RchiOBHm_Chr7g0195221

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000166
Physical Location & Seq
Forward (+)
13127441 .. 13129858
2418 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17457

Sequence Viewer

Length: 2418 bp
ATGGGGTATGATCACCAAGCTATTTCATCCCCAAATTTCCCTTCTTTTCTTATTTTCTGTTTCATCACTGTGTTTTTCTACTCTTCTGCAACTGCAAAAACCCTCAACACATTACAAAGAGGCTCTTCTCTCTCAGTGAAAAATGATGTATCAGACTTCCTGACTTCCCCGGACAACTCTTTCACATGTGGGTTCTATGGTGTAGGCACCAATGCCTACTGGTTCTCCATCTGGTTCACCCACTCCAGGGACAGAACCGTAATTTGGATGGCCAACAGAAACCGACCCGTTAATGGCTTGGGCTCCAGAACCTCACTGACCCGAGATGGCTCAATGGTCTTGACAGATGTGGATGGCATACAAGTCTGGTCTCCCGACCTCAACTCTACTTCTGCCAACCTTGCTGAAAGGGCTGAGCTATTGAATTCTGGCAACCTTGTTTTGAGGGGCCCACAAGGTGAAATTCTATGGCAAAGCTTTGATTTTCCTACCAATACTCTTCTCCCTAACCAACTATTTACCAAGGGCATGAAGTTGGTCTCTAATTTGTTAGGGAGAGGTAACTTTGGTAGTGGATATTATAGTTTCTATTTTGATAATGACAATGTGTTGAGGCTCATGTATGATGGTCCTGACATTTCAAGTCTTTATTGGCCAAATCCTGGTTATAGTGTGTTTGACAATGGTAGAACAAATTATAACAGTAGCAGAATTGCTGTTTTTGATGATTTGGGTCGTTTTTTGTCCAGTGATCTATGGCGGTTTCGTGCTAGTGACATGGGTTTGGGGCCGAAAAGGCGGTTGACTATAGATTATGATGGGAATTTGAGACTTTATAGTCTCAATTCAACAGGGTTTTGGGCGGTGACTTGGGAAGCTCTCATTCAGAGGTGTAGGGTTCATGGGATTTGTGGGAGAAATGGGATTTGTGTTTATACACCAGAGCCCAAATGTTCATGTCCTCCTGGCTATGAGGTGTTGGATAAAACTAACTGGAACAAAGGTTGCATCCCTAAGTTCAACCTTACATGCTCAGAGCCAGTGAAATTCCTTAAGATTCCAAATGTGGACTTTTTTGGATTTGATCTCAAATTCATGGAGTCCATTACCTTTAGCGCTTGCAGAAAACTCTGCGTAGATGATTGCCGGTGTCAAGCATTTCGTTACAAGCTAGCAGAAAAATCTACGACGACTCTGTGTTACACAAAAAATGCTCTTTTCAATGGGCACAAGTCTCCGTTTTACCCGGGCAGCTTATACTTCAAACTACCTCTTCATGTGGATACATCACTACCTGCCAAGCTCAGTGTGACTGGTTCATGCATGGACAATGAGACCATGGCTGTGGTAGTAGGTTCTGCTTCAATGTATGACAAGAAAACTAAAAGGATGAGATGGGTGTATCTGTATTCTTTTGCTTCTGCAGTTGGTGTAGTTGAATTTTTTTTCATAGTATCAGGTTGGTGCTTACTTTTCCGAAGACGTGGCGCTGTAGCTCCCACCTTGCAAGATGACTTTCGTCGGATTTCAAGTCATTTCAGAATGTATCTCTCTTCCGAGCTCAAGAAGGCAACTCAAAACTTCAAGGAAGAGTTGGGAAGAGGGTCTTCTGGGGTTGTGTATAAGGGTGTTCTAGAAGACCAAAGAGTTGTAGCTGTCAAGAAATTGGGAGATATTTATCATGCAGAAGATGTGTTTTGGGCAGAAGTAACCACAATCGAAAAAATCCATCACATGAATCTAGTGAGAACATGGGGATTCTGTTCAGAAAATAAACATAGGCTCCTGATCACTGAGTACATCGAAAATGGATCGTTGGACAAGCATTTGTTCTCTCCAGGTTTTCTTGCATGGAAAGAAAGGTTGAAAGTTGCAATGGGGATAGCTAAAGGTTTAGCCTATCTTCACCATGAGTGTCTAGAGTGGGTTATACATTGTGATGTGAAGCCTGAAAATGTACTCCTAGACAGTGATTTTGAGCCAAAGATTGCGGATTTTGGGCTTGCAAAGTTATCTCAAAGAGGTGGCCGCGGTTCAGAGTTCTCTCAAATGAGAGGAACAAAGGGGTACATGGCTCCAGAGTGGGCTTCTAACCTTCCAATCACTGCAAAAGTTGATGTGTACAGTTATGGAGTGGTGATTCTAGAGATAGTGAAGGGCATTCGGCTTTCAAATTGGGTGACGGAAGATGATGAGGAGATAGAAACAGAGATGACAAGGTTTATCAGAGTAGCGAAGCATAGAATTCAAAGTGGAGAAGAGTCATGGATAGAGGATATGTTGGATCCAAGATTGGATGGTGAATACAACAGGAACCAAGCAGCAAAGATGATTAAGATTGGTATTTCCTGCGTGGAGGAAGATCGGTCTAAAAGACCGACAATGGATGCAATAGTACAAATGTTGCTAGAATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

