Rroxscaffold_6G00415530

Receptor protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000166
Physical Location & Seq
Reverse (-)
37685645 .. 37688234
2590 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00415530.1

Sequence Viewer

Length: 1809 bp
ATGTATAATGGTCCTGACATTTCAAGCTTGTATTGGCCCAACGTTGAATATAGTGTGTCTGAGAATGGTAGAATTGATTTCAATAGTAATAGAATTGCTGTTTTAGATGAACTTGGTAGTTTTTCATCTAGTGATGAACTGCAGTTCAGTGCTATCGACATGGGTTCGAGAGTGAAAAGGCGGTTGACAATGGATTATGATGGAAATCTAAGACTTTATAGTCTTAATAGCTCAACGGGATTGTGGATGATCACATGGCAAGCTATGGCGGAGCCTTGTAAGGTTCATGGAATTTGTGGGAGAAATGGGATTTGCATTTATACTCCAGCACCCAGGTGTTCATGTCCTCCTGGCTATGAAGTAGCCGATGCAAGTAACTTGAACTTGGGCTGCAAGCCTAAATTCAAGCGTACATGCTCGAAGTCCCAAGAGGAGAAATTCGTGCAGATTCCGCAAGTAGATTTCTATGGATTTGATCTCAATTATGCTACAGAAATTTCAATTGATGATTGCAGACAGCTCTGCTTGGGGGATTGCCGGTGTGAGGCATTTAGCTATAGGCTAAATGGGGAAGGGTGGTGTTACGCCAAAAGTGCTCTTTTCAATGGCTACAAGTCTCCAGATATTGTGGGCAGTATATTCTTGAGAATGCCTGTGAGTGTGGATACATCAAAACCCCAATATTCCAATGCCTCTATTCCATGCAAGACCAATGGTCCTGCAATGTATGGCACTACCGGTAAAAGGGTGAGATGGGTATATCTGTATAGTTTTGCTTTTGCAGTTGGTGCTGTTGAGTTTCTTTTTATAGTATCAGGTTGGTGGCTACTTTTCAGAAGACATGGTAGTGCAGTAATTCCTGTGGAAGACGGATATCGTGTGATTTCAAGTCAATTTAGAAGGTTTCGCTTCAATGAGCTCAAGAATGCAACCAAAAACTTCCAGGAAGAGCTGGGAAGAGGGGCTTCAGGGTCTGTCTATAAGGGTGTTCTGGAGGATGAAAGAGTAGTGGCTGTCAAGAAATTGGCAGATATTCATCAAGGGGAAGATGTATTTTGGGCAGAAGTAAGCACAATTGGCAAAATCAATCACATGAATCTAGTGAGAATTTGGGGATTTTGCTCAGAAGATCAGCAGAGACTACTGGTTTCTGAGTTTGTTGAAAATGGGTCTTTGGACAAGCACTTGTTCACCTCAAATTTACTTGGATGGAAAGAGAGGTATAAAGTTGCACTAGGGATAGCAAAGGGTTTAGCCTATCTTCACCATGAATGTCTGGAATGGGTTATACATTGTGACGTGAAGCCTGAAAATATACTCCTAGACAGTGATTTTGAGCCAAAGATTGCAGATTTTGGGCTAGCAAAGCTAACTCAGAGAGATAGGCTCAGTTCAATGTTCTCTCAGATTCGAGGAACAAAAGGTTATATGGCCCCGGAGTGGGCTATGAACCTTCGAATTACTGCAAAGGTTGATGTTTACAGTTATGGGGTGGTGATCCTGGAGATAGTGAAGGGCATTCGACTTACAAGTTGGGTGCTGGAGGATATTGAAGAGGAGCAAGAAACAGAGCTTACTAAGTTTGTGAGGGAAGCCAAAAGGAAAATTCAACAAGGGGAAGAGTTGTTGATAGAGGATGTTGCTGATCCAAGACTAGAAGGGCAGTTCAGCAGGAACCAAGCAGCAAAGATGGTTGAAATTGGCATTGCCTGTGTGGAGGAAGATAGGAGCAAAAGACCAACAATGGATTCAGTGGTAAAAAGTTTGCTAGAATGTGAAGATGAATCTTACATTCATTCTTCACATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_1 PAN_2 Pkinase S_locus_glycop

Protein Analysis

602

Amino Acids

68.34

Weight (kDa)

5.76

Isoelectric Point (pI)

