Disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NB-ARC | PF00931 | 205 - 338 | 1.7e-11 | NB-ARC domain |
| NB-ARC | PF00931 | 361 - 520 | 1.5e-23 | NB-ARC domain |
| LRR_14 | PF23598 | 797 - 869 | 1.2e-06 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 801 - 856 | 3.8e-06 | Leucine rich repeat |
| LRR_RPS2 | PF23247 | 1044 - 1142 | 7.3e-06 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 1248 - 1390 | 2.8e-26 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2820 |
| AarI | CACCTGC | 1 cut(s) | 1184 |
| Acc36I | ACCTGC | 3 cut(s) | 1184, 2118, 4113 |
| Acc65I | GGTACC | 1 cut(s) | 3838 |
| AccB1I | GGYRCC | 2 cut(s) | 478, 3838 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 309, 4174, 4271 |
| AccI | GTMKAC | 4 cut(s) | 1786, 2670, 3577, 3648 |
| AccIII | TCCGGA | 1 cut(s) | 1834 |
| AciI | CCGC | 6 cut(s) | 428, 1288, 2699, 2965, 3083, 4375 |
| AcoI | YGGCCR | 2 cut(s) | 3763, 4307 |
| AcuI | CTGAAG | 5 cut(s) | 344, 1938, 2264, 3341, 3939 |
| AcyI | GRCGYC | 1 cut(s) | 1533 |
| AdeI | CACNNNGTG | 3 cut(s) | 2528, 2862, 3269 |
| AflII | CTTAAG | 2 cut(s) | 2288, 4253 |
| AflIII | ACRYGT | 5 cut(s) | 160, 254, 541, 2565, 2673 |
| AgeI | ACCGGT | 1 cut(s) | 481 |
| AhlI | ACTAGT | 1 cut(s) | 4312 |
| AjnI | CCWGG | 5 cut(s) | 1535, 1735, 2850, 3346, 3590 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 800, 832, 3486, 3518 |
| AleI | CACNNNNGTG | 1 cut(s) | 3060 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 511, 543 |
| Alw21I | GWGCWC | 1 cut(s) | 4437 |
| Alw26I | GTCTC | 8 cut(s) | 138, 245, 747, 2473, 2635, 2677, 2748, 4312 |
| Ama87I | CYCGRG | 3 cut(s) | 1583, 1886, 3458 |
| Aor13HI | TCCGGA | 1 cut(s) | 1834 |
| AoxI | GGCC | 2 cut(s) | 3763, 4307 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2252, 2284 |
| AsiGI | ACCGGT | 1 cut(s) | 481 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 57, 1608, 4279 |
| Asp718I | GGTACC | 1 cut(s) | 3838 |
| AspLEI | GCGC | 1 cut(s) | 2127 |
| AspS9I | GGNCC | 3 cut(s) | 793, 2105, 2967 |
| AsuC2I | CCSGG | 2 cut(s) | 2526, 3653 |
| AsuNHI | GCTAGC | 1 cut(s) | 503 |
| AvaI | CYCGRG | 3 cut(s) | 1583, 1886, 3458 |
| AvaII | GGWCC | 3 cut(s) | 793, 2105, 2967 |
| AxyI | CCTNAGG | 1 cut(s) | 514 |
| BaeGI | GKGCMC | 1 cut(s) | 1663 |
| BalI | TGGCCA | 2 cut(s) | 3765, 4309 |
| BamHI | GGATCC | 2 cut(s) | 748, 4367 |
| BanI | GGYRCC | 2 cut(s) | 478, 3838 |
| BanII | GRGCYC | 3 cut(s) | 1887, 2609, 4437 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2928, 2960 |
| BauI | CACGAG | 1 cut(s) | 2305 |
| BbsI | GAAGAC | 4 cut(s) | 1314, 2289, 3216, 3265 |
| Bbv12I | GWGCWC | 1 cut(s) | 4437 |
| BceAI | ACGGC | 2 cut(s) | 621, 2015 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3832, 3866 |
