RchiOBHm_Chr6g0308601

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000166
Physical Location & Seq
Forward (+)
66644388 .. 66646859
2472 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27750

Sequence Viewer

Length: 2472 bp
ATGATATGGTCTATATTTAGAAGTGGCTGTTGCTGGTACGAATACTCTTGGATCATGGCTGCTCTGTTTCACATTCTTCTTCTTTTTCTTGCAATTTATTTCCGAATCTCATCTTCAACGTCCGACACTGCGAATAAAGGCTCATCCCTATCTGTAGAGAAACCAGACGATGTGTTAACTTCACCGGATGGAGTTTTCACCGCCGGGTTTCACCAAGTCGGCAACAATTCATTTTGCTTTGCTATTTGGTTCAGTGAGCCATTTGACCACTACAAAAACAGAACCATAGTCTGGATGGCCAACCGTGGCCAACCAGTCAATGGAAAACACTCAAAGCTCTCCCTCCTTAAAACTGGTGATCTCATCTTAACCGACGCTGGTCAATCCATTGTTTGGTCCACAGCCACCACTTCAGTCTCTCCGGCGAACTTAAGCCTCCACAATTCCGGCAATCTTGTTTTGCTCAACTCGGAGCATGTCATTCTATGGCAGAGCTTTGATTACCCTACTGATACTCTTCTTCCAGACCAACCACTCACCAGAAGCACAATCCTTGTCTCCATGAGAAGCCCGAGCAACCACTCATCTGGCTTCTACAAGCTCTTCTTTGACAATGACAACCTTCTCCGGCTACTCTTCGACGGTCTTGAGATTTCAAGTTTGTATTGGTTTGAGCCGTGGCTCACAGGCCAAGAAGCAGGAAGGTCCAAAGACAACAACAGTAGAGTTGCCGTGATGGATTCCTTAGGCAAGTTTACTTCATCAGACAAATATACTTTGATCGCTTCTGATTGTGGTGTAGCTTCGCAAAGAAGACTGACTGTTGATTGTGATGGAAATGTTCGGTTGCACAGCCGGACCAAACCCGGAGACAGATGGGTTGTGACAGGGCAGATCATGGAAAATGCTTGTATGATTCATGGGGTTTGTGGTCCTAATAGTGTGTGTGACTATGAGCCTAGTACTGGAAGAAAATGTTCTTGCATTCCTGGTTACAAAATGGCAAACTATACTGATTGGTATTATGGTTGTGAACCTGAGTTCAATTACACTTGCGGCAGAGGTGAGTCCAGTTTCTTCAAGCTTTCGAGGCTCGACTTTTACGGGTATGATTACGGATTCTTCCCCAACTACACATTTATGCAGTGTGAGGATCTCTGTTTGCAGCTGTGTAACTGCAAGGGTTTCCAATACTCTCTCCGCGATAAATACTCTCCAAACTCCAGCAGTGGAATATATGGCTGTTATCCGAAAATGGTGTTGCTCAATGGATACAGGACTCCAAGCTCTTCTAAAGACACATATTTGAGAGTGCCAAAGATCCATATGTCATCTTATGGATTGCCACAAGAAGAGTATAGGTTGCGTTGCATAGATAAGGTAGTTGAGCTAGATAGGAGCTATGAGAAGAGCCATGTAACTGGTCTAGAGAAATTTTGGCTGTGGTTTGCCTGTGGAGTTGGAGGGTTTGAGATCATTTGTATACTTTTGGTTTTGGGTTTAATAACTCAAAATCGGAGAGATTCCAATGAGGATAAGCACGGCTACCTTCTTGCTGCAACTGGATTCAAGAGGTTTAGCTACTCTGAGCTTAGGAAGGCAACAAGGGGTTTTAGTGAAGAAATTGGAAGAGGAGCAGGAGGTGTTGTTTACAAAGCTATGTTGGCTGATCATCGAGTTGCAGCGATCAAGAGGCTTAATGAAACCAACCAAGGAGAAGGTGAGTTTTCAGCAGAAGTCAACACTATTGGGAGGCTGAACCATATGCATTTGATTGAGATGTGGGGATATTGCTCGGAGGGAAAGCACAGGCTTCTTGTTTATGAGTACATGGAGCATGGTTCCTTGGCACAAAAGTTAGCTTCCAATGTCCTTGATTGGGAAAAGAGGTTTGAGATTGCTCTAGGCACTGCAAAGGGTCTTGCTTATTTGCATGAAGAATGTTTGGAGTGGGTTTTACATTGTGATGTTAAGCCTCAAAACATACTCTTGGACTCCAATTATCAACCAAAGGTTGCAGATTTTGGCCTATCCAAGCTCCTCAACAGAGATGACCTTAAGAACTGGAGCTTTTCGAGGATACGAGGAACTAGAGGTTACATTGCTCCGGAGTGGGTTTACAATTTACCTATCACATCCAAAGTGGATGTGTACAGCTATGGGGTTGTGGTGTTGGAGATGGTGACCGGAATGAACCCGATTAAGCCGGATGTGGATGCCAATGATGGTGAGCAGAGAAGGCTGATCATGTGGGTGAGGGAGAAATTACATAATGGAACTTCTGCTAGTGAAATTGAAGCTCGGATAGGAGACGTCATAGACCCTTCGTTTGAAGGTAAATATGATGTAAAAAAGATGGGGATTCTTTTGGGAGTGGCTTTACATTGCGTAGAGGAAGACAGAGACGTGAGACCAACTATGAGCCAAGTCGTTGAGATGCTTGTGATGCTTGACAAAGACCAAGAGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

823

Amino Acids

93.38

Weight (kDa)

6.15

Isoelectric Point (pI)

40.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 95 - 181 1.4e-23 D-mannose binding lectin
S_locus_glycop PF00954 269 - 334 1.7e-07 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 538 - 812 9.3e-38 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 539 - 812 6e-49 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2316
AccB7I CCANNNNNTGG 3 cut(s) 291, 320, 393
AccI GTMKAC 1 cut(s) 1483
AccII CGCG 1 cut(s) 1203
AccIII TCCGGA 1 cut(s) 2107
AciI CCGC 3 cut(s) 201, 1056, 1201
AclWI GGATC 3 cut(s) 59, 1161, 1315
AcoI YGGCCR 2 cut(s) 297, 307
AcsI RAATTY 1 cut(s) 1433
AcuI CTGAAG 1 cut(s) 396
AcyI GRCGYC 1 cut(s) 2313
AfaI GTAC 4 cut(s) 38, 964, 1829, 2153
AfiI CCNNNNNNNGG 5 cut(s) 291, 320, 393, 965, 1879
AflII CTTAAG 2 cut(s) 430, 2057
AgsI TTSAA 7 cut(s) 117, 657, 1045, 1081, 1570, 2297, 2333
AjiI CACGTC 1 cut(s) 2407
AjnI CCWGG 1 cut(s) 988
Alw26I GTCTC 6 cut(s) 421, 562, 864, 2304, 2397, 2404
AlwI GGATC 3 cut(s) 59, 1161, 1315
Ama87I CYCGRG 1 cut(s) 571
Aor13HI TCCGGA 1 cut(s) 2107
AoxI GGCC 4 cut(s) 297, 307, 688, 2026
ApeKI GCWGC 4 cut(s) 59, 1165, 1556, 1682
ApoI RAATTY 1 cut(s) 1433
ArsI GACNNNNNNTTYG 2 cut(s) 2312, 2344
Asp700I GAANNNNTTC 1 cut(s) 976
AspS9I GGNCC 4 cut(s) 396, 705, 858, 932
AsuC2I CCSGG 2 cut(s) 205, 867
AvaI CYCGRG 1 cut(s) 571
AvaII GGWCC 4 cut(s) 396, 705, 858, 932
AxyI CCTNAGG 1 cut(s) 745
BalI TGGCCA 2 cut(s) 299, 309
BbsI GAAGAC 2 cut(s) 820, 2403
BbvI GCAGC 4 cut(s) 46, 1177, 1543, 1694
BccI CCATC 8 cut(s) 182, 289, 730, 827, 870, 2173, 2219, 2350
BceAI ACGGC 3 cut(s) 661, 716, 1558
BciT130I CCWGG 1 cut(s) 990
BciVI GTATCC 2 cut(s) 1265, 2073
BclI TGATCA 2 cut(s) 1669, 2244
BcnI CCSGG 2 cut(s) 205, 867
BcoDI GTCTC 6 cut(s) 421, 562, 864, 2304, 2397, 2404
BfaI CTAG 6 cut(s) 960, 1391, 1427, 1904, 2091, 2286
BfmI CTRYAG 1 cut(s) 153