36.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 43 - 120 1.2e-10 S-locus glycoprotein domain
PAN_2 PF08276 139 - 194 1.6e-06 PAN-like domain
PK_Tyr_Ser-Thr PF07714 314 - 589 1.5e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 315 - 587 8.5e-51 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000166)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g33870 FvH4_5g04230 FvH4_5g04261 FvH4_5g04270 FvH4_5g04300 FvH4_5g04310 FvH4_5g04350 FvH4_6g12870 FvH4_6g12880 FvH4_6g12881 FvH4_6g12890 FvH4_6g12920 FvH4_6g12930
malus_domestica MD04G1137000.v1.1 MD04G1137200.v1.1 MD04G1137300.v1.1 MD12G1151200.v1.1 MD12G1151300.v1.1 MD12G1151400.v1.1 MD12G1151500.v1.1 MD12G1151600.v1.1 MD12G1152000.v1.1 MD15G1076100.v1.1 MD15G1076300.v1.1 MD15G1076400.v1.1
prunus_persica Prupe.1G429600_v2.0.a1 Prupe.1G429700_v2.0.a1 Prupe.5G116500_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.5G116800_v2.0.a1 Prupe.6G263000_v2.0.a1 Prupe.6G263100_v2.0.a1 Prupe.6G263200_v2.0.a1 Prupe.6G263300_v2.0.a1
pyrus_communis pycom04g12430 pycom04g12520 pycom04g12530 pycom04g12550 pycom12g14480 pycom12g14510 pycom15g07110 pycom15g07120
rosa_chinensis RchiOBHm_Chr3g0464611 RchiOBHm_Chr3g0464901 RchiOBHm_Chr3g0464911 RchiOBHm_Chr3g0464941 RchiOBHm_Chr3g0464971 RchiOBHm_Chr3g0464981 RchiOBHm_Chr3g0464991 RchiOBHm_Chr3g0465001 RchiOBHm_Chr3g0465011 RchiOBHm_Chr6g0308531 RchiOBHm_Chr6g0308541 RchiOBHm_Chr6g0308551 RchiOBHm_Chr6g0308581 RchiOBHm_Chr6g0308601 RchiOBHm_Chr6g0308641 RchiOBHm_Chr6g0308651 RchiOBHm_Chr6g0308661 RchiOBHm_Chr6g0308671 RchiOBHm_Chr7g0195221
rosa_laevigata RLG00000001258 RLG00000001261 RLG00000001262 RLG00000001263 RLG00000004137 RLG00000010630 RLG00000010631 RLG00000010633 RLG00000010634 RLG00000024661 RLG00000024662 RLG00000024663 RLG00000024664 RLG00000024665 RLG00000024666 RLG00000024681
rosa_multiflora Rmu_co8160990.1_g000001 Rmu_co8270195.1_g000001 Rmu_co8301123.1_g000001 Rmu_co8390765.1_g000001 Rmu_co8418605.1_g000001 Rmu_sc0000871.1_g000001 Rmu_sc0000871.1_g000007 Rmu_sc0000871.1_g000008 Rmu_sc0001161.1_g000016 Rmu_sc0001161.1_g000017 Rmu_sc0001161.1_g000018 Rmu_sc0002031.1_g000009 Rmu_sc0002381.1_g000010 Rmu_sc0004362.1_g000025 Rmu_sc0004362.1_g000026 Rmu_sc0013106.1_g000001 Rmu_sc0014534.1_g000001 Rmu_sc0014550.1_g000011 Rmu_sc0018858.1_g000002 Rmu_sc0019815.1_g000004 Rmu_sc0029154.1_g000002