| BciT130I | CCWGG | 5 cut(s) | 1537, 1737, 2852, 3348, 3592 |
| BciVI | GTATCC | 1 cut(s) | 658 |
| BclI | TGATCA | 2 cut(s) | 1429, 4000 |
| BcnI | CCSGG | 2 cut(s) | 2526, 3653 |
| BcoDI | GTCTC | 8 cut(s) | 138, 245, 747, 2473, 2635, 2677, 2748, 4312 |
| BcuI | ACTAGT | 1 cut(s) | 4312 |
| BfmI | CTRYAG | 4 cut(s) | 295, 1647, 2832, 3009 |
| BfrI | CTTAAG | 2 cut(s) | 2288, 4253 |
| BfuAI | ACCTGC | 3 cut(s) | 1184, 2118, 4113 |
| BfuI | GTATCC | 1 cut(s) | 658 |
| BglII | AGATCT | 3 cut(s) | 3003, 3076, 3442 |
| BlpI | GCTNAGC | 1 cut(s) | 2608 |
| Bme1390I | CCNGG | 7 cut(s) | 1537, 1737, 2526, 2852, 3348, 3592, 3653 |
| Bme18I | GGWCC | 3 cut(s) | 793, 2105, 2967 |
| BmeT110I | CYCGRG | 3 cut(s) | 1583, 1886, 3458 |
| BmgT120I | GGNCC | 3 cut(s) | 793, 2105, 2967 |
| BmiI | GGNNCC | 7 cut(s) | 54, 480, 750, 1466, 1567, 3840, 4369 |
| BmrFI | CCNGG | 7 cut(s) | 1537, 1737, 2526, 2852, 3348, 3592, 3653 |
| BmrI | ACTGGG | 1 cut(s) | 2612 |
| BmsI | GCATC | 3 cut(s) | 1090, 2641, 3016 |
| BmtI | GCTAGC | 1 cut(s) | 507 |
| BmuI | ACTGGG | 1 cut(s) | 2612 |
| BoxI | GACNNNNGTC | 1 cut(s) | 893 |
| BpiI | GAAGAC | 4 cut(s) | 1314, 2289, 3216, 3265 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 491, 523, 1979, 2011, 2530, 2562 |
| BpmI | CTGGAG | 3 cut(s) | 1558, 2771, 2902 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2608 |
| BpuEI | CTTGAG | 6 cut(s) | 361, 2975, 3079, 3146, 3269, 4421 |
| BpuMI | CCSGG | 2 cut(s) | 2526, 3653 |
| BsaAI | YACGTR | 3 cut(s) | 161, 842, 1331 |
| BsaBI | GATNNNNATC | 3 cut(s) | 629, 2370, 3075 |
| BsaHI | GRCGYC | 1 cut(s) | 1533 |
| BsaI | GGTCTC | 1 cut(s) | 2635 |
| BsaJI | CCNNGG | 7 cut(s) | 279, 549, 2791, 2806, 3693, 4048, 4232 |
| BsaWI | WCCGGW | 4 cut(s) | 481, 1834, 2107, 3302 |
| Bse118I | RCCGGY | 1 cut(s) | 481 |
| Bse21I | CCTNAGG | 1 cut(s) | 514 |
| Bse3DI | GCAATG | 2 cut(s) | 103, 3821 |
| Bse8I | GATNNNNATC | 3 cut(s) | 629, 2370, 3075 |
| BseAI | TCCGGA | 1 cut(s) | 1834 |
| BseBI | CCWGG | 5 cut(s) | 1537, 1737, 2852, 3348, 3592 |
| BseDI | CCNNGG | 7 cut(s) | 279, 549, 2791, 2806, 3693, 4048, 4232 |
| BseJI | GATNNNNATC | 3 cut(s) | 629, 2370, 3075 |
| BseMI | GCAATG | 2 cut(s) | 103, 3821 |
| BseMII | CTCAG | 7 cut(s) | 71, 528, 758, 2148, 2468, 2622, 3562 |
| BseRI | GAGGAG | 3 cut(s) | 414, 499, 502 |
| BseSI | GKGCMC | 1 cut(s) | 1663 |
| BshFI | GGCC | 2 cut(s) | 3765, 4309 |
| BshNI | GGYRCC | 2 cut(s) | 478, 3838 |
| BshTI | ACCGGT | 1 cut(s) | 481 |
| BsiHKAI | GWGCWC | 1 cut(s) | 4437 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1583, 1886, 3458 |
| BsiSI | CCGG | 6 cut(s) | 482, 1835, 2108, 2526, 3303, 3653 |
| BslFI | GGGAC | 4 cut(s) | 661, 1018, 1707, 2902 |