805

Amino Acids

91.46

Weight (kDa)

8.21

Isoelectric Point (pI)

34.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 86 - 173 7.9e-21 D-mannose binding lectin
S_locus_glycop PF00954 266 - 325 6.5e-09 S-locus glycoprotein domain
Pkinase PF00069 528 - 801 2.2e-51 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 528 - 802 3e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 699
AasI GACNNNNNNGTC 1 cut(s) 837
Acc36I ACCTGC 1 cut(s) 1303
AccB1I GGYRCC 1 cut(s) 206
AccB7I CCANNNNNTGG 1 cut(s) 662
AccII CGCG 1 cut(s) 2031
AciI CCGC 6 cut(s) 760, 799, 863, 1991, 2029, 2031
AclWI GGATC 3 cut(s) 1819, 2279, 2292
AcoI YGGCCR 3 cut(s) 270, 653, 2026
AcsI RAATTY 8 cut(s) 34, 424, 462, 823, 1046, 1091, 1439, 2244
AdeI CACNNNGTG 1 cut(s) 458
AfaI GTAC 5 cut(s) 1799, 1959, 2069, 2123, 2397
AfeI AGCGCT 1 cut(s) 1117
AfiI CCNNNNNNNGG 5 cut(s) 246, 247, 264, 293, 662
AflII CTTAAG 1 cut(s) 1052
AflIII ACRYGT 1 cut(s) 185
AjiI CACGTC 1 cut(s) 1484
AjnI CCWGG 4 cut(s) 245, 661, 964, 1837
AjuI GAANNNNNNNTTGG 4 cut(s) 25, 57, 247, 279
Alw21I GWGCWC 1 cut(s) 1563
Alw26I GTCTC 6 cut(s) 375, 544, 823, 845, 1239, 1328
AlwI GGATC 3 cut(s) 1819, 2279, 2292
Ama87I CYCGRG 2 cut(s) 321, 1246
Aor51HI AGCGCT 1 cut(s) 1117
AoxI GGCC 5 cut(s) 270, 448, 653, 788, 2026
ApaI GGGCCC 1 cut(s) 452
ApeKI GCWGC 2 cut(s) 1251, 2321
ApoI RAATTY 8 cut(s) 34, 424, 462, 823, 1046, 1091, 1439, 2244
ArsI GACNNNNNNTTYG 2 cut(s) 1958, 1990
AspLEI GCGC 2 cut(s) 1118, 1490
AspS9I GGNCC 4 cut(s) 448, 449, 629, 788
AsuC2I CCSGG 3 cut(s) 170, 1247, 1248
AsuHPI GGTGA 8 cut(s) 5, 229, 470, 877, 1898, 2149, 2191, 2312
AsuNHI GCTAGC 1 cut(s) 1171
AvaI CYCGRG 2 cut(s) 321, 1246
AvaII GGWCC 1 cut(s) 629
BaeGI GKGCMC 2 cut(s) 452, 1230
BalI TGGCCA 2 cut(s) 272, 655
BamHI GGATCC 1 cut(s) 2284
BanI GGYRCC 1 cut(s) 206
BanII GRGCYC 4 cut(s) 305, 452, 948, 1563
BbsI GAAGAC 3 cut(s) 1486, 1599, 1644
Bbv12I GWGCWC 1 cut(s) 1563
BbvI GCAGC 2 cut(s) 1263, 2333
BccI CCATC 9 cut(s) 236, 262, 320, 347, 620, 812, 1389, 1737, 2291
