC 5 cut(s) 448, 449, 629, 788, 1376
RseI CAYNNNNRTG 2 cut(s) 68, 1343
SapI GCTCTTC 1 cut(s) 130
SaqAI TTAA 2 cut(s) 1053, 1275
SatI GCNGC 1 cut(s) 1252
Sau3AI GATC 3 cut(s) 10, 751, 1084
Sau96I GGNCC 5 cut(s) 448, 449, 629, 788, 1376
SchI GAGTC 2 cut(s) 1109, 1186
ScrFI CCNGG 6 cut(s) 247, 663, 966, 1247, 1248, 1399
SduI GDGCHC 4 cut(s) 305, 452, 948, 1230
SfaNI GCATC 1 cut(s) 1017
SfcI CTRYAG 1 cut(s) 807
SinI GGWCC 2 cut(s) 629, 1376
SmaI CCCGGG 1 cut(s) 1248
SmiMI CAYNNNNRTG 2 cut(s) 68, 1343
SmlI CTYRAG 1 cut(s) 1052
SmoI CTYRAG 1 cut(s) 1052
SphI GCATGC 1 cut(s) 361
SsiI CCGC 2 cut(s) 760, 799
SspMI CTAG 1 cut(s) 1172
StyD4I CCNGG 6 cut(s) 245, 661, 964, 1245, 1246, 1397
StyI CCWWGG 2 cut(s) 522, 1338
TaaI ACNGT 4 cut(s) 70, 259, 704, 1380
TfiI GAWTC 1 cut(s) 1057
Tru1I TTAA 2 cut(s) 1053, 1275
Tru9I TTAA 2 cut(s) 1053, 1275
TscAI CASTG 6 cut(s) 73, 141, 321, 754, 1047, 1312
TseFI GTSAC 3 cut(s) 773, 865, 1309
TseI GCWGC 1 cut(s) 1251
Tsp45I GTSAC 3 cut(s) 773, 865, 1309
TspDTI ATGAA 8 cut(s) 15, 52, 545, 890, 945, 1084, 1308, 1340
TspGWI ACGGA 1 cut(s) 1227
TspMI CCCGGG 1 cut(s) 1246
TspRI CASTG 6 cut(s) 73, 141, 321, 754, 1047, 1312
Van91I CCANNNNNTGG 1 cut(s) 662
Vha464I CTTAAG 1 cut(s) 1052
VpaK11BI GGWCC 2 cut(s) 629, 1376
XapI RAATTY 6 cut(s) 34, 424, 462, 823, 1046, 1091
XceI RCATGY 3 cut(s) 189, 361, 1032
XmaI CCCGGG 1 cut(s) 1246
XspI CTAG 1 cut(s) 1172
Zsp2I ATGCAT 1 cut(s) 1325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.