Rh6BG252600

ADP binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000203
Physical Location & Seq
Forward (+)
46382624 .. 46400181
17558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG252600.1

Sequence Viewer

Length: 2784 bp
ATGGAAGCTATCGTTTCATCAGTTCTTGGAAAACTAGCAGAGTACACAGTTGAACCGGTTCTGCGACAGTTTGGTTATCTGATTCACTATGAGAGTAACGTTGCTCGTCTCAACAACCAAGTTGAGAGGCTGAATGCCCAAAGACGCGACGTGGCAGAAAAAATTGAAGCAGCGACCAGGAATTCAGAGACTATTCTTCACCAAGTTGAGATCTGGTTGGACCAGGTGGATCGAACCTTACGAGACAAGGATACGTGTTTTGAAAACGAGCGAACAGCAAAGGCCGAATGCTGCTCAAATGGCTGGTTCCCCAATTTGAAGATACGGCATTCCTTGAGTAGGAAAGCGAAGAAGATGACTCCGGATGTCGATAGCCTCGTTGATAACAAGTTTGAGGTTGTAGGCTTCGCTGCCAGACATGAAGGGGCCACCTCCTCCCAGGCATCCAACATTATGAATTTTGAATCAAGAAAATCAACCATTGAAGAATTGCTGGGCCTGAAACTTGAAGAACAGGTTTTAGAATCAAGAGCAGATAAGTTATTTAATAGATTATCTGCTAAGAGAGTTCTTGTAGTATTAGATAATGTTTGGGAAACGCTGGATTTGCGGGAAATAGGGATTCCCAGTGGTCTAAACAGTTGTAAAATCTTGGTAACATCACGAAACCAAGATATCTTCAATGATATGGAAGAAAATAGAAAGAAATTCCCCATTGGCGTTTTGCCCGAAAGTGATGCATGGAGTCTGTTTAAGAAGATGGCTGGAGATGACATTGAATCTGATCCCGAGCTGCGTTCGATAGCAGAACAGGTACTCGAGAAATGTGATGGATTACCAGTTGCAATTTCGACTCTGGGAAGCGCACTACGGCGGAAAACGAAAGCGGTCTGGAATGATGCACTCAGACTATTACAAAAGCATTTCGGGGGAGATATTCAAGGAATGAAGAAGAACGTGTATCAGTCAATCAGGTTGAGTTACGACTTTCTGGAAAGAGAGGAGGCCAAATCCTGTTTTCTGTTGTGTTGCATATTTCGAGAAAGCACTAATATATGTGTTGAAGATTTGGTGACGCATGGATTTGGTCTTGGGGTCTTACACAGAATTGATTCAGTTGAAGGGGGAAGGGATCGTGTAGAAGCCTTGGTTGACACACTCAAAAGTTGCTATTTATTGTTGGACAGTGACAAAGAAGAGTGTGTAAGAATGCATGACGTGGTGCGTGCCGTAGGCTTACATATAGCCTCTGCTGAGAGTGAAGGCACATTTCTTATAAGACACGGAGTGGCATCGGAGAATTGGACCCGGGGATTCATTTGTACATCACTGACCGCCAATAAAAGTACTCATGAGCTTTTGTTGTTGTCATGCACAGATGATGAAAAGAGGTCTGATGTGGACACACTAGGCACATTGTACGGAGTGGAAGATCTTAAGGTCTTGGACATCTCAGTTCCTTATAAGGGTCTTTATACATGGATAACGTTTGCTATTATGTCTAGAACAAGATTGGAATCACTTCCGGTACTTATGAGAAACATTCAAACACTGTGTCTAAGGGGTTTAGAACTCAGATTGGAAACAATTTCTATGATTGGGGACCTACGGACACTCACGATACTCCGCCTAGGTGGATCTTCCATACAGCATGTACCTGAGGAATTTAAAAACTTGTGCAATCTAAAGTTGCTAAATTTGGCGGATTGTTCAGAACTTCAAGAAATCTCACCAGGTGTCATATCAAGTTTAACCAAACTAGAAGAATTGTACTTGTGGGGTAGCTTCGAGGACTGGAATGATGTGCGGATTATTCAACTTTCATCGGAGCTACTGCAGTTGCCTTTGTTGACGAGTTTAGAAACCACTCTGTCTGTTGATATTCTGCAAAACAGCAGGCATCTATTTGCTAAGCTTAAAAGATTTAGGCTGTGTATACTAAAAAATAAAAGACGTGCACCCAAGTTTCTCCGCAGTATACCACTTTACAAATTGCCTGCAAATCCTCGTGACAACCTCTTGAGACTTGAAGATCTTGGCGCAGACTGCTCGCTTCTGGAAGTCTCTGTGTTGCTAAAGACAACTCATTTTCTACACCTAGGAAATGAAACTTTGCCCCGCCCTTTCAATGTAGTAGATGCAGAGTGCGGTGGAAACTTGAAGGGTCTTACGGTCACAGACTGTGATGCTCTGGAATATCTCGTTGACTTGACACGTGCTGAAACTACTCCTGTAGTCTTTCCTGTCTTGGCTTCACTGAAGATCTATGGTGCACAGAGGCTGAAGGAGATTTTTCATGGATTACTGCCAGTGGGGTCGCTTAAATCACTACGACGTTTAATCATACACCGGGCGGATGAATTAAGGCATGTTTGGAAGACAGAAAGCCAGTTTGATCGCCTGGAAAGTCTAACATTAGCCGATTGCCAATCGTTGCAAGTTATTGTTGCTTGGCAAGAATCGGGGCATCATCACGAGGAAGAAGCCAAGGAGATCAACTTCCCTAATTTGACACAGTTGGAACTTGCAGAACTACCGAGCCTCGTTGGGATATGTAGCAAAAAAGTCTGCAAGCTCAACTTCTCTAAATTGTTAGATTTACAACTCAGAACGCTTCCGCGACTCAGTGGTCAGTGGTTGAATGGTTTGGCTCCAACAAGCAACTCTAATGACGTCGATGTACAACATCTATTCGACCCCAAGCCGCCGGCGCGATCCACCATTGCTCCTCACCTACGCTCGCCGCCGGCGCTCTCCACCGTCACAGCATCCAAGATCGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

927

Amino Acids

104.57

Weight (kDa)

6.09

Isoelectric Point (pI)

47.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 173 - 256 3.1e-16 NB-ARC domain
LRR_14 PF23598 531 - 627 4.5e-06 Leucine-rich repeat region
LRR_8 PF13855 537 - 592 1.6e-06 Leucine rich repeat
LRR_RPS2 PF23247 758 - 869 1.8e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000203)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g02740 FvH4_1g02750 FvH4_2g17380 FvH4_2g17381 FvH4_2g17400 FvH4_2g17410 FvH4_2g17420 FvH4_2g36800 FvH4_2g36802 FvH4_2g36810 FvH4_2g36830 FvH4_2g36840 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36850 FvH4_2g36860 FvH4_4g35200 FvH4_4g35200 FvH4_4g35200 FvH4_6g02712 FvH4_6g02712 FvH4_6g02713 FvH4_6g02760 FvH4_6g02790 FvH4_6g02820
prunus_persica Prupe.8G185600_v2.0.a1 Prupe.8G185700_v2.0.a1 Prupe.8G185800_v2.0.a1
pyrus_communis pycom05g14750
rosa_chinensis RchiOBHm_Chr1g0341391 RchiOBHm_Chr5g0061651 RchiOBHm_Chr5g0061661 RchiOBHm_Chr5g0080761 RchiOBHm_Chr6g0281031 RchiOBHm_Chr6g0282051 RchiOBHm_Chr6g0304941
rosa_laevigata RLG00000003533 RLG00000005089 RLG00000008660 RLG00000010934 RLG00000010935 RLG00000010936 RLG00000010937 RLG00000012912 RLG00000012917 RLG00000013003 RLG00000013004 RLG00000035489 RLG00000035491 RLG00000035492
rosa_multiflora Rmu_co8167864.1_g000001 Rmu_sc0000014.1_g000008 Rmu_sc0000014.1_g000011 Rmu_sc0000014.1_g000012 Rmu_sc0000047.1_g000008 Rmu_sc0000301.1_g000009 Rmu_sc0000569.1_g000011 Rmu_sc0000569.1_g000020 Rmu_sc0001700.1_g000009 Rmu_sc0001700.1_g000016 Rmu_sc0001700.1_g000032 Rmu_sc0001700.1_g000044 Rmu_sc0002720.1_g000017 Rmu_sc0005149.1_g000009 Rmu_sc0005210.1_g000001 Rmu_sc0009256.1_g000004 Rmu_sc0012869.1_g000004 Rmu_sc0016179.1_g000008 Rmu_sc0016179.1_g000009 Rmu_sc0018903.1_g000001 Rmu_sc0018903.1_g000003 Rmu_sc0024112.1_g000001 Rmu_sc0030824.1_g000001 Rmu_sc0036328.1_g000001 Rmu_sc0041575.1_g000001 Rmu_ssc0000091.1_g000011 Rmu_ssc0000173.1_g000025
rosa_roxburghii Rroxscaffold_1G00019090 Rroxscaffold_3G00270850 Rroxscaffold_3G00270870 Rroxscaffold_4G00312030 Rroxscaffold_7G00163330 Rroxscaffold_7G00186580 Rroxscaffold_7G00187370