| BsmAI | GTCTC | 8 cut(s) | 138, 245, 747, 2473, 2635, 2677, 2748, 4312 |
| BsmBI | CGTCTC | 2 cut(s) | 138, 4312 |
| BsmFI | GGGAC | 4 cut(s) | 661, 1018, 1707, 2902 |
| BsmI | GAATGC | 2 cut(s) | 2010, 4014 |
| BsnI | GGCC | 2 cut(s) | 3765, 4309 |
| Bso31I | GGTCTC | 1 cut(s) | 2635 |
| BsoBI | CYCGRG | 3 cut(s) | 1583, 1886, 3458 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1663, 1887, 2609, 4437 |
| Bsp13I | TCCGGA | 1 cut(s) | 1834 |
| Bsp1407I | TGTACA | 2 cut(s) | 2192, 2562 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2608 |
| Bsp19I | CCATGG | 1 cut(s) | 549 |
| BspACI | CCGC | 6 cut(s) | 428, 1288, 2699, 2965, 3083, 4375 |
| BspANI | GGCC | 2 cut(s) | 3765, 4309 |
| BspCNI | CTCAG | 7 cut(s) | 72, 527, 757, 2149, 2469, 2621, 3561 |
| BspEI | TCCGGA | 1 cut(s) | 1834 |
| BspLI | GGNNCC | 7 cut(s) | 54, 480, 750, 1466, 1567, 3840, 4369 |
| BspMAI | CTGCAG | 1 cut(s) | 299 |
| BspMI | ACCTGC | 3 cut(s) | 1184, 2118, 4113 |
| BspOI | GCTAGC | 1 cut(s) | 507 |
| BspT107I | GGYRCC | 2 cut(s) | 478, 3838 |
| BspTI | CTTAAG | 2 cut(s) | 2288, 4253 |
| BspTNI | GGTCTC | 1 cut(s) | 2635 |
| BsrDI | GCAATG | 2 cut(s) | 103, 3821 |
| BsrFI | RCCGGY | 1 cut(s) | 481 |
| BsrGI | TGTACA | 2 cut(s) | 2192, 2562 |
| BssAI | RCCGGY | 1 cut(s) | 481 |
| BssECI | CCNNGG | 7 cut(s) | 279, 549, 2791, 2806, 3693, 4048, 4232 |
| BssNI | GRCGYC | 1 cut(s) | 1533 |
| BssSI | CACGAG | 1 cut(s) | 2305 |
| BssT1I | CCWWGG | 5 cut(s) | 279, 549, 2791, 3693, 4048 |
| Bst2BI | CACGAG | 1 cut(s) | 2305 |
| Bst2UI | CCWGG | 5 cut(s) | 1537, 1737, 2852, 3348, 3592 |
| Bst6I | CTCTTC | 4 cut(s) | 265, 492, 714, 2675 |
| BstACI | GRCGYC | 1 cut(s) | 1533 |
| BstAFI | CTTAAG | 2 cut(s) | 2288, 4253 |
| BstAUI | TGTACA | 2 cut(s) | 2192, 2562 |
| BstBAI | YACGTR | 3 cut(s) | 161, 842, 1331 |
| BstC8I | GCNNGC | 6 cut(s) | 505, 1796, 1800, 3187, 3353, 4226 |
| BstDSI | CCRYGG | 1 cut(s) | 549 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 343, 4002 |
| BstHHI | GCGC | 1 cut(s) | 2127 |
| BstMAI | GTCTC | 8 cut(s) | 138, 245, 747, 2473, 2635, 2677, 2748, 4312 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 362, 379, 3625, 4187, 4234 |
| BstNI | CCWGG | 5 cut(s) | 1537, 1737, 2852, 3348, 3592 |
| BstNSI | RCATGY | 8 cut(s) | 258, 294, 545, 1754, 2569, 2677, 4228, 4381 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 893 |
| BstSCI | CCNGG | 7 cut(s) | 1535, 1735, 2524, 2850, 3346, 3590, 3651 |
| BstSFI | CTRYAG | 4 cut(s) | 295, 1647, 2832, 3009 |
| BstSLI | GKGCMC | 1 cut(s) | 1663 |
| BstSNI | TACGTA | 1 cut(s) | 842 |
| BstV2I | GAAGAC | 4 cut(s) | 1314, 2289, 3216, 3265 |
| Bsu36I | CCTNAGG | 1 cut(s) | 514 |
| BsuI | GTATCC | 1 cut(s) | 658 |