rosa_roxburghii Rroxscaffold_3G00260650 Rroxscaffold_6G00415330 Rroxscaffold_6G00415340 Rroxscaffold_6G00415350 Rroxscaffold_6G00415360 Rroxscaffold_6G00415530 Rroxscaffold_7G00160020 Rroxscaffold_7G00160030 Rroxscaffold_7G00160040
rosa_rugosa Rorug03G0073200.1 Rorug03G0074600 Rorug03G0074600 Rorug03G0074700 Rorug03G0074800 Rorug06G0367700 Rorug07G0021800 Rorug07G0183500 Rorug07G0183600 Rorug07G0183700 Rorug07G0183800
rosa_samantha Rh3BG135400 Rh3BG137500 Rh3BG137700 Rh3BG137800 Rh3BG137900 Rh3BG138000 Rh3BG138100 Rh3BG138200 Rh3BG138300 Rh3BG284900 Rh3CG138100 Rh3CG140100 Rh3CG140300 Rh3CG140400 Rh3CG140500 Rh3CG140600 Rh3CG140700 Rh3CG148700 Rh3CG148800 Rh3CG148900 Rh3CG149000 Rh3DG137000 Rh3DG138900 Rh3DG139100 Rh3DG139200 Rh3DG139300 Rh3DG139400 Rh3DG139500 Rh3DG139600 Rh3DG139700 Rh3DG139800 Rh6AG477500 Rh6AG477800 Rh6AG478300 Rh6AG478500 Rh6AG478600 Rh6BG487800 Rh6CG492800 Rh6DG479000 Rh6DG479100 Rh7AG149000 Rh7BG150200 Rh7CG153800 Rh7DG150100
rosa_wichuraiana Rw3G011090 Rw3G011240 Rw3G011250 Rw3G011260 Rw3G011270 Rw3G011280 Rw3G011290 Rw3G011300 Rw3G011310 Rw6G041670 Rw6G041680 Rw6G041700 Rw6G041710 Rw7G012730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 219
AciI CCGC 3 cut(s) 181, 269, 452
AclI AACGTT 1 cut(s) 42
AclWI GGATC 2 cut(s) 1492, 1640
AcsI RAATTY 7 cut(s) 291, 401, 437, 495, 1107, 1198, 1605
AcuI CTGAAG 1 cut(s) 951
AfaI GTAC 1 cut(s) 412
AfiI CCNNNNNNNGG 4 cut(s) 544, 744, 1440, 1441
AgeI ACCGGT 1 cut(s) 737
AhdI GACNNNNNGTC 1 cut(s) 714
AjiI CACGTC 1 cut(s) 1300
AjnI CCWGG 4 cut(s) 332, 349, 942, 1500
AjuI GAANNNNNNNTTGG 2 cut(s) 1732, 1764
AleI CACNNNNGTG 1 cut(s) 334
AluBI AGCT 9 cut(s) 27, 231, 263, 520, 555, 919, 952, 1369, 1573
AluI AGCT 9 cut(s) 27, 231, 263, 520, 555, 919, 952, 1369, 1573
Alw21I GWGCWC 2 cut(s) 598, 921
Alw26I GTCTC 2 cut(s) 621, 1132
AlwI GGATC 2 cut(s) 1492, 1640
AlwNI CAGNNNCTG 1 cut(s) 974
AoxI GGCC 2 cut(s) 35, 1431
ApeKI GCWGC 2 cut(s) 390, 1682
ApoI RAATTY 7 cut(s) 291, 401, 437, 495, 1107, 1198, 1605
ArsI GACNNNNNNTTYG 2 cut(s) 1316, 1348
AsiGI ACCGGT 1 cut(s) 737
AspS9I GGNCC 4 cut(s) 11, 36, 716, 1432
AsuC2I CCSGG 1 cut(s) 1436