rosa_rugosa Rorug01G0156700.1 Rorug01G0156800.1 Rorug01G0156900.1 Rorug03G0141600 Rorug03G0141700 Rorug03G0141800 Rorug04G0084700 Rorug04G0084700 Rorug05G0298800 Rorug06G0145000 Rorug06G0145200 Rorug06G0336400 Rorug06G0336400 Rorug06G0451600 Rorug06G0451800
rosa_samantha Rh1AG171900 Rh1BG139600 Rh1CG159700 Rh1CG159800 Rh1CG159900 Rh1DG172000 Rh4AG149300 Rh4BG146200 Rh4CG156500 Rh4DG142300 Rh5AG403900 Rh5BG416500 Rh5CG440700 Rh5CG440800 Rh5CG441000 Rh5CG441100 Rh5DG430500 Rh5DG430700 Rh6AG250300 Rh6AG258200 Rh6AG447600 Rh6BG252600 Rh6BG261200 Rh6BG261700 Rh6BG453400 Rh6BG453500 Rh6BG453700 Rh6CG253000 Rh6CG260100 Rh6CG260500 Rh6CG461200 Rh6DG244700 Rh6DG252500 Rh6DG448200 Rh7AG055000 Rh7AG055100 Rh7AG055200 Rh7BG054500 Rh7BG054600 Rh7CG055900 Rh7DG054600 Rh7DG054700
rosa_wichuraiana Rw0G009830 Rw0G014970 Rw1G014320 Rw5G037960 Rw6G021650 Rw6G021720 Rw6G022330 Rw6G022350 Rw6G038980 Rw7G004490

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1277, 1464
AasI GACNNNNNNGTC 1 cut(s) 2628
AatII GACGTC 1 cut(s) 2676
AccI GTMKAC 2 cut(s) 1936, 1978
AccII CGCG 3 cut(s) 147, 2620, 2713
AccIII TCCGGA 1 cut(s) 361
AclI AACGTT 2 cut(s) 99, 1487
AclWI GGATC 5 cut(s) 237, 779, 1140, 1645, 2709
AcsI RAATTY 5 cut(s) 181, 457, 707, 1664, 1696
AcuI CTGAAG 2 cut(s) 2279, 2303
AcvI CACGTG 1 cut(s) 2216
AcyI GRCGYC 1 cut(s) 2673
AdeI CACNNNGTG 2 cut(s) 1288, 1736
AfaI GTAC 9 cut(s) 44, 816, 1324, 1348, 1421, 1530, 1656, 1772, 2682
AfiI CCNNNNNNNGG 2 cut(s) 339, 1466
AflII CTTAAG 1 cut(s) 1436
AflIII ACRYGT 3 cut(s) 254, 957, 2213
AgeI ACCGGT 1 cut(s) 55
AjiI CACGTC 3 cut(s) 151, 1219, 1955
AjnI CCWGG 5 cut(s) 176, 222, 438, 1732, 2400
AluBI AGCT 7 cut(s) 8, 793, 1357, 1785, 1831, 1915, 2575
AluI AGCT 7 cut(s) 8, 793, 1357, 1785, 1831, 1915, 2575
Alw21I GWGCWC 2 cut(s) 1960, 2275
Alw26I GTCTC 5 cut(s) 113, 182, 237, 2017, 2068
Alw44I GTGCAC 2 cut(s) 1956, 2271
AlwI GGATC 5 cut(s) 237, 779, 1140, 1645, 2709
AlwNI CAGNNNCTG 1 cut(s) 2281
Ama87I CYCGRG 3 cut(s) 788, 818, 1308
Aor13HI TCCGGA 1 cut(s) 361
AoxI GGCC 4 cut(s) 282, 426, 496, 1005
ApaLI GTGCAC 2 cut(s) 1956, 2271
ApeKI GCWGC 4 cut(s) 170, 291, 410, 793
ApoI RAATTY 5 cut(s) 181, 457, 707, 1664, 1696
ArsI GACNNNNNNTTYG 2 cut(s) 1540, 1572
AsiGI ACCGGT 1 cut(s) 55
Asp700I GAANNNNTTC 3 cut(s) 57, 1111, 1521
AspA2I CCTAGG 2 cut(s) 1630, 2098
AspLEI GCGC 4 cut(s) 866, 2042, 2713, 2752
AspS9I GGNCC 5 cut(s) 220, 426, 496, 1305, 1603
AsuC2I CCSGG 3 cut(s) 1309, 1310, 2351
AsuHPI GGTGA 4 cut(s) 191, 1084, 1722, 2723