| BsuRI | GGCC | 2 cut(s) | 3765, 4309 |
| BtgI | CCRYGG | 1 cut(s) | 549 |
| BtsI | GCAGTG | 1 cut(s) | 3649 |
| BtsIMutI | CAGTG | 4 cut(s) | 54, 1103, 2180, 3649 |
| BveI | ACCTGC | 3 cut(s) | 1184, 2118, 4113 |
| Cac8I | GCNNGC | 6 cut(s) | 505, 1796, 1800, 3187, 3353, 4226 |
| CfoI | GCGC | 1 cut(s) | 2127 |
| Cfr10I | RCCGGY | 1 cut(s) | 481 |
| Cfr13I | GGNCC | 3 cut(s) | 793, 2105, 2967 |
| CseI | GACGC | 1 cut(s) | 1541 |
| CsiI | ACCWGGT | 1 cut(s) | 2850 |
| CspAI | ACCGGT | 1 cut(s) | 481 |
| DraIII | CACNNNGTG | 3 cut(s) | 2528, 2862, 3269 |
| EaeI | YGGCCR | 2 cut(s) | 3763, 4307 |
| Eam1104I | CTCTTC | 4 cut(s) | 265, 492, 714, 2675 |
| EarI | CTCTTC | 4 cut(s) | 265, 492, 714, 2675 |
| EciI | GGCGGA | 1 cut(s) | 417 |
| Ecl136II | GAGCTC | 1 cut(s) | 4435 |
| Eco105I | TACGTA | 1 cut(s) | 842 |
| Eco130I | CCWWGG | 5 cut(s) | 279, 549, 2791, 3693, 4048 |
| Eco24I | GRGCYC | 3 cut(s) | 1887, 2609, 4437 |
| Eco31I | GGTCTC | 1 cut(s) | 2635 |
| Eco32I | GATATC | 3 cut(s) | 109, 943, 4024 |
| Eco47I | GGWCC | 3 cut(s) | 793, 2105, 2967 |
| Eco53kI | GAGCTC | 1 cut(s) | 4435 |
| Eco57I | CTGAAG | 5 cut(s) | 344, 1938, 2264, 3341, 3939 |
| Eco81I | CCTNAGG | 1 cut(s) | 514 |
| Eco88I | CYCGRG | 3 cut(s) | 1583, 1886, 3458 |
| EcoICRI | GAGCTC | 1 cut(s) | 4435 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 343, 4002 |
| EcoRI | GAATTC | 2 cut(s) | 683, 1075 |
| EcoRII | CCWGG | 5 cut(s) | 1535, 1735, 2850, 3346, 3590 |
| EcoRV | GATATC | 3 cut(s) | 109, 943, 4024 |
| EcoT14I | CCWWGG | 5 cut(s) | 279, 549, 2791, 3693, 4048 |
| EcoT22I | ATGCAT | 1 cut(s) | 2010 |
| EcoT38I | GRGCYC | 3 cut(s) | 1887, 2609, 4437 |
| ErhI | CCWWGG | 5 cut(s) | 279, 549, 2791, 3693, 4048 |
| Esp3I | CGTCTC | 2 cut(s) | 138, 4312 |
| FaqI | GGGAC | 4 cut(s) | 661, 1018, 1707, 2902 |
| FauI | CCCGC | 1 cut(s) | 3076 |
| FauNDI | CATATG | 1 cut(s) | 3881 |
| FbaI | TGATCA | 2 cut(s) | 1429, 4000 |
| FblI | GTMKAC | 4 cut(s) | 1786, 2670, 3577, 3648 |
| FriOI | GRGCYC | 3 cut(s) | 1887, 2609, 4437 |
| GlaI | GCGC | 1 cut(s) | 2126 |
| GsuI | CTGGAG | 3 cut(s) | 1558, 2771, 2902 |
| HaeIII | GGCC | 2 cut(s) | 3765, 4309 |
| HapII | CCGG | 6 cut(s) | 482, 1835, 2108, 2526, 3303, 3653 |
| HgaI | GACGC | 1 cut(s) | 1541 |
| HhaI | GCGC | 1 cut(s) | 2127 |
| Hin1I | GRCGYC | 1 cut(s) | 1533 |
| Hin6I | GCGC | 1 cut(s) | 2125 |
| HinP1I | GCGC | 1 cut(s) | 2125 |
| HincII | GTYRAC | 3 cut(s) | 1948, 2671, 2785 |
| HindII | GTYRAC | 3 cut(s) | 1948, 2671, 2785 |
| HindIII | AAGCTT | 5 cut(s) | 371, 380, 434, 3187, 4276 |
| HpaII | CCGG | 6 cut(s) | 482, 1835, 2108, 2526, 3303, 3653 |
| HpyCH4IV | ACGT | 5 cut(s) | 160, 841, 1330, 1731, 3574 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 362, 379, 3625, 4187, 4234 |