BfrI CTTAAG 2 cut(s) 430, 2057
BfuI GTATCC 2 cut(s) 1265, 2073
BisI GCNGC 5 cut(s) 60, 1057, 1166, 1557, 1683
BlsI GCNGC 5 cut(s) 61, 1058, 1167, 1558, 1684
BmcAI AGTACT 1 cut(s) 964
Bme1390I CCNGG 3 cut(s) 205, 867, 990
Bme18I GGWCC 4 cut(s) 396, 705, 858, 932
BmeT110I CYCGRG 1 cut(s) 571
BmgBI CACGTC 1 cut(s) 2407
BmgT120I GGNCC 4 cut(s) 396, 705, 858, 932
BmiI GGNNCC 1 cut(s) 1843
BmrFI CCNGG 3 cut(s) 205, 867, 990
BmsI GCATC 3 cut(s) 2206, 2427, 2436
BoxI GACNNNNGTC 1 cut(s) 378
BpiI GAAGAC 2 cut(s) 820, 2403
BpmI CTGGAG 2 cut(s) 1207, 2086
Bpu10I CCTNAGC 1 cut(s) 1592
BpuEI CTTGAG 1 cut(s) 668
BpuMI CCSGG 2 cut(s) 205, 867
BsaHI GRCGYC 1 cut(s) 2313
BsaI GGTCTC 1 cut(s) 2404
BsaJI CCNNGG 4 cut(s) 304, 677, 1711, 1845
BsaWI WCCGGW 3 cut(s) 184, 2107, 2186
BsaXI ACNNNNNCTCC 2 cut(s) 1632, 1662
Bsc4I CCNNNNNNNGG 5 cut(s) 291, 320, 393, 965, 1879
Bse1I ACTGG 7 cut(s) 314, 358, 970, 1071, 1426, 1567, 2069
Bse21I CCTNAGG 1 cut(s) 745
Bse3DI GCAATG 2 cut(s) 2100, 2383
BseAI TCCGGA 1 cut(s) 2107
BseBI CCWGG 1 cut(s) 990
BseDI CCNNGG 4 cut(s) 304, 677, 1711, 1845
BseGI GGATG 7 cut(s) 143, 193, 300, 2135, 2152, 2215, 2221
BseLI CCNNNNNNNGG 5 cut(s) 291, 320, 393, 965, 1879
BseMI GCAATG 2 cut(s) 2100, 2383
BseMII CTCAG 2 cut(s) 1029, 1578
BseNI ACTGG 7 cut(s) 314, 358, 970, 1071, 1426, 1567, 2069
BseRI GAGGAG 2 cut(s) 1647, 2030
BseXI GCAGC 4 cut(s) 46, 1177, 1543, 1694
Bsh1236I CGCG 1 cut(s) 1203
BshFI GGCC 4 cut(s) 299, 309, 690, 2028
BsiHKCI CYCGRG 1 cut(s) 571
BslI CCNNNNNNNGG 5 cut(s) 291, 320, 393, 965, 1879
BsmAI GTCTC 6 cut(s) 421, 562, 864, 2304, 2397, 2404
BsmBI CGTCTC 2 cut(s) 2304, 2397
BsmI GAATGC 1 cut(s) 984
BsnI GGCC 4 cut(s) 299, 309, 690, 2028
Bso31I GGTCTC 1 cut(s) 2404
BsoBI CYCGRG 1 cut(s) 571
Bsp13I TCCGGA 1 cut(s) 2107
Bsp1407I TGTACA 1 cut(s) 2151
BspACI CCGC 3 cut(s) 201, 1056, 1201
BspANI GGCC 4 cut(s) 299, 309, 690, 2028
BspCNI CTCAG 2 cut(s) 1030, 1579
BspEI TCCGGA 1 cut(s) 2107
BspFNI CGCG 1 cut(s) 1203
BspLI GGNNCC 1 cut(s) 1843
BspPI GGATC 3 cut(s) 59, 1161, 1315
BspQI GCTCTTC 3 cut(s) 608, 1294, 1403
BspTI CTTAAG 2 cut(s) 430, 2057
BspTNI GGTCTC 1 cut(s) 2404
BsrDI GCAATG 2 cut(s) 2100, 2383
BsrGI TGTACA 1 cut(s) 2151
BsrI ACTGG 7 cut(s) 314, 358, 970, 1071, 1426, 1567, 2069
BssECI CCNNGG 4 cut(s) 304, 677, 1711, 1845
BssNAI GTATAC 1 cut(s) 1484
BssNI GRCGYC 1 cut(s) 2313