AvaI CYCGRG 3 cut(s) 788, 818, 1308
AvaII GGWCC 3 cut(s) 220, 1305, 1603
AvrII CCTAGG 2 cut(s) 1630, 2098
AxyI CCTNAGG 1 cut(s) 1659
BaeGI GKGCMC 2 cut(s) 1960, 2275
BauI CACGAG 2 cut(s) 2007, 2474
BbrPI CACGTG 1 cut(s) 2216
BbsI GAAGAC 1 cut(s) 2384
Bbv12I GWGCWC 2 cut(s) 1960, 2275
BbvI GCAGC 4 cut(s) 182, 278, 397, 780
BccI CCATC 2 cut(s) 754, 824
BceAI ACGGC 3 cut(s) 341, 887, 1214
BcgI CGANNNNNNTGC 4 cut(s) 719, 753, 2031, 2065
BciT130I CCWGG 5 cut(s) 178, 224, 440, 1734, 2402
BciVI GTATCC 1 cut(s) 244
BcnI CCSGG 3 cut(s) 1309, 1310, 2351
BcoDI GTCTC 5 cut(s) 113, 182, 237, 2017, 2068
BfaI CTAG 7 cut(s) 35, 1409, 1503, 1631, 1760, 2099, 2782
BfmI CTRYAG 2 cut(s) 1835, 2232
BfoI RGCGCY 1 cut(s) 2753
BfrI CTTAAG 1 cut(s) 1436
BfuI GTATCC 1 cut(s) 244
BglII AGATCT 4 cut(s) 210, 1432, 2032, 2262
BisI GCNGC 6 cut(s) 171, 292, 411, 794, 2705, 2744
BlnI CCTAGG 2 cut(s) 1630, 2098
BlpI GCTNAGC 1 cut(s) 1911
BlsI GCNGC 6 cut(s) 172, 293, 412, 795, 2706, 2745
BmcAI AGTACT 1 cut(s) 1348
Bme1390I CCNGG 8 cut(s) 178, 224, 440, 1309, 1310, 1734, 2351, 2402
Bme18I GGWCC 3 cut(s) 220, 1305, 1603
BmeT110I CYCGRG 3 cut(s) 788, 818, 1308
BmgBI CACGTC 3 cut(s) 151, 1219, 1955
BmgT120I GGNCC 5 cut(s) 220, 426, 496, 1305, 1603
BmiI GGNNCC 5 cut(s) 308, 427, 1307, 1604, 2652
BmrFI CCNGG 8 cut(s) 178, 224, 440, 1309, 1310, 1734, 2351, 2402
BmrI ACTGGG 1 cut(s) 621
BmsI GCATC 9 cut(s) 452, 727, 889, 1301, 1909, 2128, 2176, 2476, 2777
BmuI ACTGGG 1 cut(s) 621
BpiI GAAGAC 1 cut(s) 2384
BpmI CTGGAG 1 cut(s) 786
Bpu1102I GCTNAGC 1 cut(s) 1911
BpuEI CTTGAG 2 cut(s) 355, 2041
BpuMI CCSGG 3 cut(s) 1309, 1310, 2351
BsaAI YACGTR 2 cut(s) 255, 2216
BsaBI GATNNNNATC 1 cut(s) 1516
BsaHI GRCGYC 1 cut(s) 2673
BsaJI CCNNGG 7 cut(s) 438, 1146, 1308, 1309, 1630, 2098, 2487
BsaWI WCCGGW 3 cut(s) 55, 361, 1525
BsaXI ACNNNNNCTCC 2 cut(s) 2710, 2740
Bsc4I CCNNNNNNNGG 2 cut(s) 339, 1466
Bse118I RCCGGY 3 cut(s) 55, 2707, 2746
Bse1I ACTGG 5 cut(s) 627, 839, 1799, 2309, 2389
Bse21I CCTNAGG 1 cut(s) 1659
Bse3DI GCAATG 1 cut(s) 2721
Bse8I GATNNNNATC 1 cut(s) 1516
BseAI TCCGGA 1 cut(s) 361
BseBI CCWGG 5 cut(s) 178, 224, 440, 1734, 2402
BseDI CCNNGG 7 cut(s) 438, 1146, 1308, 1309, 1630, 2098, 2487
BseGI GGATG 4 cut(s) 370, 443, 2362, 2768
BseJI GATNNNNATC 1 cut(s) 1516
BseLI CCNNNNNNNGG 2 cut(s) 339, 1466
BseMI GCAATG 1 cut(s) 2721
BseMII CTCAG 7 cut(s) 919, 1245, 1467, 1588, 1650, 2620, 2638
BseNI ACTGG 5 cut(s) 627, 839, 1799, 2309, 2389
BseRI GAGGAG 3 cut(s) 424, 1016, 2718
BseSI GKGCMC 2 cut(s) 1960, 2275
BseXI GCAGC 4 cut(s) 182, 278, 397, 780