AsuHPI GGTGA 4 cut(s) 760, 1183, 1256, 1507
AsuII TTCGAA 1 cut(s) 1456
AsuNHI GCTAGC 1 cut(s) 1360
AvaII GGWCC 2 cut(s) 11, 716
BanII GRGCYC 1 cut(s) 921
BbsI GAAGAC 2 cut(s) 844, 873
Bbv12I GWGCWC 2 cut(s) 598, 921
BbvI GCAGC 2 cut(s) 377, 1694
BccI CCATC 4 cut(s) 194, 747, 1203, 1684
BciT130I CCWGG 4 cut(s) 334, 351, 944, 1502
BciVI GTATCC 1 cut(s) 658
BclI TGATCA 1 cut(s) 249
BcnI CCSGG 1 cut(s) 1436
BcoDI GTCTC 2 cut(s) 621, 1132
BfaI CTAG 7 cut(s) 129, 1100, 1235, 1322, 1361, 1655, 1769
BfmI CTRYAG 3 cut(s) 140, 489, 556
BfuI GTATCC 1 cut(s) 658
BisI GCNGC 2 cut(s) 391, 1683
BlsI GCNGC 2 cut(s) 392, 1684
Bme1390I CCNGG 5 cut(s) 334, 351, 944, 1436, 1502
Bme18I GGWCC 2 cut(s) 11, 716
BmeRI GACNNNNNGTC 1 cut(s) 714
BmgBI CACGTC 1 cut(s) 1300
BmgT120I GGNCC 4 cut(s) 11, 36, 716, 1432
BmiI GGNNCC 3 cut(s) 273, 1434, 1676
BmrFI CCNGG 5 cut(s) 334, 351, 944, 1436, 1502
BmsI GCATC 1 cut(s) 358
BmtI GCTAGC 1 cut(s) 1364
BpiI GAAGAC 2 cut(s) 844, 873
BplI GAGNNNNNCTC 2 cut(s) 1371, 1403
BpmI CTGGAG 5 cut(s) 309, 603, 1013, 1523, 1562
Bpu14I TTCGAA 1 cut(s) 1456
BpuEI CTTGAG 2 cut(s) 664, 905
BpuMI CCSGG 1 cut(s) 1436
BsaBI GATNNNNATC 2 cut(s) 204, 1035
BsaJI CCNNGG 2 cut(s) 332, 1434
BsaWI WCCGGW 1 cut(s) 737
Bsc4I CCNNNNNNNGG 4 cut(s) 544, 744, 1440, 1441
Bse118I RCCGGY 2 cut(s) 537, 737
Bse1I ACTGG 1 cut(s) 1149
Bse3DI GCAATG 2 cut(s) 729, 1704
Bse8I GATNNNNATC 2 cut(s) 204, 1035
BseBI CCWGG 4 cut(s) 334, 351, 944, 1502
BseDI CCNNGG 2 cut(s) 332, 1434
BseGI GGATG 4 cut(s) 252, 1003, 1214, 1642
BseJI GATNNNNATC 2 cut(s) 204, 1035
BseLI CCNNNNNNNGG 4 cut(s) 544, 744, 1440, 1441
BseMI GCAATG 2 cut(s) 729, 1704
BseMII CTCAG 6 cut(s) 51, 1137, 1143, 1388, 1402, 1418
BseNI ACTGG 1 cut(s) 1149
BseRI GAGGAG 2 cut(s) 446, 1571
BseXI GCAGC 2 cut(s) 377, 1694
BseYI CCCAGC 1 cut(s) 952
BsgI GTGCAG 2 cut(s) 464, 870
BshFI GGCC 2 cut(s) 37, 1433
BshTI ACCGGT 1 cut(s) 737
BsiHKAI GWGCWC 2 cut(s) 598, 921
BsiSI CCGG 3 cut(s) 538, 738, 1436
BslFI GGGAC 1 cut(s) 409
BslI CCNNNNNNNGG 4 cut(s) 544, 744, 1440, 1441
BsmAI GTCTC 2 cut(s) 621, 1132
BsmFI GGGAC 1 cut(s) 409
BsmI GAATGC 3 cut(s) 654, 931, 1518
BsnI GGCC 2 cut(s) 37, 1433
Bsp119I TTCGAA 1 cut(s) 1456
Bsp1286I GDGCHC 2 cut(s) 598, 921
Bsp143I GATC 5 cut(s) 249, 475, 1129, 1497, 1645