BciT130I CCWGG 4 cut(s) 247, 663, 966, 1839
BciVI GTATCC 1 cut(s) 1276
BclI TGATCA 2 cut(s) 10, 1788
BcnI CCSGG 3 cut(s) 170, 1247, 1248
BcoDI GTCTC 6 cut(s) 375, 544, 823, 845, 1239, 1328
BfaI CTAG 8 cut(s) 771, 1172, 1634, 1742, 1919, 1964, 2144, 2408
BfmI CTRYAG 3 cut(s) 807, 1422, 1491
BfoI RGCGCY 2 cut(s) 1119, 1491
BfrI CTTAAG 1 cut(s) 1052
BfuAI ACCTGC 1 cut(s) 1303
BfuI GTATCC 1 cut(s) 1276
BglI GCCNNNNNGGC 1 cut(s) 796
BisI GCNGC 3 cut(s) 1252, 2029, 2322
BlpI GCTNAGC 1 cut(s) 414
BlsI GCNGC 3 cut(s) 1253, 2030, 2323
Bme1390I CCNGG 7 cut(s) 170, 247, 663, 966, 1247, 1248, 1839
Bme18I GGWCC 1 cut(s) 629
BmeT110I CYCGRG 2 cut(s) 321, 1246
BmgBI CACGTC 1 cut(s) 1484
BmgT120I GGNCC 4 cut(s) 448, 449, 629, 788
BmiI GGNNCC 9 cut(s) 208, 304, 449, 450, 789, 1784, 2076, 2286, 2315
BmrFI CCNGG 7 cut(s) 170, 247, 663, 966, 1247, 1248, 1839
BmsI GCATC 2 cut(s) 1017, 2377
BmtI GCTAGC 1 cut(s) 1175
BoxI GACNNNNGTC 1 cut(s) 1518
BpiI GAAGAC 3 cut(s) 1486, 1599, 1644
BpmI CTGGAG 4 cut(s) 229, 289, 1821, 2061
Bpu1102I GCTNAGC 1 cut(s) 414
BpuEI CTTGAG 1 cut(s) 1547
BpuMI CCSGG 3 cut(s) 170, 1247, 1248
BsaBI GATNNNNATC 1 cut(s) 1677
BsaI GGTCTC 3 cut(s) 375, 544, 1328
BsaJI CCNNGG 6 cut(s) 168, 246, 522, 1246, 1338, 2029
BsaXI ACNNNNNCTCC 4 cut(s) 209, 239, 1767, 1797
Bsc4I CCNNNNNNNGG 5 cut(s) 246, 247, 264, 293, 662
Bse118I RCCGGY 1 cut(s) 1146
Bse1I ACTGG 5 cut(s) 224, 747, 998, 1040, 1318
Bse3DI GCAATG 1 cut(s) 1881
Bse8I GATNNNNATC 1 cut(s) 1677
BseBI CCWGG 4 cut(s) 247, 663, 966, 1839
BseDI CCNNGG 6 cut(s) 168, 246, 522, 1246, 1338, 2029
BseGI GGATG 7 cut(s) 26, 273, 358, 1008, 1395, 2302, 2392
BseJI GATNNNNATC 1 cut(s) 1677
BseLI CCNNNNNNNGG 5 cut(s) 246, 247, 264, 293, 662
BseMI GCAATG 1 cut(s) 1881
BseMII CTCAG 5 cut(s) 147, 405, 1047, 1318, 1785
BseNI ACTGG 5 cut(s) 224, 747, 998, 1040, 1318
BseRI GAGGAG 1 cut(s) 2210
BseSI GKGCMC 2 cut(s) 452, 1230
BseXI GCAGC 2 cut(s) 1263, 2333
Bsh1236I CGCG 1 cut(s) 2031
BshFI GGCC 5 cut(s) 272, 450, 655, 790, 2028
BshNI GGYRCC 1 cut(s) 206
BsiHKAI GWGCWC 1 cut(s) 1563
BsiHKCI CYCGRG 2 cut(s) 321, 1246
BsiSI CCGG 3 cut(s) 170, 1147, 1247
BslFI GGGAC 1 cut(s) 263
BslI CCNNNNNNNGG 5 cut(s) 246, 247, 264, 293, 662
BsmAI GTCTC 6 cut(s) 375, 544, 823, 845, 1239, 1328
BsmFI GGGAC 1 cut(s) 263
BsmI GAATGC 1 cut(s) 2160
BsnI GGCC 5 cut(s) 272, 450, 655, 790, 2028