BseYI CCCAGC 1 cut(s) 493
Bsh1236I CGCG 3 cut(s) 147, 2620, 2713
BshFI GGCC 4 cut(s) 284, 428, 498, 1007
BshTI ACCGGT 1 cut(s) 55
BsiHKAI GWGCWC 2 cut(s) 1960, 2275
BsiHKCI CYCGRG 3 cut(s) 788, 818, 1308
BsiSI CCGG 7 cut(s) 56, 362, 1309, 1526, 2350, 2708, 2747
BslFI GGGAC 1 cut(s) 1616
BslI CCNNNNNNNGG 2 cut(s) 339, 1466
BsmAI GTCTC 5 cut(s) 113, 182, 237, 2017, 2068
BsmBI CGTCTC 1 cut(s) 113
BsmFI GGGAC 1 cut(s) 1616
BsmI GAATGC 4 cut(s) 139, 293, 328, 1215
BsnI GGCC 4 cut(s) 284, 428, 498, 1007
BsoBI CYCGRG 3 cut(s) 788, 818, 1308
Bsp1286I GDGCHC 2 cut(s) 1960, 2275
Bsp13I TCCGGA 1 cut(s) 361
Bsp1407I TGTACA 2 cut(s) 1322, 2680
Bsp1720I GCTNAGC 1 cut(s) 1911
BspANI GGCC 4 cut(s) 284, 428, 498, 1007
BspCNI CTCAG 7 cut(s) 918, 1246, 1466, 1587, 1651, 2619, 2637
BspEI TCCGGA 1 cut(s) 361
BspFNI CGCG 3 cut(s) 147, 2620, 2713
BspHI TCATGA 1 cut(s) 1351
BspLI GGNNCC 5 cut(s) 308, 427, 1307, 1604, 2652
BspMAI CTGCAG 1 cut(s) 1839
BspPI GGATC 5 cut(s) 237, 779, 1140, 1645, 2709
BspTI CTTAAG 1 cut(s) 1436
BsrDI GCAATG 1 cut(s) 2721
BsrFI RCCGGY 3 cut(s) 55, 2707, 2746
BsrGI TGTACA 2 cut(s) 1322, 2680
BsrI ACTGG 5 cut(s) 627, 839, 1799, 2309, 2389
BssAI RCCGGY 3 cut(s) 55, 2707, 2746
BssECI CCNNGG 7 cut(s) 438, 1146, 1308, 1309, 1630, 2098, 2487
BssNAI GTATAC 2 cut(s) 1937, 1979
BssNI GRCGYC 1 cut(s) 2673
BssSI CACGAG 2 cut(s) 2007, 2474
BssT1I CCWWGG 4 cut(s) 1146, 1630, 2098, 2487
Bst1107I GTATAC 2 cut(s) 1937, 1979
Bst2BI CACGAG 2 cut(s) 2007, 2474
Bst2UI CCWGG 5 cut(s) 178, 224, 440, 1734, 2402
Bst4CI ACNGT 9 cut(s) 49, 69, 641, 1187, 1554, 2173, 2183, 2517, 2761
Bst6I CTCTTC 1 cut(s) 1191
BstACI GRCGYC 1 cut(s) 2673
BstAFI CTTAAG 1 cut(s) 1436
BstAUI TGTACA 2 cut(s) 1322, 2680
BstBAI YACGTR 2 cut(s) 255, 2216
BstC8I GCNNGC 8 cut(s) 1227, 1898, 1998, 2051, 2573, 2709, 2741, 2748
BstENI CCTNNNNNAGG 1 cut(s) 337
BstF5I GGATG 4 cut(s) 370, 443, 2362, 2768
BstFNI CGCG 3 cut(s) 147, 2620, 2713
BstH2I RGCGCY 1 cut(s) 2753
BstHHI GCGC 4 cut(s) 866, 2042, 2713, 2752
BstMAI GTCTC 5 cut(s) 113, 182, 237, 2017, 2068
BstMWI GCNNNNNNNGC 5 cut(s) 300, 607, 2046, 2710, 2749
BstNI CCWGG 5 cut(s) 178, 224, 440, 1734, 2402
BstNSI RCATGY 2 cut(s) 1655, 2372
BstSCI CCNGG 8 cut(s) 176, 222, 438, 1307, 1308, 1732, 2349, 2400
BstSFI CTRYAG 2 cut(s) 1835, 2232
BstSLI GKGCMC 2 cut(s) 1960, 2275
BstUI CGCG 3 cut(s) 147, 2620, 2713
BstV1I GCAGC 4 cut(s) 182, 278, 397, 780
BstV2I GAAGAC 1 cut(s) 2384
BstX2I RGATCY 5 cut(s) 210, 1432, 1637, 2032, 2262
BstYI RGATCY 5 cut(s) 210, 1432, 1637, 2032, 2262
BstZ17I GTATAC 2 cut(s) 1937, 1979