BspACI CCGC 3 cut(s) 181, 269, 452
BspANI GGCC 2 cut(s) 37, 1433
BspCNI CTCAG 6 cut(s) 52, 1136, 1144, 1387, 1401, 1417
BspLI GGNNCC 3 cut(s) 273, 1434, 1676
BspMAI CTGCAG 1 cut(s) 144
BspOI GCTAGC 1 cut(s) 1364
BspPI GGATC 2 cut(s) 1492, 1640
BspQI GCTCTTC 1 cut(s) 942
BspT104I TTCGAA 1 cut(s) 1456
BsrDI GCAATG 2 cut(s) 729, 1704
BsrFI RCCGGY 2 cut(s) 537, 737
BsrI ACTGG 1 cut(s) 1149
BssAI RCCGGY 2 cut(s) 537, 737
BssECI CCNNGG 2 cut(s) 332, 1434
BssMI GATC 5 cut(s) 249, 475, 1129, 1497, 1645
Bst2UI CCWGG 4 cut(s) 334, 351, 944, 1502
Bst4CI ACNGT 2 cut(s) 1328, 1484
Bst6I CTCTTC 4 cut(s) 942, 952, 1548, 1614
BstAPI GCANNNNNTGC 1 cut(s) 788
BstBI TTCGAA 1 cut(s) 1456
BstC8I GCNNGC 3 cut(s) 261, 395, 1362
BstDEI CTNAG 8 cut(s) 60, 209, 1123, 1152, 1374, 1388, 1404, 1578
BstF5I GGATG 4 cut(s) 252, 1003, 1214, 1642
BstKTI GATC 5 cut(s) 252, 478, 1132, 1500, 1648
BstMAI GTCTC 2 cut(s) 621, 1132
BstMBI GATC 5 cut(s) 249, 475, 1129, 1497, 1645
BstMWI GCNNNNNNNGC 5 cut(s) 451, 593, 788, 1077, 1366
BstNI CCWGG 4 cut(s) 334, 351, 944, 1502
BstNSI RCATGY 1 cut(s) 417
BstSCI CCNGG 5 cut(s) 332, 349, 942, 1434, 1500
BstSFI CTRYAG 3 cut(s) 140, 489, 556
BstV1I GCAGC 2 cut(s) 377, 1694
BstV2I GAAGAC 2 cut(s) 844, 873
BsuI GTATCC 1 cut(s) 658
BsuRI GGCC 2 cut(s) 37, 1433
BtrI CACGTC 1 cut(s) 1300
BtsCI GGATG 4 cut(s) 252, 1003, 1214, 1642
BtsIMutI CAGTG 3 cut(s) 154, 1333, 1758
Cac8I GCNNGC 3 cut(s) 261, 395, 1362
CaiI CAGNNNCTG 1 cut(s) 974
Cfr10I RCCGGY 2 cut(s) 537, 737
Cfr13I GGNCC 4 cut(s) 11, 36, 716, 1432
Csp6I GTAC 1 cut(s) 411
CspAI ACCGGT 1 cut(s) 737
CviAII CATG 9 cut(s) 160, 255, 287, 342, 414, 702, 842, 1093, 1268
CviQI GTAC 1 cut(s) 411
DdeI CTNAG 8 cut(s) 60, 209, 1123, 1152, 1374, 1388, 1404, 1578
DpnI GATC 5 cut(s) 251, 477, 1131, 1499, 1647
DpnII GATC 5 cut(s) 249, 475, 1129, 1497, 1645
DrdI GACNNNNNNGTC 1 cut(s) 219
DriI GACNNNNNGTC 1 cut(s) 714
DseDI GACNNNNNNGTC 1 cut(s) 219
Eam1104I CTCTTC 4 cut(s) 942, 952, 1548, 1614
Eam1105I GACNNNNNGTC 1 cut(s) 714
EarI CTCTTC 4 cut(s) 942, 952, 1548, 1614
EciI GGCGGA 1 cut(s) 284
Ecl136II GAGCTC 1 cut(s) 919
Eco24I GRGCYC 1 cut(s) 921
Eco32I GATATC 1 cut(s) 875
Eco47I GGWCC 2 cut(s) 11, 716
Eco53kI GAGCTC 1 cut(s) 919