Bso31I GGTCTC 3 cut(s) 375, 544, 1328
BsoBI CYCGRG 2 cut(s) 321, 1246
Bsp120I GGGCCC 1 cut(s) 448
Bsp1286I GDGCHC 5 cut(s) 305, 452, 948, 1230, 1563
Bsp1407I TGTACA 1 cut(s) 2121
Bsp143I GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2284, 2362
Bsp1720I GCTNAGC 1 cut(s) 414
Bsp19I CCATGG 1 cut(s) 1338
BspACI CCGC 6 cut(s) 760, 799, 863, 1991, 2029, 2031
BspANI GGCC 5 cut(s) 272, 450, 655, 790, 2028
BspCNI CTCAG 5 cut(s) 146, 406, 1046, 1317, 1786
BspFNI CGCG 1 cut(s) 2031
BspLI GGNNCC 9 cut(s) 208, 304, 449, 450, 789, 1784, 2076, 2286, 2315
BspMAI CTGCAG 1 cut(s) 1426
BspMI ACCTGC 1 cut(s) 1303
BspOI GCTAGC 1 cut(s) 1175
BspPI GGATC 3 cut(s) 1819, 2279, 2292
BspQI GCTCTTC 1 cut(s) 130
BspT107I GGYRCC 1 cut(s) 206
BspTI CTTAAG 1 cut(s) 1052
BspTNI GGTCTC 3 cut(s) 375, 544, 1328
BsrDI GCAATG 1 cut(s) 1881
BsrFI RCCGGY 1 cut(s) 1146
BsrGI TGTACA 1 cut(s) 2121
BsrI ACTGG 5 cut(s) 224, 747, 998, 1040, 1318
BssAI RCCGGY 1 cut(s) 1146
BssECI CCNNGG 6 cut(s) 168, 246, 522, 1246, 1338, 2029
BssMI GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2284, 2362
BssT1I CCWWGG 2 cut(s) 522, 1338
Bst2UI CCWGG 4 cut(s) 247, 663, 966, 1839
Bst4CI ACNGT 5 cut(s) 70, 259, 704, 1970, 2126
Bst6I CTCTTC 8 cut(s) 88, 130, 504, 1278, 1558, 1584, 1594, 2253
BstAFI CTTAAG 1 cut(s) 1052
BstAUI TGTACA 1 cut(s) 2121
BstC8I GCNNGC 3 cut(s) 1120, 1173, 2004
BstDEI CTNAG 6 cut(s) 133, 414, 1014, 1033, 1304, 1794
BstDSI CCRYGG 2 cut(s) 1338, 2029
BstF5I GGATG 7 cut(s) 26, 273, 358, 1008, 1395, 2302, 2392
BstFNI CGCG 1 cut(s) 2031
BstH2I RGCGCY 2 cut(s) 1119, 1491
BstHHI GCGC 2 cut(s) 1118, 1490
BstKTI GATC 7 cut(s) 13, 754, 1087, 1791, 1814, 2287, 2365
BstMAI GTCTC 6 cut(s) 375, 544, 823, 845, 1239, 1328
BstMBI GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2284, 2362
BstMWI GCNNNNNNNGC 3 cut(s) 401, 410, 796
BstNI CCWGG 4 cut(s) 247, 663, 966, 1839
BstNSI RCATGY 2 cut(s) 189, 1032
BstPAI GACNNNNGTC 1 cut(s) 1518
BstSCI CCNGG 7 cut(s) 168, 245, 661, 964, 1245, 1246, 1837
BstSFI CTRYAG 3 cut(s) 807, 1422, 1491
BstSLI GKGCMC 2 cut(s) 452, 1230
BstUI CGCG 1 cut(s) 2031
BstV1I GCAGC 2 cut(s) 1263, 2333
BstV2I GAAGAC 3 cut(s) 1486, 1599, 1644
BstX2I RGATCY 1 cut(s) 2284
BstXI CCANNNNNNTGG 1 cut(s) 1345
BstYI RGATCY 1 cut(s) 2284
BsuI GTATCC 1 cut(s) 1276
BsuRI GGCC 5 cut(s) 272, 450, 655, 790, 2028
BtgI CCRYGG 2 cut(s) 1338, 2029
BtrI CACGTC 1 cut(s) 1484