BssT1I CCWWGG 2 cut(s) 1711, 1845
Bst1107I GTATAC 1 cut(s) 1484
Bst2UI CCWGG 1 cut(s) 990
Bst4CI ACNGT 4 cut(s) 305, 644, 722, 823
Bst6I CTCTTC 7 cut(s) 522, 608, 641, 1294, 1347, 1403, 1624
BstACI GRCGYC 1 cut(s) 2313
BstAFI CTTAAG 2 cut(s) 430, 2057
BstAUI TGTACA 1 cut(s) 2151
BstDEI CTNAG 4 cut(s) 745, 1038, 1587, 1592
BstDSI CCRYGG 2 cut(s) 304, 677
BstEII GGTNACC 1 cut(s) 2182
BstF5I GGATG 7 cut(s) 143, 193, 300, 2135, 2152, 2215, 2221
BstFNI CGCG 1 cut(s) 1203
BstMAI GTCTC 6 cut(s) 421, 562, 864, 2304, 2397, 2404
BstMWI GCNNNNNNNGC 4 cut(s) 1090, 1664, 2239, 2446
BstNI CCWGG 1 cut(s) 990
BstNSI RCATGY 1 cut(s) 479
BstPAI GACNNNNGTC 1 cut(s) 378
BstPI GGTNACC 1 cut(s) 2182
BstSCI CCNGG 3 cut(s) 203, 865, 988
BstSFI CTRYAG 1 cut(s) 153
BstUI CGCG 1 cut(s) 1203
BstV1I GCAGC 4 cut(s) 46, 1177, 1543, 1694
BstV2I GAAGAC 2 cut(s) 820, 2403
BstX2I RGATCY 2 cut(s) 1153, 1320
BstXI CCANNNNNNTGG 2 cut(s) 587, 1421
BstYI RGATCY 2 cut(s) 1153, 1320
BstZ17I GTATAC 1 cut(s) 1484
Bsu36I CCTNAGG 1 cut(s) 745
BsuI GTATCC 2 cut(s) 1265, 2073
BsuRI GGCC 4 cut(s) 299, 309, 690, 2028
BtgI CCRYGG 2 cut(s) 304, 677
BtrI CACGTC 1 cut(s) 2407
BtsCI GGATG 7 cut(s) 143, 193, 300, 2135, 2152, 2215, 2221
BtsI GCAGTG 4 cut(s) 126, 1151, 1234, 1908
BtsIMutI CAGTG 5 cut(s) 126, 259, 1151, 1234, 1908
Cfr13I GGNCC 4 cut(s) 396, 705, 858, 932
CseI GACGC 1 cut(s) 383
Csp6I GTAC 4 cut(s) 37, 963, 1828, 2152
CviQI GTAC 4 cut(s) 37, 963, 1828, 2152
DdeI CTNAG 4 cut(s) 745, 1038, 1587, 1592
EaeI YGGCCR 2 cut(s) 297, 307
Eam1104I CTCTTC 7 cut(s) 522, 608, 641, 1294, 1347, 1403, 1624
EarI CTCTTC 7 cut(s) 522, 608, 641, 1294, 1347, 1403, 1624
Eco130I CCWWGG 2 cut(s) 1711, 1845
Eco31I GGTCTC 1 cut(s) 2404
Eco47I GGWCC 4 cut(s) 396, 705, 858, 932
Eco57I CTGAAG 1 cut(s) 396
Eco81I CCTNAGG 1 cut(s) 745
Eco88I CYCGRG 1 cut(s) 571
Eco91I GGTNACC 1 cut(s) 2182
EcoO65I GGTNACC 1 cut(s) 2182
EcoRII CCWGG 1 cut(s) 988
EcoT14I CCWWGG 2 cut(s) 1711, 1845
EcoT22I ATGCAT 1 cut(s) 1770
ErhI CCWWGG 2 cut(s) 1711, 1845
Esp3I CGTCTC 2 cut(s) 2304, 2397
FalI AAGNNNNNCTT 2 cut(s) 590, 622
FauNDI CATATG 2 cut(s) 1326, 1764
FbaI TGATCA 2 cut(s) 1669, 2244
FblI GTMKAC 1 cut(s) 1483
Fnu4HI GCNGC 5 cut(s) 60, 1057, 1166, 1557, 1683
FokI GGATG 7 cut(s) 130, 200, 307, 2122, 2159, 2222, 2228
Fsp4HI GCNGC 5 cut(s) 60, 1057, 1166, 1557, 1683