Eco57I CTGAAG 1 cut(s) 951
EcoICRI GAGCTC 1 cut(s) 919
EcoRII CCWGG 4 cut(s) 332, 349, 942, 1500
EcoRV GATATC 1 cut(s) 875
EcoT38I GRGCYC 1 cut(s) 921
FaeI CATG 9 cut(s) 163, 258, 290, 345, 417, 705, 845, 1096, 1271
FalI AAGNNNNNCTT 2 cut(s) 949, 981
FaqI GGGAC 1 cut(s) 409
FatI CATG 9 cut(s) 159, 254, 286, 341, 413, 701, 841, 1092, 1267
FbaI TGATCA 1 cut(s) 249
Fnu4HI GCNGC 2 cut(s) 391, 1683
FokI GGATG 4 cut(s) 259, 1010, 1221, 1649
FriOI GRGCYC 1 cut(s) 921
Fsp4HI GCNGC 2 cut(s) 391, 1683
FspBI CTAG 7 cut(s) 129, 1100, 1235, 1322, 1361, 1655, 1769
GluI GCNGC 2 cut(s) 391, 1683
GsaI CCCAGC 1 cut(s) 956
GsuI CTGGAG 5 cut(s) 309, 603, 1013, 1523, 1562
HaeIII GGCC 2 cut(s) 37, 1433
HapII CCGG 3 cut(s) 538, 738, 1436
Hin1II CATG 9 cut(s) 163, 258, 290, 345, 417, 705, 845, 1096, 1271
HincII GTYRAC 1 cut(s) 186
HindII GTYRAC 1 cut(s) 186
HindIII AAGCTT 1 cut(s) 25
HinfI GANTC 5 cut(s) 448, 1096, 1408, 1748, 1784
HpaII CCGG 3 cut(s) 538, 738, 1436
HphI GGTGA 4 cut(s) 760, 1183, 1256, 1507
Hpy166II GTNNAC 3 cut(s) 186, 1191, 1480
Hpy188I TCNGA 6 cut(s) 61, 836, 1126, 1153, 1377, 1407
Hpy188III TCNNGA 8 cut(s) 14, 168, 620, 643, 922, 992, 1018, 1277
Hpy8I GTNNAC 3 cut(s) 186, 1191, 1480
HpyAV CCTTC 5 cut(s) 566, 894, 1463, 1507, 1652
HpyCH4III ACNGT 2 cut(s) 1328, 1484
HpyCH4IV ACGT 2 cut(s) 42, 1299
HpyF10VI GCNNNNNNNGC 5 cut(s) 451, 593, 788, 1077, 1366
HpyF3I CTNAG 8 cut(s) 60, 209, 1123, 1152, 1374, 1388, 1404, 1578
HpySE526I ACGT 2 cut(s) 42, 1299
Hsp92II CATG 9 cut(s) 163, 258, 290, 345, 417, 705, 845, 1096, 1271
Ksp22I TGATCA 1 cut(s) 249
Kzo9I GATC 5 cut(s) 249, 475, 1129, 1497, 1645
LguI GCTCTTC 1 cut(s) 942
LmnI GCTCC 3 cut(s) 271, 1558, 1728
Lsp1109I GCAGC 2 cut(s) 377, 1694
LweI GCATC 1 cut(s) 358
MaeI CTAG 7 cut(s) 129, 1100, 1235, 1322, 1361, 1655, 1769
MaeII ACGT 2 cut(s) 42, 1299
MaeIII GTNAC 3 cut(s) 374, 581, 1295
MalI GATC 5 cut(s) 251, 477, 1131, 1499, 1647
MboI GATC 5 cut(s) 249, 475, 1129, 1497, 1645
MfeI CAATTG 2 cut(s) 501, 1074
MhlI GDGCHC 2 cut(s) 598, 921
MseI TTAA 1 cut(s) 225
MslI CAYNNNNRTG 2 cut(s) 334, 846
MspI CCGG 3 cut(s) 538, 738, 1436
MspR9I CCNGG 5 cut(s) 334, 351, 944, 1436, 1502
MunI CAATTG 2 cut(s) 501, 1074
Mva1269I GAATGC 3 cut(s) 654, 931, 1518
MvaI CCWGG 4 cut(s) 334, 351, 944, 1502