BtsCI GGATG 7 cut(s) 26, 273, 358, 1008, 1395, 2302, 2392
BtsI GCAGTG 1 cut(s) 2103
BtsIMutI CAGTG 9 cut(s) 66, 141, 314, 754, 1047, 1312, 1791, 1975, 2103
BveI ACCTGC 1 cut(s) 1303
Cac8I GCNNGC 3 cut(s) 1120, 1173, 2004
CfoI GCGC 2 cut(s) 1118, 1490
Cfr10I RCCGGY 1 cut(s) 1146
Cfr13I GGNCC 4 cut(s) 448, 449, 629, 788
Cfr42I CCGCGG 1 cut(s) 2032
Cfr9I CCCGGG 1 cut(s) 1246
Csp6I GTAC 5 cut(s) 1798, 1958, 2068, 2122, 2396
CviQI GTAC 5 cut(s) 1798, 1958, 2068, 2122, 2396
DdeI CTNAG 6 cut(s) 133, 414, 1014, 1033, 1304, 1794
DpnI GATC 7 cut(s) 12, 753, 1086, 1790, 1813, 2286, 2364
DpnII GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2284, 2362
DraIII CACNNNGTG 1 cut(s) 458
DrdI GACNNNNNNGTC 1 cut(s) 837
DseDI GACNNNNNNGTC 1 cut(s) 837
EaeI YGGCCR 3 cut(s) 270, 653, 2026
Eam1104I CTCTTC 8 cut(s) 88, 130, 504, 1278, 1558, 1584, 1594, 2253
EarI CTCTTC 8 cut(s) 88, 130, 504, 1278, 1558, 1584, 1594, 2253
Ecl136II GAGCTC 1 cut(s) 1561
Eco130I CCWWGG 2 cut(s) 522, 1338
Eco24I GRGCYC 4 cut(s) 305, 452, 948, 1563
Eco31I GGTCTC 3 cut(s) 375, 544, 1328
Eco47I GGWCC 1 cut(s) 629
Eco47III AGCGCT 1 cut(s) 1117
Eco53kI GAGCTC 1 cut(s) 1561
Eco88I CYCGRG 2 cut(s) 321, 1246
EcoICRI GAGCTC 1 cut(s) 1561
EcoO109I RGGNCCY 1 cut(s) 448
EcoRI GAATTC 2 cut(s) 424, 2244
EcoRII CCWGG 4 cut(s) 245, 661, 964, 1837
EcoT14I CCWWGG 2 cut(s) 522, 1338
EcoT22I ATGCAT 1 cut(s) 1325
EcoT38I GRGCYC 4 cut(s) 305, 452, 948, 1563
ErhI CCWWGG 2 cut(s) 522, 1338
FalI AAGNNNNNCTT 4 cut(s) 109, 141, 1591, 1623
FaqI GGGAC 1 cut(s) 263
FbaI TGATCA 2 cut(s) 10, 1788
Fnu4HI GCNGC 3 cut(s) 1252, 2029, 2322
FokI GGATG 7 cut(s) 13, 280, 365, 995, 1402, 2309, 2399
FriOI GRGCYC 4 cut(s) 305, 452, 948, 1563
Fsp4HI GCNGC 3 cut(s) 1252, 2029, 2322
FspBI CTAG 8 cut(s) 771, 1172, 1634, 1742, 1919, 1964, 2144, 2408
GlaI GCGC 2 cut(s) 1117, 1489
GluI GCNGC 3 cut(s) 1252, 2029, 2322
GsuI CTGGAG 4 cut(s) 229, 289, 1821, 2061
HaeII RGCGCY 2 cut(s) 1119, 1491
HaeIII GGCC 5 cut(s) 272, 450, 655, 790, 2028
HapII CCGG 3 cut(s) 170, 1147, 1247
HhaI GCGC 2 cut(s) 1118, 1490
Hin6I GCGC 2 cut(s) 1116, 1488
HinP1I GCGC 2 cut(s) 1116, 1488
HincII GTYRAC 1 cut(s) 804
HindII GTYRAC 1 cut(s) 804
HindIII AAGCTT 1 cut(s) 475
HinfI GANTC 7 cut(s) 1057, 1100, 1192, 1738, 1758, 2140, 2261
HpaII CCGG 3 cut(s) 170, 1147, 1247
HphI GGTGA 8 cut(s) 5, 229, 470, 877, 1898, 2149, 2191, 2312