Bsu36I CCTNAGG 1 cut(s) 1659
BsuI GTATCC 1 cut(s) 244
BsuRI GGCC 4 cut(s) 284, 428, 498, 1007
BtrI CACGTC 3 cut(s) 151, 1219, 1955
BtsCI GGATG 4 cut(s) 370, 443, 2362, 2768
BtsIMutI CAGTG 8 cut(s) 634, 1192, 1328, 1550, 2255, 2316, 2632, 2639
Cac8I GCNNGC 8 cut(s) 1227, 1898, 1998, 2051, 2573, 2709, 2741, 2748
CaiI CAGNNNCTG 1 cut(s) 2281
CciI TCATGA 1 cut(s) 1351
CfoI GCGC 4 cut(s) 866, 2042, 2713, 2752
Cfr10I RCCGGY 3 cut(s) 55, 2707, 2746
Cfr13I GGNCC 5 cut(s) 220, 426, 496, 1305, 1603
Cfr9I CCCGGG 1 cut(s) 1308
CseI GACGC 2 cut(s) 153, 1084
CsiI ACCWGGT 2 cut(s) 222, 1732
Csp6I GTAC 9 cut(s) 43, 815, 1323, 1347, 1420, 1529, 1655, 1771, 2681
CspAI ACCGGT 1 cut(s) 55
CviQI GTAC 9 cut(s) 43, 815, 1323, 1347, 1420, 1529, 1655, 1771, 2681
DraI TTTAAA 1 cut(s) 1669
DraIII CACNNNGTG 2 cut(s) 1288, 1736
DrdI GACNNNNNNGTC 1 cut(s) 2628
DseDI GACNNNNNNGTC 1 cut(s) 2628
Eam1104I CTCTTC 1 cut(s) 1191
EarI CTCTTC 1 cut(s) 1191
EciI GGCGGA 4 cut(s) 889, 1616, 1718, 2369
Eco130I CCWWGG 4 cut(s) 1146, 1630, 2098, 2487
Eco32I GATATC 1 cut(s) 676
Eco47I GGWCC 3 cut(s) 220, 1305, 1603
Eco57I CTGAAG 2 cut(s) 2279, 2303
Eco72I CACGTG 1 cut(s) 2216
Eco81I CCTNAGG 1 cut(s) 1659
Eco88I CYCGRG 3 cut(s) 788, 818, 1308
EcoNI CCTNNNNNAGG 1 cut(s) 337
EcoO109I RGGNCCY 1 cut(s) 1603
EcoRI GAATTC 1 cut(s) 181
EcoRII CCWGG 5 cut(s) 176, 222, 438, 1732, 2400
EcoRV GATATC 1 cut(s) 676
EcoT14I CCWWGG 4 cut(s) 1146, 1630, 2098, 2487
EcoT22I ATGCAT 2 cut(s) 742, 1215
ErhI CCWWGG 4 cut(s) 1146, 1630, 2098, 2487
Esp3I CGTCTC 1 cut(s) 113
FalI AAGNNNNNCTT 2 cut(s) 2564, 2596
FaqI GGGAC 1 cut(s) 1616
FauI CCCGC 2 cut(s) 603, 2126
FblI GTMKAC 2 cut(s) 1936, 1978
Fnu4HI GCNGC 6 cut(s) 171, 292, 411, 794, 2705, 2744
FokI GGATG 4 cut(s) 377, 430, 2369, 2755
Fsp4HI GCNGC 6 cut(s) 171, 292, 411, 794, 2705, 2744
FspBI CTAG 7 cut(s) 35, 1409, 1503, 1631, 1760, 2099, 2782
GlaI GCGC 4 cut(s) 865, 2041, 2712, 2751
GluI GCNGC 6 cut(s) 171, 292, 411, 794, 2705, 2744
GsaI CCCAGC 1 cut(s) 497
GsuI CTGGAG 1 cut(s) 786
HaeII RGCGCY 1 cut(s) 2753
HaeIII GGCC 4 cut(s) 284, 428, 498, 1007
HapII CCGG 7 cut(s) 56, 362, 1309, 1526, 2350, 2708, 2747
HgaI GACGC 2 cut(s) 153, 1084
HhaI GCGC 4 cut(s) 866, 2042, 2713, 2752
Hin1I GRCGYC 1 cut(s) 2673
Hin6I GCGC 4 cut(s) 864, 2040, 2711, 2750
HinP1I GCGC 4 cut(s) 864, 2040, 2711, 2750
HincII GTYRAC 3 cut(s) 1153, 1851, 2206
HindII GTYRAC 3 cut(s) 1153, 1851, 2206
HindIII AAGCTT 1 cut(s) 1913
HpaII CCGG 7 cut(s) 56, 362, 1309, 1526, 2350, 2708, 2747
HphI GGTGA 4 cut(s) 191, 1084, 1722, 2723