MwoI GCNNNNNNNGC 5 cut(s) 451, 593, 788, 1077, 1366
NciI CCSGG 1 cut(s) 1436
NdeII GATC 5 cut(s) 249, 475, 1129, 1497, 1645
NheI GCTAGC 1 cut(s) 1360
NlaIII CATG 9 cut(s) 163, 258, 290, 345, 417, 705, 845, 1096, 1271
NlaIV GGNNCC 3 cut(s) 273, 1434, 1676
NmuCI GTSAC 1 cut(s) 1295
NspI RCATGY 1 cut(s) 417
NspV TTCGAA 1 cut(s) 1456
OliI CACNNNNGTG 1 cut(s) 334
PciSI GCTCTTC 1 cut(s) 942
PctI GAATGC 3 cut(s) 654, 931, 1518
PfeI GAWTC 5 cut(s) 448, 1096, 1408, 1748, 1784
PfoI TCCNGGA 2 cut(s) 942, 1500
PinAI ACCGGT 1 cut(s) 737
PkrI GCNGC 2 cut(s) 392, 1684
Psp124BI GAGCTC 1 cut(s) 921
Psp1406I AACGTT 1 cut(s) 42
Psp6I CCWGG 4 cut(s) 332, 349, 942, 1500
PspFI CCCAGC 1 cut(s) 952
PspGI CCWGG 4 cut(s) 332, 349, 942, 1500
PspN4I GGNNCC 3 cut(s) 273, 1434, 1676
PspPI GGNCC 4 cut(s) 11, 36, 716, 1432
PstI CTGCAG 1 cut(s) 144
PstNI CAGNNNCTG 1 cut(s) 974
RsaI GTAC 1 cut(s) 412
RsaNI GTAC 1 cut(s) 411
RseI CAYNNNNRTG 2 cut(s) 334, 846
SacI GAGCTC 1 cut(s) 921
SapI GCTCTTC 1 cut(s) 942
SaqAI TTAA 1 cut(s) 225
SatI GCNGC 2 cut(s) 391, 1683
Sau3AI GATC 5 cut(s) 249, 475, 1129, 1497, 1645
Sau96I GGNCC 4 cut(s) 11, 36, 716, 1432
ScrFI CCNGG 5 cut(s) 334, 351, 944, 1436, 1502
SduI GDGCHC 2 cut(s) 598, 921
SfaNI GCATC 1 cut(s) 358
SfcI CTRYAG 3 cut(s) 140, 489, 556
SfuI TTCGAA 1 cut(s) 1456
SinI GGWCC 2 cut(s) 11, 716
SmiMI CAYNNNNRTG 2 cut(s) 334, 846
SmlI CTYRAG 2 cut(s) 643, 920
SmoI CTYRAG 2 cut(s) 643, 920
SsiI CCGC 3 cut(s) 181, 269, 452
SspI AATATT 1 cut(s) 683
SspMI CTAG 7 cut(s) 129, 1100, 1235, 1322, 1361, 1655, 1769
SstI GAGCTC 1 cut(s) 921
StyD4I CCNGG 5 cut(s) 332, 349, 942, 1434, 1500
TaaI ACNGT 2 cut(s) 1328, 1484
TaiI ACGT 2 cut(s) 45, 1302
TaqI TCGA 6 cut(s) 156, 167, 419, 1411, 1456, 1522
TfiI GAWTC 5 cut(s) 448, 1096, 1408, 1748, 1784
Tru1I TTAA 1 cut(s) 225
Tru9I TTAA 1 cut(s) 225
TscAI CASTG 3 cut(s) 154, 1333, 1758
TseFI GTSAC 1 cut(s) 1295
TseI GCWGC 2 cut(s) 390, 1682
Tsp45I GTSAC 1 cut(s) 1295
TspGWI ACGGA 1 cut(s) 885
TspRI CASTG 3 cut(s) 154, 1333, 1758
VpaK11BI GGWCC 2 cut(s) 11, 716
XapI RAATTY 7 cut(s) 291, 401, 437, 495, 1107, 1198, 1605
XceI RCATGY 1 cut(s) 417
XspI CTAG 7 cut(s) 129, 1100, 1235, 1322, 1361, 1655, 1769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.