FspBI CTAG 6 cut(s) 960, 1391, 1427, 1904, 2091, 2286
GluI GCNGC 5 cut(s) 60, 1057, 1166, 1557, 1683
GsuI CTGGAG 2 cut(s) 1207, 2086
HaeIII GGCC 4 cut(s) 299, 309, 690, 2028
HgaI GACGC 1 cut(s) 383
Hin1I GRCGYC 1 cut(s) 2313
HincII GTYRAC 2 cut(s) 177, 1741
HindII GTYRAC 2 cut(s) 177, 1741
HindIII AAGCTT 1 cut(s) 1082
HpaI GTTAAC 1 cut(s) 177
Hpy166II GTNNAC 9 cut(s) 177, 399, 756, 1034, 1484, 1651, 1741, 2119, 2152
Hpy188III TCNNGA 7 cut(s) 292, 524, 647, 1427, 1570, 1690, 2108
Hpy8I GTNNAC 9 cut(s) 177, 399, 756, 1034, 1484, 1651, 1741, 2119, 2152
Hpy99I CGWCG 2 cut(s) 377, 644
HpyAV CCTTC 8 cut(s) 632, 696, 1559, 1591, 1712, 2232, 2327, 2334
HpyCH4III ACNGT 4 cut(s) 305, 644, 722, 823
HpyCH4IV ACGT 3 cut(s) 119, 2313, 2406
HpyF10VI GCNNNNNNNGC 4 cut(s) 1090, 1664, 2239, 2446
HpyF3I CTNAG 4 cut(s) 745, 1038, 1587, 1592
HpySE526I ACGT 3 cut(s) 119, 2313, 2406
Hsp92I GRCGYC 1 cut(s) 2313
Kpn2I TCCGGA 1 cut(s) 2107
Ksp22I TGATCA 2 cut(s) 1669, 2244
KspAI GTTAAC 1 cut(s) 177
LguI GCTCTTC 3 cut(s) 608, 1294, 1403
LmnI GCTCC 7 cut(s) 472, 1398, 1634, 1834, 2043, 2067, 2110
Lsp1109I GCAGC 4 cut(s) 46, 1177, 1543, 1694
LweI GCATC 3 cut(s) 2206, 2427, 2436
MaeI CTAG 6 cut(s) 960, 1391, 1427, 1904, 2091, 2286
MaeII ACGT 3 cut(s) 119, 2313, 2406
MaeIII GTNAC 7 cut(s) 883, 947, 992, 1172, 1417, 2096, 2182
MflI RGATCY 2 cut(s) 1153, 1320
MlsI TGGCCA 2 cut(s) 299, 309
MluNI TGGCCA 2 cut(s) 299, 309
MlyI GAGTC 3 cut(s) 1076, 1273, 1988
MmeI TCCRAC 3 cut(s) 147, 1441, 2154
Mox20I TGGCCA 2 cut(s) 299, 309
Mph1103I ATGCAT 1 cut(s) 1770
MroI TCCGGA 1 cut(s) 2107
MroXI GAANNNNTTC 1 cut(s) 976
MscI TGGCCA 2 cut(s) 299, 309
MseI TTAA 9 cut(s) 176, 348, 368, 431, 1502, 1698, 1971, 2058, 2202
MslI CAYNNNNRTG 3 cut(s) 1139, 1965, 2252
Msp20I TGGCCA 2 cut(s) 299, 309
MspA1I CMGCKG 1 cut(s) 1168
MspCI CTTAAG 2 cut(s) 430, 2057
MspR9I CCNGG 3 cut(s) 205, 867, 990
Mva1269I GAATGC 1 cut(s) 984
MvaI CCWGG 1 cut(s) 990
MvnI CGCG 1 cut(s) 1203
MwoI GCNNNNNNNGC 4 cut(s) 1090, 1664, 2239, 2446
NciI CCSGG 2 cut(s) 205, 867
NdeI CATATG 2 cut(s) 1326, 1764
NlaIV GGNNCC 1 cut(s) 1843
NmuCI GTSAC 3 cut(s) 883, 947, 2182
NsiI ATGCAT 1 cut(s) 1770
NspI RCATGY 1 cut(s) 479
PciSI GCTCTTC 3 cut(s) 608, 1294, 1403
PctI GAATGC 1 cut(s) 984
PdmI GAANNNNTTC 1 cut(s) 976
PfeI GAWTC 7 cut(s) 105, 740, 916, 1119, 1523, 1566, 2362