| HpySE526I | ACGT | 5 cut(s) | 160, 841, 1330, 1731, 3574 |
| Hsp92I | GRCGYC | 1 cut(s) | 1533 |
| HspAI | GCGC | 1 cut(s) | 2125 |
| Kpn2I | TCCGGA | 1 cut(s) | 1834 |
| KpnI | GGTACC | 1 cut(s) | 3842 |
| Ksp22I | TGATCA | 2 cut(s) | 1429, 4000 |
| LmnI | GCTCC | 8 cut(s) | 170, 305, 427, 512, 1011, 3305, 4146, 4233 |
| LweI | GCATC | 3 cut(s) | 1090, 2641, 3016 |
| MabI | ACCWGGT | 1 cut(s) | 2850 |
| MaeII | ACGT | 5 cut(s) | 160, 841, 1330, 1731, 3574 |
| MfeI | CAATTG | 3 cut(s) | 921, 1224, 2623 |
| MhlI | GDGCHC | 4 cut(s) | 1663, 1887, 2609, 4437 |
| MlsI | TGGCCA | 2 cut(s) | 3765, 4309 |
| MluNI | TGGCCA | 2 cut(s) | 3765, 4309 |
| MlyI | GAGTC | 4 cut(s) | 1988, 2679, 3470, 4429 |
| MmeI | TCCRAC | 6 cut(s) | 7, 198, 642, 1633, 3543, 3711 |
| Mox20I | TGGCCA | 2 cut(s) | 3765, 4309 |
| Mph1103I | ATGCAT | 1 cut(s) | 2010 |
| MroI | TCCGGA | 1 cut(s) | 1834 |
| MroXI | GAANNNNTTC | 3 cut(s) | 57, 1608, 4279 |
| MscI | TGGCCA | 2 cut(s) | 3765, 4309 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1755, 3060 |
| Msp20I | TGGCCA | 2 cut(s) | 3765, 4309 |
| MspCI | CTTAAG | 2 cut(s) | 2288, 4253 |
| MspI | CCGG | 6 cut(s) | 482, 1835, 2108, 2526, 3303, 3653 |
| MspR9I | CCNGG | 7 cut(s) | 1537, 1737, 2526, 2852, 3348, 3592, 3653 |
| MunI | CAATTG | 3 cut(s) | 921, 1224, 2623 |
| Mva1269I | GAATGC | 2 cut(s) | 2010, 4014 |
| MvaI | CCWGG | 5 cut(s) | 1537, 1737, 2852, 3348, 3592 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 362, 379, 3625, 4187, 4234 |
| NciI | CCSGG | 2 cut(s) | 2526, 3653 |
| NcoI | CCATGG | 1 cut(s) | 549 |
| NdeI | CATATG | 1 cut(s) | 3881 |
| NheI | GCTAGC | 1 cut(s) | 503 |
| NlaIV | GGNNCC | 7 cut(s) | 54, 480, 750, 1466, 1567, 3840, 4369 |
| NmeAIII | GCCGAG | 1 cut(s) | 4213 |
| NmuCI | GTSAC | 5 cut(s) | 2854, 3195, 3675, 3818, 3922 |
| NsiI | ATGCAT | 1 cut(s) | 2010 |
| NspI | RCATGY | 8 cut(s) | 258, 294, 545, 1754, 2569, 2677, 4228, 4381 |
| OliI | CACNNNNGTG | 1 cut(s) | 3060 |
| PaeI | GCATGC | 1 cut(s) | 4228 |
| PaeR7I | CTCGAG | 2 cut(s) | 1583, 3458 |
| PaqCI | CACCTGC | 1 cut(s) | 1184 |
| PciI | ACATGT | 4 cut(s) | 254, 541, 2565, 2673 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2652 |
| PctI | GAATGC | 2 cut(s) | 2010, 4014 |
| PdmI | GAANNNNTTC | 3 cut(s) | 57, 1608, 4279 |
| PflFI | GACNNNGTC | 1 cut(s) | 2852 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 309, 4174, 4271 |
| PinAI | ACCGGT | 1 cut(s) | 481 |
| PleI | GAGTC | 4 cut(s) | 1988, 2679, 3469, 4428 |
| PpsI | GAGTC | 4 cut(s) | 1988, 2679, 3469, 4428 |
| Ppu21I | YACGTR | 3 cut(s) | 161, 842, 1331 |
| PscI | ACATGT | 4 cut(s) | 254, 541, 2565, 2673 |
| PshAI | GACNNNNGTC | 1 cut(s) | 893 |