Hpy166II GTNNAC 4 cut(s) 237, 804, 1069, 2122
Hpy8I GTNNAC 4 cut(s) 237, 804, 1069, 2122
Hpy99I CGWCG 2 cut(s) 1192, 1524
HpyAV CCTTC 4 cut(s) 51, 1561, 2105, 2149
HpyCH4III ACNGT 5 cut(s) 70, 259, 704, 1970, 2126
HpyCH4IV ACGT 1 cut(s) 1483
HpyF10VI GCNNNNNNNGC 3 cut(s) 401, 410, 796
HpyF3I CTNAG 6 cut(s) 133, 414, 1014, 1033, 1304, 1794
HpySE526I ACGT 1 cut(s) 1483
HspAI GCGC 2 cut(s) 1116, 1488
Ksp22I TGATCA 2 cut(s) 10, 1788
KspI CCGCGG 1 cut(s) 2032
Kzo9I GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2284, 2362
LguI GCTCTTC 1 cut(s) 130
LmnI GCTCC 4 cut(s) 308, 1501, 1788, 2080
Lsp1109I GCAGC 2 cut(s) 1263, 2333
LweI GCATC 2 cut(s) 1017, 2377
MaeI CTAG 8 cut(s) 771, 1172, 1634, 1742, 1919, 1964, 2144, 2408
MaeII ACGT 1 cut(s) 1483
MaeIII GTNAC 8 cut(s) 560, 773, 865, 1163, 1199, 1309, 1708, 2179
MalI GATC 7 cut(s) 12, 753, 1086, 1790, 1813, 2286, 2364
MboI GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2284, 2362
MflI RGATCY 1 cut(s) 2284
MhlI GDGCHC 5 cut(s) 305, 452, 948, 1230, 1563
MlsI TGGCCA 2 cut(s) 272, 655
MluNI TGGCCA 2 cut(s) 272, 655
MlyI GAGTC 3 cut(s) 1109, 1186, 2270
MmeI TCCRAC 4 cut(s) 960, 1502, 1797, 2262
Mox20I TGGCCA 2 cut(s) 272, 655
Mph1103I ATGCAT 1 cut(s) 1325
MscI TGGCCA 2 cut(s) 272, 655
MseI TTAA 4 cut(s) 291, 1053, 2334, 2416
MslI CAYNNNNRTG 3 cut(s) 68, 1343, 1938
Msp20I TGGCCA 2 cut(s) 272, 655
MspA1I CMGCKG 1 cut(s) 2031
MspCI CTTAAG 1 cut(s) 1052
MspI CCGG 3 cut(s) 170, 1147, 1247
MspR9I CCNGG 7 cut(s) 170, 247, 663, 966, 1247, 1248, 1839
Mva1269I GAATGC 1 cut(s) 2160
MvaI CCWGG 4 cut(s) 247, 663, 966, 1839
MvnI CGCG 1 cut(s) 2031
MwoI GCNNNNNNNGC 3 cut(s) 401, 410, 796
NciI CCSGG 3 cut(s) 170, 1247, 1248
NcoI CCATGG 1 cut(s) 1338
NdeII GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2284, 2362
NheI GCTAGC 1 cut(s) 1171
NlaIV GGNNCC 9 cut(s) 208, 304, 449, 450, 789, 1784, 2076, 2286, 2315
NmuCI GTSAC 4 cut(s) 773, 865, 1309, 2179
NsiI ATGCAT 1 cut(s) 1325
NspI RCATGY 2 cut(s) 189, 1032
PciI ACATGT 1 cut(s) 185
PciSI GCTCTTC 1 cut(s) 130
PctI GAATGC 1 cut(s) 2160
PfeI GAWTC 4 cut(s) 1057, 1738, 1758, 2140
PflMI CCANNNNNTGG 1 cut(s) 662
PkrI GCNGC 3 cut(s) 1253, 2030, 2323
PleI GAGTC 3 cut(s) 1108, 1186, 2269
PpsI GAGTC 3 cut(s) 1108, 1186, 2269
PscI ACATGT 1 cut(s) 185
PshAI GACNNNNGTC 1 cut(s) 1518
PsiI TTATAA 1 cut(s) 699
Psp124BI GAGCTC 1 cut(s) 1563