Hpy166II GTNNAC 9 cut(s) 45, 1153, 1402, 1851, 1937, 1958, 1979, 2206, 2273
Hpy8I GTNNAC 9 cut(s) 45, 1153, 1402, 1851, 1937, 1958, 1979, 2206, 2273
Hpy99I CGWCG 3 cut(s) 152, 2337, 2678
HpyAV CCTTC 6 cut(s) 416, 1115, 1122, 1256, 2155, 2278
HpyCH4III ACNGT 9 cut(s) 49, 69, 641, 1187, 1554, 2173, 2183, 2517, 2761
HpyF10VI GCNNNNNNNGC 5 cut(s) 300, 607, 2046, 2710, 2749
Hsp92I GRCGYC 1 cut(s) 2673
HspAI GCGC 4 cut(s) 864, 2040, 2711, 2750
Kpn2I TCCGGA 1 cut(s) 361
KroI GCCGGC 2 cut(s) 2707, 2746
KroNI GCCGGC 2 cut(s) 2709, 2748
LmnI GCTCC 3 cut(s) 1828, 2656, 2731
Lsp1109I GCAGC 4 cut(s) 182, 278, 397, 780
LweI GCATC 9 cut(s) 452, 727, 889, 1301, 1909, 2128, 2176, 2476, 2777
MabI ACCWGGT 2 cut(s) 222, 1732
MaeI CTAG 7 cut(s) 35, 1409, 1503, 1631, 1760, 2099, 2782
MaeIII GTNAC 8 cut(s) 95, 655, 980, 1072, 1187, 2009, 2173, 2761
MflI RGATCY 5 cut(s) 210, 1432, 1637, 2032, 2262
MhlI GDGCHC 2 cut(s) 1960, 2275
MlyI GAGTC 4 cut(s) 352, 754, 847, 2616
MmeI TCCRAC 5 cut(s) 198, 471, 1161, 2499, 2678
Mph1103I ATGCAT 2 cut(s) 742, 1215
MreI CGCCGGCG 2 cut(s) 2707, 2746
MroI TCCGGA 1 cut(s) 361
MroNI GCCGGC 2 cut(s) 2707, 2746
MroXI GAANNNNTTC 3 cut(s) 57, 1111, 1521
MseI TTAA 9 cut(s) 546, 753, 1437, 1668, 1751, 1917, 2322, 2339, 2363
MspCI CTTAAG 1 cut(s) 1436
MspI CCGG 7 cut(s) 56, 362, 1309, 1526, 2350, 2708, 2747
MspR9I CCNGG 8 cut(s) 178, 224, 440, 1309, 1310, 1734, 2351, 2402
Mva1269I GAATGC 4 cut(s) 139, 293, 328, 1215
MvaI CCWGG 5 cut(s) 178, 224, 440, 1734, 2402
MvnI CGCG 3 cut(s) 147, 2620, 2713
MwoI GCNNNNNNNGC 5 cut(s) 300, 607, 2046, 2710, 2749
NaeI GCCGGC 2 cut(s) 2709, 2748
NciI CCSGG 3 cut(s) 1309, 1310, 2351
NgoMIV GCCGGC 2 cut(s) 2707, 2746
NlaIV GGNNCC 5 cut(s) 308, 427, 1307, 1604, 2652
NmuCI GTSAC 5 cut(s) 1072, 1187, 2009, 2173, 2761
NsiI ATGCAT 2 cut(s) 742, 1215
NspI RCATGY 2 cut(s) 1655, 2372
PaeR7I CTCGAG 1 cut(s) 818
PagI TCATGA 1 cut(s) 1351
PcsI WCGNNNNNNNCGW 2 cut(s) 238, 375
PctI GAATGC 4 cut(s) 139, 293, 328, 1215
PdiI GCCGGC 2 cut(s) 2709, 2748
PdmI GAANNNNTTC 3 cut(s) 57, 1111, 1521
PfeI GAWTC 9 cut(s) 82, 464, 524, 622, 779, 1112, 1314, 1517, 2459
PinAI ACCGGT 1 cut(s) 55
PkrI GCNGC 6 cut(s) 172, 293, 412, 795, 2706, 2745
PleI GAGTC 4 cut(s) 352, 753, 847, 2616
PmaCI CACGTG 1 cut(s) 2216
PmlI CACGTG 1 cut(s) 2216
PpsI GAGTC 4 cut(s) 352, 753, 847, 2616
Ppu21I YACGTR 2 cut(s) 255, 2216
PpuMI RGGWCCY 1 cut(s) 1603
PsiI TTATAA 2 cut(s) 1277, 1464
Psp1406I AACGTT 2 cut(s) 99, 1487
Psp5II RGGWCCY 1 cut(s) 1603
Psp6I CCWGG 5 cut(s) 176, 222, 438, 1732, 2400
PspCI CACGTG 1 cut(s) 2216
PspFI CCCAGC 1 cut(s) 493