| PsiI | TTATAA | 1 cut(s) | 2820 |
| Psp124BI | GAGCTC | 1 cut(s) | 4437 |
| Psp6I | CCWGG | 5 cut(s) | 1535, 1735, 2850, 3346, 3590 |
| PspGI | CCWGG | 5 cut(s) | 1535, 1735, 2850, 3346, 3590 |
| PspN4I | GGNNCC | 7 cut(s) | 54, 480, 750, 1466, 1567, 3840, 4369 |
| PspPI | GGNCC | 3 cut(s) | 793, 2105, 2967 |
| PstI | CTGCAG | 1 cut(s) | 299 |
| PsyI | GACNNNGTC | 1 cut(s) | 2852 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1755, 3060 |
| SacI | GAGCTC | 1 cut(s) | 4437 |
| SalI | GTCGAC | 1 cut(s) | 2669 |
| Sau96I | GGNCC | 3 cut(s) | 793, 2105, 2967 |
| SchI | GAGTC | 4 cut(s) | 1988, 2679, 3470, 4429 |
| ScrFI | CCNGG | 7 cut(s) | 1537, 1737, 2526, 2852, 3348, 3592, 3653 |
| SduI | GDGCHC | 4 cut(s) | 1663, 1887, 2609, 4437 |
| SexAI | ACCWGGT | 1 cut(s) | 2850 |
| SfaNI | GCATC | 3 cut(s) | 1090, 2641, 3016 |
| SfcI | CTRYAG | 4 cut(s) | 295, 1647, 2832, 3009 |
| Sfr274I | CTCGAG | 2 cut(s) | 1583, 3458 |
| SgrAI | CRCCGGYG | 1 cut(s) | 481 |
| SinI | GGWCC | 3 cut(s) | 793, 2105, 2967 |
| SlaI | CTCGAG | 2 cut(s) | 1583, 3458 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1755, 3060 |
| SnaBI | TACGTA | 1 cut(s) | 842 |
| SpeI | ACTAGT | 1 cut(s) | 4312 |
| SphI | GCATGC | 1 cut(s) | 4228 |
| SsiI | CCGC | 6 cut(s) | 428, 1288, 2699, 2965, 3083, 4375 |
| SspI | AATATT | 3 cut(s) | 1371, 2344, 3988 |
| SstI | GAGCTC | 1 cut(s) | 4437 |
| StyD4I | CCNGG | 7 cut(s) | 1535, 1735, 2524, 2850, 3346, 3590, 3651 |
| StyI | CCWWGG | 5 cut(s) | 279, 549, 2791, 3693, 4048 |
| TaiI | ACGT | 5 cut(s) | 163, 844, 1333, 1734, 3577 |
| TaqI | TCGA | 9 cut(s) | 1584, 2142, 2271, 2418, 2537, 2548, 2670, 3459, 4118 |
| TaqII | GACCGA | 1 cut(s) | 3954 |
| TatI | WGTACW | 7 cut(s) | 42, 226, 1201, 2192, 2562, 3876, 4390 |
| TscAI | CASTG | 4 cut(s) | 54, 1110, 2187, 3649 |
| TseFI | GTSAC | 5 cut(s) | 2854, 3195, 3675, 3818, 3922 |
| Tsp45I | GTSAC | 5 cut(s) | 2854, 3195, 3675, 3818, 3922 |
| TspGWI | ACGGA | 5 cut(s) | 1024, 1477, 2416, 3478, 4336 |
| TspRI | CASTG | 4 cut(s) | 54, 1110, 2187, 3649 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2852 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 309, 4174, 4271 |
| Vha464I | CTTAAG | 2 cut(s) | 2288, 4253 |
| VpaK11BI | GGWCC | 3 cut(s) | 793, 2105, 2967 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 343, 4002 |
| XbaI | TCTAGA | 4 cut(s) | 3073, 3223, 3428, 4423 |
| XceI | RCATGY | 8 cut(s) | 258, 294, 545, 1754, 2569, 2677, 4228, 4381 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3733 |
| XhoI | CTCGAG | 2 cut(s) | 1583, 3458 |
| XmiI | GTMKAC | 4 cut(s) | 1786, 2670, 3577, 3648 |
| XmnI | GAANNNNTTC | 3 cut(s) | 57, 1608, 4279 |
| Zsp2I | ATGCAT | 1 cut(s) | 2010 |