Psp6I CCWGG 4 cut(s) 245, 661, 964, 1837
PspGI CCWGG 4 cut(s) 245, 661, 964, 1837
PspN4I GGNNCC 9 cut(s) 208, 304, 449, 450, 789, 1784, 2076, 2286, 2315
PspOMI GGGCCC 1 cut(s) 448
PspPI GGNCC 4 cut(s) 448, 449, 629, 788
PstI CTGCAG 1 cut(s) 1426
PsuI RGATCY 1 cut(s) 2284
RsaI GTAC 5 cut(s) 1799, 1959, 2069, 2123, 2397
RsaNI GTAC 5 cut(s) 1798, 1958, 2068, 2122, 2396
RseI CAYNNNNRTG 3 cut(s) 68, 1343, 1938
SacI GAGCTC 1 cut(s) 1563
SacII CCGCGG 1 cut(s) 2032
SapI GCTCTTC 1 cut(s) 130
SaqAI TTAA 4 cut(s) 291, 1053, 2334, 2416
SatI GCNGC 3 cut(s) 1252, 2029, 2322
Sau3AI GATC 7 cut(s) 10, 751, 1084, 1788, 1811, 2284, 2362
Sau96I GGNCC 4 cut(s) 448, 449, 629, 788
SchI GAGTC 3 cut(s) 1109, 1186, 2270
ScrFI CCNGG 7 cut(s) 170, 247, 663, 966, 1247, 1248, 1839
SduI GDGCHC 5 cut(s) 305, 452, 948, 1230, 1563
SfaNI GCATC 2 cut(s) 1017, 2377
SfcI CTRYAG 3 cut(s) 807, 1422, 1491
Sfr303I CCGCGG 1 cut(s) 2032
SgrBI CCGCGG 1 cut(s) 2032
SinI GGWCC 1 cut(s) 629
SmaI CCCGGG 1 cut(s) 1248
SmiMI CAYNNNNRTG 3 cut(s) 68, 1343, 1938
SmlI CTYRAG 2 cut(s) 1052, 1562
SmoI CTYRAG 2 cut(s) 1052, 1562
SsiI CCGC 6 cut(s) 760, 799, 863, 1991, 2029, 2031
SspMI CTAG 8 cut(s) 771, 1172, 1634, 1742, 1919, 1964, 2144, 2408
SstI GAGCTC 1 cut(s) 1563
StyD4I CCNGG 7 cut(s) 168, 245, 661, 964, 1245, 1246, 1837
StyI CCWWGG 2 cut(s) 522, 1338
TaaI ACNGT 5 cut(s) 70, 259, 704, 1970, 2126
TaiI ACGT 1 cut(s) 1486
TaqI TCGA 2 cut(s) 1719, 1803
TaqII GACCGA 2 cut(s) 2355, 2392
TatI WGTACW 4 cut(s) 1797, 1957, 2121, 2395
TauI GCSGC 1 cut(s) 2031
TfiI GAWTC 4 cut(s) 1057, 1738, 1758, 2140
Tru1I TTAA 4 cut(s) 291, 1053, 2334, 2416
Tru9I TTAA 4 cut(s) 291, 1053, 2334, 2416
TscAI CASTG 9 cut(s) 73, 141, 321, 754, 1047, 1312, 1798, 1975, 2110
TseFI GTSAC 4 cut(s) 773, 865, 1309, 2179
TseI GCWGC 2 cut(s) 1251, 2321
Tsp45I GTSAC 4 cut(s) 773, 865, 1309, 2179
TspGWI ACGGA 2 cut(s) 1227, 2198
TspMI CCCGGG 1 cut(s) 1246
TspRI CASTG 9 cut(s) 73, 141, 321, 754, 1047, 1312, 1798, 1975, 2110
Van91I CCANNNNNTGG 1 cut(s) 662
Vha464I CTTAAG 1 cut(s) 1052
VpaK11BI GGWCC 1 cut(s) 629
XapI RAATTY 8 cut(s) 34, 424, 462, 823, 1046, 1091, 1439, 2244
XbaI TCTAGA 3 cut(s) 1633, 1918, 2143
XceI RCATGY 2 cut(s) 189, 1032
XmaI CCCGGG 1 cut(s) 1246
XspI CTAG 8 cut(s) 771, 1172, 1634, 1742, 1919, 1964, 2144, 2408
Zsp2I ATGCAT 1 cut(s) 1325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.