PspGI CCWGG 5 cut(s) 176, 222, 438, 1732, 2400
PspN4I GGNNCC 5 cut(s) 308, 427, 1307, 1604, 2652
PspPI GGNCC 5 cut(s) 220, 426, 496, 1305, 1603
PspPPI RGGWCCY 1 cut(s) 1603
PstI CTGCAG 1 cut(s) 1839
PstNI CAGNNNCTG 1 cut(s) 2281
PsuI RGATCY 5 cut(s) 210, 1432, 1637, 2032, 2262
RsaI GTAC 9 cut(s) 44, 816, 1324, 1348, 1421, 1530, 1656, 1772, 2682
RsaNI GTAC 9 cut(s) 43, 815, 1323, 1347, 1420, 1529, 1655, 1771, 2681
SaqAI TTAA 9 cut(s) 546, 753, 1437, 1668, 1751, 1917, 2322, 2339, 2363
SatI GCNGC 6 cut(s) 171, 292, 411, 794, 2705, 2744
Sau96I GGNCC 5 cut(s) 220, 426, 496, 1305, 1603
ScaI AGTACT 1 cut(s) 1348
SchI GAGTC 4 cut(s) 352, 754, 847, 2616
ScrFI CCNGG 8 cut(s) 178, 224, 440, 1309, 1310, 1734, 2351, 2402
SduI GDGCHC 2 cut(s) 1960, 2275
SexAI ACCWGGT 2 cut(s) 222, 1732
SfaNI GCATC 9 cut(s) 452, 727, 889, 1301, 1909, 2128, 2176, 2476, 2777
SfcI CTRYAG 2 cut(s) 1835, 2232
Sfr274I CTCGAG 1 cut(s) 818
SgrAI CRCCGGYG 2 cut(s) 2707, 2746
SinI GGWCC 3 cut(s) 220, 1305, 1603
SlaI CTCGAG 1 cut(s) 818
SmaI CCCGGG 1 cut(s) 1310
SmlI CTYRAG 4 cut(s) 334, 818, 1436, 2020
SmoI CTYRAG 4 cut(s) 334, 818, 1436, 2020
SspMI CTAG 7 cut(s) 35, 1409, 1503, 1631, 1760, 2099, 2782
StyD4I CCNGG 8 cut(s) 176, 222, 438, 1307, 1308, 1732, 2349, 2400
StyI CCWWGG 4 cut(s) 1146, 1630, 2098, 2487
TaaI ACNGT 9 cut(s) 49, 69, 641, 1187, 1554, 2173, 2183, 2517, 2761
TatI WGTACW 5 cut(s) 42, 1322, 1346, 1770, 2680
TauI GCSGC 2 cut(s) 2707, 2746
TfiI GAWTC 9 cut(s) 82, 464, 524, 622, 779, 1112, 1314, 1517, 2459
Tru1I TTAA 9 cut(s) 546, 753, 1437, 1668, 1751, 1917, 2322, 2339, 2363
Tru9I TTAA 9 cut(s) 546, 753, 1437, 1668, 1751, 1917, 2322, 2339, 2363
TscAI CASTG 8 cut(s) 634, 1192, 1335, 1557, 2262, 2316, 2632, 2639
TseFI GTSAC 5 cut(s) 1072, 1187, 2009, 2173, 2761
TseI GCWGC 4 cut(s) 170, 291, 410, 793
Tsp45I GTSAC 5 cut(s) 1072, 1187, 2009, 2173, 2761
TspGWI ACGGA 3 cut(s) 1299, 1437, 1624
TspMI CCCGGG 1 cut(s) 1308
TspRI CASTG 8 cut(s) 634, 1192, 1335, 1557, 2262, 2316, 2632, 2639
Vha464I CTTAAG 1 cut(s) 1436
VneI GTGCAC 2 cut(s) 1956, 2271
VpaK11BI GGWCC 3 cut(s) 220, 1305, 1603
XagI CCTNNNNNAGG 1 cut(s) 337
XapI RAATTY 5 cut(s) 181, 457, 707, 1664, 1696
XbaI TCTAGA 1 cut(s) 1502
XceI RCATGY 2 cut(s) 1655, 2372
XhoI CTCGAG 1 cut(s) 818
XmaI CCCGGG 1 cut(s) 1308
XmaJI CCTAGG 2 cut(s) 1630, 2098
XmiI GTMKAC 2 cut(s) 1936, 1978
XmnI GAANNNNTTC 3 cut(s) 57, 1111, 1521
XspI CTAG 7 cut(s) 35, 1409, 1503, 1631, 1760, 2099, 2782
ZraI GACGTC 1 cut(s) 2674
ZrmI AGTACT 1 cut(s) 1348
Zsp2I ATGCAT 2 cut(s) 742, 1215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.