PflMI CCANNNNNTGG 3 cut(s) 291, 320, 393
PkrI GCNGC 5 cut(s) 61, 1058, 1167, 1558, 1684
PleI GAGTC 3 cut(s) 1075, 1273, 1988
PpsI GAGTC 3 cut(s) 1075, 1273, 1988
PshAI GACNNNNGTC 1 cut(s) 378
Psp6I CCWGG 1 cut(s) 988
PspEI GGTNACC 1 cut(s) 2182
PspGI CCWGG 1 cut(s) 988
PspN4I GGNNCC 1 cut(s) 1843
PspPI GGNCC 4 cut(s) 396, 705, 858, 932
PsuI RGATCY 2 cut(s) 1153, 1320
PvuII CAGCTG 1 cut(s) 1168
RsaI GTAC 4 cut(s) 38, 964, 1829, 2153
RsaNI GTAC 4 cut(s) 37, 963, 1828, 2152
RseI CAYNNNNRTG 3 cut(s) 1139, 1965, 2252
SapI GCTCTTC 3 cut(s) 608, 1294, 1403
SaqAI TTAA 9 cut(s) 176, 348, 368, 431, 1502, 1698, 1971, 2058, 2202
SatI GCNGC 5 cut(s) 60, 1057, 1166, 1557, 1683
Sau96I GGNCC 4 cut(s) 396, 705, 858, 932
ScaI AGTACT 1 cut(s) 964
SchI GAGTC 3 cut(s) 1076, 1273, 1988
ScrFI CCNGG 3 cut(s) 205, 867, 990
SfaNI GCATC 3 cut(s) 2206, 2427, 2436
SfcI CTRYAG 1 cut(s) 153
SinI GGWCC 4 cut(s) 396, 705, 858, 932
SmiMI CAYNNNNRTG 3 cut(s) 1139, 1965, 2252
SmlI CTYRAG 3 cut(s) 430, 647, 2057
SmoI CTYRAG 3 cut(s) 430, 647, 2057
SsiI CCGC 3 cut(s) 201, 1056, 1201
SspMI CTAG 6 cut(s) 960, 1391, 1427, 1904, 2091, 2286
StyD4I CCNGG 3 cut(s) 203, 865, 988
StyI CCWWGG 2 cut(s) 1711, 1845
TaaI ACNGT 4 cut(s) 305, 644, 722, 823
TaiI ACGT 3 cut(s) 122, 2316, 2409
TaqI TCGA 5 cut(s) 639, 1088, 1095, 1675, 2075
TatI WGTACW 3 cut(s) 962, 1827, 2151
TauI GCSGC 1 cut(s) 1059
TfiI GAWTC 7 cut(s) 105, 740, 916, 1119, 1523, 1566, 2362
Tru1I TTAA 9 cut(s) 176, 348, 368, 431, 1502, 1698, 1971, 2058, 2202
Tru9I TTAA 9 cut(s) 176, 348, 368, 431, 1502, 1698, 1971, 2058, 2202
TscAI CASTG 5 cut(s) 133, 259, 1151, 1234, 1915
TseFI GTSAC 3 cut(s) 883, 947, 2182
TseI GCWGC 4 cut(s) 59, 1165, 1556, 1682
Tsp45I GTSAC 3 cut(s) 883, 947, 2182
TspDTI ATGAA 6 cut(s) 219, 750, 908, 1716, 1950, 2207
TspGWI ACGGA 1 cut(s) 1131
TspRI CASTG 5 cut(s) 133, 259, 1151, 1234, 1915
Van91I CCANNNNNTGG 3 cut(s) 291, 320, 393
Vha464I CTTAAG 2 cut(s) 430, 2057
VpaK11BI GGWCC 4 cut(s) 396, 705, 858, 932
XapI RAATTY 1 cut(s) 1433
XbaI TCTAGA 1 cut(s) 1426
XceI RCATGY 1 cut(s) 479
XcmI CCANNNNNNNNNTGG 2 cut(s) 292, 317
XmiI GTMKAC 1 cut(s) 1483
XmnI GAANNNNTTC 1 cut(s) 976
XspI CTAG 6 cut(s) 960, 1391, 1427, 1904, 2091, 2286
ZraI GACGTC 1 cut(s) 2314
ZrmI AGTACT 1 cut(s) 964
Zsp2I ATGCAT 1 cut(s) 1770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.